Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28079.t1 | XP_013442186.1 | 99.8 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.00E+00 | 1223.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28079.t1 | Q6DGE9 | 37.5 | 88 | 52 | 1 | 408 | 495 | 12 | 96 | 8.4e-07 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28079.t1 | A0A072TG43 | 99.8 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0e+00 | 1223.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene28079 | 0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene050009 | MS.gene28079 | 0.804323 | 2.28E-49 | -1.69E-46 |
| MS.gene050071 | MS.gene28079 | 0.80887 | 2.50E-50 | -1.69E-46 |
| MS.gene050297 | MS.gene28079 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene050818 | MS.gene28079 | 0.825596 | 4.30E-54 | -1.69E-46 |
| MS.gene050894 | MS.gene28079 | 0.829692 | 4.47E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene28079 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene054585 | MS.gene28079 | 0.802385 | 5.75E-49 | -1.69E-46 |
| MS.gene054999 | MS.gene28079 | 0.829988 | 3.78E-55 | -1.69E-46 |
| MS.gene055251 | MS.gene28079 | 0.850084 | 2.13E-60 | -1.69E-46 |
| MS.gene055331 | MS.gene28079 | 0.852235 | 5.27E-61 | -1.69E-46 |
| MS.gene056266 | MS.gene28079 | -0.835516 | 1.60E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene28079 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene28079 | 0.824847 | 6.46E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28079.t1 | MTR_0276s0010 | 99.834 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0 | 1250 |
| MS.gene28079.t1 | MTR_3g102680 | 51.532 | 555 | 255 | 6 | 8 | 556 | 36 | 582 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28079.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene28079.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene28079.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene28079.t1 | AT5G43120 | 45.361 | 582 | 294 | 9 | 11 | 581 | 23 | 591 | 2.56e-174 | 508 |
| MS.gene28079.t1 | AT5G43120 | 46.570 | 554 | 272 | 9 | 11 | 553 | 23 | 563 | 1.26e-173 | 506 |
| MS.gene28079.t1 | AT3G50030 | 43.173 | 542 | 246 | 8 | 8 | 544 | 9 | 493 | 3.58e-139 | 414 |
Find 152 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATCTGGAAATATTTC+TGG | 0.102747 | 4.4:+10683708 | MS.gene28079:CDS |
| TTTACCTTGTGACATGTATT+TGG | 0.181144 | 4.4:-10682681 | None:intergenic |
| AATAAGGAATGTATATATTT+TGG | 0.230293 | 4.4:-10682002 | None:intergenic |
| AACTAATCGCTCAGCGTAAT+CGG | 0.242598 | 4.4:-10684042 | None:intergenic |
| GTTAGCAAAAGAAAGTTTAT+TGG | 0.248766 | 4.4:+10683947 | MS.gene28079:CDS |
| CCAAGGAACTCATTGCTAAT+TGG | 0.253973 | 4.4:-10682242 | None:intergenic |
| TGCTCGCCTCCAGAGACTTT+TGG | 0.259141 | 4.4:-10683904 | None:intergenic |
| ATTCCCAGCTCTATGAATTC+AGG | 0.267825 | 4.4:-10681916 | None:intergenic |
| CACCACCGTCACCCTGATTA+TGG | 0.279873 | 4.4:-10684124 | None:intergenic |
| GTTCGAAGCAGAGATTAAAA+TGG | 0.285308 | 4.4:+10683607 | MS.gene28079:CDS |
| GAGAACAACTCTCTCCTTCT+TGG | 0.301124 | 4.4:-10683778 | None:intergenic |
| ATGATATGAGCTGCATAATA+AGG | 0.301312 | 4.4:-10682018 | None:intergenic |
| TGGCTATTGATTGTCTTCTA+TGG | 0.301791 | 4.4:+10682646 | MS.gene28079:CDS |
| TTCTCCCTATCAGTGGTCTT+TGG | 0.309537 | 4.4:+10681866 | MS.gene28079:CDS |
| GACAGCTAGTGAAAGTGATA+TGG | 0.315697 | 4.4:+10684184 | MS.gene28079:CDS |
| GCATGGTGGCGTCCATAATC+AGG | 0.330107 | 4.4:+10684112 | MS.gene28079:CDS |
| CTTAATATGTAGATCTTCCT+TGG | 0.340124 | 4.4:-10683643 | None:intergenic |
| TGGTTCCTACACAATGAATA+TGG | 0.343437 | 4.4:+10682041 | MS.gene28079:CDS |
| TTCAGATGATTGGCAGTATA+TGG | 0.344104 | 4.4:+10682626 | MS.gene28079:CDS |
| TTTACCAATATGTTGATAGA+AGG | 0.350454 | 4.4:+10682283 | MS.gene28079:CDS |
| GAGGGTAGCAGTTAGAGCTT+TGG | 0.371302 | 4.4:+10682149 | MS.gene28079:CDS |
| TATTATGCAGCTCATATCAT+TGG | 0.378316 | 4.4:+10682021 | MS.gene28079:CDS |
| CGGCATGGGCGGTGTTGAAA+TGG | 0.381441 | 4.4:+10682335 | MS.gene28079:CDS |
| TTAGCCTTCTATCAACATAT+TGG | 0.382403 | 4.4:-10682287 | None:intergenic |
| GAAAATTCACCAGCTGGTAT+TGG | 0.383617 | 4.4:+10682510 | MS.gene28079:CDS |
| TAGAAATTCTTGCTTGCATA+TGG | 0.385235 | 4.4:-10682451 | None:intergenic |
| GTCTAGGAAGGCCGAGGAAT+GGG | 0.391308 | 4.4:+10682359 | MS.gene28079:CDS |
| AGGGTAGCAGTTAGAGCTTT+GGG | 0.392182 | 4.4:+10682150 | MS.gene28079:CDS |
| CATATGGTAGGAAGAAATTC+CGG | 0.398197 | 4.4:-10682435 | None:intergenic |
| TTGCTCGCTCTTCAGATGAT+TGG | 0.408759 | 4.4:+10682616 | MS.gene28079:CDS |
| TTCTAAGAGGTAGGTTGACT+TGG | 0.413383 | 4.4:+10682118 | MS.gene28079:CDS |
| CTCGAGAATTTCACCGTGAC+TGG | 0.417747 | 4.4:-10682211 | None:intergenic |
| CCAATTAGCAATGAGTTCCT+TGG | 0.422140 | 4.4:+10682242 | MS.gene28079:CDS |
| CACAATGCTTCAATAATTCC+AGG | 0.425354 | 4.4:-10682588 | None:intergenic |
| ACTAATCGCTCAGCGTAATC+GGG | 0.426153 | 4.4:-10684041 | None:intergenic |
| ATCGTCATGCCAAAAGTCTC+TGG | 0.426995 | 4.4:+10683895 | MS.gene28079:CDS |
| AATGCATGTCTGCTCTCATA+TGG | 0.429025 | 4.4:+10681944 | MS.gene28079:CDS |
| ACACTTGCTCTGCGTTTGCT+TGG | 0.430357 | 4.4:-10681796 | None:intergenic |
| GTGTTCCAAAGACCACTGAT+AGG | 0.430593 | 4.4:-10681871 | None:intergenic |
| AAATATTTCCAGATGAGAAA+AGG | 0.437915 | 4.4:-10683704 | None:intergenic |
| TGCACGGGTAGCATCACTTA+TGG | 0.449721 | 4.4:-10683850 | None:intergenic |
| CGACGATGACAGGAAAGAAT+AGG | 0.453401 | 4.4:+10684250 | MS.gene28079:CDS |
| GGACCTGTTGCTAGTTGCCC+TGG | 0.461427 | 4.4:+10682570 | MS.gene28079:CDS |
| GGTGACGGTGGTGATATATA+TGG | 0.463445 | 4.4:+10684134 | MS.gene28079:CDS |
| GAGTTGTTCTCTATAGCAAT+CGG | 0.470290 | 4.4:+10683790 | MS.gene28079:CDS |
| CCTTTAGTTGAGCTTCTAAG+AGG | 0.473520 | 4.4:+10682105 | MS.gene28079:CDS |
| TATGTAGGTAATTGATAAAG+TGG | 0.475329 | 4.4:+10683425 | MS.gene28079:intron |
| GCACTGGTTGTCAAGCTTGA+AGG | 0.477662 | 4.4:+10683675 | MS.gene28079:CDS |
| AATATTTCCAGATGAGAAAA+GGG | 0.478637 | 4.4:-10683703 | None:intergenic |
| GTTAATGAAAATTCACCAGC+TGG | 0.484392 | 4.4:+10682504 | MS.gene28079:CDS |
| TGACCCTGAATTCATAGAGC+TGG | 0.484686 | 4.4:+10681912 | MS.gene28079:CDS |
| TTCGAAGCAGAGATTAAAAT+GGG | 0.485000 | 4.4:+10683608 | MS.gene28079:CDS |
| AGAGATCAGGATCATTTGAC+TGG | 0.487652 | 4.4:-10683998 | None:intergenic |
| TATTAAGCAGGCTGCAGCAC+TGG | 0.488628 | 4.4:+10683659 | MS.gene28079:CDS |
| TTCCCAGCTCTATGAATTCA+GGG | 0.490784 | 4.4:-10681915 | None:intergenic |
| ATTCCAGGGCAACTAGCAAC+AGG | 0.491637 | 4.4:-10682573 | None:intergenic |
| CATTCCGAGTCATCAGTCTC+TGG | 0.491761 | 4.4:-10684158 | None:intergenic |
| CAAAAGAAGCATCCTGGGTA+TGG | 0.491996 | 4.4:-10681754 | None:intergenic |
| GTGATGATGACGACGGTGAT+TGG | 0.495143 | 4.4:+10684222 | MS.gene28079:CDS |
| TTAATATGTAGATCTTCCTT+GGG | 0.495234 | 4.4:-10683642 | None:intergenic |
| GTGTCAAGATGATGATGGTC+AGG | 0.496111 | 4.4:+10681843 | MS.gene28079:CDS |
| GGGCTAGCCAACTGCAATGT+TGG | 0.498049 | 4.4:+10682379 | MS.gene28079:CDS |
| TGCATCGAGACACAAGGGTC+GGG | 0.498166 | 4.4:+10683534 | MS.gene28079:CDS |
| TCTATGAATTCAGGGTCATT+CGG | 0.498186 | 4.4:-10681907 | None:intergenic |
| ACAATTTGTCATCAGAAGCT+TGG | 0.499520 | 4.4:+10682543 | MS.gene28079:CDS |
| GAAAGTGATATGGGAAATGA+TGG | 0.499970 | 4.4:+10684194 | MS.gene28079:CDS |
| TGATCTTCTTACACGCGGCA+TGG | 0.501426 | 4.4:+10682320 | MS.gene28079:CDS |
| AGAGACTGATGACTCGGAAT+GGG | 0.505401 | 4.4:+10684160 | MS.gene28079:CDS |
| ATGACACAAAAGAAGCATCC+TGG | 0.509285 | 4.4:-10681760 | None:intergenic |
| ACAGCTAGTGAAAGTGATAT+GGG | 0.510559 | 4.4:+10684185 | MS.gene28079:CDS |
| CTCTCCTTCTTGGATCTCAT+AGG | 0.510858 | 4.4:-10683768 | None:intergenic |
| TTCACCGTGACTGGCTAAAG+TGG | 0.511711 | 4.4:-10682202 | None:intergenic |
| GGCTAAAGTGGGAAAAGTGC+TGG | 0.517032 | 4.4:-10682190 | None:intergenic |
| GTTGACTTGGGTTGAGCAGA+GGG | 0.523039 | 4.4:+10682131 | MS.gene28079:CDS |
| CAGAGACTGATGACTCGGAA+TGG | 0.524761 | 4.4:+10684159 | MS.gene28079:CDS |
| GACCCTGAATTCATAGAGCT+GGG | 0.530003 | 4.4:+10681913 | MS.gene28079:CDS |
| AGAAGCAGATGCGTGCTGCT+TGG | 0.530091 | 4.4:+10684066 | MS.gene28079:CDS |
| CTTAATAAGCCAATACCAGC+TGG | 0.532024 | 4.4:-10682519 | None:intergenic |
| ATTGGAATAACGACGATGAC+AGG | 0.533512 | 4.4:+10684240 | MS.gene28079:CDS |
| GGAAGATCTACATATTAAGC+AGG | 0.534911 | 4.4:+10683647 | MS.gene28079:CDS |
| TTCTTCCATATTCATTGTGT+AGG | 0.537968 | 4.4:-10682046 | None:intergenic |
| TTTGTCATCAGAAGCTTGGT+AGG | 0.539277 | 4.4:+10682547 | MS.gene28079:CDS |
| GCACAAGCTTATGACATGCT+AGG | 0.540972 | 4.4:+10683924 | MS.gene28079:CDS |
| CTTCTTACACGCGGCATGGG+CGG | 0.541650 | 4.4:+10682324 | MS.gene28079:CDS |
| TCCGCAAGGTCAACTAATGC+AGG | 0.542050 | 4.4:-10683450 | None:intergenic |
| CCTCTTAGAAGCTCAACTAA+AGG | 0.542272 | 4.4:-10682105 | None:intergenic |
| GATATGGGAAATGATGGAAT+TGG | 0.542389 | 4.4:+10684200 | MS.gene28079:CDS |
| GATCTTCTTACACGCGGCAT+GGG | 0.543576 | 4.4:+10682321 | MS.gene28079:CDS |
| TCTAAGAGGTAGGTTGACTT+GGG | 0.544283 | 4.4:+10682119 | MS.gene28079:CDS |
| ATCAAAATACTCAGAAGCAT+TGG | 0.544343 | 4.4:+10683737 | MS.gene28079:CDS |
| CACAAGCTTATGACATGCTA+GGG | 0.553569 | 4.4:+10683925 | MS.gene28079:CDS |
| TTGTCATCAGAAGCTTGGTA+GGG | 0.554096 | 4.4:+10682548 | MS.gene28079:CDS |
| TGCTGCTTGGTTATTTCGAG+AGG | 0.554603 | 4.4:+10684079 | MS.gene28079:CDS |
| TAACAAAACTACCTGGCATG+TGG | 0.556418 | 4.4:+10682472 | MS.gene28079:CDS |
| AACAAAACTACCTGGCATGT+GGG | 0.557380 | 4.4:+10682473 | MS.gene28079:CDS |
| ACAAGACCACCCCACATGCC+AGG | 0.559253 | 4.4:-10682483 | None:intergenic |
| AGTCTAGGAAGGCCGAGGAA+TGG | 0.560531 | 4.4:+10682358 | MS.gene28079:CDS |
| CAAGATTGCATCGAGACACA+AGG | 0.563325 | 4.4:+10683528 | MS.gene28079:CDS |
| AGTTGTTCTCTATAGCAATC+GGG | 0.563923 | 4.4:+10683791 | MS.gene28079:CDS |
| TCGCACTAAAGAACAGATAG+AGG | 0.568924 | 4.4:+10683575 | MS.gene28079:CDS |
| CTTGCGGAGATTACAACTCT+AGG | 0.571036 | 4.4:+10683465 | MS.gene28079:CDS |
| TGTTCCAAAGACCACTGATA+GGG | 0.571674 | 4.4:-10681870 | None:intergenic |
| ATCTTGAAGAACACTGACAA+TGG | 0.574244 | 4.4:-10683511 | None:intergenic |
| TGTCATCAGAAGCTTGGTAG+GGG | 0.574943 | 4.4:+10682549 | MS.gene28079:CDS |
| TAGTTGAGCTTCTAAGAGGT+AGG | 0.575441 | 4.4:+10682109 | MS.gene28079:CDS |
| GTCTGTGGAGACATAGTGCA+CGG | 0.575568 | 4.4:-10683866 | None:intergenic |
| GGCGTCCATAATCAGGGTGA+CGG | 0.576294 | 4.4:+10684119 | MS.gene28079:CDS |
| GCAGAAAGTTCTGTGCATGC+TGG | 0.577817 | 4.4:+10682072 | MS.gene28079:CDS |
| CACTGTGATCTTCTTACACG+CGG | 0.580191 | 4.4:+10682315 | MS.gene28079:CDS |
| TGACACAAAAGAAGCATCCT+GGG | 0.582906 | 4.4:-10681759 | None:intergenic |
| AATTCTTGCTTGCATATGGT+AGG | 0.583132 | 4.4:-10682447 | None:intergenic |
| CGAGAGGCAGCTGTTAAGCA+TGG | 0.584903 | 4.4:+10684095 | MS.gene28079:CDS |
| GGTTGACTTGGGTTGAGCAG+AGG | 0.586421 | 4.4:+10682130 | MS.gene28079:CDS |
| CTTAGAAGCTCAACTAAAGG+AGG | 0.588830 | 4.4:-10682102 | None:intergenic |
| GAAGAGACCAACATTGCAGT+TGG | 0.590523 | 4.4:-10682386 | None:intergenic |
| CATGGTGGCGTCCATAATCA+GGG | 0.591600 | 4.4:+10684113 | MS.gene28079:CDS |
| AAGCATGGATAAAGTTTCAT+CGG | 0.592980 | 4.4:+10681726 | None:intergenic |
| GCGGTGTTGAAATGGAGTCT+AGG | 0.598414 | 4.4:+10682343 | MS.gene28079:CDS |
| CAGTTGGCTAGCCCATTCCT+CGG | 0.603223 | 4.4:-10682370 | None:intergenic |
| CTTCCGTGTCAAGATGATGA+TGG | 0.604349 | 4.4:+10681838 | MS.gene28079:CDS |
| TTGCATCGAGACACAAGGGT+CGG | 0.605332 | 4.4:+10683533 | MS.gene28079:CDS |
| TGTTGAAATGGAGTCTAGGA+AGG | 0.605706 | 4.4:+10682347 | MS.gene28079:CDS |
| GTGTCCTATGAGATCCAAGA+AGG | 0.606913 | 4.4:+10683764 | MS.gene28079:CDS |
| ACAATGCTTCAATAATTCCA+GGG | 0.608618 | 4.4:-10682587 | None:intergenic |
| GTGTGAATAAACTATTTCCA+AGG | 0.609966 | 4.4:-10682259 | None:intergenic |
| TTTCCCACTTTAGCCAGTCA+CGG | 0.611995 | 4.4:+10682198 | MS.gene28079:CDS |
| ACAAAACTACCTGGCATGTG+GGG | 0.615879 | 4.4:+10682474 | MS.gene28079:CDS |
| GGTCAGGTTCTCCCTATCAG+TGG | 0.617990 | 4.4:+10681859 | MS.gene28079:CDS |
| ATGTCTGCTCTCATATGGAA+AGG | 0.618281 | 4.4:+10681949 | MS.gene28079:CDS |
| AATGGAGTCTAGGAAGGCCG+AGG | 0.620005 | 4.4:+10682353 | MS.gene28079:CDS |
| GCATCACTTATGGCAGCCAA+AGG | 0.625977 | 4.4:-10683840 | None:intergenic |
| TCACCGTGACTGGCTAAAGT+GGG | 0.627571 | 4.4:-10682201 | None:intergenic |
| GAGATCAGGATCATTTGACT+GGG | 0.629493 | 4.4:-10683997 | None:intergenic |
| AAGGACTGAAGAATCGACGC+TGG | 0.632880 | 4.4:+10681968 | MS.gene28079:CDS |
| TGGTCCAGAGACTGATGACT+CGG | 0.634939 | 4.4:+10684154 | MS.gene28079:CDS |
| AAACTACCTGGCATGTGGGG+TGG | 0.640971 | 4.4:+10682477 | MS.gene28079:CDS |
| TGGTCTTTGGAACACAGCAA+TGG | 0.643301 | 4.4:+10681879 | MS.gene28079:CDS |
| GAATTTCTAACAAAACTACC+TGG | 0.643669 | 4.4:+10682465 | MS.gene28079:CDS |
| ATGGGAAAAGAATATGCCCA+AGG | 0.649974 | 4.4:+10683626 | MS.gene28079:CDS |
| GTCCATAATCAGGGTGACGG+TGG | 0.652767 | 4.4:+10684122 | MS.gene28079:CDS |
| TCATCGGACTGTCCATACCC+AGG | 0.655137 | 4.4:+10681742 | MS.gene28079:CDS |
| CTAGAGTTGTAATCTCCGCA+AGG | 0.661496 | 4.4:-10683464 | None:intergenic |
| GCCTGCATTAGTTGACCTTG+CGG | 0.662681 | 4.4:+10683449 | MS.gene28079:CDS |
| AGATCCAAATACATGTCACA+AGG | 0.671859 | 4.4:+10682677 | MS.gene28079:CDS |
| TCTGTGGAGACATAGTGCAC+GGG | 0.677330 | 4.4:-10683865 | None:intergenic |
| GAGGCAGCTGTTAAGCATGG+TGG | 0.678228 | 4.4:+10684098 | MS.gene28079:CDS |
| GTCATGCCAAAAGTCTCTGG+AGG | 0.684030 | 4.4:+10683898 | MS.gene28079:CDS |
| AAGATTGCATCGAGACACAA+GGG | 0.684193 | 4.4:+10683529 | MS.gene28079:CDS |
| CATGACGATTGACAGGTCTG+TGG | 0.690518 | 4.4:-10683881 | None:intergenic |
| TGACCATCATCATCTTGACA+CGG | 0.697231 | 4.4:-10681841 | None:intergenic |
| ATGATCCTGATCTCTCACTG+AGG | 0.765682 | 4.4:+10684006 | MS.gene28079:CDS |
| GGAATTGGTGATGATGACGA+CGG | 0.787281 | 4.4:+10684215 | MS.gene28079:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATAAAACAAAGAA+AGG | - | chr4.4:10683123-10683142 | None:intergenic | 10.0% |
| !! | ATTCATTTAGAAATAAAAGT+AGG | + | chr4.4:10682937-10682956 | MS.gene28079:intron | 15.0% |
| !!! | AATAAGGAATGTATATATTT+TGG | - | chr4.4:10682005-10682024 | None:intergenic | 15.0% |
| !! | ACTTTAATTCATCTAGAAAT+TGG | + | chr4.4:10682866-10682885 | MS.gene28079:intron | 20.0% |
| ! | AAATATTTCCAGATGAGAAA+AGG | - | chr4.4:10683707-10683726 | None:intergenic | 25.0% |
| ! | AATATTTCCAGATGAGAAAA+GGG | - | chr4.4:10683706-10683725 | None:intergenic | 25.0% |
| ! | ATGAAAGCAATGATCAAATA+AGG | - | chr4.4:10683318-10683337 | None:intergenic | 25.0% |
| ! | CATCTAAAAACATTGATGTA+TGG | + | chr4.4:10683159-10683178 | MS.gene28079:intron | 25.0% |
| ! | GTTAGCAAAAGAAAGTTTAT+TGG | + | chr4.4:10683947-10683966 | MS.gene28079:CDS | 25.0% |
| ! | TATGTAGGTAATTGATAAAG+TGG | + | chr4.4:10683425-10683444 | MS.gene28079:intron | 25.0% |
| ! | TTAATATGTAGATCTTCCTT+GGG | - | chr4.4:10683645-10683664 | None:intergenic | 25.0% |
| !! | TTTACCAATATGTTGATAGA+AGG | + | chr4.4:10682283-10682302 | MS.gene28079:CDS | 25.0% |
| !!! | TAATTGCTTTGCTTTTAAAC+CGG | + | chr4.4:10682416-10682435 | MS.gene28079:CDS | 25.0% |
| AAAGCAATGATCAAATAAGG+AGG | - | chr4.4:10683315-10683334 | None:intergenic | 30.0% | |
| ACAATGCTTCAATAATTCCA+GGG | - | chr4.4:10682590-10682609 | None:intergenic | 30.0% | |
| ATGATATGAGCTGCATAATA+AGG | - | chr4.4:10682021-10682040 | None:intergenic | 30.0% | |
| ATGTATATATCTCGTAGTGA+AGG | - | chr4.4:10683003-10683022 | None:intergenic | 30.0% | |
| ATTTGCACTCTTGAACATTA+AGG | + | chr4.4:10682767-10682786 | MS.gene28079:intron | 30.0% | |
| ATTTGTTTACTTTAACGCCT+TGG | + | chr4.4:10683395-10683414 | MS.gene28079:intron | 30.0% | |
| CTTAAACTTAGTTATCACTG+CGG | + | chr4.4:10683218-10683237 | MS.gene28079:intron | 30.0% | |
| CTTAATATGTAGATCTTCCT+TGG | - | chr4.4:10683646-10683665 | None:intergenic | 30.0% | |
| GAAAAGGAGAAAACAAAGAA+AGG | + | chr4.4:10683063-10683082 | MS.gene28079:intron | 30.0% | |
| GAATTTCTAACAAAACTACC+TGG | + | chr4.4:10682465-10682484 | MS.gene28079:CDS | 30.0% | |
| GTGTGAATAAACTATTTCCA+AGG | - | chr4.4:10682262-10682281 | None:intergenic | 30.0% | |
| TACCTACATAATATATGCCA+AGG | - | chr4.4:10683415-10683434 | None:intergenic | 30.0% | |
| TAGAAATTCTTGCTTGCATA+TGG | - | chr4.4:10682454-10682473 | None:intergenic | 30.0% | |
| TATTATGCAGCTCATATCAT+TGG | + | chr4.4:10682021-10682040 | MS.gene28079:CDS | 30.0% | |
| TTCGAAGCAGAGATTAAAAT+GGG | + | chr4.4:10683608-10683627 | MS.gene28079:CDS | 30.0% | |
| TTCTCATCTGGAAATATTTC+TGG | + | chr4.4:10683708-10683727 | MS.gene28079:CDS | 30.0% | |
| TTCTTCCATATTCATTGTGT+AGG | - | chr4.4:10682049-10682068 | None:intergenic | 30.0% | |
| TTTACCTTGTGACATGTATT+TGG | - | chr4.4:10682684-10682703 | None:intergenic | 30.0% | |
| ! | AAGAGTGCAAATGAATACAT+TGG | - | chr4.4:10682759-10682778 | None:intergenic | 30.0% |
| ! | ATCAAAATACTCAGAAGCAT+TGG | + | chr4.4:10683737-10683756 | MS.gene28079:CDS | 30.0% |
| ! | TTAGCCTTCTATCAACATAT+TGG | - | chr4.4:10682290-10682309 | None:intergenic | 30.0% |
| ! | TTCTGTTTCTTAGTGTGAAA+AGG | + | chr4.4:10683047-10683066 | MS.gene28079:intron | 30.0% |
| AATTCTTGCTTGCATATGGT+AGG | - | chr4.4:10682450-10682469 | None:intergenic | 35.0% | |
| ACAATTTGTCATCAGAAGCT+TGG | + | chr4.4:10682543-10682562 | MS.gene28079:CDS | 35.0% | |
| ACAGCTAGTGAAAGTGATAT+GGG | + | chr4.4:10684185-10684204 | MS.gene28079:CDS | 35.0% | |
| ACTCAACAGTCTACAGAAAT+CGG | - | chr4.4:10683351-10683370 | None:intergenic | 35.0% | |
| AGATCCAAATACATGTCACA+AGG | + | chr4.4:10682677-10682696 | MS.gene28079:CDS | 35.0% | |
| AGTTGTTCTCTATAGCAATC+GGG | + | chr4.4:10683791-10683810 | MS.gene28079:CDS | 35.0% | |
| ATCTTGAAGAACACTGACAA+TGG | - | chr4.4:10683514-10683533 | None:intergenic | 35.0% | |
| CACAATGCTTCAATAATTCC+AGG | - | chr4.4:10682591-10682610 | None:intergenic | 35.0% | |
| CATATGGTAGGAAGAAATTC+CGG | - | chr4.4:10682438-10682457 | None:intergenic | 35.0% | |
| CTAGGTGATCATAAAAAGCT+TGG | + | chr4.4:10683483-10683502 | MS.gene28079:CDS | 35.0% | |
| GAAAGTGATATGGGAAATGA+TGG | + | chr4.4:10684194-10684213 | MS.gene28079:CDS | 35.0% | |
| GAACAAATGCAAGGTTACAA+AGG | - | chr4.4:10682708-10682727 | None:intergenic | 35.0% | |
| GAGTTGTTCTCTATAGCAAT+CGG | + | chr4.4:10683790-10683809 | MS.gene28079:CDS | 35.0% | |
| GGAAGATCTACATATTAAGC+AGG | + | chr4.4:10683647-10683666 | MS.gene28079:CDS | 35.0% | |
| GTTAATGAAAATTCACCAGC+TGG | + | chr4.4:10682504-10682523 | MS.gene28079:CDS | 35.0% | |
| GTTCGAAGCAGAGATTAAAA+TGG | + | chr4.4:10683607-10683626 | MS.gene28079:CDS | 35.0% | |
| TATATACATATCACACCGCT+TGG | + | chr4.4:10683014-10683033 | MS.gene28079:intron | 35.0% | |
| TCTATGAATTCAGGGTCATT+CGG | - | chr4.4:10681910-10681929 | None:intergenic | 35.0% | |
| TGGTTCCTACACAATGAATA+TGG | + | chr4.4:10682041-10682060 | MS.gene28079:CDS | 35.0% | |
| TTCAGATGATTGGCAGTATA+TGG | + | chr4.4:10682626-10682645 | MS.gene28079:CDS | 35.0% | |
| ! | AAATTGGCTTAGCATGTGAA+TGG | + | chr4.4:10682882-10682901 | MS.gene28079:intron | 35.0% |
| ! | ATGCTTCTTTTGTGTCATGA+AGG | + | chr4.4:10681765-10681784 | MS.gene28079:CDS | 35.0% |
| ! | CAGTCTGTAGCTTTTCATTT+AGG | + | chr4.4:10682971-10682990 | MS.gene28079:intron | 35.0% |
| ! | GATATGGGAAATGATGGAAT+TGG | + | chr4.4:10684200-10684219 | MS.gene28079:CDS | 35.0% |
| ! | TGGCTATTGATTGTCTTCTA+TGG | + | chr4.4:10682646-10682665 | MS.gene28079:CDS | 35.0% |
| AACAAAACTACCTGGCATGT+GGG | + | chr4.4:10682473-10682492 | MS.gene28079:CDS | 40.0% | |
| AACTAATCGCTCAGCGTAAT+CGG | - | chr4.4:10684045-10684064 | None:intergenic | 40.0% | |
| AAGATTGCATCGAGACACAA+GGG | + | chr4.4:10683529-10683548 | MS.gene28079:CDS | 40.0% | |
| AATGCATGTCTGCTCTCATA+TGG | + | chr4.4:10681944-10681963 | MS.gene28079:CDS | 40.0% | |
| ACTGTTGAGTTCTCTTCACT+AGG | + | chr4.4:10683361-10683380 | MS.gene28079:intron | 40.0% | |
| AGAGATCAGGATCATTTGAC+TGG | - | chr4.4:10684001-10684020 | None:intergenic | 40.0% | |
| ATGGGAAAAGAATATGCCCA+AGG | + | chr4.4:10683626-10683645 | MS.gene28079:CDS | 40.0% | |
| ATGTCTGCTCTCATATGGAA+AGG | + | chr4.4:10681949-10681968 | MS.gene28079:CDS | 40.0% | |
| ATTCCCAGCTCTATGAATTC+AGG | - | chr4.4:10681919-10681938 | None:intergenic | 40.0% | |
| ATTGGAATAACGACGATGAC+AGG | + | chr4.4:10684240-10684259 | MS.gene28079:CDS | 40.0% | |
| CAAACATGTGAGTCCAAACA+TGG | - | chr4.4:10683254-10683273 | None:intergenic | 40.0% | |
| CACAAGCTTATGACATGCTA+GGG | + | chr4.4:10683925-10683944 | MS.gene28079:CDS | 40.0% | |
| CAGAAATATGTCACACCAAG+CGG | - | chr4.4:10683032-10683051 | None:intergenic | 40.0% | |
| CATGTTTGGACTCACATGTT+TGG | + | chr4.4:10683252-10683271 | MS.gene28079:intron | 40.0% | |
| CCAAGGAACTCATTGCTAAT+TGG | - | chr4.4:10682245-10682264 | None:intergenic | 40.0% | |
| CCAATTAGCAATGAGTTCCT+TGG | + | chr4.4:10682242-10682261 | MS.gene28079:CDS | 40.0% | |
| CCTCTTAGAAGCTCAACTAA+AGG | - | chr4.4:10682108-10682127 | None:intergenic | 40.0% | |
| CCTTTAGTTGAGCTTCTAAG+AGG | + | chr4.4:10682105-10682124 | MS.gene28079:CDS | 40.0% | |
| CGCCTTGGCATATATTATGT+AGG | + | chr4.4:10683410-10683429 | MS.gene28079:intron | 40.0% | |
| CTGTTGAGTTCTCTTCACTA+GGG | + | chr4.4:10683362-10683381 | MS.gene28079:intron | 40.0% | |
| CTTAATAAGCCAATACCAGC+TGG | - | chr4.4:10682522-10682541 | None:intergenic | 40.0% | |
| CTTAGAAGCTCAACTAAAGG+AGG | - | chr4.4:10682105-10682124 | None:intergenic | 40.0% | |
| GAAAATTCACCAGCTGGTAT+TGG | + | chr4.4:10682510-10682529 | MS.gene28079:CDS | 40.0% | |
| GACAGCTAGTGAAAGTGATA+TGG | + | chr4.4:10684184-10684203 | MS.gene28079:CDS | 40.0% | |
| GAGATCAGGATCATTTGACT+GGG | - | chr4.4:10684000-10684019 | None:intergenic | 40.0% | |
| TAACAAAACTACCTGGCATG+TGG | + | chr4.4:10682472-10682491 | MS.gene28079:CDS | 40.0% | |
| TCATGATTCAGCTCATGTGT+AGG | + | chr4.4:10683192-10683211 | MS.gene28079:intron | 40.0% | |
| TCGCACTAAAGAACAGATAG+AGG | + | chr4.4:10683575-10683594 | MS.gene28079:CDS | 40.0% | |
| TGACCATCATCATCTTGACA+CGG | - | chr4.4:10681844-10681863 | None:intergenic | 40.0% | |
| TGTAACCTTGCATTTGTTCC+TGG | + | chr4.4:10682709-10682728 | MS.gene28079:intron | 40.0% | |
| TGTTCCAAAGACCACTGATA+GGG | - | chr4.4:10681873-10681892 | None:intergenic | 40.0% | |
| TGTTGAAATGGAGTCTAGGA+AGG | + | chr4.4:10682347-10682366 | MS.gene28079:CDS | 40.0% | |
| TTCCCAGCTCTATGAATTCA+GGG | - | chr4.4:10681918-10681937 | None:intergenic | 40.0% | |
| TTGTCATCAGAAGCTTGGTA+GGG | + | chr4.4:10682548-10682567 | MS.gene28079:CDS | 40.0% | |
| TTTGTCATCAGAAGCTTGGT+AGG | + | chr4.4:10682547-10682566 | MS.gene28079:CDS | 40.0% | |
| ! | GGAAATTCCCTTTTCTCATC+TGG | + | chr4.4:10683696-10683715 | MS.gene28079:CDS | 40.0% |
| ! | TAGTTGAGCTTCTAAGAGGT+AGG | + | chr4.4:10682109-10682128 | MS.gene28079:CDS | 40.0% |
| ! | TCTAAGAGGTAGGTTGACTT+GGG | + | chr4.4:10682119-10682138 | MS.gene28079:CDS | 40.0% |
| ! | TCTTTTGCTGCAACAACCTT+TGG | + | chr4.4:10683824-10683843 | MS.gene28079:CDS | 40.0% |
| ! | TTCTAAGAGGTAGGTTGACT+TGG | + | chr4.4:10682118-10682137 | MS.gene28079:CDS | 40.0% |
| !! | ATGACACAAAAGAAGCATCC+TGG | - | chr4.4:10681763-10681782 | None:intergenic | 40.0% |
| !! | TGACACAAAAGAAGCATCCT+GGG | - | chr4.4:10681762-10681781 | None:intergenic | 40.0% |
| ACAAAACTACCTGGCATGTG+GGG | + | chr4.4:10682474-10682493 | MS.gene28079:CDS | 45.0% | |
| ACTAATCGCTCAGCGTAATC+GGG | - | chr4.4:10684044-10684063 | None:intergenic | 45.0% | |
| AGGGTAGCAGTTAGAGCTTT+GGG | + | chr4.4:10682150-10682169 | MS.gene28079:CDS | 45.0% | |
| ATCGTCATGCCAAAAGTCTC+TGG | + | chr4.4:10683895-10683914 | MS.gene28079:CDS | 45.0% | |
| ATGATCCTGATCTCTCACTG+AGG | + | chr4.4:10684006-10684025 | MS.gene28079:CDS | 45.0% | |
| CAAGATTGCATCGAGACACA+AGG | + | chr4.4:10683528-10683547 | MS.gene28079:CDS | 45.0% | |
| CACTGTGATCTTCTTACACG+CGG | + | chr4.4:10682315-10682334 | MS.gene28079:CDS | 45.0% | |
| CAGAACCAGGAACAAATGCA+AGG | - | chr4.4:10682717-10682736 | None:intergenic | 45.0% | |
| CGGCAATTGCTAACCATGTT+TGG | + | chr4.4:10683238-10683257 | MS.gene28079:intron | 45.0% | |
| CTAGAGTTGTAATCTCCGCA+AGG | - | chr4.4:10683467-10683486 | None:intergenic | 45.0% | |
| CTCTCCTTCTTGGATCTCAT+AGG | - | chr4.4:10683771-10683790 | None:intergenic | 45.0% | |
| CTGTCTTAGGCATGAATGCT+TGG | + | chr4.4:10682801-10682820 | MS.gene28079:intron | 45.0% | |
| CTTCCGTGTCAAGATGATGA+TGG | + | chr4.4:10681838-10681857 | MS.gene28079:CDS | 45.0% | |
| CTTGCGGAGATTACAACTCT+AGG | + | chr4.4:10683465-10683484 | MS.gene28079:CDS | 45.0% | |
| GAAGAGACCAACATTGCAGT+TGG | - | chr4.4:10682389-10682408 | None:intergenic | 45.0% | |
| GACCCTGAATTCATAGAGCT+GGG | + | chr4.4:10681913-10681932 | MS.gene28079:CDS | 45.0% | |
| GAGAACAACTCTCTCCTTCT+TGG | - | chr4.4:10683781-10683800 | None:intergenic | 45.0% | |
| GCACAAGCTTATGACATGCT+AGG | + | chr4.4:10683924-10683943 | MS.gene28079:CDS | 45.0% | |
| GTGTCCTATGAGATCCAAGA+AGG | + | chr4.4:10683764-10683783 | MS.gene28079:CDS | 45.0% | |
| GTGTTCCAAAGACCACTGAT+AGG | - | chr4.4:10681874-10681893 | None:intergenic | 45.0% | |
| TGACCCTGAATTCATAGAGC+TGG | + | chr4.4:10681912-10681931 | MS.gene28079:CDS | 45.0% | |
| TGCTTGGCTTAGCATGTGAA+TGG | + | chr4.4:10682817-10682836 | MS.gene28079:intron | 45.0% | |
| TGTCATCAGAAGCTTGGTAG+GGG | + | chr4.4:10682549-10682568 | MS.gene28079:CDS | 45.0% | |
| TTCTCCCTATCAGTGGTCTT+TGG | + | chr4.4:10681866-10681885 | MS.gene28079:CDS | 45.0% | |
| TTGCTCGCTCTTCAGATGAT+TGG | + | chr4.4:10682616-10682635 | MS.gene28079:CDS | 45.0% | |
| TTTCCCACTTTAGCCAGTCA+CGG | + | chr4.4:10682198-10682217 | MS.gene28079:CDS | 45.0% | |
| ! | AGAGACTGATGACTCGGAAT+GGG | + | chr4.4:10684160-10684179 | MS.gene28079:CDS | 45.0% |
| ! | CTTTTGGCATGACGATTGAC+AGG | - | chr4.4:10683891-10683910 | None:intergenic | 45.0% |
| ! | GGAACTCTACTGACTGTCTT+AGG | + | chr4.4:10682788-10682807 | MS.gene28079:intron | 45.0% |
| ! | GGTGACGGTGGTGATATATA+TGG | + | chr4.4:10684134-10684153 | MS.gene28079:CDS | 45.0% |
| ! | TGCTGCTTGGTTATTTCGAG+AGG | + | chr4.4:10684079-10684098 | MS.gene28079:CDS | 45.0% |
| ! | TTTTGCCTCAGTGAGAGATC+AGG | - | chr4.4:10684014-10684033 | None:intergenic | 45.0% |
| !! | CAAAAGAAGCATCCTGGGTA+TGG | - | chr4.4:10681757-10681776 | None:intergenic | 45.0% |
| !! | GGAATTGGTGATGATGACGA+CGG | + | chr4.4:10684215-10684234 | MS.gene28079:CDS | 45.0% |
| !! | GTGTCAAGATGATGATGGTC+AGG | + | chr4.4:10681843-10681862 | MS.gene28079:CDS | 45.0% |
| !! | TGGTCTTTGGAACACAGCAA+TGG | + | chr4.4:10681879-10681898 | MS.gene28079:CDS | 45.0% |
| AAGGACTGAAGAATCGACGC+TGG | + | chr4.4:10681968-10681987 | MS.gene28079:CDS | 50.0% | |
| ACACTTGCTCTGCGTTTGCT+TGG | - | chr4.4:10681799-10681818 | None:intergenic | 50.0% | |
| ATTCCAGGGCAACTAGCAAC+AGG | - | chr4.4:10682576-10682595 | None:intergenic | 50.0% | |
| CAGTCTACAGAAATCGGTGC+TGG | - | chr4.4:10683345-10683364 | None:intergenic | 50.0% | |
| CATGACGATTGACAGGTCTG+TGG | - | chr4.4:10683884-10683903 | None:intergenic | 50.0% | |
| CATTCCGAGTCATCAGTCTC+TGG | - | chr4.4:10684161-10684180 | None:intergenic | 50.0% | |
| CCAGTTGAAGTAGCAGAACC+AGG | - | chr4.4:10682730-10682749 | None:intergenic | 50.0% | |
| CTCGAGAATTTCACCGTGAC+TGG | - | chr4.4:10682214-10682233 | None:intergenic | 50.0% | |
| GAGGGTAGCAGTTAGAGCTT+TGG | + | chr4.4:10682149-10682168 | MS.gene28079:CDS | 50.0% | |
| GATCTTCTTACACGCGGCAT+GGG | + | chr4.4:10682321-10682340 | MS.gene28079:CDS | 50.0% | |
| GCAGAAAGTTCTGTGCATGC+TGG | + | chr4.4:10682072-10682091 | MS.gene28079:CDS | 50.0% | |
| GCATCACTTATGGCAGCCAA+AGG | - | chr4.4:10683843-10683862 | None:intergenic | 50.0% | |
| GCCTGCATTAGTTGACCTTG+CGG | + | chr4.4:10683449-10683468 | MS.gene28079:CDS | 50.0% | |
| GTCATGCCAAAAGTCTCTGG+AGG | + | chr4.4:10683898-10683917 | MS.gene28079:CDS | 50.0% | |
| GTCTGTGGAGACATAGTGCA+CGG | - | chr4.4:10683869-10683888 | None:intergenic | 50.0% | |
| TATTAAGCAGGCTGCAGCAC+TGG | + | chr4.4:10683659-10683678 | MS.gene28079:CDS | 50.0% | |
| TCCGCAAGGTCAACTAATGC+AGG | - | chr4.4:10683453-10683472 | None:intergenic | 50.0% | |
| TCTGTGGAGACATAGTGCAC+GGG | - | chr4.4:10683868-10683887 | None:intergenic | 50.0% | |
| TGATCTTCTTACACGCGGCA+TGG | + | chr4.4:10682320-10682339 | MS.gene28079:CDS | 50.0% | |
| TGCACGGGTAGCATCACTTA+TGG | - | chr4.4:10683853-10683872 | None:intergenic | 50.0% | |
| TGGTCCAGAGACTGATGACT+CGG | + | chr4.4:10684154-10684173 | MS.gene28079:CDS | 50.0% | |
| TTGCATCGAGACACAAGGGT+CGG | + | chr4.4:10683533-10683552 | MS.gene28079:CDS | 50.0% | |
| ! | CAGAGACTGATGACTCGGAA+TGG | + | chr4.4:10684159-10684178 | MS.gene28079:CDS | 50.0% |
| ! | CATGGTGGCGTCCATAATCA+GGG | + | chr4.4:10684113-10684132 | MS.gene28079:CDS | 50.0% |
| ! | GCGGTGTTGAAATGGAGTCT+AGG | + | chr4.4:10682343-10682362 | MS.gene28079:CDS | 50.0% |
| ! | GGCTAAAGTGGGAAAAGTGC+TGG | - | chr4.4:10682193-10682212 | None:intergenic | 50.0% |
| ! | GTGATGATGACGACGGTGAT+TGG | + | chr4.4:10684222-10684241 | MS.gene28079:CDS | 50.0% |
| ! | TCACCGTGACTGGCTAAAGT+GGG | - | chr4.4:10682204-10682223 | None:intergenic | 50.0% |
| ! | TTCACCGTGACTGGCTAAAG+TGG | - | chr4.4:10682205-10682224 | None:intergenic | 50.0% |
| !! | CCTGGTTCTGCTACTTCAAC+TGG | + | chr4.4:10682727-10682746 | MS.gene28079:intron | 50.0% |
| !! | GCACTGGTTGTCAAGCTTGA+AGG | + | chr4.4:10683675-10683694 | MS.gene28079:CDS | 50.0% |
| !! | GTTGACTTGGGTTGAGCAGA+GGG | + | chr4.4:10682131-10682150 | MS.gene28079:CDS | 50.0% |
| AAACTACCTGGCATGTGGGG+TGG | + | chr4.4:10682477-10682496 | MS.gene28079:CDS | 55.0% | |
| AATGGAGTCTAGGAAGGCCG+AGG | + | chr4.4:10682353-10682372 | MS.gene28079:CDS | 55.0% | |
| AGTCTAGGAAGGCCGAGGAA+TGG | + | chr4.4:10682358-10682377 | MS.gene28079:CDS | 55.0% | |
| CACCACCGTCACCCTGATTA+TGG | - | chr4.4:10684127-10684146 | None:intergenic | 55.0% | |
| CGAGAGGCAGCTGTTAAGCA+TGG | + | chr4.4:10684095-10684114 | MS.gene28079:CDS | 55.0% | |
| GAGGCAGCTGTTAAGCATGG+TGG | + | chr4.4:10684098-10684117 | MS.gene28079:CDS | 55.0% | |
| GGCGTCCATAATCAGGGTGA+CGG | + | chr4.4:10684119-10684138 | MS.gene28079:CDS | 55.0% | |
| GGTCAGGTTCTCCCTATCAG+TGG | + | chr4.4:10681859-10681878 | MS.gene28079:CDS | 55.0% | |
| GTCTAGGAAGGCCGAGGAAT+GGG | + | chr4.4:10682359-10682378 | MS.gene28079:CDS | 55.0% | |
| TCATCGGACTGTCCATACCC+AGG | + | chr4.4:10681742-10681761 | MS.gene28079:CDS | 55.0% | |
| TGCATCGAGACACAAGGGTC+GGG | + | chr4.4:10683534-10683553 | MS.gene28079:CDS | 55.0% | |
| ! | AGAAGCAGATGCGTGCTGCT+TGG | + | chr4.4:10684066-10684085 | MS.gene28079:CDS | 55.0% |
| ! | CAGTTGGCTAGCCCATTCCT+CGG | - | chr4.4:10682373-10682392 | None:intergenic | 55.0% |
| ! | GCATGGTGGCGTCCATAATC+AGG | + | chr4.4:10684112-10684131 | MS.gene28079:CDS | 55.0% |
| ! | GTCCATAATCAGGGTGACGG+TGG | + | chr4.4:10684122-10684141 | MS.gene28079:CDS | 55.0% |
| ! | TGCTCGCCTCCAGAGACTTT+TGG | - | chr4.4:10683907-10683926 | None:intergenic | 55.0% |
| !! | GGGCTAGCCAACTGCAATGT+TGG | + | chr4.4:10682379-10682398 | MS.gene28079:CDS | 55.0% |
| !! | GGTTGACTTGGGTTGAGCAG+AGG | + | chr4.4:10682130-10682149 | MS.gene28079:CDS | 55.0% |
| ACAAGACCACCCCACATGCC+AGG | - | chr4.4:10682486-10682505 | None:intergenic | 60.0% | |
| CTTCTTACACGCGGCATGGG+CGG | + | chr4.4:10682324-10682343 | MS.gene28079:CDS | 60.0% | |
| GGACCTGTTGCTAGTTGCCC+TGG | + | chr4.4:10682570-10682589 | MS.gene28079:CDS | 60.0% | |
| ! | CGGCATGGGCGGTGTTGAAA+TGG | + | chr4.4:10682335-10682354 | MS.gene28079:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10681730 | 10684271 | 10681730 | ID=MS.gene28079 |
| chr4.4 | mRNA | 10681730 | 10684271 | 10681730 | ID=MS.gene28079.t1;Parent=MS.gene28079 |
| chr4.4 | exon | 10681730 | 10682698 | 10681730 | ID=MS.gene28079.t1.exon1;Parent=MS.gene28079.t1 |
| chr4.4 | CDS | 10681730 | 10682698 | 10681730 | ID=cds.MS.gene28079.t1;Parent=MS.gene28079.t1 |
| chr4.4 | exon | 10683432 | 10684271 | 10683432 | ID=MS.gene28079.t1.exon2;Parent=MS.gene28079.t1 |
| chr4.4 | CDS | 10683432 | 10684271 | 10683432 | ID=cds.MS.gene28079.t1;Parent=MS.gene28079.t1 |
| Gene Sequence |
| Protein sequence |
