AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28852


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28852.t1 MTR_7g110260 97.525 1374 34 0 1 1374 1 1374 0.0 2775
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28852.t1 AT4G01860 50.359 1392 584 22 1 1369 1 1308 0.0 1353
MS.gene28852.t1 AT4G01860 50.359 1392 584 22 1 1369 1 1308 0.0 1353

Find 322 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTGCCCTTGTCTTATT+TGG 0.100506 7.4:-5413216 MS.gene28852:CDS
CCAATATGCTCCAACATATT+AGG 0.144819 7.4:+5411511 None:intergenic
CTGATGGGAGTGTTACATTT+TGG 0.150669 7.4:-5405044 MS.gene28852:CDS
TTGTTGTACGACTTAGAATT+TGG 0.179799 7.4:-5414930 MS.gene28852:CDS
TGCATTACTTGTTCCTTTAT+TGG 0.190433 7.4:-5405663 MS.gene28852:CDS
AAAACAATAAATATCGATTA+TGG 0.196659 7.4:-5404514 MS.gene28852:CDS
TACTTATTGGTGCAAATCTT+TGG 0.221795 7.4:-5411001 MS.gene28852:CDS
CCCTGACAGTCATGGTCTTC+TGG 0.223038 7.4:+5413518 None:intergenic
GTTATAAGAAGTGACAAATT+TGG 0.231727 7.4:+5411646 None:intergenic
TTGGTGTCCTTCAAGTATTC+AGG 0.257776 7.4:+5404454 None:intergenic
GGCAGCTATTGGGTACTTAT+TGG 0.258579 7.4:-5411014 MS.gene28852:CDS
TTGTTAAATGTGCTGGTTCC+AGG 0.258773 7.4:-5405960 MS.gene28852:intron
AGGATTGTACATGTCGTATA+TGG 0.266171 7.4:-5412316 MS.gene28852:CDS
CCTAATATGTTGGAGCATAT+TGG 0.267421 7.4:-5411511 MS.gene28852:CDS
ACACCTTTAAAATGATTTAC+TGG 0.272491 7.4:+5408455 None:intergenic
TCTGTGTGTACTTGAATATT+TGG 0.272573 7.4:+5406146 None:intergenic
TTGTTGTCTTCAGATTTATT+TGG 0.277251 7.4:+5404784 None:intergenic
CATCTGTAGATTTCATAGTA+TGG 0.278027 7.4:-5408022 MS.gene28852:CDS
AATGCAGAATTTGCAATTTA+CGG 0.280829 7.4:-5408141 MS.gene28852:CDS
GTTTCCTTTGCTAAAGAATC+TGG 0.283970 7.4:-5408516 MS.gene28852:CDS
GGAAAACATCTCTGTTCTTC+CGG 0.284169 7.4:+5411543 None:intergenic
ATACACGAAGATATGCTTCT+AGG 0.291653 7.4:-5406695 MS.gene28852:CDS
GCAGTTGATGTTGCTGAAAA+TGG 0.293815 7.4:-5406099 MS.gene28852:CDS
TTTGTACTCAATGCGGTTAT+GGG 0.298417 7.4:-5414101 MS.gene28852:CDS
TAGAAGAGGAAGAGAGTGAT+TGG 0.299359 7.4:+5415062 None:intergenic
CAAGTTTGGTCATTGGGTTT+TGG 0.308075 7.4:-5414736 MS.gene28852:CDS
TTCTTGTCTGTCCAGGGGTT+TGG 0.308522 7.4:-5411584 MS.gene28852:CDS
CCCTTACGTAAGCCTTATAA+AGG 0.311898 7.4:-5405608 MS.gene28852:intron
CCAGAGTTTCAATCCTCCTC+TGG 0.315888 7.4:+5408975 None:intergenic
CAATTCTAATGCGGTTCTTA+AGG 0.317103 7.4:-5414244 MS.gene28852:CDS
TGTACAGAGGTAGGGGTATA+TGG 0.319865 7.4:-5411684 MS.gene28852:intron
CTTAAGAACCGCATTAGAAT+TGG 0.322600 7.4:+5414245 None:intergenic
TGGTACATCACCTAGAAAAT+AGG 0.323933 7.4:+5407833 None:intergenic
GTGCAAGACAAACCTTTATA+AGG 0.325547 7.4:+5405596 None:intergenic
GGTGCAAATCTTTGGGATCT+AGG 0.325889 7.4:-5410993 MS.gene28852:intron
ATCCATTTGTTGCCCAAGTT+TGG 0.327994 7.4:-5414750 MS.gene28852:CDS
TCGTTTGAAAATGACGAGTT+TGG 0.329316 7.4:-5414792 MS.gene28852:CDS
TGGAGATCTACGTGGAAATA+TGG 0.335978 7.4:-5408543 MS.gene28852:CDS
CTTTACTTGGCAAGCTGAAA+TGG 0.338289 7.4:-5411040 MS.gene28852:CDS
CAAAGCGTGTCTTAACTTCT+TGG 0.340446 7.4:-5406308 MS.gene28852:CDS
CAATATGCTCCAACATATTA+GGG 0.340653 7.4:+5411512 None:intergenic
CGTTTGAAAATGACGAGTTT+GGG 0.343426 7.4:-5414791 MS.gene28852:CDS
ACTTATTGGTGCAAATCTTT+GGG 0.348034 7.4:-5411000 MS.gene28852:CDS
CATTATCAGATTGCTGTTGC+TGG 0.351974 7.4:-5403748 MS.gene28852:CDS
ATGCAGAATTTGCAATTTAC+GGG 0.352156 7.4:-5408140 MS.gene28852:CDS
GCTACTTAAAAGCAGGAAAC+TGG 0.352365 7.4:-5406286 MS.gene28852:CDS
AACCCCAGATGTAGCACATT+TGG 0.358029 7.4:-5404485 MS.gene28852:CDS
TTGGACATAATGCCCGAGTT+TGG 0.358757 7.4:-5413197 MS.gene28852:CDS
TGTTGCCCAAGTTTGGTCAT+TGG 0.359027 7.4:-5414743 MS.gene28852:CDS
CAAAACCCAATGACCAAACT+TGG 0.360015 7.4:+5414737 None:intergenic
GACAAAACAGGTGCCAATAA+AGG 0.361121 7.4:+5405650 None:intergenic
TTATAAGAAGTGACAAATTT+GGG 0.361733 7.4:+5411647 None:intergenic
GAATTTAGTCAATGAGAATA+AGG 0.364171 7.4:-5408000 MS.gene28852:intron
TGGACATAATGCCCGAGTTT+GGG 0.365273 7.4:-5413196 MS.gene28852:CDS
TATAATGCAGCGCACGTGTA+TGG 0.367463 7.4:-5413278 MS.gene28852:intron
GTTGCCCAAGTTTGGTCATT+GGG 0.367580 7.4:-5414742 MS.gene28852:CDS
AGAAAAGAGTGAAAATGTTT+CGG 0.370571 7.4:-5414818 MS.gene28852:CDS
TGAAATGGAGAGGCAGCTAT+TGG 0.370891 7.4:-5411025 MS.gene28852:CDS
TTGTCACTTCTTATAACTGC+TGG 0.373209 7.4:-5411640 MS.gene28852:CDS
AAACAATAAATATCGATTAT+GGG 0.377190 7.4:-5404513 MS.gene28852:CDS
GTGACAATTCAGTTTGCATA+TGG 0.378615 7.4:-5414275 MS.gene28852:CDS
GAAAACATCTCTGTTCTTCC+GGG 0.382830 7.4:+5411544 None:intergenic
GTGACCAAATGTGCTACATC+TGG 0.387061 7.4:+5404481 None:intergenic
AAATCAAGTTGGATTGCAAC+TGG 0.388225 7.4:-5406644 MS.gene28852:CDS
AGCTTGTCCAGGTCAGCAAC+GGG 0.388945 7.4:-5411212 MS.gene28852:CDS
GGCCTCATTCTTGTCTGTCC+AGG 0.392682 7.4:-5411591 MS.gene28852:CDS
AGATGCTACAGTTATGTTAC+GGG 0.393946 7.4:-5405821 MS.gene28852:CDS
TTTGCAGATAACATCAAAGT+TGG 0.395590 7.4:-5405096 MS.gene28852:intron
TAAATCTGAAGACAACAATA+TGG 0.397589 7.4:-5404779 MS.gene28852:CDS
ATATTGTACCGGATGCAATA+TGG 0.399697 7.4:+5414059 None:intergenic
AATGTGTTTGGATGCATGTT+TGG 0.403377 7.4:-5408857 MS.gene28852:CDS
GGTCCATGTCAAAATTGCTT+GGG 0.405283 7.4:-5406485 MS.gene28852:CDS
CAGTTAGATTGAGCTTTACT+TGG 0.408055 7.4:-5411053 MS.gene28852:CDS
CAGCAACAGCAATCTGATAA+TGG 0.408486 7.4:+5403749 None:intergenic
ACGCACAGGGAGAGGAAGTC+AGG 0.409964 7.4:-5404938 MS.gene28852:CDS
TGGAATGCGGATAATGTGTT+TGG 0.413922 7.4:-5408869 MS.gene28852:CDS
GTGTCTGGACGGATGGATCT+TGG 0.416857 7.4:-5403986 MS.gene28852:CDS
TCCAGAAGACCATGACTGTC+AGG 0.417114 7.4:-5413519 MS.gene28852:CDS
AGATGGTTGTATATGCTATC+TGG 0.419219 7.4:-5408177 MS.gene28852:CDS
TTGATCAGCGGGTCCGATGC+TGG 0.421084 7.4:-5403947 MS.gene28852:CDS
CACAAGACGACCATGCTATT+CGG 0.423946 7.4:+5413414 None:intergenic
CAGATTGCTGTTGCTGGAAG+AGG 0.429461 7.4:-5403742 MS.gene28852:CDS
GCCCTAGCAGATAACGCTTC+AGG 0.429563 7.4:+5403867 None:intergenic
GACCAAACTTGGGCAACAAA+TGG 0.431698 7.4:+5414748 None:intergenic
GCCTCATTCTTGTCTGTCCA+GGG 0.433589 7.4:-5411590 MS.gene28852:CDS
AGAAGAGGAAGAGAGTGATT+GGG 0.433998 7.4:+5415063 None:intergenic
CAGAGTTTCAATCCTCCTCT+GGG 0.438043 7.4:+5408976 None:intergenic
CAGATGCTACAGTTATGTTA+CGG 0.438759 7.4:-5405822 MS.gene28852:CDS
TGTTGTACGACTTAGAATTT+GGG 0.439872 7.4:-5414929 MS.gene28852:CDS
GGATGCATGTTTGGAGGAAG+AGG 0.440955 7.4:-5408848 MS.gene28852:intron
TGTAGTAGAATTGATGCTTT+CGG 0.444030 7.4:+5404825 None:intergenic
GCAAAACAGTTCTTCATCTC+TGG 0.445470 7.4:+5407813 None:intergenic
CCAAATAAGACAAGGGCAAT+GGG 0.449054 7.4:+5413216 None:intergenic
CCAGAGGAGGATTGAAACTC+TGG 0.449865 7.4:-5408975 MS.gene28852:CDS
TGGGTTTGACTCTGCTATCA+AGG 0.450391 7.4:-5411620 MS.gene28852:CDS
CACGTTCTATTAGTTTACTC+TGG 0.450782 7.4:+5403916 None:intergenic
CATTTGCATCCCTAATATGT+TGG 0.451689 7.4:-5411521 MS.gene28852:CDS
TTGAAGATTTATCATGTTGA+GGG 0.452264 7.4:+5413546 None:intergenic
TTAAGTTCGCTCCTCTCATC+AGG 0.453249 7.4:+5406381 None:intergenic
ACTCTCCAGGTATTGAGAAT+TGG 0.453323 7.4:-5406506 MS.gene28852:CDS
CCCACTGAAATCAGTAAAGT+TGG 0.455845 7.4:+5406333 None:intergenic
AAGCTTCCACACTGTCAGTC+AGG 0.457149 7.4:+5405019 None:intergenic
CATCATGCTGCTTATCAGTT+CGG 0.457544 7.4:+5406247 None:intergenic
AGCGTTGTTGTAACTAAGCT+TGG 0.459800 7.4:-5408410 MS.gene28852:CDS
GGTTTCTATGTACAGAGGTA+GGG 0.462531 7.4:-5411692 MS.gene28852:intron
AGCATATTGGATTGACAGAC+AGG 0.465252 7.4:-5411498 MS.gene28852:intron
CTTCTTGGCTACTTAAAAGC+AGG 0.466077 7.4:-5406293 MS.gene28852:CDS
TCCTTGTTCAAATGAGTCCT+TGG 0.468117 7.4:+5411161 None:intergenic
TGTCTGGACGGATGGATCTT+GGG 0.468354 7.4:-5403985 MS.gene28852:CDS
CAACATATTAGGGATGCAAA+TGG 0.469506 7.4:+5411522 None:intergenic
CTATTAGATTGTGAAGGGTC+AGG 0.471118 7.4:+5408946 None:intergenic
TGTCGTATATGGGGAATTGA+TGG 0.473433 7.4:-5412305 MS.gene28852:CDS
AAACGACCACGCACAGGGAG+AGG 0.476888 7.4:-5404946 MS.gene28852:CDS
GCAGAATTCATATCAAGTTA+TGG 0.478243 7.4:-5408889 MS.gene28852:CDS
GGATTGTACATGTCGTATAT+GGG 0.480492 7.4:-5412315 MS.gene28852:CDS
TTCGATGGAATTCGTGTGCA+CGG 0.482977 7.4:-5414882 MS.gene28852:CDS
CACTGAACCTGAATACTTGA+AGG 0.482986 7.4:-5404461 MS.gene28852:CDS
GGTTCGGGCAGATTGTCGTT+TGG 0.483519 7.4:-5413577 MS.gene28852:intron
TTTGTGCCCCGTTGCTGACC+TGG 0.483665 7.4:+5411205 None:intergenic
GAAGTTCTCCATATTGCATC+CGG 0.483799 7.4:-5414067 MS.gene28852:CDS
AAGGATGTGGTGATGAGGAT+TGG 0.483965 7.4:-5411143 MS.gene28852:CDS
TCCAAATAAGACAAGGGCAA+TGG 0.484915 7.4:+5413215 None:intergenic
GAATCTGTGATTGTAGTGTT+TGG 0.486217 7.4:-5414843 MS.gene28852:CDS
TGTGTACTTGAATATTTGGT+TGG 0.486913 7.4:+5406150 None:intergenic
CTGCATGGATTTATTGTCCA+AGG 0.489582 7.4:-5411178 MS.gene28852:CDS
GTTTGATTTAGGTACTCTCC+AGG 0.491977 7.4:-5406519 MS.gene28852:intron
TGAAAATTCCATGTGGTGGC+TGG 0.492156 7.4:-5407869 MS.gene28852:CDS
GGAAAGACAAGGCAACAATC+AGG 0.492374 7.4:-5404872 MS.gene28852:CDS
ATGCAAATAGTGGACTTCTC+AGG 0.492584 7.4:-5403718 MS.gene28852:CDS
ACCTTTATAAGGCTTACGTA+AGG 0.493114 7.4:+5405607 None:intergenic
GAGATAAACATGAGGATGAC+TGG 0.493426 7.4:-5406008 MS.gene28852:CDS
CTGCATCGTGGCCCTTACCT+TGG 0.493851 7.4:-5415117 MS.gene28852:CDS
ACTAAAAGATAATATATATG+AGG 0.493898 7.4:-5413480 MS.gene28852:CDS
TGACCAAATGTGCTACATCT+GGG 0.493927 7.4:+5404482 None:intergenic
TTTGGATGTTTGCTTCCTCA+AGG 0.494996 7.4:-5414718 MS.gene28852:intron
TTGTGCTGCTGCCAAACCCC+TGG 0.495622 7.4:+5411573 None:intergenic
TATGAAGGTGTCTGGACGGA+TGG 0.496015 7.4:-5403993 MS.gene28852:intron
TGGTCCATGTCAAAATTGCT+TGG 0.496268 7.4:-5406486 MS.gene28852:CDS
GTTGAAGATTTATCATGTTG+AGG 0.501233 7.4:+5413545 None:intergenic
AGTTTGCATATGCAATTCCA+TGG 0.501496 7.4:-5406743 MS.gene28852:CDS
CTGTTTACCTTGTTCGAATG+TGG 0.501936 7.4:-5414325 MS.gene28852:CDS
TCCAACTTTACTGATTTCAG+TGG 0.503304 7.4:-5406334 MS.gene28852:CDS
GAAATGGAGAGGCAGCTATT+GGG 0.503374 7.4:-5411024 MS.gene28852:CDS
CATGCTAAATTATGTGAGGC+TGG 0.503543 7.4:-5411252 MS.gene28852:CDS
TGTCACTTCTTATAACTGCT+GGG 0.507649 7.4:-5411639 MS.gene28852:CDS
TGACAATTCAGTTTGCATAT+GGG 0.507831 7.4:-5414274 MS.gene28852:CDS
TGTTAATACCATAAGCGAAA+GGG 0.511090 7.4:+5405787 None:intergenic
GCAGATAACGCTTCAGGCTC+CGG 0.512937 7.4:+5403873 None:intergenic
CGAATAGCATGGTCGTCTTG+TGG 0.513606 7.4:-5413413 MS.gene28852:CDS
GGTACATTGGTTGTAGCTGA+TGG 0.513901 7.4:+5406402 None:intergenic
AATTGCATATGCAAACTTAG+AGG 0.515996 7.4:+5406749 None:intergenic
AACAATAAATATCGATTATG+GGG 0.516029 7.4:-5404512 MS.gene28852:CDS
GGAACTATCATTAGTTTGCC+CGG 0.518035 7.4:+5404606 None:intergenic
AATGTTTACATTGTGATTAG+CGG 0.518261 7.4:-5405072 MS.gene28852:CDS
TACCTCGTTAAATATTGTAC+CGG 0.522245 7.4:+5414048 None:intergenic
GCTGAGATGTCGCCAAGGTA+AGG 0.525788 7.4:+5415105 None:intergenic
CCTCGCATCATTCATCGTGC+TGG 0.526737 7.4:+5403692 None:intergenic
GATTGGATTGCCATCGGAGA+TGG 0.527384 7.4:-5411126 MS.gene28852:CDS
ACTGGATTAATAATAACGTT+GGG 0.530946 7.4:-5406781 MS.gene28852:CDS
ATGGTAGAGATAACCGTGAT+TGG 0.531318 7.4:+5411272 None:intergenic
GTTCTTAAGGTTCAATCACC+AGG 0.532140 7.4:-5414231 MS.gene28852:intron
TTGCTTGGGGAGCATGTTGG+AGG 0.533350 7.4:-5406471 MS.gene28852:CDS
TTGCTAAAGAATCTGGTGCT+TGG 0.533571 7.4:-5408509 MS.gene28852:CDS
GTCAGGGTGGTAGACGGTGG+AGG 0.534764 7.4:-5404921 MS.gene28852:CDS
CACTGGATTAATAATAACGT+TGG 0.535435 7.4:-5406782 MS.gene28852:CDS
AGCCTGAAGCGTTATCTGCT+AGG 0.537085 7.4:-5403869 MS.gene28852:CDS
GCATGTCAGTGGAAAGCCAC+TGG 0.538127 7.4:+5406172 None:intergenic
CTGAGATGTCGCCAAGGTAA+GGG 0.539241 7.4:+5415106 None:intergenic
TTCTGACTATTAGATTGTGA+AGG 0.539602 7.4:+5408940 None:intergenic
TGCGTGTACAGCATAGTTAG+TGG 0.540931 7.4:-5404583 MS.gene28852:CDS
AGCACCAGATTCTTTAGCAA+AGG 0.541913 7.4:+5408512 None:intergenic
ATTTCCTTTACCATCTCCGA+TGG 0.543707 7.4:+5411116 None:intergenic
AAATACAACAATCCCAAACT+CGG 0.544223 7.4:+5413184 None:intergenic
ACCTTTCACAGAAGAGCTGT+GGG 0.544671 7.4:+5404369 None:intergenic
GCCTGAAGCGTTATCTGCTA+GGG 0.545108 7.4:-5403868 MS.gene28852:CDS
GTTTCTATGTACAGAGGTAG+GGG 0.547064 7.4:-5411691 MS.gene28852:intron
GTAAAGCTCAATCTAACTGT+AGG 0.548252 7.4:+5411057 None:intergenic
CATGTTCAGACTGGAGCAGA+TGG 0.548299 7.4:-5408194 MS.gene28852:intron
TTCAACTGGACTTGATCAGC+GGG 0.549141 7.4:-5403958 MS.gene28852:CDS
CATGTTTCAGAGATAAAAGC+CGG 0.549233 7.4:-5404625 MS.gene28852:CDS
TGTAAACTTGTGGGACATGA+AGG 0.549276 7.4:-5413446 MS.gene28852:CDS
ATAATGCAGCGCACGTGTAT+GGG 0.549545 7.4:-5413277 MS.gene28852:intron
CTTCTTCAATGACGTTCCAG+TGG 0.549653 7.4:-5406188 MS.gene28852:CDS
ATAACCGCATTGAGTACAAA+AGG 0.551306 7.4:+5414104 None:intergenic
TTTAAGCAGTGGGTTATCAA+AGG 0.551705 7.4:-5404893 MS.gene28852:CDS
GTGATTAGCGGATCTACTGA+TGG 0.553847 7.4:-5405060 MS.gene28852:CDS
ATGTTGGAGGATCAGCTGTA+AGG 0.554309 7.4:-5406458 MS.gene28852:CDS
TATGGGCTGTTCCTACTGAA+AGG 0.555653 7.4:-5413260 MS.gene28852:CDS
CAGCTTGTCCAGGTCAGCAA+CGG 0.556780 7.4:-5411213 MS.gene28852:CDS
GGAGGAGATCTTTAAGCAGT+GGG 0.558558 7.4:-5404903 MS.gene28852:CDS
TACCTTTCACAGAAGAGCTG+TGG 0.559530 7.4:+5404368 None:intergenic
GAGATACCGGCTAGTAGAAG+AGG 0.562507 7.4:+5415048 None:intergenic
AGCATCAATTCTACTACACA+TGG 0.563304 7.4:-5404820 MS.gene28852:CDS
ATATGCTATCTGGAATATGA+TGG 0.564154 7.4:-5408167 MS.gene28852:CDS
ATGGACCAATTCTCAATACC+TGG 0.564208 7.4:+5406501 None:intergenic
TGGAAGAGGGATGCAAATAG+TGG 0.564312 7.4:-5403728 MS.gene28852:CDS
TCGATGGAATTCGTGTGCAC+GGG 0.565107 7.4:-5414881 MS.gene28852:CDS
GCCCACAGCTCTTCTGTGAA+AGG 0.565469 7.4:-5404370 MS.gene28852:intron
AGATTTATTTGGCACTGAAG+AGG 0.566451 7.4:+5404795 None:intergenic
ACAGAAGAGCTGTGGGCCGA+AGG 0.569211 7.4:+5404376 None:intergenic
GAAGTCAGGGTGGTAGACGG+TGG 0.573707 7.4:-5404924 MS.gene28852:CDS
GAGGAAGTCAGGGTGGTAGA+CGG 0.574247 7.4:-5404927 MS.gene28852:CDS
GCGTGTACAGCATAGTTAGT+GGG 0.574259 7.4:-5404582 MS.gene28852:CDS
GGAGACAGTTGACACCAGAT+TGG 0.574415 7.4:+5404647 None:intergenic
ATGGGCTGTTCCTACTGAAA+GGG 0.574449 7.4:-5413259 MS.gene28852:CDS
TTGTACTCAATGCGGTTATG+GGG 0.574700 7.4:-5414100 MS.gene28852:CDS
CCTCATTCTTGTCTGTCCAG+GGG 0.574704 7.4:-5411589 MS.gene28852:CDS
AATTAGATCCCTGACAGTCA+TGG 0.575556 7.4:+5413510 None:intergenic
ATTGCCATCGGAGATGGTAA+AGG 0.575715 7.4:-5411120 MS.gene28852:CDS
TCATCAAGAAGCTATGCAGC+AGG 0.576180 7.4:-5408050 MS.gene28852:CDS
GGACGCCGCCAGCCACCACA+TGG 0.576626 7.4:+5407861 None:intergenic
AATGAATCTTCCCTTTCAGT+AGG 0.577095 7.4:+5413249 None:intergenic
AGATATACAGAAAATAATGT+GGG 0.579058 7.4:-5406126 MS.gene28852:CDS
GCTCCTCTCATCAGGTACAT+TGG 0.580549 7.4:+5406389 None:intergenic
CACGTAGATCTCCACACGCT+AGG 0.581020 7.4:+5408552 None:intergenic
CCTTTATAAGGCTTACGTAA+GGG 0.582662 7.4:+5405608 None:intergenic
TGTTCACGTATGTAAACTTG+TGG 0.583300 7.4:-5413456 MS.gene28852:CDS
GACTCATTTGAACAAGGATG+TGG 0.583582 7.4:-5411156 MS.gene28852:CDS
TGGAGGAGATCTTTAAGCAG+TGG 0.583944 7.4:-5404904 MS.gene28852:CDS
ATATGCTGCAATGACAAAAC+AGG 0.584549 7.4:+5405638 None:intergenic
CGGGGCACAAATTATCTGCA+TGG 0.584827 7.4:-5411193 MS.gene28852:CDS
TCTCTTCCTCTTCTACTAGC+CGG 0.585096 7.4:-5415054 MS.gene28852:intron
TCGTTGGAATCAGCTTGTCC+AGG 0.585986 7.4:-5411223 MS.gene28852:CDS
GCAGCAGCACAATTATCCCC+CGG 0.586399 7.4:-5411562 MS.gene28852:CDS
CCAACTTTACTGATTTCAGT+GGG 0.587777 7.4:-5406333 MS.gene28852:CDS
GTTCACGTATGTAAACTTGT+GGG 0.587882 7.4:-5413455 MS.gene28852:CDS
TCAGCCTTAGTTTCCAACAC+GGG 0.588107 7.4:+5404727 None:intergenic
TGTCTGTTTCTGATGACCGT+AGG 0.588107 7.4:-5413379 MS.gene28852:intron
ATTGCATATGCAAACTTAGA+GGG 0.589333 7.4:+5406750 None:intergenic
GTCCATGTCAAAATTGCTTG+GGG 0.589465 7.4:-5406484 MS.gene28852:CDS
AGGAATGTATCTCTCTCCCA+TGG 0.589689 7.4:+5406726 None:intergenic
GTGTTTGGATGCATGTTTGG+AGG 0.590096 7.4:-5408854 MS.gene28852:CDS
TCTGACTATTAGATTGTGAA+GGG 0.593505 7.4:+5408941 None:intergenic
TTGTTAATACCATAAGCGAA+AGG 0.594651 7.4:+5405786 None:intergenic
TGACTTCCTCTCCCTGTGCG+TGG 0.594803 7.4:+5404940 None:intergenic
CAGCCTTAGTTTCCAACACG+GGG 0.596151 7.4:+5404728 None:intergenic
TATCTGCTAGGGCATGTAGC+AGG 0.597762 7.4:-5403857 MS.gene28852:intron
GTGAGGCTGGAGGTGCTCGT+TGG 0.598740 7.4:-5411239 MS.gene28852:CDS
CGAACTTAATGCTGCTGCTG+AGG 0.600630 7.4:-5406367 MS.gene28852:CDS
GTTTGCATATGCAATTCCAT+GGG 0.601750 7.4:-5406742 MS.gene28852:CDS
TTTCAACTGGACTTGATCAG+CGG 0.601937 7.4:-5403959 MS.gene28852:CDS
CGCACAGGGAGAGGAAGTCA+GGG 0.604321 7.4:-5404937 MS.gene28852:CDS
TGATAAGCAGCATGATGCAA+AGG 0.604570 7.4:-5406241 MS.gene28852:CDS
TAATATATATACATAGACAC+TGG 0.606481 7.4:-5406799 MS.gene28852:CDS
ACTCTGCTATCAAGGTGCAT+AGG 0.608278 7.4:-5411612 MS.gene28852:CDS
TCACCTAGAAAATAGGAATG+AGG 0.609684 7.4:+5407840 None:intergenic
CGTCATTGAAGAAGACATGC+TGG 0.609954 7.4:+5406197 None:intergenic
TATGCTATCTGGAATATGAT+GGG 0.610158 7.4:-5408166 MS.gene28852:CDS
CATTATGTCCAAATAAGACA+AGG 0.610938 7.4:+5413208 None:intergenic
ATGTGACACAATATCCCTCA+TGG 0.611791 7.4:+5408915 None:intergenic
ACACTTAATAGTTAGTGTGC+CGG 0.612135 7.4:-5403892 MS.gene28852:CDS
TGAAGATTTATCATGTTGAG+GGG 0.612802 7.4:+5413547 None:intergenic
AGATTGCTGTTGCTGGAAGA+GGG 0.612964 7.4:-5403741 MS.gene28852:CDS
AAAACCCAATGACCAAACTT+GGG 0.613032 7.4:+5414738 None:intergenic
TCTGGTGAAGATGCCAGCAT+CGG 0.614137 7.4:+5403934 None:intergenic
AAGACCGACGCTTAATCGAA+TGG 0.614837 7.4:-5415143 MS.gene28852:CDS
TATTTCACATATTTCCGCTG+AGG 0.614840 7.4:+5404699 None:intergenic
AAATTGCTTGGGGAGCATGT+TGG 0.615187 7.4:-5406474 MS.gene28852:CDS
TGATTAGCGGATCTACTGAT+GGG 0.616349 7.4:-5405059 MS.gene28852:CDS
CAGATATACAGAAAATAATG+TGG 0.617032 7.4:-5406127 MS.gene28852:CDS
AAAACATCTCTGTTCTTCCG+GGG 0.617720 7.4:+5411545 None:intergenic
TCCAAGGACTCATTTGAACA+AGG 0.618385 7.4:-5411162 MS.gene28852:CDS
GATTGTACATGTCGTATATG+GGG 0.618528 7.4:-5412314 MS.gene28852:CDS
GGACATTTCCAATTCTAATG+CGG 0.620070 7.4:-5414253 MS.gene28852:CDS
TTGCAACTGGATGTGAAGAC+GGG 0.620552 7.4:-5406631 MS.gene28852:CDS
ATTGCAACTGGATGTGAAGA+CGG 0.621857 7.4:-5406632 MS.gene28852:CDS
CTTGGCAAGCTGAAATGGAG+AGG 0.623202 7.4:-5411035 MS.gene28852:CDS
AAATGGATCAATGTTAACTG+TGG 0.624822 7.4:+5414765 None:intergenic
AATACAACAATCCCAAACTC+GGG 0.628246 7.4:+5413185 None:intergenic
AGAGAGCTGAGATGTCGCCA+AGG 0.629859 7.4:+5415100 None:intergenic
TCACTCTCCACATTCGAACA+AGG 0.630421 7.4:+5414318 None:intergenic
CTACCATGCTAAATTATGTG+AGG 0.633890 7.4:-5411256 MS.gene28852:CDS
CAGCCTCACATAATTTAGCA+TGG 0.634362 7.4:+5411253 None:intergenic
CGTGTACAGCATAGTTAGTG+GGG 0.634510 7.4:-5404581 MS.gene28852:CDS
ATATTTGGTTGGCATGTCAG+TGG 0.634581 7.4:+5406161 None:intergenic
TTTACAACTGACCCCAGAGG+AGG 0.635398 7.4:-5408988 MS.gene28852:CDS
AAGCTTAGTTACAACAACGC+TGG 0.636558 7.4:+5408412 None:intergenic
CCAGAAGACCATGACTGTCA+GGG 0.636656 7.4:-5413518 MS.gene28852:CDS
ACGGGACTGTGAGATTGACT+TGG 0.637311 7.4:-5406613 MS.gene28852:intron
TGAACAAGGATGTGGTGATG+AGG 0.639310 7.4:-5411148 MS.gene28852:CDS
ATCAGCCTTAGTTTCCAACA+CGG 0.640059 7.4:+5404726 None:intergenic
CCCCTGGACAGACAAGAATG+AGG 0.640294 7.4:+5411589 None:intergenic
AAAAGAAGCAGCAATGGCGA+CGG 0.640852 7.4:-5415169 None:intergenic
GACCAAATGTGCTACATCTG+GGG 0.641048 7.4:+5404483 None:intergenic
TCATATCAAGTTATGGAATG+CGG 0.642708 7.4:-5408882 MS.gene28852:CDS
ATGTTTCAGAGATAAAAGCC+GGG 0.646123 7.4:-5404624 MS.gene28852:CDS
AAATTCCATGTGGTGGCTGG+CGG 0.646824 7.4:-5407866 MS.gene28852:CDS
TATTTGCAGGTCCTAGCGTG+TGG 0.647675 7.4:-5408563 MS.gene28852:intron
CAACCAATGTACCTGATGAG+AGG 0.648622 7.4:-5406392 MS.gene28852:CDS
AAACATCTCTGTTCTTCCGG+GGG 0.652252 7.4:+5411546 None:intergenic
GTTTATTGTCACTGTCAGTG+AGG 0.653378 7.4:-5412336 MS.gene28852:CDS
GACGCCATTCGATTAAGCGT+CGG 0.656410 7.4:+5415139 None:intergenic
TGTTTCTGTTGATAACAACT+CGG 0.657144 7.4:-5408081 MS.gene28852:CDS
GTTCAATCTTCCGAATAGCA+TGG 0.658501 7.4:-5413424 MS.gene28852:CDS
GATGAGGATTGGATTGCCAT+CGG 0.659201 7.4:-5411132 MS.gene28852:CDS
ATGCTATCTGGAATATGATG+GGG 0.665434 7.4:-5408165 MS.gene28852:CDS
CTAATAGTCAGAACTCCATG+AGG 0.666334 7.4:-5408930 MS.gene28852:CDS
GTGGTGAAAATTCCATGTGG+TGG 0.667441 7.4:-5407873 MS.gene28852:CDS
CCTTTAAAATGATTTACTGG+CGG 0.668719 7.4:+5408458 None:intergenic
ATCTTCGTGTATAAAGCACA+AGG 0.673269 7.4:+5406706 None:intergenic
GAGGAGGATTGAAACTCTGG+AGG 0.674506 7.4:-5408972 MS.gene28852:CDS
AGAGTTTCAATCCTCCTCTG+GGG 0.675928 7.4:+5408977 None:intergenic
TAATAGTCAGAACTCCATGA+GGG 0.677688 7.4:-5408929 MS.gene28852:CDS
TCAGTCAATTCATCATCTCG+TGG 0.680018 7.4:-5404551 MS.gene28852:CDS
ATCGAATGGCGTCTGCATCG+TGG 0.680293 7.4:-5415129 MS.gene28852:CDS
ACTAACTATGCTGTACACGC+AGG 0.686832 7.4:+5404585 None:intergenic
GGGTTATCAAAGGAAAGACA+AGG 0.689913 7.4:-5404883 MS.gene28852:CDS
GATATACAGAAAATAATGTG+GGG 0.690770 7.4:-5406125 MS.gene28852:CDS
ATCCGGTACAATATTTAACG+AGG 0.691138 7.4:-5414050 MS.gene28852:intron
ATTATGTCCAAATAAGACAA+GGG 0.691385 7.4:+5413209 None:intergenic
ACAGGGAGAGGAAGTCAGGG+TGG 0.706581 7.4:-5404934 MS.gene28852:CDS
GCATCAATTCTACTACACAT+GGG 0.707863 7.4:-5404819 MS.gene28852:CDS
GTGTACAGCATAGTTAGTGG+GGG 0.709739 7.4:-5404580 MS.gene28852:CDS
TTGGGACCTGACTGACAGTG+TGG 0.711195 7.4:-5405025 MS.gene28852:CDS
GCTTGTCCAGGTCAGCAACG+GGG 0.712622 7.4:-5411211 MS.gene28852:CDS
GTCTTTACAACTGACCCCAG+AGG 0.713039 7.4:-5408991 MS.gene28852:CDS
CTTGGTCAGAGATAAACATG+AGG 0.717706 7.4:-5406016 MS.gene28852:CDS
CTAGCGTGTGGAGATCTACG+TGG 0.721092 7.4:-5408551 MS.gene28852:CDS
TAAGGCTGATGATTCCTCAG+CGG 0.730278 7.4:-5404713 MS.gene28852:CDS
AGCCTTAGTTTCCAACACGG+GGG 0.749801 7.4:+5404729 None:intergenic
GCTAAATTATGTGAGGCTGG+AGG 0.783887 7.4:-5411249 MS.gene28852:CDS
CAGGTGGTGAAAATTCCATG+TGG 0.823557 7.4:-5407876 MS.gene28852:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.4 gene 5403699 5415178 5403699 ID=MS.gene28852
chr7.4 mRNA 5403699 5415178 5403699 ID=MS.gene28852.t1;Parent=MS.gene28852
chr7.4 exon 5415055 5415178 5415055 ID=MS.gene28852.t1.exon1;Parent=MS.gene28852.t1
chr7.4 CDS 5415055 5415178 5415055 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5414719 5414969 5414719 ID=MS.gene28852.t1.exon2;Parent=MS.gene28852.t1
chr7.4 CDS 5414719 5414969 5414719 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5414232 5414349 5414232 ID=MS.gene28852.t1.exon3;Parent=MS.gene28852.t1
chr7.4 CDS 5414232 5414349 5414232 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5414051 5414133 5414051 ID=MS.gene28852.t1.exon4;Parent=MS.gene28852.t1
chr7.4 CDS 5414051 5414133 5414051 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5413380 5413588 5413380 ID=MS.gene28852.t1.exon5;Parent=MS.gene28852.t1
chr7.4 CDS 5413380 5413588 5413380 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5413176 5413290 5413176 ID=MS.gene28852.t1.exon6;Parent=MS.gene28852.t1
chr7.4 CDS 5413176 5413290 5413176 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5412275 5412357 5412275 ID=MS.gene28852.t1.exon7;Parent=MS.gene28852.t1
chr7.4 CDS 5412275 5412357 5412275 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5411499 5411699 5411499 ID=MS.gene28852.t1.exon8;Parent=MS.gene28852.t1
chr7.4 CDS 5411499 5411699 5411499 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5410994 5411353 5410994 ID=MS.gene28852.t1.exon9;Parent=MS.gene28852.t1
chr7.4 CDS 5410994 5411353 5410994 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5408849 5409017 5408849 ID=MS.gene28852.t1.exon10;Parent=MS.gene28852.t1
chr7.4 CDS 5408849 5409017 5408849 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5408385 5408576 5408385 ID=MS.gene28852.t1.exon11;Parent=MS.gene28852.t1
chr7.4 CDS 5408385 5408576 5408385 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5408001 5408207 5408001 ID=MS.gene28852.t1.exon12;Parent=MS.gene28852.t1
chr7.4 CDS 5408001 5408207 5408001 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5407803 5407895 5407803 ID=MS.gene28852.t1.exon13;Parent=MS.gene28852.t1
chr7.4 CDS 5407803 5407895 5407803 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5406614 5406828 5406614 ID=MS.gene28852.t1.exon14;Parent=MS.gene28852.t1
chr7.4 CDS 5406614 5406828 5406614 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5405961 5406530 5405961 ID=MS.gene28852.t1.exon15;Parent=MS.gene28852.t1
chr7.4 CDS 5405961 5406530 5405961 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5405796 5405876 5405796 ID=MS.gene28852.t1.exon16;Parent=MS.gene28852.t1
chr7.4 CDS 5405796 5405876 5405796 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5405609 5405694 5405609 ID=MS.gene28852.t1.exon17;Parent=MS.gene28852.t1
chr7.4 CDS 5405609 5405694 5405609 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5404371 5405111 5404371 ID=MS.gene28852.t1.exon18;Parent=MS.gene28852.t1
chr7.4 CDS 5404371 5405111 5404371 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5403858 5404008 5403858 ID=MS.gene28852.t1.exon19;Parent=MS.gene28852.t1
chr7.4 CDS 5403858 5404008 5403858 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
chr7.4 exon 5403699 5403774 5403699 ID=MS.gene28852.t1.exon20;Parent=MS.gene28852.t1
chr7.4 CDS 5403699 5403774 5403699 ID=cds.MS.gene28852.t1;Parent=MS.gene28852.t1
Gene Sequence

>MS.gene28852

ATGGCGACGGAAGAAGACCGACGCTTAATCGAATGGCGTCTGCATCGTGGCCCTTACCTTGGCGACATCTCAGCTCTCTGCTTTCTTCATCTTCCCAATCACTCTCTTCCTCTTCTACTAGCCGGTATCTCGTTTTCTTCTACTTCAAATTTCACTTCAATTTCAATTCAACAATCGATTATTCTCATTCATTTGCTTCATAATTTTAGGTTTGGGTTCGGAGATTTTGTTGTACGACTTAGAATTTGGGAAGATAATGAAATCGTTTTCGGTTTTCGATGGAATTCGTGTGCACGGGATTGCTTCTAGTTTTGAATCTGTGATTGTAGTGTTTGGAGAGAAAAGAGTGAAAATGTTTCGGTTTTCGTTTGAAAATGACGAGTTTGGGAGTCCACAGTTAACATTGATCCATTTGTTGCCCAAGTTTGGTCATTGGGTTTTGGATGTTTGCTTCCTCAAGGTGAATAATATTCACTCATATTTACATTTCTGTATGAGCTGTCAAAATAAGAGAATAATTTGGATGATTAACGCAATTCAAATACATGTTTAGTTACATTTGGTGGATGATTTGTTTGCTTACGATTAATTACATTCGGTGAATGATTGATTAATTGCAACATCTTGTTATAACGTATGTTCTTTAGCTATCTGCTGAATGTAATTAAGCACATATTTAAACTGCGTTAACCATTTAAAATTGTTGTCAAATTTGTGTCAAAATTTCATTTATGTTCTGAATAATGAATGCTTCTTTCGTTCTAACTTGTGTTTGTAAGTTTTATTTATTGATTTTTTTTGTTGCTTGCGACTTGCCACTTGGTAGTAGGGCTGTTTACCTTGTTCGAATGTGGAGAGTGATTTTCTTGCTATAGGATGTAGTGACAATTCAGTTTGCATATGGGACATTTCCAATTCTAATGCGGTTCTTAAGGTTCAATCACCAGGTTGGTTTCAATTTTACTGCATGGCATTGGTTTCATTTTTTCTTAAAATATTCTTCTATATCTAATGAGTAACTATTTGTCATTGGATGGGATCATAGTACGATGCCTTTTGTACTCAATGCGGTTATGGGGTCACAATCTTGAAGTTCTCCATATTGCATCCGGTACAATATTTAACGAGGTAAGGAATCGTCTGATACTTGATGTTTGTTCATTTTTGAGTTTGATATCGCATTGAATTTGTTTTCAACATTCTGCTTCAAGTCCGTCTCTGATCATCCCCAGAATAACTTTTGACTTCCGCAGACTTTTAAAACCACACTTCAGAAATACTAAAGCAGTTCAAGTTAATCACAATTATCATCTTGGTGGAATACGACATAATTACTGTTGTACACATAATACGACACTACATTGTTTTTTTTTTTTCCCTCTGTTTTAAGTTCATGCATTAAGGATCTATTTTCTGCACATTGTATCTATATGCTTTACCAAAACTCTACCTTTAGTTTCTACGTATAATCATTGTATTTTAGCTATTATACTTTATATCATCTTTGTAAAAATTTCTTTCTGATCTGTTGTTTAATGTGTCCACCTTCCGATTTTCGTTTAATTACTTTAAAGAGTTTGGTTCGGGCAGATTGTCGTTTGGAAAGTATCCCCTCAACATGATAAATCTTCAACAACTCCAGAAGACCATGACTGTCAGGGATCTAATTGCAGCTCACTAAAAGATAATATATATGAGGCTGTTCACGTATGTAAACTTGTGGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGATCTAAACTTCTGTCTGTTTCTGATGACCGTAGGTGAGTTAGATTTTCAAATCCTATTGTATCAATTATCAGATATTTATATTCATCTAACAATACATGCCATGATAACTTTTATAATGCAGCGCACGTGTATGGGCTGTTCCTACTGAAAGGGAAGATTCATTGTACAATGATCCCATTGCCCTTGTCTTATTTGGACATAATGCCCGAGTTTGGGATTGTTGTATTTCTGATCATGTAAGCCATTCATTTCATGCTTATGAAAAACTTAATCCTAAAAAAATAGTTTCTGATGTTATTTTAACTCTTTAAGTTTTTGTTCATCATATCATGTTGTGCTCTTTTACCACCCAACAAAAATGGGTAAATCATTATATAGTATACTTTTATAGATATTTTTTAAGTTTGTTAGAAAACTATATCGTTTTTTTTAGTTAAAAGCCTCTCTATAGACAGATCTTATCGCCAAGACCAGATTTTTAATGCTAATTATCTCCCTTATTGGTGCTGCTTTCATCAAGATAAGTGGCTTAGCCACTTCTATTTTGTCGGATCACTTGTATTTTGCAATCTCTAACTTTAATTATCACCGAGACACTGCATAAATGTTGAAATGTGCAGTAATATTTCTTAAGACATCCATGTGCTGCTAACTTAAATCATAGTATCGTTCACGTGTTGATATTATCAATTATTTCTTTTCACTGGTAGTTTATAGTCTTCACATATAAAAATAAACTTACACATTAATGTATTTTTATTTATCTCATGACTGTTTCATTACTATAAATAATAAATATATGTTTTGTAATTGATAAATTCGTTCTTCAAAATATGGTAAATTGTCTTCAATTCAATATTACAAATTTATCAGTATTTAAAATTAACCACAATTTCAGTGGATAATATAAAACTAGTTACGAAAACATCATTTGAAATGTATTTGACAACATTAAAATTGTACTTGTACTGTGTTCAGTTTTCTGCTTAATTATCAATTTATATTGTTAATTCATGCTATTGCAATATCCCTTTTCTAATTATTTTTTGTGCAGTTTATTGTCACTGTCAGTGAGGATTGTACATGTCGTATATGGGGAATTGATGGCGAACAGCTGCAAGTCATTAGAGAGCACATGTAAGTTCTAGATATGGATTATTGATTGTTCAGTATTAAATTTCTATTTGTCGATTAATTGAAGTTCTGTGGATCTGATCGAATAAACATTGGCTATAATTTATTGTCTGGACTTCTCAAGTTTTGAAATCATGTGAACTTAGTATCTACAGGAAACAATTGCTATAAATATGTTATCTTGAGTCTCTTGGACTTGTAAATTGTATTTTATATAATCAACCTTATGTTTACCCCCCTTAAAAGACCTGACTCAAAAATATATCATTTCTTAATGTTATTGGTTCTTTTGATTCGCTTTAATTTTGCTGTATGAGGTTTAAATGACGGGGTTTCTTACAAATAGATGTTTGAATTCTATCCTTTCTGAATGTTAAAGATGATTAAAAGAGTGATTACTCGCAAGTTGAATAAAATGAACTTCTCTATTTGTTTTATATCTTCTAATTATTGTGTGGTACTGCATTACAAGAGTCATAATGTGTGTGCTACTCAAGTTGTTTTCTCTGTTAGGCTTTTGACATCAAATCTTATTTTCATGTCTTTTTAATGAAATGTGTATTGGTTTCTATGTACAGAGGTAGGGGTATATGGAGATGTTTGTATGACCCAAATTTGTCACTTCTTATAACTGCTGGGTTTGACTCTGCTATCAAGGTGCATAGGCCTCATTCTTGTCTGTCCAGGGGTTTGGCAGCAGCACAATTATCCCCCGGAAGAACAGAGATGTTTTCCATTTGCATCCCTAATATGTTGGAGCATATTGGATTGACAGACAGGTAGGATAATTAAATTTGATTAGCTCACTTTGGATGCCCTGTAACATTACAAACTTTTTAATTGATTTTGAGATGCCATTATCTAAGTCAGTTGTGTTTGCCATATCCATGTTGACTGGCCTTTTTGCCTCCTTATTTGTTGCAGCAAGAGTGAATACGTTCGTTGTTTGCGTTTTTCATCTCAGGATTCTCTTTTTGTTGCTACCAATCACGGTTATCTCTACCATGCTAAATTATGTGAGGCTGGAGGTGCTCGTTGGAATCAGCTTGTCCAGGTCAGCAACGGGGCACAAATTATCTGCATGGATTTATTGTCCAAGGACTCATTTGAACAAGGATGTGGTGATGAGGATTGGATTGCCATCGGAGATGGTAAAGGAAATATGACAGTTGTTGTAGTTACTAACAATGATTGTGCTCCTACAGTTAGATTGAGCTTTACTTGGCAAGCTGAAATGGAGAGGCAGCTATTGGGTACTTATTGGTGCAAATCTTTGGGATCTAGGTAATGAATTGCCTTATCTTATCTTTCGATAATAGCATCTACTTATTTACAAGATGCTTTGAGCTTAAGCCACACATAGATAAGTTGTGCAAGTCGATGCTGTGTCAACCAATTCTTTTTTACCCACTGCCTGATAACTGTCCTGTCCTCACTATCAAAATGTGTAATATTCATGAAAGATCTCCGTTGTTATCCACACCATTATGAGACTCCTGGGGAAAAAAAAAATAGACCTATTGCTAGTGTAGTTCAAGTCATCTCTCTCTATTTGGTTAGAGCCGTGCTATACAGCACGACATCCCTTCCCACACGACAAGCACGACAGTAATTTACATGCAATTTGCTTTGTAAAAACAAATGTGTCAAAACACCAGTTTGCTTTTTATTCATCATGATACAAATTCTAAAGCATTATAGTAATAAAATAAGATAATATAAATACTATCTTTAGTCAAAAAAATAAGATAAATACCGGTAGTATTAGACAAGAAAAACACACTCAGTATATGATTTGGAGATGCCCAATTCACCACCACAGGATACTTAATTTGTGATTTCTTTTTGGAAAAGTGCATCATTAATTTAATGGGTCATTTTGCTTCAAAAAAAATTAAGAGAGCCAGATTAAATGACCTTCGTGCTAATTCAACGAAAAAAATTGTCGTGCATATTAGTATTTCTCATTTGGTTAACTAGCCATCAAGATTATACCAAGTTAAGCATAATCATCAATAGTTTGTTAGCGATATATTATGCGGCGCAATCAAATGGGAGATCCTAGTGTTTTCTTCTCTTTTATAGTTTACCCCATTCAATTTATTATATTACTGCTATTTATTATTGATATTGTTGTTGTAGTAATAATAATAATAATAATAATTATAATTATTATTGTTATTATTACTATTATTATTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTCTTTTGCTTTTGTTAGAATATCTATACTATATATAAAGAAAATAACCCCTTTGAGCTCTTTTGGGCTGACTTTTTCTCTTTCCAAAAATGCCCTCAATTTTCAATATAAATAACACATGTAACAAATAGATAAGAATAAATTTAAATATTAAAAAAAAATGTAACAGACACGACGCGAATATATATGTCTGTTTTTTTTTTCTTTATCATTTAAAAAGTGTAATAAACTAGATGAGTATATTTATACTTACTTTTTCATTATCCCAATTGTACCCTTAAACAACTTTTTTTGTAATAAAGATTGTTGTTGGTGTCATTAAGAAAAAGAATTTAGATTATATTTTTTTGTTATATTGTTAGTTTGGTTGTTATAACTTGAAAGCAACAAATATTTATCTTTTTAGTTTTAATCAAAATTTCATAAAAAAAACACCGTTCATAACTTTCAAACGTTAGCGCAATAAAAAGAGCGGAAAGACGTGCACATGAGTGCCCGTCTTTTCGCTAGTAATTATAATATCTTGATATCAACCCGATTCTCTAAGAGTGTGTTTGGATGGCGTAATTGGAAATTTTAGAGAGTTTAGAATTCTACGCAATTGAAATTATTCAATTAATTTGCCTTCATTTCTAAATCTTTTTTTTTGGATAGAGTAATAAAAAATTTCATTGTTATTTTTCGGCTACTTATATAAATGTGACAAAATTTGGGTCAAATTTGAAAATTGAAAAATAGGCTTGGTGTTTAGCATAGTATCTTAGACTATCTCTTAAAACTAGTTTCCATATTTCTTTATTATTATCATTATTTGTTTCCCTATTTAAATAGGATTTGCAGTCTTGTATTATTATAAATAATTGTTATAGTTTAGTGTATCATCAATCATATCAAACCTTAATCAAGTTATTCATCTTTTTCTACACACTTTATCTAAACTCTATAACTTCAACAACTTTGTTTCAAACTAATTAAGTGAATGTATTTTTGCCATTCTTTGGTGACACAATCATGTAGGTATGTCTTTACAACTGACCCCAGAGGAGGATTGAAACTCTGGAGGTTGCCTGACCCTTCACAATCTAATAGTCAGAACTCCATGAGGGATATTGTGTCACATGCAGCAGAATTCATATCAAGTTATGGAATGCGGATAATGTGTTTGGATGCATGTTTGGAGGAAGAGGTATTCATCTTCTCCCTTTTTACTTTTTTATCTTGTTGGGGGTTAGTTATGTTCGGTATTGCTTTGATGAAACCTGACTTTATACACAATTAAAATACCATTTTAACAAAAACTTCTTTTATGTAAAGGTCGGCCCTGACATTGTTCAACAACTAATTGTGAGGAACAGCATCATTTTGCCCTAAAACTGTTATTAATTTTGGCCTTTTAATTTTAACTGACTTATAATTTAAAAAGGGAATCTCATTTGGAATCTGGATATGTATTTGCAGGTCCTAGCGTGTGGAGATCTACGTGGAAATATGGTTTTGTTTCCTTTGCTAAAGAATCTGGTGCTTGGTACATCTGTTGCACAAGAGATGAAAATACCGCCAGTAAATCATTTTAAAGGTGTTCACGGGATTTCAAGTGTCTCCAGCGTTGTTGTAACTAAGCTTGGTTATAATCAAATTGAGATACGCTCAGTATGTTTAACTATTCATCCTTCAAATTGAGATAAGATTGGATACAATCAAATTCAAATTCAGATATAAGCATTTTGCAAACAATAACATCAAGAGCACAGTTAATATCAATCCATCAATTAAAGTTATGAATATGCTCCACTCTAATTCCAATTGTTGACTTTTATTCATGTTCAGACTGGAGCAGATGGTTGTATATGCTATCTGGAATATGATGGGGAAATGCAGAATTTGCAATTTACGGGAATGAAACAAGTGAAAGAGTTGTCTTCGATTGAGCATGTTTCTGTTGATAACAACTCGGAAGATACATCATCAAGAAGCTATGCAGCAGGTTTTGCATCTGTAGATTTCATAGTATGGAATTTAGTCAATGAGAATAAGGTACTTTGACTATTTTTTCTCTTTACTCTGCTTAGTTTGTATTCATCTGTTGCTGAGTACATCAACAATTATGGCTACGATATCATGTGCATATGGTATTATCAGGTGGTGAAAATTCCATGTGGTGGCTGGCGGCGTCCTCATTCCTATTTTCTAGGTGATGTACCAGAGATGAAGAACTGTTTTGCTTTTGTTAAGGTTTGCTTTTTGTTTTGAACACTTAATTGACAAACATTAAGCAATATATATTTCTGTAAGCTTTACCTATCCTAAATCATATGACACCTGCTCATACTGAAAAAGTTACACTCTTCCAAAAATTCTTTAGAGGGACGACTATAATTCATATTTGAGGTCATTATATGCATTTGGTTTTGGCTTGAATAGGAATTCCATACAATTGCTTTAAGGCCTCACTTTTTGATTGGTTAAACCTAATAATGGGGATAGACCGGATACAGTTAAATAAAAGGATTTGGCTCCTCTATAGTGGGGTGTACTTTAGAGAGTAAAGTGCAATTATAAGTTGATAACCGTCGATTTAAAAACCGGTTGAGATTGTGGTAAAATACATGCATAGATAACAAATTATGAATTTTCAATAAATGGTTATAATTCCAGATTTATGACGTGTTTAGTTTCACATTTAAAATCATAGACGTGCGTTTAGAGCTGTTTTTTCCGTGAATTTAAAGAAGCTAGAAATCCTAGCTTTTGGTGGACGCACGTCTAAATCTGTTTCTGCCGTGGAAACAGATACTTAATCCTTTGAAGTGCATCCTTCACTTTAGAGCAACCAAATCCTCAATCAAAGTCAGTTAAACATGATTGCCTTCTTGATATGTGCAGTTTTCAGCTTTCAAAATTTTCCATCCATACATATCCATGGGGATCTGAAACAAACAATTTTCCGTATACTTATTGTTAATCTCCCTTTATTTTATTGCTTCAGTAACATGGGTGTTGTGAAAAGTTGGAAAAAGTGTTAAAATTATTGCTACACTTTTAGTGTTAAATTTCAACTCTAATTTTAGCAGTAGCTACTTTTTAAGCTTTGCCAATACCCACCTTTTTATTAGACACCAGTCCTATTTTCTTGTGGGTGGTTGTTCTTTTGTTATCACAAATTTATTTTTCTGAATATCCATCACAAATCATTCCAACTTTTACAGGATGAAATAATATATATACATAGACACTGGATTAATAATAACGTTGGGAAGATATACCCTCTAAGTTTGCATATGCAATTCCATGGGAGAGAGATACATTCCTTGTGCTTTATACACGAAGATATGCTTCTAGGAGATTATTGTAAACGTGCATCATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAAGACGGGACTGTGAGATTGACTTGGTAAAACCATTATTCTCTGCTGCGTGTAGATCTCATTTGAGTACCTCATAAACTCCTAATGTGTGTCTGTTTGTTTGATTTAGGTACTCTCCAGGTATTGAGAATTGGTCCATGTCAAAATTGCTTGGGGAGCATGTTGGAGGATCAGCTGTAAGGTCAATTTGTTGTGTTTCGAAACTACACATCATTCCATCAGCTACAACCAATGTACCTGATGAGAGGAGCGAACTTAATGCTGCTGCTGAGGACAAAGATAATCCAACTTTACTGATTTCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGCTACTTAAAAGCAGGAAACTGGATAACAAAACTAACTTCCGAACTGATAAGCAGCATGATGCAAAGGAACTTGATGATCAATTTTTGTCCAGCATGTCTTCTTCAATGACGTTCCAGTGGCTTTCCACTGACATGCCAACCAAATATTCAAGTACACACAGATATACAGAAAATAATGTGGGGAAAGCAGTTGATGTTGCTGAAAATGGTTCTAAAATAAAAATTGATGCTGAGGCTGGATCACTGTTTTCTGAAGGGGGGACAATGAACTTGGTCAGAGATAAACATGAGGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTGCTGGTTCCAGGTTAGAGGAGATGCCTAACATTTGCGTCTTGGTTCCGTATAACTCATAATTTGAAACTAAAGTTCTATTTTGTATATTTTTCAGGATATCTGTCTGTTTTGTTGTCGTTGCTTGTTCAGATGCTACAGTTATGTTACGGGCTTTAATTTTACCCTTTCGCTTATGGTATTAACAATTATTTCCATCAAATTCTATGAACTTTTTCTCTGCTTTCTTTTATTTCTTGTTACATCTTACATAGCTCTTTCCCTTTTACTTGATGACAGGTTTGACGTTGCATTACTTGTTCCTTTATTGGCACCTGTTTTGTCATTGCAGCATATCATCTTTCCCTTACGTAAGCCTTATAAAGGTTTGTCTTGCACTCCATTTAAGTGATTGGTTATGAGAGCTGTGAACCACTTAATCCCTTCTTTTCATATGGATGTAGAAGTTCTGTTGTAAATTGTAATGCTACTAGAATTCTTGAAGCTCGTCTCTTCAAAATTTAAGGCGGTACTTACCTGTTACCGAATATCACAATTAATGGTGAAAAGACTCAAATGTATGATGTACTCATCACGAAAGCCTAAATTGAAAGATGAAATTGTCTCAATATTTTGGTTTACTTATGATCGTGGGCTTTTTTACTAGTCCAAGGATCGTATTATAAAATAGTGTGATAGGTAGCCTCTTTAGTGCCTGTCTCCACCTTGTTCCTCAGTATATGAAACGAAAGATATTATTTGTTAAGATGAATGTCCTGTTCCTTTGTCATACCTTTTAAAATATATACTAGAATAAATTTAGAGGTTCTTCGTATATTTTCTGCCTGATCTATTTCCCTGCTTTAATATGTTTCTTTTGCAGATAACATCAAAGTTGGAAATGTTTACATTGTGATTAGCGGATCTACTGATGGGAGTGTTACATTTTGGGACCTGACTGACAGTGTGGAAGCTTTTATGCAGAGCGTTTCAGTTTGTGATGTAGAGAAGCTTTTTGATTGTCAAAAACGACCACGCACAGGGAGAGGAAGTCAGGGTGGTAGACGGTGGAGGAGATCTTTAAGCAGTGGGTTATCAAAGGAAAGACAAGGCAACAATCAGGTGACTTCAAAAGCCAAAAACAAGGCCGAAAGCATCAATTCTACTACACATGGGACCTCTTCAGTGCCAAATAAATCTGAAGACAACAATATGGTTTGTTCTCAAACCAGACATACAGCTTCCCCCGTGTTGGAAACTAAGGCTGATGATTCCTCAGCGGAAATATGTGAAATACAACCTCTACACCTTTTGAAAAATGTTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAAGCCGGGCAAACTAATGATAGTTCCTGCGTGTACAGCATAGTTAGTGGGGGAGATGATCAGTCAATTCATCATCTCGTGGTTGAGTTATCAACTAAAACAATAAATATCGATTATGGGGTTTTAACCCCAGATGTAGCACATTTGGTCACTGAACCTGAATACTTGAAGGACACCAATTTTCAAAATCATAGCAGAAACTACGAGATCAGATTCTTAAATTCTGAAAAATTTCCTTCGGCCCACAGCTCTTCTGTGAAAGGTAATTCTGTGAAATTAAATTTCCCTATCTACCTACTTTTTGTGTGTCAATAATGAACAGTCGGCAAGGCATGACAGGCTTTCTTTGTCTGACACAATGCTTTGTTGGCTTTCCCACTAATTTTTTTCATTTACTTCATCTAGCATTTTGTCCCACTGAGAATCTTAAACCTATCATTCCCGATAGGACTGATCCTTGTTATGATAAAATGATAAAGTATTCAGAATACTTGTGAACCATATCCATTTGAACCACTTTATCAAATTGAAGCTAGTGTATGGATGTCTGAACTTCTAGTATATTTATGAAAGAAAGTTTGGTCAGTTTTGTATGACTATCAACTTTTATTTTATTTTATGAAGGTGTCTGGACGGATGGATCTTGGGTGTTTTCAACTGGACTTGATCAGCGGGTCCGATGCTGGCATCTTCACCAGAGTAAACTAATAGAACGTGCACACTTAATAGTTAGTGTGCCGGAGCCTGAAGCGTTATCTGCTAGGGCATGTAGCAGGTGATTATTATAGGAGTGAATGACTGGGTTGGGTGATATATCATATTGTTCTTTCTCTTAACACTTGCTGGTCCCTTACGCAGGAACCATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAAATAGTGGACTTCTCAGGATGCCAGCACGATGAATGA

Protein sequence

>MS.gene28852.t1

MATEEDRRLIEWRLHRGPYLGDISALCFLHLPNHSLPLLLAGLGSEILLYDLEFGKIMKSFSVFDGIRVHGIASSFESVIVVFGEKRVKMFRFSFENDEFGSPQLTLIHLLPKFGHWVLDVCFLKGCLPCSNVESDFLAIGCSDNSVCIWDISNSNAVLKVQSPVRCLLYSMRLWGHNLEVLHIASGTIFNEIVVWKVSPQHDKSSTTPEDHDCQGSNCSSLKDNIYEAVHVCKLVGHEGSIFRIAWSSCGSKLLSVSDDRSARVWAVPTEREDSLYNDPIALVLFGHNARVWDCCISDHFIVTVSEDCTCRIWGIDGEQLQVIREHIGRGIWRCLYDPNLSLLITAGFDSAIKVHRPHSCLSRGLAAAQLSPGRTEMFSICIPNMLEHIGLTDSKSEYVRCLRFSSQDSLFVATNHGYLYHAKLCEAGGARWNQLVQVSNGAQIICMDLLSKDSFEQGCGDEDWIAIGDGKGNMTVVVVTNNDCAPTVRLSFTWQAEMERQLLGTYWCKSLGSRYVFTTDPRGGLKLWRLPDPSQSNSQNSMRDIVSHAAEFISSYGMRIMCLDACLEEEVLACGDLRGNMVLFPLLKNLVLGTSVAQEMKIPPVNHFKGVHGISSVSSVVVTKLGYNQIEIRSTGADGCICYLEYDGEMQNLQFTGMKQVKELSSIEHVSVDNNSEDTSSRSYAAGFASVDFIVWNLVNENKVVKIPCGGWRRPHSYFLGDVPEMKNCFAFVKDEIIYIHRHWINNNVGKIYPLSLHMQFHGREIHSLCFIHEDMLLGDYCKRASFSKSSWIATGCEDGTVRLTWYSPGIENWSMSKLLGEHVGGSAVRSICCVSKLHIIPSATTNVPDERSELNAAAEDKDNPTLLISVGAKRVLTSWLLKSRKLDNKTNFRTDKQHDAKELDDQFLSSMSSSMTFQWLSTDMPTKYSSTHRYTENNVGKAVDVAENGSKIKIDAEAGSLFSEGGTMNLVRDKHEDDWRYLAVTAFLVKCAGSRISVCFVVVACSDATVMLRALILPFRLWFDVALLVPLLAPVLSLQHIIFPLRKPYKDNIKVGNVYIVISGSTDGSVTFWDLTDSVEAFMQSVSVCDVEKLFDCQKRPRTGRGSQGGRRWRRSLSSGLSKERQGNNQVTSKAKNKAESINSTTHGTSSVPNKSEDNNMVCSQTRHTASPVLETKADDSSAEICEIQPLHLLKNVHQSGVNCLHVSEIKAGQTNDSSCVYSIVSGGDDQSIHHLVVELSTKTINIDYGVLTPDVAHLVTEPEYLKDTNFQNHSRNYEIRFLNSEKFPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLHQSKLIERAHLIVSVPEPEALSARACSRNHYQIAVAGRGMQIVDFSGCQHDE