Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28880.t1 | XP_024629125.1 | 98.9 | 715 | 6 | 1 | 1 | 715 | 1 | 713 | 0.00E+00 | 1157.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28880.t1 | Q9M1H3 | 75.8 | 724 | 165 | 3 | 1 | 715 | 1 | 723 | 1.4e-282 | 973.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28880.t1 | G7LB54 | 98.9 | 715 | 6 | 1 | 1 | 715 | 54 | 766 | 0.0e+00 | 1157.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene31234 | MS.gene28880 | PPI |
MS.gene028666 | MS.gene28880 | PPI |
MS.gene28880 | MS.gene044268 | PPI |
MS.gene25771 | MS.gene28880 | PPI |
MS.gene70530 | MS.gene28880 | PPI |
MS.gene28880 | MS.gene050086 | PPI |
MS.gene054719 | MS.gene28880 | PPI |
MS.gene28880 | MS.gene40858 | PPI |
MS.gene28880 | MS.gene98065 | PPI |
MS.gene69745 | MS.gene28880 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28880.t1 | MTR_8g075040 | 99.021 | 715 | 5 | 1 | 1 | 715 | 54 | 766 | 0.0 | 1438 |
MS.gene28880.t1 | MTR_7g018380 | 98.042 | 715 | 14 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1429 |
MS.gene28880.t1 | MTR_1g066620 | 91.444 | 561 | 46 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1055 |
MS.gene28880.t1 | MTR_3g080970 | 39.645 | 676 | 358 | 14 | 41 | 705 | 74 | 710 | 4.63e-155 | 466 |
MS.gene28880.t1 | MTR_2g095440 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 1.10e-148 | 446 |
MS.gene28880.t1 | MTR_2g095440 | 40.942 | 552 | 293 | 6 | 154 | 705 | 4 | 522 | 6.15e-148 | 442 |
MS.gene28880.t1 | MTR_2g095440 | 41.091 | 550 | 291 | 6 | 156 | 705 | 12 | 528 | 7.64e-148 | 442 |
MS.gene28880.t1 | MTR_4g057795 | 41.155 | 554 | 293 | 7 | 152 | 705 | 62 | 582 | 1.22e-145 | 438 |
MS.gene28880.t1 | MTR_4g057795 | 40.873 | 504 | 265 | 7 | 202 | 705 | 2 | 472 | 4.43e-129 | 391 |
MS.gene28880.t1 | MTR_3g095010 | 29.561 | 592 | 366 | 14 | 144 | 715 | 96 | 656 | 2.35e-62 | 221 |
MS.gene28880.t1 | MTR_1g063170 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.43e-13 | 75.1 |
MS.gene28880.t1 | MTR_7g102070 | 30.332 | 211 | 112 | 7 | 482 | 666 | 420 | 621 | 2.39e-13 | 74.3 |
MS.gene28880.t1 | MTR_4g124050 | 31.313 | 198 | 82 | 7 | 493 | 655 | 1055 | 1233 | 2.72e-13 | 74.3 |
MS.gene28880.t1 | MTR_3g107800 | 31.034 | 203 | 86 | 7 | 488 | 655 | 1026 | 1209 | 1.28e-12 | 72.0 |
MS.gene28880.t1 | MTR_6g011680 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 2.09e-12 | 71.2 |
MS.gene28880.t1 | MTR_5g029750 | 28.509 | 228 | 126 | 10 | 488 | 691 | 989 | 1203 | 4.16e-12 | 70.5 |
MS.gene28880.t1 | MTR_8g022270 | 26.786 | 224 | 135 | 7 | 488 | 691 | 598 | 812 | 1.22e-11 | 68.9 |
MS.gene28880.t1 | MTR_3g093430 | 30.213 | 235 | 113 | 9 | 488 | 691 | 364 | 578 | 1.22e-11 | 68.9 |
MS.gene28880.t1 | MTR_8g107410 | 30.144 | 209 | 105 | 6 | 167 | 366 | 34 | 210 | 2.32e-11 | 65.1 |
MS.gene28880.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 2.68e-11 | 65.9 |
MS.gene28880.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 4.30e-11 | 65.5 |
MS.gene28880.t1 | MTR_7g079540 | 26.210 | 248 | 126 | 8 | 166 | 386 | 98 | 315 | 6.05e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28880.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1136 |
MS.gene28880.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1136 |
MS.gene28880.t1 | AT1G64550 | 39.435 | 672 | 346 | 14 | 52 | 705 | 83 | 711 | 3.28e-156 | 469 |
MS.gene28880.t1 | AT5G60790 | 41.802 | 555 | 288 | 8 | 152 | 705 | 67 | 587 | 1.86e-146 | 440 |
MS.gene28880.t1 | AT5G64840 | 28.998 | 569 | 367 | 9 | 145 | 703 | 89 | 630 | 3.50e-65 | 229 |
MS.gene28880.t1 | AT5G09930 | 30.366 | 573 | 356 | 14 | 144 | 703 | 74 | 616 | 3.79e-62 | 220 |
MS.gene28880.t1 | AT1G67940 | 32.558 | 215 | 103 | 9 | 161 | 366 | 37 | 218 | 1.59e-13 | 72.0 |
MS.gene28880.t1 | AT3G28345 | 30.556 | 216 | 124 | 7 | 481 | 673 | 988 | 1200 | 3.92e-13 | 73.9 |
MS.gene28880.t1 | AT2G36910 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.95e-13 | 73.6 |
MS.gene28880.t1 | AT3G28390 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 7.04e-13 | 72.8 |
MS.gene28880.t1 | AT3G28860 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 1.75e-11 | 68.6 |
MS.gene28880.t1 | AT1G70610 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.17e-11 | 67.8 |
MS.gene28880.t1 | AT1G70610 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.39e-11 | 67.4 |
MS.gene28880.t1 | AT1G65410 | 27.723 | 202 | 104 | 5 | 166 | 354 | 97 | 269 | 3.15e-11 | 65.9 |
MS.gene28880.t1 | AT4G25960 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.24e-11 | 67.4 |
MS.gene28880.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 4.81e-11 | 67.0 |
MS.gene28880.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 4.81e-11 | 67.0 |
MS.gene28880.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 4.81e-11 | 67.0 |
MS.gene28880.t1 | AT3G28380 | 28.502 | 207 | 111 | 7 | 488 | 666 | 995 | 1192 | 6.54e-11 | 66.6 |
MS.gene28880.t1 | AT1G10680 | 26.609 | 233 | 128 | 10 | 488 | 690 | 982 | 1201 | 8.94e-11 | 66.2 |
Find 168 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 8.2:-29899608 | MS.gene28880:CDS |
CAGTGTATGCAGAAGCTTTC+GGG | 0.221638 | 8.2:+29901211 | None:intergenic |
GAAGCTTTCGGGGCAGGTTT+TGG | 0.249610 | 8.2:+29901222 | None:intergenic |
ATGAAGAACGGAGTCAAATA+TGG | 0.285206 | 8.2:-29899352 | MS.gene28880:CDS |
GATGCTTTCACTGTTGTAAT+TGG | 0.287671 | 8.2:-29901000 | MS.gene28880:CDS |
AGGCAAAGAAGGAAGCTCTT+AGG | 0.295120 | 8.2:-29901032 | MS.gene28880:CDS |
CTCTGCCATGTTGGCAGGTA+TGG | 0.307869 | 8.2:-29901292 | MS.gene28880:CDS |
TGTTGATGTTGGCATTGATA+TGG | 0.325155 | 8.2:-29899861 | MS.gene28880:CDS |
GGAAAACGTTATGGTTTGAT+TGG | 0.326176 | 8.2:-29900847 | MS.gene28880:CDS |
AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 8.2:-29901265 | MS.gene28880:CDS |
ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 8.2:+29900002 | None:intergenic |
TAAGAATATTGACGTCCTTC+TGG | 0.334816 | 8.2:-29900761 | MS.gene28880:CDS |
AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 8.2:-29901052 | MS.gene28880:CDS |
GCCTAAAATCCTCTCGGTTT+GGG | 0.340199 | 8.2:+29899891 | None:intergenic |
ACCTCAAGTGGCTTCAAATC+TGG | 0.342071 | 8.2:+29901123 | None:intergenic |
TGCATATCCAGATGATTTGT+AGG | 0.356331 | 8.2:+29899470 | None:intergenic |
TTGTAATCCTCAAATGTTCC+AGG | 0.358592 | 8.2:+29899299 | None:intergenic |
ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 8.2:+29900111 | None:intergenic |
GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 8.2:-29899786 | MS.gene28880:CDS |
AGAAGGACGTCAATATTCTT+AGG | 0.383693 | 8.2:+29900763 | None:intergenic |
ATATCTCATGGAAAACGTTA+TGG | 0.390477 | 8.2:-29900856 | MS.gene28880:CDS |
TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 8.2:-29900130 | MS.gene28880:CDS |
AGCCTAAAATCCTCTCGGTT+TGG | 0.396484 | 8.2:+29899890 | None:intergenic |
TCAGTGTATGCAGAAGCTTT+CGG | 0.398636 | 8.2:+29901210 | None:intergenic |
CACTGTTGTAATTGGAAGTC+GGG | 0.401671 | 8.2:-29900992 | MS.gene28880:CDS |
GTTGCCATCGTTGGGCCTAA+TGG | 0.402218 | 8.2:-29899830 | MS.gene28880:CDS |
GGTGTGAGTTCAGTGGGTTC+AGG | 0.404849 | 8.2:+29899950 | None:intergenic |
TCTGTCTCTGCCATGTTGGC+AGG | 0.407416 | 8.2:-29901297 | MS.gene28880:CDS |
GGGACTCGTGTTGCCATCGT+TGG | 0.415761 | 8.2:-29899839 | MS.gene28880:CDS |
CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 8.2:+29899761 | None:intergenic |
TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 8.2:+29899644 | None:intergenic |
TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 8.2:+29901046 | None:intergenic |
TACTAATGAGGAAGAGGATG+TGG | 0.424275 | 8.2:-29900599 | MS.gene28880:CDS |
GGCAAAGAAGGAAGCTCTTA+GGG | 0.426538 | 8.2:-29901031 | MS.gene28880:CDS |
GAAAACGTTATGGTTTGATT+GGG | 0.428668 | 8.2:-29900846 | MS.gene28880:CDS |
GATCTACAAAATATAGCTTC+TGG | 0.431690 | 8.2:-29900646 | MS.gene28880:CDS |
CCTGGTTTAGCCTTTGAAGA+TGG | 0.434308 | 8.2:+29901351 | None:intergenic |
GAGATATTCCCAACACTTTG+TGG | 0.436079 | 8.2:-29899717 | MS.gene28880:CDS |
GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 8.2:-29899739 | MS.gene28880:CDS |
CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 8.2:+29899560 | None:intergenic |
CACTAATCATCTTGACTTGA+GGG | 0.447004 | 8.2:-29900368 | MS.gene28880:CDS |
TATGCAGAAGCTTTCGGGGC+AGG | 0.452904 | 8.2:+29901216 | None:intergenic |
GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 8.2:+29899693 | None:intergenic |
CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 8.2:+29899639 | None:intergenic |
AGATGAACCTACAAATCATC+TGG | 0.461197 | 8.2:-29899477 | MS.gene28880:CDS |
AATATAGCTTCTGGTGAAGA+AGG | 0.461252 | 8.2:-29900637 | MS.gene28880:CDS |
GTTGATGTTGGCATTGATAT+GGG | 0.466393 | 8.2:-29899860 | MS.gene28880:CDS |
AAATTTCCCTGGAACATTTG+AGG | 0.468288 | 8.2:-29899306 | MS.gene28880:CDS |
TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 8.2:-29900832 | MS.gene28880:CDS |
GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 8.2:-29899607 | MS.gene28880:CDS |
GTTGACTTGCCCATTCCATT+CGG | 0.473068 | 8.2:+29900823 | None:intergenic |
CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 8.2:-29900456 | MS.gene28880:CDS |
CTGGTTGAGCAGGAGGTAGT+TGG | 0.476330 | 8.2:-29900742 | MS.gene28880:CDS |
CATCCTCCAGCCGCCACTAA+AGG | 0.476753 | 8.2:+29900450 | None:intergenic |
TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 8.2:+29899709 | None:intergenic |
TGACGTCCTTCTGGTTGAGC+AGG | 0.476988 | 8.2:-29900752 | MS.gene28880:CDS |
AGGCTCTCAGATGTTGATGT+TGG | 0.477753 | 8.2:-29899872 | MS.gene28880:CDS |
TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 8.2:-29899547 | MS.gene28880:CDS |
CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 8.2:-29899338 | MS.gene28880:CDS |
TCACTGTTGTAATTGGAAGT+CGG | 0.487149 | 8.2:-29900993 | MS.gene28880:CDS |
CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 8.2:+29899559 | None:intergenic |
ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 8.2:-29899546 | MS.gene28880:CDS |
GGACTCGTGTTGCCATCGTT+GGG | 0.492382 | 8.2:-29899838 | MS.gene28880:CDS |
TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 8.2:-29899441 | MS.gene28880:CDS |
AGTCGGGCTTCAGTGCTTGA+TGG | 0.496702 | 8.2:-29900976 | MS.gene28880:CDS |
CCTCAAGTCAAGATGATTAG+TGG | 0.497140 | 8.2:+29900369 | None:intergenic |
AGATGATACTAATGAGGAAG+AGG | 0.497593 | 8.2:-29900605 | MS.gene28880:CDS |
TGTGGCTGAACAGGCAAAGA+AGG | 0.499430 | 8.2:-29901043 | MS.gene28880:CDS |
ATCGTTGGGCCTAATGGTGC+TGG | 0.501366 | 8.2:-29899824 | MS.gene28880:CDS |
CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 8.2:-29900463 | MS.gene28880:CDS |
TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 8.2:-29900232 | MS.gene28880:CDS |
TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 8.2:-29899745 | MS.gene28880:CDS |
TAGCAAAGATGTTTCTAAGA+AGG | 0.504069 | 8.2:-29901328 | MS.gene28880:CDS |
CAAAAGCAAGAGCAAGGGTA+AGG | 0.506561 | 8.2:-29900041 | MS.gene28880:CDS |
GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 8.2:-29899617 | MS.gene28880:CDS |
AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 8.2:-29899740 | MS.gene28880:CDS |
CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 8.2:+29901047 | None:intergenic |
TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 8.2:+29899708 | None:intergenic |
TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 8.2:-29900833 | MS.gene28880:CDS |
TCTTGCTTGGAGGAAGATAC+CGG | 0.518263 | 8.2:-29900788 | MS.gene28880:CDS |
TATGAACAATTACAACTGAT+GGG | 0.518809 | 8.2:-29900556 | MS.gene28880:CDS |
GTATGAACAATTACAACTGA+TGG | 0.520659 | 8.2:-29900557 | MS.gene28880:CDS |
GTTCAGTGGGTTCAGGAAAG+TGG | 0.522874 | 8.2:+29899957 | None:intergenic |
CGTCCTTCTGGTTGAGCAGG+AGG | 0.524087 | 8.2:-29900749 | MS.gene28880:CDS |
GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 8.2:-29899428 | MS.gene28880:CDS |
TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 8.2:+29899648 | None:intergenic |
ACTAATGAGGAAGAGGATGT+GGG | 0.528986 | 8.2:-29900598 | MS.gene28880:CDS |
AGCTAAGTTCGCAGCAGCTA+AGG | 0.533009 | 8.2:-29900074 | MS.gene28880:CDS |
AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 8.2:+29899671 | None:intergenic |
TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 8.2:+29901333 | None:intergenic |
AGCTTCTGGTGAAGAAGGCA+TGG | 0.539788 | 8.2:-29900632 | MS.gene28880:CDS |
TGGAACATTTGAGGATTACA+AGG | 0.541220 | 8.2:-29899297 | MS.gene28880:CDS |
TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 8.2:-29899453 | MS.gene28880:CDS |
GGCACTGTTAGAAATTTCCC+TGG | 0.544696 | 8.2:-29899317 | MS.gene28880:CDS |
AGTGGAGGTGTGAGTTCAGT+GGG | 0.547635 | 8.2:+29899944 | None:intergenic |
GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 8.2:-29900107 | MS.gene28880:CDS |
AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 8.2:-29900122 | MS.gene28880:CDS |
TAGCTGCTGCGAACTTAGCT+CGG | 0.550469 | 8.2:+29900077 | None:intergenic |
TGAAGAACGGAGTCAAATAT+GGG | 0.551908 | 8.2:-29899351 | MS.gene28880:CDS |
ACTTCAGTGAAGATATCTCA+TGG | 0.554865 | 8.2:-29900868 | MS.gene28880:CDS |
CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 8.2:-29899653 | MS.gene28880:CDS |
TGAGTCTGAAGAGGAGCAAG+AGG | 0.562122 | 8.2:-29901157 | MS.gene28880:CDS |
TATGGTTTGATTGGGCCGAA+TGG | 0.562765 | 8.2:-29900838 | MS.gene28880:CDS |
GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 8.2:-29899652 | MS.gene28880:CDS |
AATGAAGTTTCAAATCATGC+AGG | 0.564833 | 8.2:+29900242 | None:intergenic |
ACGTCAATATTCTTAGGTAC+CGG | 0.565113 | 8.2:+29900769 | None:intergenic |
TTCATCCATACCTGCCAACA+TGG | 0.566109 | 8.2:+29901287 | None:intergenic |
CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 8.2:-29899702 | MS.gene28880:CDS |
TAGAAGAGTACTTGTGTCGT+TGG | 0.567745 | 8.2:-29900333 | MS.gene28880:CDS |
TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 8.2:-29899657 | MS.gene28880:CDS |
ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 8.2:+29899926 | None:intergenic |
CCACTAATCATCTTGACTTG+AGG | 0.575501 | 8.2:-29900369 | MS.gene28880:CDS |
TTGACTTGAGGGCTGTTCTG+TGG | 0.576261 | 8.2:-29900357 | MS.gene28880:CDS |
GGGGTAAGATGGTTATGACT+AGG | 0.577561 | 8.2:+29899581 | None:intergenic |
GAAAAGCAAAAGCAAGAGCA+AGG | 0.587820 | 8.2:-29900047 | MS.gene28880:CDS |
ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 8.2:-29899794 | MS.gene28880:CDS |
GGATGCAGGTCCATCTTCAA+AGG | 0.590519 | 8.2:-29901361 | MS.gene28880:CDS |
TTCAGACTCATCATCATCAG+AGG | 0.591473 | 8.2:+29901170 | None:intergenic |
TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 8.2:-29901166 | MS.gene28880:CDS |
TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 8.2:-29899997 | MS.gene28880:CDS |
AAGTGGAGGTGTGAGTTCAG+TGG | 0.595199 | 8.2:+29899943 | None:intergenic |
GCCAGATTTGAAGCCACTTG+AGG | 0.595553 | 8.2:-29901124 | MS.gene28880:CDS |
CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 8.2:+29900003 | None:intergenic |
CCATCTTCAAAGGCTAAACC+AGG | 0.598127 | 8.2:-29901351 | MS.gene28880:CDS |
CTCAAGTCAAGATGATTAGT+GGG | 0.599587 | 8.2:+29900370 | None:intergenic |
GGATAAAGATGATACTAATG+AGG | 0.600793 | 8.2:-29900611 | MS.gene28880:CDS |
CTGAGAGCCTAAAATCCTCT+CGG | 0.603865 | 8.2:+29899885 | None:intergenic |
TTGATGTTGGCATTGATATG+GGG | 0.604870 | 8.2:-29899859 | MS.gene28880:CDS |
GTGTCGTTGGAAGAAAACTT+TGG | 0.605012 | 8.2:-29900320 | MS.gene28880:CDS |
CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 8.2:+29899989 | None:intergenic |
AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 8.2:-29900000 | MS.gene28880:CDS |
TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 8.2:+29900394 | None:intergenic |
TCGTTGGAAGAAAACTTTGG+TGG | 0.608839 | 8.2:-29900317 | MS.gene28880:CDS |
TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 8.2:+29899929 | None:intergenic |
GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 8.2:-29899773 | MS.gene28880:CDS |
GAGCAAGGGTAAGGTTGATG+AGG | 0.613167 | 8.2:-29900032 | MS.gene28880:CDS |
AGGAGCAAGAGGAAAAGCAT+AGG | 0.613429 | 8.2:-29901146 | MS.gene28880:CDS |
TCAGACTCATCATCATCAGA+GGG | 0.613503 | 8.2:+29901171 | None:intergenic |
TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 8.2:+29899300 | None:intergenic |
TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 8.2:+29900393 | None:intergenic |
GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 8.2:-29899636 | MS.gene28880:CDS |
CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 8.2:-29899560 | MS.gene28880:CDS |
TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 8.2:+29901111 | None:intergenic |
CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 8.2:+29899561 | None:intergenic |
CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 8.2:+29900746 | None:intergenic |
AATCCTTTAGTGGCGGCTGG+AGG | 0.632477 | 8.2:-29900453 | MS.gene28880:CDS |
TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 8.2:-29900129 | MS.gene28880:CDS |
GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 8.2:+29899660 | None:intergenic |
GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 8.2:-29900101 | MS.gene28880:CDS |
TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 8.2:-29899654 | MS.gene28880:CDS |
TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 8.2:+29899505 | None:intergenic |
TCATCTAACAATAAAATGTG+AGG | 0.647891 | 8.2:+29899494 | None:intergenic |
TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 8.2:+29899562 | None:intergenic |
TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 8.2:-29900014 | MS.gene28880:CDS |
AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 8.2:-29899996 | MS.gene28880:CDS |
GACTCATCATCATCAGAGGG+AGG | 0.655723 | 8.2:+29901174 | None:intergenic |
AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 8.2:-29899543 | MS.gene28880:CDS |
CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 8.2:-29900460 | MS.gene28880:CDS |
AAAAGCAAAAGCAAGAGCAA+GGG | 0.661346 | 8.2:-29900046 | MS.gene28880:CDS |
ATGAACAATTACAACTGATG+GGG | 0.661536 | 8.2:-29900555 | MS.gene28880:CDS |
AGCACCATTAGGCCCAACGA+TGG | 0.661552 | 8.2:+29899826 | None:intergenic |
AGTGTATGCAGAAGCTTTCG+GGG | 0.663149 | 8.2:+29901212 | None:intergenic |
GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 8.2:-29899425 | MS.gene28880:CDS |
CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 8.2:-29899559 | MS.gene28880:CDS |
GTGTCTGTGATGATGAAGAA+CGG | 0.698431 | 8.2:-29899364 | MS.gene28880:CDS |
CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 8.2:-29899984 | MS.gene28880:CDS |
TCAGTGCTTGATGGAGACGA+TGG | 0.702484 | 8.2:-29900967 | MS.gene28880:CDS |
CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 8.2:-29899900 | MS.gene28880:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TATGAACAATTACAACTGAT+GGG | - | chr8.2:29900081-29900100 | MS.gene28880:CDS | 25.0% |
! | TCATCTAACAATAAAATGTG+AGG | + | chr8.2:29901146-29901165 | None:intergenic | 25.0% |
!! | AACGATAGAAAATTTTTCTG+TGG | - | chr8.2:29899717-29899736 | MS.gene28880:CDS | 25.0% |
AAAAGCTGATAAGCCTAAAA+AGG | - | chr8.2:29899372-29899391 | MS.gene28880:CDS | 30.0% | |
AATGAAGTTTCAAATCATGC+AGG | + | chr8.2:29900398-29900417 | None:intergenic | 30.0% | |
ATATCTCATGGAAAACGTTA+TGG | - | chr8.2:29899781-29899800 | MS.gene28880:CDS | 30.0% | |
ATGAACAATTACAACTGATG+GGG | - | chr8.2:29900082-29900101 | MS.gene28880:CDS | 30.0% | |
GAAAACGTTATGGTTTGATT+GGG | - | chr8.2:29899791-29899810 | MS.gene28880:CDS | 30.0% | |
GATCTACAAAATATAGCTTC+TGG | - | chr8.2:29899991-29900010 | MS.gene28880:CDS | 30.0% | |
GGATAAAGATGATACTAATG+AGG | - | chr8.2:29900026-29900045 | MS.gene28880:CDS | 30.0% | |
GTATGAACAATTACAACTGA+TGG | - | chr8.2:29900080-29900099 | MS.gene28880:CDS | 30.0% | |
GTGCAAAACTTGGTAAATAT+GGG | - | chr8.2:29901030-29901049 | MS.gene28880:CDS | 30.0% | |
TTGAAACTTCATTTCTATCG+TGG | - | chr8.2:29900405-29900424 | MS.gene28880:CDS | 30.0% | |
! | TAGCAAAGATGTTTCTAAGA+AGG | - | chr8.2:29899309-29899328 | MS.gene28880:CDS | 30.0% |
! | TTATTCGAAGATGCCTTTTT+AGG | + | chr8.2:29899388-29899407 | None:intergenic | 30.0% |
!! | AATTTTGATGCTTTTGAGAG+TGG | - | chr8.2:29900429-29900448 | MS.gene28880:CDS | 30.0% |
!! | ATTTTGATGCTTTTGAGAGT+GGG | - | chr8.2:29900430-29900449 | MS.gene28880:CDS | 30.0% |
!! | TAAAAAGGCATCTTCGAATA+AGG | - | chr8.2:29899387-29899406 | MS.gene28880:CDS | 30.0% |
!! | TATGCAAAGTATTGATGCAT+TGG | - | chr8.2:29901184-29901203 | MS.gene28880:CDS | 30.0% |
AAAAGCAAAAGCAAGAGCAA+GGG | - | chr8.2:29900591-29900610 | MS.gene28880:CDS | 35.0% | |
AAATTTCCCTGGAACATTTG+AGG | - | chr8.2:29901331-29901350 | MS.gene28880:CDS | 35.0% | |
AATATAGCTTCTGGTGAAGA+AGG | - | chr8.2:29900000-29900019 | MS.gene28880:CDS | 35.0% | |
ACGTCAATATTCTTAGGTAC+CGG | + | chr8.2:29899871-29899890 | None:intergenic | 35.0% | |
ACTTCAGTGAAGATATCTCA+TGG | - | chr8.2:29899769-29899788 | MS.gene28880:CDS | 35.0% | |
AGAAGGACGTCAATATTCTT+AGG | + | chr8.2:29899877-29899896 | None:intergenic | 35.0% | |
AGATGAACCTACAAATCATC+TGG | - | chr8.2:29901160-29901179 | MS.gene28880:CDS | 35.0% | |
AGATGATACTAATGAGGAAG+AGG | - | chr8.2:29900032-29900051 | MS.gene28880:CDS | 35.0% | |
ATGAAGAACGGAGTCAAATA+TGG | - | chr8.2:29901285-29901304 | MS.gene28880:CDS | 35.0% | |
CGTGCAAAACTTGGTAAATA+TGG | - | chr8.2:29901029-29901048 | MS.gene28880:CDS | 35.0% | |
CTCAAGTCAAGATGATTAGT+GGG | + | chr8.2:29900270-29900289 | None:intergenic | 35.0% | |
GATGCTTTCACTGTTGTAAT+TGG | - | chr8.2:29899637-29899656 | MS.gene28880:CDS | 35.0% | |
GGAAAACGTTATGGTTTGAT+TGG | - | chr8.2:29899790-29899809 | MS.gene28880:CDS | 35.0% | |
GTGTTTCATCCATTGTTAGT+AGG | + | chr8.2:29900947-29900966 | None:intergenic | 35.0% | |
TAAAATGTGAGGTCTTGACA+TGG | + | chr8.2:29901135-29901154 | None:intergenic | 35.0% | |
TAAGAATATTGACGTCCTTC+TGG | - | chr8.2:29899876-29899895 | MS.gene28880:CDS | 35.0% | |
TCACTGTTGTAATTGGAAGT+CGG | - | chr8.2:29899644-29899663 | MS.gene28880:CDS | 35.0% | |
TCATCGAGCAATAATAGAGT+GGG | + | chr8.2:29900246-29900265 | None:intergenic | 35.0% | |
TGAAGAACGGAGTCAAATAT+GGG | - | chr8.2:29901286-29901305 | MS.gene28880:CDS | 35.0% | |
TGGAACATTTGAGGATTACA+AGG | - | chr8.2:29901340-29901359 | MS.gene28880:CDS | 35.0% | |
TGTAATCCTCAAATGTTCCA+GGG | + | chr8.2:29901340-29901359 | None:intergenic | 35.0% | |
TTAGAAACATCTTTGCTACC+TGG | + | chr8.2:29899307-29899326 | None:intergenic | 35.0% | |
TTCATCGAGCAATAATAGAG+TGG | + | chr8.2:29900247-29900266 | None:intergenic | 35.0% | |
TTGTAATCCTCAAATGTTCC+AGG | + | chr8.2:29901341-29901360 | None:intergenic | 35.0% | |
! | AAAATTTTTCTGTGGCTGCT+CGG | - | chr8.2:29899725-29899744 | MS.gene28880:CDS | 35.0% |
! | CAAATATGGGTTGTTGAAGA+TGG | - | chr8.2:29901299-29901318 | MS.gene28880:CDS | 35.0% |
! | CACTAAAGGATTTTGTAGGA+CGG | + | chr8.2:29900176-29900195 | None:intergenic | 35.0% |
! | CACTAATCATCTTGACTTGA+GGG | - | chr8.2:29900269-29900288 | MS.gene28880:CDS | 35.0% |
! | TGCATATCCAGATGATTTGT+AGG | + | chr8.2:29901170-29901189 | None:intergenic | 35.0% |
!! | GTTGATGTTGGCATTGATAT+GGG | - | chr8.2:29900777-29900796 | MS.gene28880:CDS | 35.0% |
!! | TGTTGATGTTGGCATTGATA+TGG | - | chr8.2:29900776-29900795 | MS.gene28880:CDS | 35.0% |
!! | TTGATGTTGGCATTGATATG+GGG | - | chr8.2:29900778-29900797 | MS.gene28880:CDS | 35.0% |
!!! | TCAAAGATTTTAGCTGGTCT+GGG | - | chr8.2:29900129-29900148 | MS.gene28880:CDS | 35.0% |
AAGAAAAAGTCAGAGGATGC+AGG | - | chr8.2:29899262-29899281 | MS.gene28880:CDS | 40.0% | |
ACTAATGAGGAAGAGGATGT+GGG | - | chr8.2:29900039-29900058 | MS.gene28880:CDS | 40.0% | |
ACTTCAATAAGCTGCAGAAG+TGG | + | chr8.2:29900714-29900733 | None:intergenic | 40.0% | |
AGAAGTCAGAAGTTGAGGAT+AGG | - | chr8.2:29900897-29900916 | MS.gene28880:CDS | 40.0% | |
CACTGTTGTAATTGGAAGTC+GGG | - | chr8.2:29899645-29899664 | MS.gene28880:CDS | 40.0% | |
CCATTGTCAAACTATCAGGA+GGG | - | chr8.2:29901078-29901097 | MS.gene28880:CDS | 40.0% | |
CCTACAAAATCCTTTAGTGG+CGG | - | chr8.2:29900177-29900196 | MS.gene28880:CDS | 40.0% | |
CCTCAAGTCAAGATGATTAG+TGG | + | chr8.2:29900271-29900290 | None:intergenic | 40.0% | |
CCTCCTGATAGTTTGACAAT+GGG | + | chr8.2:29901080-29901099 | None:intergenic | 40.0% | |
CGTCCTACAAAATCCTTTAG+TGG | - | chr8.2:29900174-29900193 | MS.gene28880:CDS | 40.0% | |
CTCCTGATAGTTTGACAATG+GGG | + | chr8.2:29901079-29901098 | None:intergenic | 40.0% | |
CTTTGTGGACCTACTAACAA+TGG | - | chr8.2:29900935-29900954 | MS.gene28880:CDS | 40.0% | |
GAAAAGCAAAAGCAAGAGCA+AGG | - | chr8.2:29900590-29900609 | MS.gene28880:CDS | 40.0% | |
GAACAAGGCTCAACAAGATA+AGG | - | chr8.2:29900530-29900549 | MS.gene28880:CDS | 40.0% | |
GAAGTCAGAAGTTGAGGATA+GGG | - | chr8.2:29900898-29900917 | MS.gene28880:CDS | 40.0% | |
GAGATATTCCCAACACTTTG+TGG | - | chr8.2:29900920-29900939 | MS.gene28880:CDS | 40.0% | |
TACTAATGAGGAAGAGGATG+TGG | - | chr8.2:29900038-29900057 | MS.gene28880:CDS | 40.0% | |
TCAGACTCATCATCATCAGA+GGG | + | chr8.2:29899469-29899488 | None:intergenic | 40.0% | |
TCAGTGTATGCAGAAGCTTT+CGG | + | chr8.2:29899430-29899449 | None:intergenic | 40.0% | |
TCCTGATAGTTTGACAATGG+GGG | + | chr8.2:29901078-29901097 | None:intergenic | 40.0% | |
TCGTTGGAAGAAAACTTTGG+TGG | - | chr8.2:29900320-29900339 | MS.gene28880:CDS | 40.0% | |
TTAGTAGGTCCACAAAGTGT+TGG | + | chr8.2:29900932-29900951 | None:intergenic | 40.0% | |
TTCAGACTCATCATCATCAG+AGG | + | chr8.2:29899470-29899489 | None:intergenic | 40.0% | |
TTCGAAGAAGTCAGAAGTTG+AGG | - | chr8.2:29900892-29900911 | MS.gene28880:CDS | 40.0% | |
TTGAAAGCAGCTAGAAGAAC+CGG | - | chr8.2:29900507-29900526 | MS.gene28880:CDS | 40.0% | |
! | AAATTTTTCTGTGGCTGCTC+GGG | - | chr8.2:29899726-29899745 | MS.gene28880:CDS | 40.0% |
! | ATTTTCTGTCTCTGCCATGT+TGG | - | chr8.2:29899336-29899355 | MS.gene28880:CDS | 40.0% |
! | CCACTAATCATCTTGACTTG+AGG | - | chr8.2:29900268-29900287 | MS.gene28880:CDS | 40.0% |
! | GAATCTTCTAGCTGGTGATT+TGG | - | chr8.2:29900851-29900870 | MS.gene28880:CDS | 40.0% |
! | GGTTTTACAAAGGACATGCA+GGG | - | chr8.2:29900150-29900169 | MS.gene28880:CDS | 40.0% |
! | GTAGATTTTCCAGCACCATT+AGG | + | chr8.2:29900825-29900844 | None:intergenic | 40.0% |
! | GTGTCGTTGGAAGAAAACTT+TGG | - | chr8.2:29900317-29900336 | MS.gene28880:CDS | 40.0% |
! | GTGTCTGTGATGATGAAGAA+CGG | - | chr8.2:29901273-29901292 | MS.gene28880:CDS | 40.0% |
! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr8.2:29900931-29900950 | None:intergenic | 40.0% |
! | TGATGATGATGAGTCTGAAG+AGG | - | chr8.2:29899471-29899490 | MS.gene28880:CDS | 40.0% |
!! | CAAGCGTCAAAGATTTTAGC+TGG | - | chr8.2:29900123-29900142 | MS.gene28880:CDS | 40.0% |
!! | TAGAAGAGTACTTGTGTCGT+TGG | - | chr8.2:29900304-29900323 | MS.gene28880:CDS | 40.0% |
!!! | AGATATTTTAGCTGCCCATG+TGG | - | chr8.2:29899576-29899595 | MS.gene28880:CDS | 40.0% |
!!! | CACTTTTGAAGCTTCTTGCT+TGG | - | chr8.2:29899836-29899855 | MS.gene28880:CDS | 40.0% |
!!! | GTCAAAGATTTTAGCTGGTC+TGG | - | chr8.2:29900128-29900147 | MS.gene28880:CDS | 40.0% |
!!! | TTTTGAAGCTTCTTGCTTGG+AGG | - | chr8.2:29899839-29899858 | MS.gene28880:CDS | 40.0% |
ACACTGCTGAATCTTCTAGC+TGG | - | chr8.2:29900843-29900862 | MS.gene28880:CDS | 45.0% | |
ACCCCCATTGTCAAACTATC+AGG | - | chr8.2:29901074-29901093 | MS.gene28880:CDS | 45.0% | |
ACCTCAAGTGGCTTCAAATC+TGG | + | chr8.2:29899517-29899536 | None:intergenic | 45.0% | |
ACTTGTGTGGTACCTCTACT+TGG | + | chr8.2:29900638-29900657 | None:intergenic | 45.0% | |
AGCCTAAAATCCTCTCGGTT+TGG | + | chr8.2:29900750-29900769 | None:intergenic | 45.0% | |
AGGCAAAGAAGGAAGCTCTT+AGG | - | chr8.2:29899605-29899624 | MS.gene28880:CDS | 45.0% | |
AGGCTCTCAGATGTTGATGT+TGG | - | chr8.2:29900765-29900784 | MS.gene28880:CDS | 45.0% | |
AGTGTATGCAGAAGCTTTCG+GGG | + | chr8.2:29899428-29899447 | None:intergenic | 45.0% | |
CAAAAGCAAGAGCAAGGGTA+AGG | - | chr8.2:29900596-29900615 | MS.gene28880:CDS | 45.0% | |
CAGTGTATGCAGAAGCTTTC+GGG | + | chr8.2:29899429-29899448 | None:intergenic | 45.0% | |
CCATCTTCAAAGGCTAAACC+AGG | - | chr8.2:29899286-29899305 | MS.gene28880:CDS | 45.0% | |
CCCATTGTCAAACTATCAGG+AGG | - | chr8.2:29901077-29901096 | MS.gene28880:CDS | 45.0% | |
CCCTCCTGATAGTTTGACAA+TGG | + | chr8.2:29901081-29901100 | None:intergenic | 45.0% | |
CTGAGAGCCTAAAATCCTCT+CGG | + | chr8.2:29900755-29900774 | None:intergenic | 45.0% | |
CTTCGAACTTCACCTTCACT+TGG | + | chr8.2:29900879-29900898 | None:intergenic | 45.0% | |
CTTGTGTGGTACCTCTACTT+GGG | + | chr8.2:29900637-29900656 | None:intergenic | 45.0% | |
GCCTAAAATCCTCTCGGTTT+GGG | + | chr8.2:29900749-29900768 | None:intergenic | 45.0% | |
GGCAAAGAAGGAAGCTCTTA+GGG | - | chr8.2:29899606-29899625 | MS.gene28880:CDS | 45.0% | |
GGCACTGTTAGAAATTTCCC+TGG | - | chr8.2:29901320-29901339 | MS.gene28880:CDS | 45.0% | |
GGCTCAACAAGATAAGGTGA+AGG | - | chr8.2:29900536-29900555 | MS.gene28880:CDS | 45.0% | |
GGGGTAAGATGGTTATGACT+AGG | + | chr8.2:29901059-29901078 | None:intergenic | 45.0% | |
GTTTGACAATGGGGGTAAGA+TGG | + | chr8.2:29901070-29901089 | None:intergenic | 45.0% | |
TATGGTTTGATTGGGCCGAA+TGG | - | chr8.2:29899799-29899818 | MS.gene28880:CDS | 45.0% | |
TCAATAAGCTGCAGAAGTGG+AGG | + | chr8.2:29900711-29900730 | None:intergenic | 45.0% | |
TCAGCAATAGACACCTCAAG+TGG | + | chr8.2:29899529-29899548 | None:intergenic | 45.0% | |
TCTTGCTTGGAGGAAGATAC+CGG | - | chr8.2:29899849-29899868 | MS.gene28880:CDS | 45.0% | |
TGAAAGCAGCTAGAAGAACC+GGG | - | chr8.2:29900508-29900527 | MS.gene28880:CDS | 45.0% | |
TTCATCCATACCTGCCAACA+TGG | + | chr8.2:29899353-29899372 | None:intergenic | 45.0% | |
TTGATTGGGCCGAATGGAAT+GGG | - | chr8.2:29899805-29899824 | MS.gene28880:CDS | 45.0% | |
TTTGATTGGGCCGAATGGAA+TGG | - | chr8.2:29899804-29899823 | MS.gene28880:CDS | 45.0% | |
! | AATTTTTCTGTGGCTGCTCG+GGG | - | chr8.2:29899727-29899746 | MS.gene28880:CDS | 45.0% |
! | ACCCAAACCGAGAGGATTTT+AGG | - | chr8.2:29900745-29900764 | MS.gene28880:CDS | 45.0% |
! | AGGAGCAAGAGGAAAAGCAT+AGG | - | chr8.2:29899491-29899510 | MS.gene28880:CDS | 45.0% |
! | CCGCCACTAAAGGATTTTGT+AGG | + | chr8.2:29900180-29900199 | None:intergenic | 45.0% |
! | CCTGGTTTAGCCTTTGAAGA+TGG | + | chr8.2:29899289-29899308 | None:intergenic | 45.0% |
! | GGGTTTTACAAAGGACATGC+AGG | - | chr8.2:29900149-29900168 | MS.gene28880:CDS | 45.0% |
!! | AAGTAGAGGTACCACACAAG+TGG | - | chr8.2:29900637-29900656 | MS.gene28880:CDS | 45.0% |
!! | AGACGAAGAAGGTACTGAAC+AGG | + | chr8.2:29900969-29900988 | None:intergenic | 45.0% |
!! | AGCTGGTCTGGGTTTTACAA+AGG | - | chr8.2:29900140-29900159 | MS.gene28880:CDS | 45.0% |
!! | ATCTTGTTGAGCCTTGTTCC+CGG | + | chr8.2:29900529-29900548 | None:intergenic | 45.0% |
!! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr8.2:29900864-29900883 | MS.gene28880:CDS | 45.0% |
!! | GTTGACTTGCCCATTCCATT+CGG | + | chr8.2:29899817-29899836 | None:intergenic | 45.0% |
AGCTAAGTTCGCAGCAGCTA+AGG | - | chr8.2:29900563-29900582 | MS.gene28880:CDS | 50.0% | |
AGCTAGAAGAACCGGGAACA+AGG | - | chr8.2:29900515-29900534 | MS.gene28880:CDS | 50.0% | |
AGCTTCTGGTGAAGAAGGCA+TGG | - | chr8.2:29900005-29900024 | MS.gene28880:CDS | 50.0% | |
CAAAATCCTTTAGTGGCGGC+TGG | - | chr8.2:29900181-29900200 | MS.gene28880:CDS | 50.0% | |
CTTCAGTTACCCAAACCGAG+AGG | - | chr8.2:29900737-29900756 | MS.gene28880:CDS | 50.0% | |
CTTTGCCTGTTCAGCCACAT+GGG | + | chr8.2:29899593-29899612 | None:intergenic | 50.0% | |
GACTCATCATCATCAGAGGG+AGG | + | chr8.2:29899466-29899485 | None:intergenic | 50.0% | |
GAGGCTGTTCGTGCAAAACT+TGG | - | chr8.2:29901020-29901039 | MS.gene28880:CDS | 50.0% | |
GATGCGCTGGATGAATTCAC+TGG | - | chr8.2:29901209-29901228 | MS.gene28880:CDS | 50.0% | |
GGATGCAGGTCCATCTTCAA+AGG | - | chr8.2:29899276-29899295 | MS.gene28880:CDS | 50.0% | |
TAGCTGCTGCGAACTTAGCT+CGG | + | chr8.2:29900563-29900582 | None:intergenic | 50.0% | |
TATCAGGAGGGCAGAAAGCT+CGG | - | chr8.2:29901090-29901109 | MS.gene28880:CDS | 50.0% | |
TCAGTGCTTGATGGAGACGA+TGG | - | chr8.2:29899670-29899689 | MS.gene28880:CDS | 50.0% | |
TCTTTGCCTGTTCAGCCACA+TGG | + | chr8.2:29899594-29899613 | None:intergenic | 50.0% | |
TGAGGATGAGACCCAAGTAG+AGG | - | chr8.2:29900623-29900642 | MS.gene28880:CDS | 50.0% | |
TGAGTCTGAAGAGGAGCAAG+AGG | - | chr8.2:29899480-29899499 | MS.gene28880:CDS | 50.0% | |
TGTGGCTGAACAGGCAAAGA+AGG | - | chr8.2:29899594-29899613 | MS.gene28880:CDS | 50.0% | |
! | AAGTGGAGGTGTGAGTTCAG+TGG | + | chr8.2:29900697-29900716 | None:intergenic | 50.0% |
! | AGTGGAGGTGTGAGTTCAGT+GGG | + | chr8.2:29900696-29900715 | None:intergenic | 50.0% |
! | GCCAGATTTGAAGCCACTTG+AGG | - | chr8.2:29899513-29899532 | MS.gene28880:CDS | 50.0% |
! | GTTCAGTGGGTTCAGGAAAG+TGG | + | chr8.2:29900683-29900702 | None:intergenic | 50.0% |
! | TTGACTTGAGGGCTGTTCTG+TGG | - | chr8.2:29900280-29900299 | MS.gene28880:CDS | 50.0% |
!! | AGAGGTACCACACAAGTGGA+GGG | - | chr8.2:29900641-29900660 | MS.gene28880:CDS | 50.0% |
!! | GAGCAAGGGTAAGGTTGATG+AGG | - | chr8.2:29900605-29900624 | MS.gene28880:CDS | 50.0% |
!! | TAGAGGTACCACACAAGTGG+AGG | - | chr8.2:29900640-29900659 | MS.gene28880:CDS | 50.0% |
AATCCTTTAGTGGCGGCTGG+AGG | - | chr8.2:29900184-29900203 | MS.gene28880:CDS | 55.0% | |
AGCACCATTAGGCCCAACGA+TGG | + | chr8.2:29900814-29900833 | None:intergenic | 55.0% | |
AGTCGGGCTTCAGTGCTTGA+TGG | - | chr8.2:29899661-29899680 | MS.gene28880:CDS | 55.0% | |
ATCAGGAGGGCAGAAAGCTC+GGG | - | chr8.2:29901091-29901110 | MS.gene28880:CDS | 55.0% | |
ATCGTTGGGCCTAATGGTGC+TGG | - | chr8.2:29900813-29900832 | MS.gene28880:CDS | 55.0% | |
CTACCTCCTGCTCAACCAGA+AGG | + | chr8.2:29899894-29899913 | None:intergenic | 55.0% | |
CTCTGCCATGTTGGCAGGTA+TGG | - | chr8.2:29899345-29899364 | MS.gene28880:CDS | 55.0% | |
CTGGTTGAGCAGGAGGTAGT+TGG | - | chr8.2:29899895-29899914 | MS.gene28880:CDS | 55.0% | |
CTGTAGTCCCTCCACTTGTG+TGG | + | chr8.2:29900651-29900670 | None:intergenic | 55.0% | |
CTTGCTTACTAAGCCCCTCC+TGG | + | chr8.2:29901001-29901020 | None:intergenic | 55.0% | |
GCGCTGGATGAATTCACTGG+TGG | - | chr8.2:29901212-29901231 | MS.gene28880:CDS | 55.0% | |
GGACTCGTGTTGCCATCGTT+GGG | - | chr8.2:29900799-29900818 | MS.gene28880:CDS | 55.0% | |
GGAGGGGCTTAGTAAGCAAG+AGG | - | chr8.2:29901001-29901020 | MS.gene28880:CDS | 55.0% | |
GGTCTGGATGGAGACGAAGA+AGG | + | chr8.2:29900980-29900999 | None:intergenic | 55.0% | |
GTTGCCATCGTTGGGCCTAA+TGG | - | chr8.2:29900807-29900826 | MS.gene28880:CDS | 55.0% | |
TATGCAGAAGCTTTCGGGGC+AGG | + | chr8.2:29899424-29899443 | None:intergenic | 55.0% | |
TCTGTCTCTGCCATGTTGGC+AGG | - | chr8.2:29899340-29899359 | MS.gene28880:CDS | 55.0% | |
TCTTCGTCTCCATCCAGACC+AGG | - | chr8.2:29900980-29900999 | MS.gene28880:CDS | 55.0% | |
TTACTAAGCCCCTCCTGGTC+TGG | + | chr8.2:29900996-29901015 | None:intergenic | 55.0% | |
! | GAAGCTTTCGGGGCAGGTTT+TGG | + | chr8.2:29899418-29899437 | None:intergenic | 55.0% |
! | GGTGTGAGTTCAGTGGGTTC+AGG | + | chr8.2:29900690-29900709 | None:intergenic | 55.0% |
! | TGACGTCCTTCTGGTTGAGC+AGG | - | chr8.2:29899885-29899904 | MS.gene28880:CDS | 55.0% |
!! | TGATGCATTGGCTGATGCGC+TGG | - | chr8.2:29901196-29901215 | MS.gene28880:CDS | 55.0% |
AGCTGCCCATGTGGCTGAAC+AGG | - | chr8.2:29899585-29899604 | MS.gene28880:CDS | 60.0% | |
CAAGTGGAGGGACTACAGCG+TGG | - | chr8.2:29900653-29900672 | MS.gene28880:CDS | 60.0% | |
CATCCTCCAGCCGCCACTAA+AGG | + | chr8.2:29900190-29900209 | None:intergenic | 60.0% | |
CGTCTCCATCCAGACCAGGA+GGG | - | chr8.2:29900984-29901003 | MS.gene28880:CDS | 60.0% | |
GGGACTCGTGTTGCCATCGT+TGG | - | chr8.2:29900798-29900817 | MS.gene28880:CDS | 60.0% | |
GTCTCCATCCAGACCAGGAG+GGG | - | chr8.2:29900985-29901004 | MS.gene28880:CDS | 60.0% | |
TAAGCCCCTCCTGGTCTGGA+TGG | + | chr8.2:29900992-29901011 | None:intergenic | 60.0% | |
TCGTCTCCATCCAGACCAGG+AGG | - | chr8.2:29900983-29901002 | MS.gene28880:CDS | 60.0% | |
! | CGTCCTTCTGGTTGAGCAGG+AGG | - | chr8.2:29899888-29899907 | MS.gene28880:CDS | 60.0% |
AGGAGGGCAGAAAGCTCGGG+TGG | - | chr8.2:29901094-29901113 | MS.gene28880:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 29899256 | 29901403 | 29899256 | ID=MS.gene28880 |
chr8.2 | mRNA | 29899256 | 29901403 | 29899256 | ID=MS.gene28880.t1;Parent=MS.gene28880 |
chr8.2 | exon | 29899256 | 29901403 | 29899256 | ID=MS.gene28880.t1.exon1;Parent=MS.gene28880.t1 |
chr8.2 | CDS | 29899256 | 29901403 | 29899256 | ID=cds.MS.gene28880.t1;Parent=MS.gene28880.t1 |
Gene Sequence |
Protein sequence |