Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28792.t1 | XP_013450398.1 | 94.2 | 327 | 19 | 0 | 1 | 327 | 1 | 327 | 9.60E-166 | 592.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28792.t1 | Q8GX84 | 65.0 | 320 | 109 | 2 | 8 | 327 | 20 | 336 | 1.5e-114 | 414.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28792.t1 | A0A072U502 | 94.2 | 327 | 19 | 0 | 1 | 327 | 1 | 327 | 7.0e-166 | 592.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene28792.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene28792 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene28792 | 0.803306 | 3.71E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene28792 | 0.836906 | 7.11E-57 | -1.69E-46 |
| MS.gene05188 | MS.gene28792 | 0.826266 | 2.98E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene28792 | 0.81258 | 3.95E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene28792 | 0.812972 | 3.24E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene28792 | 0.826842 | 2.17E-54 | -1.69E-46 |
| MS.gene054328 | MS.gene28792 | 0.811472 | 6.88E-51 | -1.69E-46 |
| MS.gene054957 | MS.gene28792 | 0.815427 | 9.30E-52 | -1.69E-46 |
| MS.gene056403 | MS.gene28792 | 0.846091 | 2.70E-59 | -1.69E-46 |
| MS.gene056605 | MS.gene28792 | 0.849832 | 2.51E-60 | -1.69E-46 |
| MS.gene056986 | MS.gene28792 | 0.83921 | 1.82E-57 | -1.69E-46 |
| MS.gene05781 | MS.gene28792 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene28792 | 0.826005 | 3.44E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene28792 | 0.833307 | 5.75E-56 | -1.69E-46 |
| MS.gene059935 | MS.gene28792 | 0.813482 | 2.50E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene28792 | 0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene28792 | 0.814392 | 1.58E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene28792 | 0.80343 | 3.50E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene28792 | 0.83033 | 3.12E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28792.t1 | MTR_7g109250 | 96.942 | 327 | 10 | 0 | 1 | 327 | 1 | 327 | 0.0 | 661 |
| MS.gene28792.t1 | MTR_7g109250 | 96.942 | 327 | 10 | 0 | 1 | 327 | 61 | 387 | 0.0 | 658 |
| MS.gene28792.t1 | MTR_7g108868 | 51.412 | 177 | 26 | 5 | 62 | 238 | 11 | 127 | 1.36e-46 | 156 |
| MS.gene28792.t1 | MTR_8g058593 | 51.412 | 177 | 26 | 5 | 62 | 238 | 11 | 127 | 1.36e-46 | 156 |
| MS.gene28792.t1 | MTR_8g058607 | 50.000 | 176 | 28 | 4 | 62 | 237 | 24 | 139 | 1.16e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28792.t1 | AT1G01350 | 69.375 | 320 | 95 | 2 | 8 | 327 | 20 | 336 | 3.31e-163 | 459 |
| MS.gene28792.t1 | AT5G06420 | 68.125 | 320 | 96 | 2 | 8 | 327 | 58 | 371 | 3.17e-161 | 455 |
| MS.gene28792.t1 | AT5G06420 | 68.125 | 320 | 96 | 2 | 8 | 327 | 58 | 371 | 3.17e-161 | 455 |
| MS.gene28792.t1 | AT4G01023 | 64.407 | 59 | 21 | 0 | 258 | 316 | 76 | 134 | 2.53e-26 | 104 |
| MS.gene28792.t1 | AT4G01023 | 65.079 | 63 | 21 | 1 | 254 | 316 | 92 | 153 | 5.86e-26 | 104 |
| MS.gene28792.t1 | AT4G01023 | 64.407 | 59 | 21 | 0 | 258 | 316 | 95 | 153 | 8.26e-26 | 103 |
Find 66 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATATTCTTCCTATTAAC+AGG | 0.250339 | 7.4:+6084711 | None:intergenic |
| TCTTCAGAAAACCTGTTAAT+AGG | 0.277151 | 7.4:-6084722 | MS.gene28792:CDS |
| TTGTAATCCTTGCATATATC+TGG | 0.290645 | 7.4:+6084204 | None:intergenic |
| GTGGGTCACACGGTCCTCTC+AGG | 0.313412 | 7.4:-6084269 | MS.gene28792:CDS |
| GATCGAGGTGATTACAAATC+TGG | 0.331028 | 7.4:-6084135 | MS.gene28792:CDS |
| TGCAAGGATTACAAGGAAAC+TGG | 0.409524 | 7.4:-6084195 | MS.gene28792:CDS |
| AAATGAAAGCTGGGTTTCTC+AGG | 0.415855 | 7.4:+6084534 | None:intergenic |
| CATTTGTCGAAACCCATTTG+TGG | 0.418726 | 7.4:-6083974 | MS.gene28792:CDS |
| CTTGCTTAAGAGCTCTTTCA+CGG | 0.431115 | 7.4:+6084418 | None:intergenic |
| CTGTGAGCATTGTGCATTGA+AGG | 0.436410 | 7.4:-6083920 | MS.gene28792:intron |
| TAGCAAAGCAACAGCAACTT+TGG | 0.436558 | 7.4:-6084478 | MS.gene28792:CDS |
| GTTGAGACAGGATCCACAAA+TGG | 0.441292 | 7.4:+6083961 | None:intergenic |
| AGAAGACTCGAAATGAAAGC+TGG | 0.441893 | 7.4:+6084524 | None:intergenic |
| ACACGGTCCTCTCAGGGCTT+CGG | 0.450938 | 7.4:-6084262 | MS.gene28792:CDS |
| TGCTTACACTTGGTTGAGAC+AGG | 0.460245 | 7.4:+6083949 | None:intergenic |
| GTCTGCAATCAGCCTACGCT+TGG | 0.462383 | 7.4:-6083752 | MS.gene28792:CDS |
| CAATAATTATACAGATCATA+AGG | 0.469416 | 7.4:-6084334 | MS.gene28792:CDS |
| GGTGGCAGATGGAGAAAGAA+TGG | 0.469953 | 7.4:-6084113 | MS.gene28792:CDS |
| TGCAGGTGAGGATGCGGAAG+AGG | 0.471533 | 7.4:-6084055 | MS.gene28792:CDS |
| CGAGGATGTAAAATTATACA+AGG | 0.486690 | 7.4:-6084361 | MS.gene28792:CDS |
| ACATACCTTGTTCAGTCGGC+TGG | 0.489348 | 7.4:+6084860 | None:intergenic |
| GCAAACAATTGCCAGTGAAA+AGG | 0.499122 | 7.4:-6084295 | MS.gene28792:CDS |
| CGACAAATGAAACACGCAAA+TGG | 0.499537 | 7.4:+6083988 | None:intergenic |
| GAAAGCAAGGAAGATGAGAT+TGG | 0.507679 | 7.4:-6084079 | MS.gene28792:CDS |
| TGCAGAGCTCTTCGAAGAGC+CGG | 0.511210 | 7.4:+6084578 | None:intergenic |
| AATTATACAGATCATAAGGC+TGG | 0.520545 | 7.4:-6084330 | MS.gene28792:CDS |
| ATCGAGGTGATTACAAATCT+GGG | 0.520829 | 7.4:-6084134 | MS.gene28792:CDS |
| GAGCTCTTTCACGGATGGCA+CGG | 0.524231 | 7.4:+6084427 | None:intergenic |
| TTGAGACAGGATCCACAAAT+GGG | 0.525917 | 7.4:+6083962 | None:intergenic |
| AGATATATGCAAGGATTACA+AGG | 0.530308 | 7.4:-6084202 | MS.gene28792:CDS |
| TGGGTCACACGGTCCTCTCA+GGG | 0.532282 | 7.4:-6084268 | MS.gene28792:CDS |
| CTTAAGAGCTCTTTCACGGA+TGG | 0.538525 | 7.4:+6084422 | None:intergenic |
| AGTCTCAAGGGAAAGAGTAC+TGG | 0.538575 | 7.4:-6084387 | MS.gene28792:CDS |
| GAAAACCAGCCGACTGAACA+AGG | 0.548242 | 7.4:-6084865 | MS.gene28792:intron |
| GTGGCAGATGGAGAAAGAAT+GGG | 0.553122 | 7.4:-6084112 | MS.gene28792:CDS |
| TTACAAATCTGGGTGGCAGA+TGG | 0.553483 | 7.4:-6084124 | MS.gene28792:CDS |
| GAAGACTCGAAATGAAAGCT+GGG | 0.554193 | 7.4:+6084525 | None:intergenic |
| AGCTCTTTCACGGATGGCAC+GGG | 0.560125 | 7.4:+6084428 | None:intergenic |
| GAAACTGGTTACTGTGGGTA+TGG | 0.560524 | 7.4:-6084180 | MS.gene28792:CDS |
| TATTGAGAATGAAGATAATG+AGG | 0.560776 | 7.4:-6084679 | MS.gene28792:CDS |
| TCATGAGATACGAAAGAAGA+TGG | 0.563924 | 7.4:-6083714 | MS.gene28792:CDS |
| ATAGGAAGAATATGAGGAAG+CGG | 0.564756 | 7.4:-6084704 | MS.gene28792:CDS |
| GGTGAGGATGCGGAAGAGGA+AGG | 0.573050 | 7.4:-6084051 | MS.gene28792:CDS |
| CTGTTAATAGGAAGAATATG+AGG | 0.583376 | 7.4:-6084710 | MS.gene28792:CDS |
| GGGATGAAGCTGAGAAAGCA+AGG | 0.584805 | 7.4:-6084092 | MS.gene28792:CDS |
| TACAAGGAAACTGGTTACTG+TGG | 0.587264 | 7.4:-6084186 | MS.gene28792:CDS |
| ACAATTGCCAGTGAAAAGGC+TGG | 0.588175 | 7.4:-6084291 | MS.gene28792:CDS |
| TTATACATACCTTGTTCAGT+CGG | 0.588673 | 7.4:+6084856 | None:intergenic |
| GATGAGATTGGCTGCAGGTG+AGG | 0.590274 | 7.4:-6084067 | MS.gene28792:CDS |
| GAAAAGGCTGGTGGGTCACA+CGG | 0.600903 | 7.4:-6084279 | MS.gene28792:CDS |
| AGGAAGATGAGATTGGCTGC+AGG | 0.603143 | 7.4:-6084072 | MS.gene28792:CDS |
| ATTGGCTGCAGGTGAGGATG+CGG | 0.603342 | 7.4:-6084061 | MS.gene28792:CDS |
| ATTGCCAGTGAAAAGGCTGG+TGG | 0.607353 | 7.4:-6084288 | MS.gene28792:CDS |
| GATACGAAAGAAGATGGCTG+AGG | 0.623889 | 7.4:-6083708 | MS.gene28792:CDS |
| TTGCCAGTGAAAAGGCTGGT+GGG | 0.630138 | 7.4:-6084287 | MS.gene28792:CDS |
| CAAGCGACTGAGAGTCTCAA+GGG | 0.630489 | 7.4:-6084399 | MS.gene28792:CDS |
| ACAGAAGTAGTGCTTACACT+TGG | 0.630927 | 7.4:+6083939 | None:intergenic |
| GCAAGCGACTGAGAGTCTCA+AGG | 0.636269 | 7.4:-6084400 | MS.gene28792:CDS |
| GGGAAAGAGTACTGGTTCCG+AGG | 0.640397 | 7.4:-6084379 | MS.gene28792:CDS |
| ACAAGGAAACTGGTTACTGT+GGG | 0.647981 | 7.4:-6084185 | MS.gene28792:CDS |
| TGTAAGTTTATGCATGATCG+AGG | 0.650874 | 7.4:-6084150 | MS.gene28792:CDS |
| TTATCAGCCAGATATATGCA+AGG | 0.656472 | 7.4:-6084211 | MS.gene28792:CDS |
| AGAGCTCTTCGAAGAGCCGG+TGG | 0.686462 | 7.4:+6084581 | None:intergenic |
| GAGGATGTAAAATTATACAA+GGG | 0.688297 | 7.4:-6084360 | MS.gene28792:CDS |
| ATGTGAGCCGAAGCCCTGAG+AGG | 0.689295 | 7.4:+6084255 | None:intergenic |
| GAGGTGATTACAAATCTGGG+TGG | 0.758440 | 7.4:-6084131 | MS.gene28792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAGGTTAATGA+TGG | + | chr7.4:6083821-6083840 | None:intergenic | 20.0% |
| !! | CAATAATTATACAGATCATA+AGG | - | chr7.4:6084258-6084277 | MS.gene28792:CDS | 20.0% |
| ! | AGAAGTTAGGCATAATTAAA+AGG | + | chr7.4:6084776-6084795 | None:intergenic | 25.0% |
| ! | GAGGATGTAAAATTATACAA+GGG | - | chr7.4:6084232-6084251 | MS.gene28792:CDS | 25.0% |
| ! | TATTGAGAATGAAGATAATG+AGG | - | chr7.4:6083913-6083932 | MS.gene28792:intron | 25.0% |
| !! | CTTGTATAATTTTACATCCT+CGG | + | chr7.4:6084233-6084252 | None:intergenic | 25.0% |
| !!! | ACTTATTTGCTTTGAAGTTA+AGG | + | chr7.4:6084703-6084722 | None:intergenic | 25.0% |
| !!! | CTTATTTGCTTTGAAGTTAA+GGG | + | chr7.4:6084702-6084721 | None:intergenic | 25.0% |
| AAGTAAAATGAGCAGAAGTT+AGG | + | chr7.4:6084789-6084808 | None:intergenic | 30.0% | |
| AATTATACAGATCATAAGGC+TGG | - | chr7.4:6084262-6084281 | MS.gene28792:CDS | 30.0% | |
| ACAAACGCGTAGAAAAAAAA+AGG | + | chr7.4:6083831-6083850 | None:intergenic | 30.0% | |
| AGATATATGCAAGGATTACA+AGG | - | chr7.4:6084390-6084409 | MS.gene28792:CDS | 30.0% | |
| CGAGGATGTAAAATTATACA+AGG | - | chr7.4:6084231-6084250 | MS.gene28792:CDS | 30.0% | |
| CTCATATTCTTCCTATTAAC+AGG | + | chr7.4:6083884-6083903 | None:intergenic | 30.0% | |
| CTGTTAATAGGAAGAATATG+AGG | - | chr7.4:6083882-6083901 | MS.gene28792:intron | 30.0% | |
| GATGGTACAAAAAAATGTAG+AGG | + | chr7.4:6083803-6083822 | None:intergenic | 30.0% | |
| TCTTCAGAAAACCTGTTAAT+AGG | - | chr7.4:6083870-6083889 | MS.gene28792:intron | 30.0% | |
| TGTTCAGAAAAAGAACATGA+AGG | - | chr7.4:6083967-6083986 | MS.gene28792:CDS | 30.0% | |
| TTATACATACCTTGTTCAGT+CGG | + | chr7.4:6083739-6083758 | None:intergenic | 30.0% | |
| TTGTAATCCTTGCATATATC+TGG | + | chr7.4:6084391-6084410 | None:intergenic | 30.0% | |
| ! | AATAAGTTGTTCTTTTCCAC+CGG | - | chr7.4:6083995-6084014 | MS.gene28792:CDS | 30.0% |
| ACATTAAAAATGCCAAGCGT+AGG | + | chr7.4:6084855-6084874 | None:intergenic | 35.0% | |
| ATAGGAAGAATATGAGGAAG+CGG | - | chr7.4:6083888-6083907 | MS.gene28792:intron | 35.0% | |
| ATCGAGGTGATTACAAATCT+GGG | - | chr7.4:6084458-6084477 | MS.gene28792:CDS | 35.0% | |
| TCATGAGATACGAAAGAAGA+TGG | - | chr7.4:6084878-6084897 | MS.gene28792:CDS | 35.0% | |
| TGTAAGTTTATGCATGATCG+AGG | - | chr7.4:6084442-6084461 | MS.gene28792:CDS | 35.0% | |
| TTATCAGCCAGATATATGCA+AGG | - | chr7.4:6084381-6084400 | MS.gene28792:CDS | 35.0% | |
| ! | TACGCTTGGCATTTTTAATG+TGG | - | chr7.4:6084854-6084873 | MS.gene28792:intron | 35.0% |
| AAATGAAAGCTGGGTTTCTC+AGG | + | chr7.4:6084061-6084080 | None:intergenic | 40.0% | |
| ACAAGGAAACTGGTTACTGT+GGG | - | chr7.4:6084407-6084426 | MS.gene28792:CDS | 40.0% | |
| ACAGAAGTAGTGCTTACACT+TGG | + | chr7.4:6084656-6084675 | None:intergenic | 40.0% | |
| AGAAGACTCGAAATGAAAGC+TGG | + | chr7.4:6084071-6084090 | None:intergenic | 40.0% | |
| CATTTGTCGAAACCCATTTG+TGG | - | chr7.4:6084618-6084637 | MS.gene28792:CDS | 40.0% | |
| CGACAAATGAAACACGCAAA+TGG | + | chr7.4:6084607-6084626 | None:intergenic | 40.0% | |
| CTTGCTTAAGAGCTCTTTCA+CGG | + | chr7.4:6084177-6084196 | None:intergenic | 40.0% | |
| GAAAGCAAGGAAGATGAGAT+TGG | - | chr7.4:6084513-6084532 | MS.gene28792:CDS | 40.0% | |
| GAAGACTCGAAATGAAAGCT+GGG | + | chr7.4:6084070-6084089 | None:intergenic | 40.0% | |
| GATCGAGGTGATTACAAATC+TGG | - | chr7.4:6084457-6084476 | MS.gene28792:CDS | 40.0% | |
| GCAAACAATTGCCAGTGAAA+AGG | - | chr7.4:6084297-6084316 | MS.gene28792:CDS | 40.0% | |
| TACAAGGAAACTGGTTACTG+TGG | - | chr7.4:6084406-6084425 | MS.gene28792:CDS | 40.0% | |
| TAGCAAAGCAACAGCAACTT+TGG | - | chr7.4:6084114-6084133 | MS.gene28792:CDS | 40.0% | |
| TGCAAGGATTACAAGGAAAC+TGG | - | chr7.4:6084397-6084416 | MS.gene28792:CDS | 40.0% | |
| TTGAGACAGGATCCACAAAT+GGG | + | chr7.4:6084633-6084652 | None:intergenic | 40.0% | |
| ACAATTGCCAGTGAAAAGGC+TGG | - | chr7.4:6084301-6084320 | MS.gene28792:CDS | 45.0% | |
| CTTAAGAGCTCTTTCACGGA+TGG | + | chr7.4:6084173-6084192 | None:intergenic | 45.0% | |
| GAAACTGGTTACTGTGGGTA+TGG | - | chr7.4:6084412-6084431 | MS.gene28792:CDS | 45.0% | |
| GAGGTGATTACAAATCTGGG+TGG | - | chr7.4:6084461-6084480 | MS.gene28792:CDS | 45.0% | |
| GATACGAAAGAAGATGGCTG+AGG | - | chr7.4:6084884-6084903 | MS.gene28792:CDS | 45.0% | |
| GTGGCAGATGGAGAAAGAAT+GGG | - | chr7.4:6084480-6084499 | MS.gene28792:CDS | 45.0% | |
| GTTGAGACAGGATCCACAAA+TGG | + | chr7.4:6084634-6084653 | None:intergenic | 45.0% | |
| TGCTTACACTTGGTTGAGAC+AGG | + | chr7.4:6084646-6084665 | None:intergenic | 45.0% | |
| TTACAAATCTGGGTGGCAGA+TGG | - | chr7.4:6084468-6084487 | MS.gene28792:CDS | 45.0% | |
| ! | AGTCTCAAGGGAAAGAGTAC+TGG | - | chr7.4:6084205-6084224 | MS.gene28792:CDS | 45.0% |
| ! | CTGTGAGCATTGTGCATTGA+AGG | - | chr7.4:6084672-6084691 | MS.gene28792:CDS | 45.0% |
| ACATACCTTGTTCAGTCGGC+TGG | + | chr7.4:6083735-6083754 | None:intergenic | 50.0% | |
| ATTGCCAGTGAAAAGGCTGG+TGG | - | chr7.4:6084304-6084323 | MS.gene28792:CDS | 50.0% | |
| CAAGCGACTGAGAGTCTCAA+GGG | - | chr7.4:6084193-6084212 | MS.gene28792:CDS | 50.0% | |
| GAAAACCAGCCGACTGAACA+AGG | - | chr7.4:6083727-6083746 | MS.gene28792:CDS | 50.0% | |
| GGGATGAAGCTGAGAAAGCA+AGG | - | chr7.4:6084500-6084519 | MS.gene28792:CDS | 50.0% | |
| GGTGGCAGATGGAGAAAGAA+TGG | - | chr7.4:6084479-6084498 | MS.gene28792:CDS | 50.0% | |
| TTGCCAGTGAAAAGGCTGGT+GGG | - | chr7.4:6084305-6084324 | MS.gene28792:CDS | 50.0% | |
| ! | AGGAAGATGAGATTGGCTGC+AGG | - | chr7.4:6084520-6084539 | MS.gene28792:CDS | 50.0% |
| !!! | CGGCTGGTTTTCAGCAGATT+TGG | + | chr7.4:6083719-6083738 | None:intergenic | 50.0% |
| AGCTCTTTCACGGATGGCAC+GGG | + | chr7.4:6084167-6084186 | None:intergenic | 55.0% | |
| ATTGGCTGCAGGTGAGGATG+CGG | - | chr7.4:6084531-6084550 | MS.gene28792:CDS | 55.0% | |
| GAGCTCTTTCACGGATGGCA+CGG | + | chr7.4:6084168-6084187 | None:intergenic | 55.0% | |
| GCAAGCGACTGAGAGTCTCA+AGG | - | chr7.4:6084192-6084211 | MS.gene28792:CDS | 55.0% | |
| GTCTGCAATCAGCCTACGCT+TGG | - | chr7.4:6084840-6084859 | MS.gene28792:intron | 55.0% | |
| TGCAGAGCTCTTCGAAGAGC+CGG | + | chr7.4:6084017-6084036 | None:intergenic | 55.0% | |
| ! | GAAAAGGCTGGTGGGTCACA+CGG | - | chr7.4:6084313-6084332 | MS.gene28792:CDS | 55.0% |
| ! | GATGAGATTGGCTGCAGGTG+AGG | - | chr7.4:6084525-6084544 | MS.gene28792:CDS | 55.0% |
| ! | TGACCCACCAGCCTTTTCAC+TGG | + | chr7.4:6084311-6084330 | None:intergenic | 55.0% |
| !! | GGGAAAGAGTACTGGTTCCG+AGG | - | chr7.4:6084213-6084232 | MS.gene28792:CDS | 55.0% |
| ACACGGTCCTCTCAGGGCTT+CGG | - | chr7.4:6084330-6084349 | MS.gene28792:CDS | 60.0% | |
| AGAGCTCTTCGAAGAGCCGG+TGG | + | chr7.4:6084014-6084033 | None:intergenic | 60.0% | |
| ATGTGAGCCGAAGCCCTGAG+AGG | + | chr7.4:6084340-6084359 | None:intergenic | 60.0% | |
| GGTGAGGATGCGGAAGAGGA+AGG | - | chr7.4:6084541-6084560 | MS.gene28792:CDS | 60.0% | |
| TGCAGGTGAGGATGCGGAAG+AGG | - | chr7.4:6084537-6084556 | MS.gene28792:CDS | 60.0% | |
| TGGGTCACACGGTCCTCTCA+GGG | - | chr7.4:6084324-6084343 | MS.gene28792:CDS | 60.0% | |
| GTGGGTCACACGGTCCTCTC+AGG | - | chr7.4:6084323-6084342 | MS.gene28792:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 6083700 | 6084914 | 6083700 | ID=MS.gene28792 |
| chr7.4 | mRNA | 6083700 | 6084914 | 6083700 | ID=MS.gene28792.t1;Parent=MS.gene28792 |
| chr7.4 | exon | 6084866 | 6084914 | 6084866 | ID=MS.gene28792.t1.exon1;Parent=MS.gene28792.t1 |
| chr7.4 | CDS | 6084866 | 6084914 | 6084866 | ID=cds.MS.gene28792.t1;Parent=MS.gene28792.t1 |
| chr7.4 | exon | 6083921 | 6084753 | 6083921 | ID=MS.gene28792.t1.exon2;Parent=MS.gene28792.t1 |
| chr7.4 | CDS | 6083921 | 6084753 | 6083921 | ID=cds.MS.gene28792.t1;Parent=MS.gene28792.t1 |
| chr7.4 | exon | 6083700 | 6083801 | 6083700 | ID=MS.gene28792.t1.exon3;Parent=MS.gene28792.t1 |
| chr7.4 | CDS | 6083700 | 6083801 | 6083700 | ID=cds.MS.gene28792.t1;Parent=MS.gene28792.t1 |
| Gene Sequence |
| Protein sequence |
