Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29080.t1 | XP_013460975.1 | 89.9 | 396 | 24 | 1 | 1 | 396 | 1 | 380 | 3.40E-173 | 617.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29080.t1 | Q5ZJ01 | 47.1 | 263 | 126 | 6 | 8 | 259 | 22 | 282 | 1.0e-61 | 238.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29080.t1 | B7FM37 | 89.9 | 396 | 24 | 1 | 1 | 396 | 1 | 380 | 2.4e-173 | 617.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052632 | MS.gene29080 | 0.888668 | 4.81E-73 | -1.69E-46 |
| MS.gene061134 | MS.gene29080 | 0.846142 | 2.62E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29080 | MS.gene80865 | PPI |
| MS.gene29080 | MS.gene62602 | PPI |
| MS.gene041293 | MS.gene29080 | PPI |
| MS.gene29080 | MS.gene040250 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29080.t1 | MTR_3g075410 | 94.697 | 396 | 5 | 1 | 1 | 396 | 1 | 380 | 0.0 | 771 |
| MS.gene29080.t1 | MTR_7g032640 | 73.165 | 395 | 80 | 4 | 1 | 395 | 1 | 369 | 0.0 | 576 |
| MS.gene29080.t1 | MTR_7g017430 | 61.735 | 392 | 126 | 4 | 1 | 391 | 1 | 369 | 3.78e-168 | 476 |
| MS.gene29080.t1 | MTR_6g018930 | 58.378 | 370 | 122 | 5 | 1 | 355 | 1 | 353 | 2.93e-145 | 417 |
| MS.gene29080.t1 | MTR_8g037335 | 55.911 | 313 | 128 | 4 | 1 | 306 | 1 | 310 | 1.76e-116 | 343 |
| MS.gene29080.t1 | MTR_5g029210 | 57.966 | 295 | 117 | 3 | 1 | 288 | 1 | 295 | 2.46e-115 | 342 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29080.t1 | AT4G24760 | 69.347 | 398 | 86 | 6 | 1 | 396 | 1 | 364 | 0.0 | 556 |
| MS.gene29080.t1 | AT5G14390 | 67.327 | 404 | 87 | 7 | 1 | 395 | 1 | 368 | 0.0 | 533 |
| MS.gene29080.t1 | AT3G01690 | 65.823 | 395 | 100 | 4 | 1 | 395 | 1 | 360 | 0.0 | 522 |
| MS.gene29080.t1 | AT3G30380 | 59.950 | 397 | 122 | 8 | 1 | 391 | 1 | 366 | 2.61e-160 | 456 |
| MS.gene29080.t1 | AT3G30380 | 61.358 | 383 | 112 | 7 | 1 | 377 | 1 | 353 | 7.15e-160 | 455 |
| MS.gene29080.t1 | AT5G38220 | 60.429 | 326 | 123 | 3 | 1 | 326 | 1 | 320 | 3.16e-143 | 410 |
| MS.gene29080.t1 | AT5G38220 | 60.429 | 326 | 123 | 3 | 1 | 326 | 1 | 320 | 3.16e-143 | 410 |
| MS.gene29080.t1 | AT1G13610 | 61.329 | 331 | 109 | 8 | 1 | 321 | 1 | 322 | 4.76e-134 | 388 |
| MS.gene29080.t1 | AT1G66900 | 66.914 | 269 | 88 | 1 | 1 | 268 | 1 | 269 | 5.49e-134 | 385 |
| MS.gene29080.t1 | AT4G31020 | 60.976 | 287 | 107 | 1 | 1 | 282 | 1 | 287 | 1.67e-128 | 372 |
| MS.gene29080.t1 | AT4G31020 | 60.976 | 287 | 107 | 1 | 1 | 282 | 1 | 287 | 1.67e-128 | 372 |
| MS.gene29080.t1 | AT2G24320 | 58.537 | 287 | 113 | 2 | 1 | 282 | 1 | 286 | 1.11e-124 | 362 |
| MS.gene29080.t1 | AT2G24320 | 58.214 | 280 | 111 | 2 | 8 | 282 | 1 | 279 | 8.31e-121 | 352 |
| MS.gene29080.t1 | AT1G32190 | 53.922 | 306 | 129 | 4 | 1 | 295 | 1 | 305 | 4.54e-110 | 329 |
| MS.gene29080.t1 | AT5G38220 | 69.712 | 208 | 61 | 1 | 1 | 208 | 1 | 206 | 7.25e-105 | 309 |
| MS.gene29080.t1 | AT1G13610 | 61.033 | 213 | 69 | 5 | 115 | 321 | 18 | 222 | 3.82e-78 | 242 |
| MS.gene29080.t1 | AT1G32190 | 57.297 | 185 | 76 | 3 | 114 | 296 | 38 | 221 | 6.91e-66 | 213 |
Find 85 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGAAATACGAGCCTTTA+TGG | 0.179223 | 3.4:-73832796 | MS.gene29080:CDS |
| TTCTTCTAAAACTCAGTCTT+TGG | 0.197920 | 3.4:+73832681 | None:intergenic |
| GCTCCCATGGAAAGCATTTA+TGG | 0.211941 | 3.4:-73832829 | MS.gene29080:CDS |
| CTGAGATGTCTAAGGTATTC+TGG | 0.212636 | 3.4:+73832737 | None:intergenic |
| TCTGTCTTATCAGTACTTCT+TGG | 0.247819 | 3.4:+73832527 | None:intergenic |
| CAGGAAGATATAATCCTTTA+TGG | 0.268151 | 3.4:-73833800 | MS.gene29080:CDS |
| CTGAACATCGACACTTCTTC+TGG | 0.268960 | 3.4:+73832364 | None:intergenic |
| AGATGGAAATCACTGTAATT+TGG | 0.273725 | 3.4:-73832768 | MS.gene29080:CDS |
| CACTTCTTCTGGATTTCTCT+TGG | 0.303385 | 3.4:+73832375 | None:intergenic |
| ACCGCTCCGTCTGGTCAAAT+TGG | 0.322966 | 3.4:+73832444 | None:intergenic |
| CTGTGATCTGTGCTCTTCCT+TGG | 0.329846 | 3.4:+73832560 | None:intergenic |
| CTGTGATCTGTGCTCTTCCT+TGG | 0.342686 | 3.4:+73832608 | None:intergenic |
| CACCTGCGTGTTAATCTCAT+TGG | 0.350000 | 3.4:-73835854 | MS.gene29080:CDS |
| ATACTGGTTTGACATCTATA+AGG | 0.350777 | 3.4:-73833657 | MS.gene29080:intron |
| CTCCATAGTCCTATACTATC+GGG | 0.395584 | 3.4:-73833710 | MS.gene29080:CDS |
| CTTAACTTCTCTAATTTCTC+AGG | 0.396675 | 3.4:+73832470 | None:intergenic |
| TTTCCATCTTTGAGCCATAA+AGG | 0.404459 | 3.4:+73832782 | None:intergenic |
| CTCCCATGGAAAGCATTTAT+GGG | 0.407681 | 3.4:-73832828 | MS.gene29080:CDS |
| CGAACAATCAGTACTTCCTC+TGG | 0.409662 | 3.4:+73832637 | None:intergenic |
| AGTTTGTATGATGGTGGGTT+TGG | 0.414231 | 3.4:+73836085 | None:intergenic |
| ATCCTTTATGGTCAATCTGT+TGG | 0.416151 | 3.4:-73833788 | MS.gene29080:CDS |
| TCCTTTATGGTCAATCTGTT+GGG | 0.417819 | 3.4:-73833787 | MS.gene29080:CDS |
| ATCTCAATTCCACGTCGATT+AGG | 0.419995 | 3.4:+73835986 | None:intergenic |
| TCTTCTAAAACTCAGTCTTT+GGG | 0.420393 | 3.4:+73832682 | None:intergenic |
| CTCATCAAAGAAGAAGTAAC+AGG | 0.422757 | 3.4:-73836064 | MS.gene29080:CDS |
| TGTTGGGAGTGGTCCTACTT+TGG | 0.422954 | 3.4:-73833771 | MS.gene29080:CDS |
| TCTGGCTACGGACAGTCGTC+AGG | 0.439666 | 3.4:-73833988 | MS.gene29080:CDS |
| TTCTTCTTGACCGCTCCGTC+TGG | 0.442109 | 3.4:+73832435 | None:intergenic |
| CAGAGGAAGTACTGATTGTT+CGG | 0.447084 | 3.4:-73832636 | MS.gene29080:CDS |
| ACCCCGATAGTATAGGACTA+TGG | 0.448961 | 3.4:+73833708 | None:intergenic |
| TTGTATGATGGTGGGTTTGG+TGG | 0.455998 | 3.4:+73836088 | None:intergenic |
| ACCTGCGTGTTAATCTCATT+GGG | 0.456981 | 3.4:-73835853 | MS.gene29080:intron |
| TCTCCATAGTCCTATACTAT+CGG | 0.466854 | 3.4:-73833711 | MS.gene29080:CDS |
| GTCTTATCAGTACTTCTTGG+TGG | 0.469855 | 3.4:+73832530 | None:intergenic |
| AAGTGTCTTGAAGAGAACTA+TGG | 0.478313 | 3.4:-73833830 | MS.gene29080:CDS |
| GCGGAGGAGCATCGACTGGC+TGG | 0.480856 | 3.4:-73832330 | MS.gene29080:CDS |
| TCCCAACAGATTGACCATAA+AGG | 0.485033 | 3.4:+73833786 | None:intergenic |
| TTGATGAGTTTGTATGATGG+TGG | 0.487412 | 3.4:+73836079 | None:intergenic |
| ACCCCGTGAAAAGGACATAC+TGG | 0.492094 | 3.4:-73833673 | MS.gene29080:CDS |
| AGAGAACTATGGTGCTAAGC+AGG | 0.495083 | 3.4:-73833819 | MS.gene29080:CDS |
| ACAACTGTGCTGTACTCTCA+TGG | 0.498182 | 3.4:-73835929 | MS.gene29080:CDS |
| GAGAACAACAGCCCTCAGTC+GGG | 0.509984 | 3.4:+73833730 | None:intergenic |
| TCTTTGATGAGTTTGTATGA+TGG | 0.510323 | 3.4:+73836076 | None:intergenic |
| CATGGAAATGCTGCTGACAT+TGG | 0.511990 | 3.4:-73835911 | MS.gene29080:CDS |
| ACTCTCAACCCCGATAGTAT+AGG | 0.512348 | 3.4:+73833701 | None:intergenic |
| CTTACATGAATTACTAGCAC+TGG | 0.512410 | 3.4:+73833516 | None:intergenic |
| GAGGTTGTTGATTGCTCCCA+TGG | 0.513066 | 3.4:-73832842 | MS.gene29080:CDS |
| GAACATTGATAAAATTCCAT+TGG | 0.515486 | 3.4:-73833547 | MS.gene29080:CDS |
| TATGGTCAATCTGTTGGGAG+TGG | 0.517208 | 3.4:-73833782 | MS.gene29080:CDS |
| TGATGAGTTTGTATGATGGT+GGG | 0.520698 | 3.4:+73836080 | None:intergenic |
| GAGCCTTTATGGCTCAAAGA+TGG | 0.522856 | 3.4:-73832785 | MS.gene29080:CDS |
| GAGTGATGTACCCCGTGAAA+AGG | 0.530450 | 3.4:-73833682 | MS.gene29080:CDS |
| TCTTCAGGGAACTGCTGATG+AGG | 0.536410 | 3.4:-73832861 | MS.gene29080:intron |
| GGGAGGAGTGACGTCATCAA+TGG | 0.544062 | 3.4:-73836131 | MS.gene29080:CDS |
| GACCGCGGAGGAGCATCGAC+TGG | 0.544219 | 3.4:-73832334 | MS.gene29080:CDS |
| GCTCCCATAAATGCTTTCCA+TGG | 0.545857 | 3.4:+73832825 | None:intergenic |
| CAGAGGAAGTACTGATTGCT+CGG | 0.546473 | 3.4:-73832588 | MS.gene29080:CDS |
| GCATGCAGATACGATTACTC+TGG | 0.564063 | 3.4:-73834006 | MS.gene29080:intron |
| GGAGAACAACAGCCCTCAGT+CGG | 0.578144 | 3.4:+73833729 | None:intergenic |
| CTCCCATAAATGCTTTCCAT+GGG | 0.578838 | 3.4:+73832826 | None:intergenic |
| TGCTCGATTACCCCGACTGA+GGG | 0.581528 | 3.4:-73833741 | MS.gene29080:CDS |
| CTAAAACTCAGTCTTTGGGA+TGG | 0.593010 | 3.4:+73832686 | None:intergenic |
| AGCACTGGACACTTCACCAA+TGG | 0.598967 | 3.4:+73833531 | None:intergenic |
| TCCAATTTGACCAGACGGAG+CGG | 0.605274 | 3.4:-73832445 | MS.gene29080:CDS |
| AAGAGTCCAATTTGACCAGA+CGG | 0.606214 | 3.4:-73832450 | MS.gene29080:CDS |
| GCATACGTATTATGCTCACT+TGG | 0.606829 | 3.4:+73833872 | None:intergenic |
| CTGGCTACGGACAGTCGTCA+GGG | 0.608648 | 3.4:-73833987 | MS.gene29080:CDS |
| CTGATTGCTCGGAAAAGCCA+AGG | 0.613588 | 3.4:-73832577 | MS.gene29080:CDS |
| CTGATTGTTCGGAAAAGCCA+AGG | 0.613774 | 3.4:-73832625 | MS.gene29080:CDS |
| CGAGCAGCAAGATCCAAAGT+AGG | 0.615910 | 3.4:+73833758 | None:intergenic |
| TATGTATGTTCGTCATCCAA+TGG | 0.620144 | 3.4:-73835957 | MS.gene29080:CDS |
| TTGAAATTTCCTAATCGACG+TGG | 0.629349 | 3.4:-73835995 | MS.gene29080:CDS |
| CTACGGACAGTCGTCAGGGA+AGG | 0.630140 | 3.4:-73833983 | MS.gene29080:intron |
| CTGCTCGATTACCCCGACTG+AGG | 0.632658 | 3.4:-73833742 | MS.gene29080:CDS |
| TCTCAGAAAATTCATATCGA+CGG | 0.640818 | 3.4:-73832720 | MS.gene29080:CDS |
| TCCATAGTCCTATACTATCG+GGG | 0.640930 | 3.4:-73833709 | MS.gene29080:CDS |
| AGATACGATTACTCTGGCTA+CGG | 0.649102 | 3.4:-73834000 | MS.gene29080:CDS |
| ACCCAATGAGATTAACACGC+AGG | 0.669815 | 3.4:+73835852 | None:intergenic |
| AGCCAGTCGATGCTCCTCCG+CGG | 0.675261 | 3.4:+73832332 | None:intergenic |
| AGAAGTGCGTAAGCAATGGG+AGG | 0.678812 | 3.4:-73836148 | None:intergenic |
| AGAACAACAGCCCTCAGTCG+GGG | 0.685237 | 3.4:+73833731 | None:intergenic |
| GATAGGGTTAAACAATCCAG+AGG | 0.687055 | 3.4:-73832653 | MS.gene29080:CDS |
| ATGTTCAGTTTGAGAGACCG+CGG | 0.693193 | 3.4:-73832349 | MS.gene29080:CDS |
| TTCAGTTTGAGAGACCGCGG+AGG | 0.696369 | 3.4:-73832346 | MS.gene29080:CDS |
| AGGAAGAGCACAGATCACAG+AGG | 0.761146 | 3.4:-73832605 | MS.gene29080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATTAAAAAAGAAAAA+TGG | - | chr3.4:73835315-73835334 | MS.gene29080:intron | 10.0% |
| !!! | TTTCTTTTTTAATATTACTT+CGG | + | chr3.4:73835313-73835332 | None:intergenic | 10.0% |
| !! | AAAAATAAGACTCAAATTAA+AGG | + | chr3.4:73833908-73833927 | None:intergenic | 15.0% |
| !! | ACAATTAACAATTTCTATAA+TGG | - | chr3.4:73835036-73835055 | MS.gene29080:intron | 15.0% |
| !! | GTTGAAAATTGAAAAAAATA+CGG | + | chr3.4:73832617-73832636 | None:intergenic | 15.0% |
| !!! | CTCTAGTTTTTTTTTTTTTT+GGG | - | chr3.4:73835510-73835529 | MS.gene29080:intron | 15.0% |
| !!! | CTTTTATCAACAAAAAAAAA+AGG | + | chr3.4:73835290-73835309 | None:intergenic | 15.0% |
| !!! | GACTTTTCTTTATTAAATTA+AGG | + | chr3.4:73834268-73834287 | None:intergenic | 15.0% |
| !!! | GTTTGTTATAAAAAACTATA+TGG | - | chr3.4:73834377-73834396 | MS.gene29080:intron | 15.0% |
| !!! | TAGGTTAATTTTTTTTTGTT+TGG | - | chr3.4:73832827-73832846 | MS.gene29080:CDS | 15.0% |
| !!! | TCTCTAGTTTTTTTTTTTTT+TGG | - | chr3.4:73835509-73835528 | MS.gene29080:intron | 15.0% |
| !! | AAAAATGAGAACAAAAGAAA+AGG | + | chr3.4:73833356-73833375 | None:intergenic | 20.0% |
| !! | AAAATGGAAACAAAGAAAAT+TGG | - | chr3.4:73835331-73835350 | MS.gene29080:intron | 20.0% |
| !! | AAAGCAAGGAATTAAATAAA+AGG | + | chr3.4:73833713-73833732 | None:intergenic | 20.0% |
| !! | AAATGGAAACAAAGAAAATT+GGG | - | chr3.4:73835332-73835351 | MS.gene29080:intron | 20.0% |
| !! | AAGCAAGGAATTAAATAAAA+GGG | + | chr3.4:73833712-73833731 | None:intergenic | 20.0% |
| !! | AATTAAATAAAAGGGTTTGA+TGG | + | chr3.4:73833704-73833723 | None:intergenic | 20.0% |
| !! | AGATGACAAGAATATAATTT+AGG | + | chr3.4:73835458-73835477 | None:intergenic | 20.0% |
| !! | ATGCAAAAAATAGTATATTG+AGG | - | chr3.4:73834000-73834019 | MS.gene29080:CDS | 20.0% |
| !! | GCTAGGAATAATATTTAAAT+TGG | - | chr3.4:73833635-73833654 | MS.gene29080:intron | 20.0% |
| !! | GGAATAATATTTAAATTGGT+TGG | - | chr3.4:73833639-73833658 | MS.gene29080:intron | 20.0% |
| !! | TTCATATTGCTTTACTAATT+TGG | - | chr3.4:73835543-73835562 | MS.gene29080:intron | 20.0% |
| !!! | AAAGAAACTGTTTTTTTGAA+AGG | - | chr3.4:73833956-73833975 | MS.gene29080:intron | 20.0% |
| !!! | AACAATTTCTATAATGGTTT+TGG | - | chr3.4:73835042-73835061 | MS.gene29080:intron | 20.0% |
| !!! | AGTGTAATTGAAGTATTATA+CGG | + | chr3.4:73834215-73834234 | None:intergenic | 20.0% |
| !!! | ATCATTCTTATATTTTCTTC+AGG | - | chr3.4:73835567-73835586 | MS.gene29080:intron | 20.0% |
| !!! | CTCATTTTTAGATTTTAGAT+AGG | - | chr3.4:73833367-73833386 | MS.gene29080:intron | 20.0% |
| !!! | GAGTAAATTTTTCAGATAAT+TGG | + | chr3.4:73833192-73833211 | None:intergenic | 20.0% |
| !!! | TCATTAGTTTATGATATGAA+GGG | - | chr3.4:73832942-73832961 | MS.gene29080:intron | 20.0% |
| !!! | TCATTCTTATATTTTCTTCA+GGG | - | chr3.4:73835568-73835587 | MS.gene29080:intron | 20.0% |
| !!! | TGATTTTAAATAACAATGTG+CGG | + | chr3.4:73835142-73835161 | None:intergenic | 20.0% |
| !!! | TGATTTTGATGTGATTTTTA+GGG | - | chr3.4:73832853-73832872 | MS.gene29080:CDS | 20.0% |
| !!! | TTGATTTTGATGTGATTTTT+AGG | - | chr3.4:73832852-73832871 | MS.gene29080:CDS | 20.0% |
| ! | AAAATCGAACAAAATAAGCA+TGG | + | chr3.4:73834957-73834976 | None:intergenic | 25.0% |
| ! | AAATTTACTGTAGGGATTTA+AGG | - | chr3.4:73833264-73833283 | MS.gene29080:intron | 25.0% |
| ! | AATGGAAACAAAGAAAATTG+GGG | - | chr3.4:73835333-73835352 | MS.gene29080:intron | 25.0% |
| ! | AATTTACTGTAGGGATTTAA+GGG | - | chr3.4:73833265-73833284 | MS.gene29080:intron | 25.0% |
| ! | ACAAAGATCAGCAAATATTA+AGG | + | chr3.4:73833612-73833631 | None:intergenic | 25.0% |
| ! | ACATTAAAACACGAAAACAA+TGG | + | chr3.4:73833059-73833078 | None:intergenic | 25.0% |
| ! | ACATTAAAATACGAAAACGA+TGG | + | chr3.4:73833145-73833164 | None:intergenic | 25.0% |
| ! | ACTAAGTATTACTAACACTT+TGG | - | chr3.4:73833823-73833842 | MS.gene29080:CDS | 25.0% |
| ! | AGATCTAACAAATTTACTGT+AGG | - | chr3.4:73833255-73833274 | MS.gene29080:intron | 25.0% |
| ! | ATTAGTAGAAATGTAGAATG+TGG | - | chr3.4:73833088-73833107 | MS.gene29080:intron | 25.0% |
| ! | CATCTTGTGAATATGTAATT+TGG | - | chr3.4:73835473-73835492 | MS.gene29080:intron | 25.0% |
| ! | CTGTAACTGAATTATCAAAT+GGG | - | chr3.4:73832682-73832701 | MS.gene29080:CDS | 25.0% |
| ! | CTTCATATCATAAACTAATG+AGG | + | chr3.4:73832943-73832962 | None:intergenic | 25.0% |
| ! | CTTTAAACAAGTAAATTACC+AGG | + | chr3.4:73832789-73832808 | None:intergenic | 25.0% |
| ! | GAACATTGATAAAATTCCAT+TGG | - | chr3.4:73834896-73834915 | MS.gene29080:intron | 25.0% |
| ! | GACAAGAATATAATTTAGGT+TGG | + | chr3.4:73835454-73835473 | None:intergenic | 25.0% |
| ! | GATCTAACAAATTTACTGTA+GGG | - | chr3.4:73833256-73833275 | MS.gene29080:intron | 25.0% |
| ! | TATGGTGACAAAATATTAGA+TGG | + | chr3.4:73834983-73835002 | None:intergenic | 25.0% |
| ! | TCATCTGTTATTGAGTTATT+GGG | + | chr3.4:73833782-73833801 | None:intergenic | 25.0% |
| ! | TCTGTAACTGAATTATCAAA+TGG | - | chr3.4:73832681-73832700 | MS.gene29080:CDS | 25.0% |
| ! | TTCATCTGTTATTGAGTTAT+TGG | + | chr3.4:73833783-73833802 | None:intergenic | 25.0% |
| !! | AAACAAGAAAGAAGCATATA+AGG | + | chr3.4:73834492-73834511 | None:intergenic | 25.0% |
| !! | AAGAGAAGCATAATGAAAAA+CGG | - | chr3.4:73834535-73834554 | MS.gene29080:intron | 25.0% |
| !! | CTCATTAGTTTATGATATGA+AGG | - | chr3.4:73832941-73832960 | MS.gene29080:intron | 25.0% |
| !! | GTTAGAAGATAAGGATTTTA+AGG | - | chr3.4:73833012-73833031 | MS.gene29080:intron | 25.0% |
| !! | TAAGGCTAAAACTTAAGTTT+TGG | + | chr3.4:73833594-73833613 | None:intergenic | 25.0% |
| !! | TAATTTTTGTGGTTCTTATG+TGG | - | chr3.4:73832990-73833009 | MS.gene29080:intron | 25.0% |
| !!! | AAACTGTTTTTTTGAAAGGA+TGG | - | chr3.4:73833960-73833979 | MS.gene29080:intron | 25.0% |
| !!! | ACCTTTTAGAATCAATCTAA+GGG | - | chr3.4:73834082-73834101 | MS.gene29080:intron | 25.0% |
| !!! | TTTTTGTTTCTTGTTTCACT+GGG | + | chr3.4:73835381-73835400 | None:intergenic | 25.0% |
| AAATGTAGAATGTGGTGATT+GGG | - | chr3.4:73833096-73833115 | MS.gene29080:intron | 30.0% | |
| ACTGTAAAAGACCATAAAGT+TGG | - | chr3.4:73833459-73833478 | MS.gene29080:intron | 30.0% | |
| AGAAACAAAAAGCTAGAGAA+AGG | - | chr3.4:73835390-73835409 | MS.gene29080:intron | 30.0% | |
| AGATGGAAATCACTGTAATT+TGG | - | chr3.4:73835675-73835694 | MS.gene29080:intron | 30.0% | |
| AGTGCATTTACTACATGATA+TGG | - | chr3.4:73833433-73833452 | MS.gene29080:intron | 30.0% | |
| AGTTTGGATTAATCTTTGGT+TGG | + | chr3.4:73835417-73835436 | None:intergenic | 30.0% | |
| ATATGTGAACTCTGCATATT+TGG | + | chr3.4:73833875-73833894 | None:intergenic | 30.0% | |
| ATGGAAACAAAGAAAATTGG+GGG | - | chr3.4:73835334-73835353 | MS.gene29080:intron | 30.0% | |
| CACTTGTTTAGTTGTTAGTT+AGG | - | chr3.4:73832885-73832904 | MS.gene29080:intron | 30.0% | |
| CAGGAAGATATAATCCTTTA+TGG | - | chr3.4:73834643-73834662 | MS.gene29080:intron | 30.0% | |
| CCATCTAATTACCAACTTTA+TGG | + | chr3.4:73833473-73833492 | None:intergenic | 30.0% | |
| CTTAACTTCTCTAATTTCTC+AGG | + | chr3.4:73835976-73835995 | None:intergenic | 30.0% | |
| TATTTGATGTCCTTTGCTTT+CGG | - | chr3.4:73834831-73834850 | MS.gene29080:intron | 30.0% | |
| TCTCAGAAAATTCATATCGA+CGG | - | chr3.4:73835723-73835742 | MS.gene29080:intron | 30.0% | |
| TCTTATGTGGTTAGAAGATA+AGG | - | chr3.4:73833003-73833022 | MS.gene29080:intron | 30.0% | |
| TCTTTGATGAGTTTGTATGA+TGG | + | chr3.4:73832370-73832389 | None:intergenic | 30.0% | |
| TTTGGATTCTTGATATACCA+AGG | - | chr3.4:73833841-73833860 | MS.gene29080:CDS | 30.0% | |
| ! | ACCCTTAGATTGATTCTAAA+AGG | + | chr3.4:73834086-73834105 | None:intergenic | 30.0% |
| ! | AGGTTTGATTTAGTCAAAGA+TGG | - | chr3.4:73832905-73832924 | MS.gene29080:intron | 30.0% |
| ! | AGTCAAAGATGGGAAATTTT+TGG | - | chr3.4:73832916-73832935 | MS.gene29080:intron | 30.0% |
| ! | ATAAGCTAGTTTACACAAGT+AGG | - | chr3.4:73835207-73835226 | MS.gene29080:intron | 30.0% |
| ! | CGTTAGTTTGGATTAATCTT+TGG | + | chr3.4:73835421-73835440 | None:intergenic | 30.0% |
| ! | GGTTTGATTTAGTCAAAGAT+GGG | - | chr3.4:73832906-73832925 | MS.gene29080:intron | 30.0% |
| ! | TAGATTGATTCTAAAAGGTG+AGG | + | chr3.4:73834081-73834100 | None:intergenic | 30.0% |
| ! | TCAAAACTTCAACGTTTTCA+CGG | + | chr3.4:73832432-73832451 | None:intergenic | 30.0% |
| !! | AGAAGATAAGGATTTTAAGG+TGG | - | chr3.4:73833015-73833034 | MS.gene29080:intron | 30.0% |
| !! | ATACTGGTTTGACATCTATA+AGG | - | chr3.4:73834786-73834805 | MS.gene29080:intron | 30.0% |
| !! | CCATAAAGTTGGTAATTAGA+TGG | - | chr3.4:73833470-73833489 | MS.gene29080:intron | 30.0% |
| !! | CTATTTTAAAGGGGTCTTTA+GGG | + | chr3.4:73834325-73834344 | None:intergenic | 30.0% |
| !! | CTTTTTGTTTCTTGTTTCAC+TGG | + | chr3.4:73835382-73835401 | None:intergenic | 30.0% |
| !! | TCTTCTAAAACTCAGTCTTT+GGG | + | chr3.4:73835764-73835783 | None:intergenic | 30.0% |
| !! | TCTTGAATGTTACTTTCATG+TGG | - | chr3.4:73833931-73833950 | MS.gene29080:intron | 30.0% |
| !! | TTCTTCTAAAACTCAGTCTT+TGG | + | chr3.4:73835765-73835784 | None:intergenic | 30.0% |
| !! | TTTTAGAAGAAGTGTGGATA+GGG | - | chr3.4:73835774-73835793 | MS.gene29080:intron | 30.0% |
| !!! | CACCTTTTAGAATCAATCTA+AGG | - | chr3.4:73834081-73834100 | MS.gene29080:intron | 30.0% |
| !!! | TGAATTTTCTGAGATGTCTA+AGG | + | chr3.4:73835717-73835736 | None:intergenic | 30.0% |
| AACAGAAATACGAGCCTTTA+TGG | - | chr3.4:73835647-73835666 | MS.gene29080:intron | 35.0% | |
| AAGAAAATTGGGGGAACAAA+TGG | - | chr3.4:73835343-73835362 | MS.gene29080:intron | 35.0% | |
| AAGTGTCTTGAAGAGAACTA+TGG | - | chr3.4:73834613-73834632 | MS.gene29080:intron | 35.0% | |
| AGTATATTGAGGCACAGATA+AGG | - | chr3.4:73834011-73834030 | MS.gene29080:intron | 35.0% | |
| AGTTTACACAAGTAGGAAGT+AGG | - | chr3.4:73835214-73835233 | MS.gene29080:intron | 35.0% | |
| ATACAAGATTCCGAAAGCAA+AGG | + | chr3.4:73834844-73834863 | None:intergenic | 35.0% | |
| ATCCTTTATGGTCAATCTGT+TGG | - | chr3.4:73834655-73834674 | MS.gene29080:intron | 35.0% | |
| ATTGAGTTATTGGGCATCTA+AGG | + | chr3.4:73833773-73833792 | None:intergenic | 35.0% | |
| CAGTATGAACACTAAACTAG+CGG | + | chr3.4:73835092-73835111 | None:intergenic | 35.0% | |
| CTCATCAAAGAAGAAGTAAC+AGG | - | chr3.4:73832379-73832398 | MS.gene29080:CDS | 35.0% | |
| CTTACATGAATTACTAGCAC+TGG | + | chr3.4:73834930-73834949 | None:intergenic | 35.0% | |
| GAAATGTAGAATGTGGTGAT+TGG | - | chr3.4:73833095-73833114 | MS.gene29080:intron | 35.0% | |
| GAAGCTTGATTGTAGTGATT+AGG | - | chr3.4:73832808-73832827 | MS.gene29080:CDS | 35.0% | |
| GACAGCAACAACATAAACTA+TGG | + | chr3.4:73835001-73835020 | None:intergenic | 35.0% | |
| GAGCGGTTACATTCAATTTA+GGG | - | chr3.4:73833735-73833754 | MS.gene29080:CDS | 35.0% | |
| GCAAAGGACATCAAATACAT+AGG | + | chr3.4:73834828-73834847 | None:intergenic | 35.0% | |
| GGGATTTAAGGGATATGAAA+TGG | - | chr3.4:73833276-73833295 | MS.gene29080:intron | 35.0% | |
| GGTGACAAAATATTAGATGG+TGG | + | chr3.4:73834980-73834999 | None:intergenic | 35.0% | |
| GTATATTGAGGCACAGATAA+GGG | - | chr3.4:73834012-73834031 | MS.gene29080:intron | 35.0% | |
| TATGTATGTTCGTCATCCAA+TGG | - | chr3.4:73832486-73832505 | MS.gene29080:CDS | 35.0% | |
| TCCTTTATGGTCAATCTGTT+GGG | - | chr3.4:73834656-73834675 | MS.gene29080:intron | 35.0% | |
| TCTCCATAGTCCTATACTAT+CGG | - | chr3.4:73834732-73834751 | MS.gene29080:intron | 35.0% | |
| TCTGTCTTATCAGTACTTCT+TGG | + | chr3.4:73835919-73835938 | None:intergenic | 35.0% | |
| TGAGCGGTTACATTCAATTT+AGG | - | chr3.4:73833734-73833753 | MS.gene29080:CDS | 35.0% | |
| TGATGAGTTTGTATGATGGT+GGG | + | chr3.4:73832366-73832385 | None:intergenic | 35.0% | |
| TTAATTCCTTGCTTTGTGAG+CGG | - | chr3.4:73833718-73833737 | MS.gene29080:CDS | 35.0% | |
| TTCACAAGTAGGAGTAATGT+TGG | - | chr3.4:73834037-73834056 | MS.gene29080:intron | 35.0% | |
| TTGAAATTTCCTAATCGACG+TGG | - | chr3.4:73832448-73832467 | MS.gene29080:CDS | 35.0% | |
| TTGATGAGTTTGTATGATGG+TGG | + | chr3.4:73832367-73832386 | None:intergenic | 35.0% | |
| TTTCCATCTTTGAGCCATAA+AGG | + | chr3.4:73835664-73835683 | None:intergenic | 35.0% | |
| ! | AAACCAGTATGTCCTTTTCA+CGG | + | chr3.4:73834776-73834795 | None:intergenic | 35.0% |
| ! | AATCAATCTAAGGGTATGCT+TGG | - | chr3.4:73834091-73834110 | MS.gene29080:intron | 35.0% |
| ! | ATCAATCTAAGGGTATGCTT+GGG | - | chr3.4:73834092-73834111 | MS.gene29080:intron | 35.0% |
| ! | TCAGATGTATGAGCTTTTTG+TGG | - | chr3.4:73832555-73832574 | MS.gene29080:CDS | 35.0% |
| ! | TTTAGGGTATGTTTGGATGA+GGG | + | chr3.4:73834309-73834328 | None:intergenic | 35.0% |
| ! | TTTCTTGTTTCACTGGGTAT+AGG | + | chr3.4:73835375-73835394 | None:intergenic | 35.0% |
| !! | AAAGACCCCTTTAAAATAGC+TGG | - | chr3.4:73834326-73834345 | MS.gene29080:intron | 35.0% |
| !! | AAGCAAGCCAGCTATTTTAA+AGG | + | chr3.4:73834336-73834355 | None:intergenic | 35.0% |
| !! | AGCAAGCCAGCTATTTTAAA+GGG | + | chr3.4:73834335-73834354 | None:intergenic | 35.0% |
| !! | CGTTCTATACTTATTTCTGC+AGG | + | chr3.4:73835173-73835192 | None:intergenic | 35.0% |
| !! | GCTATTTTAAAGGGGTCTTT+AGG | + | chr3.4:73834326-73834345 | None:intergenic | 35.0% |
| !! | TAATGTGCTGATTGTGATGT+TGG | - | chr3.4:73833159-73833178 | MS.gene29080:intron | 35.0% |
| !!! | AATGGTTTTGGTCCTTAACT+TGG | - | chr3.4:73835054-73835073 | MS.gene29080:intron | 35.0% |
| !!! | ACTGAGTTTTAGAAGAAGTG+TGG | - | chr3.4:73835768-73835787 | MS.gene29080:intron | 35.0% |
| !!! | GTTTTAGAAGAAGTGTGGAT+AGG | - | chr3.4:73835773-73835792 | MS.gene29080:intron | 35.0% |
| AAGAGTCCAATTTGACCAGA+CGG | - | chr3.4:73835993-73836012 | MS.gene29080:CDS | 40.0% | |
| AAGTAGGTACCTATTGAGTG+TGG | - | chr3.4:73835230-73835249 | MS.gene29080:intron | 40.0% | |
| AATTTCAGTGCCACACATCA+TGG | - | chr3.4:73833328-73833347 | MS.gene29080:intron | 40.0% | |
| ACCTGCGTGTTAATCTCATT+GGG | - | chr3.4:73832590-73832609 | MS.gene29080:CDS | 40.0% | |
| ACTGAGTAAGCACCAAGTTA+AGG | + | chr3.4:73835069-73835088 | None:intergenic | 40.0% | |
| AGATAAGGGAGTTCACAAGT+AGG | - | chr3.4:73834026-73834045 | MS.gene29080:intron | 40.0% | |
| AGATACGATTACTCTGGCTA+CGG | - | chr3.4:73834443-73834462 | MS.gene29080:intron | 40.0% | |
| ATGTGGTGATTGGGAGATAT+TGG | - | chr3.4:73833105-73833124 | MS.gene29080:intron | 40.0% | |
| ATTTACCTGCAGGAATTGGA+AGG | - | chr3.4:73833301-73833320 | MS.gene29080:intron | 40.0% | |
| CACTTCTTCTGGATTTCTCT+TGG | + | chr3.4:73836071-73836090 | None:intergenic | 40.0% | |
| CATATTTGGATGTGCATCCT+TGG | + | chr3.4:73833861-73833880 | None:intergenic | 40.0% | |
| CTCCATAGTCCTATACTATC+GGG | - | chr3.4:73834733-73834752 | MS.gene29080:intron | 40.0% | |
| CTCCCATAAATGCTTTCCAT+GGG | + | chr3.4:73835620-73835639 | None:intergenic | 40.0% | |
| GATAGGGTTAAACAATCCAG+AGG | - | chr3.4:73835790-73835809 | MS.gene29080:intron | 40.0% | |
| GCATACGTATTATGCTCACT+TGG | + | chr3.4:73834574-73834593 | None:intergenic | 40.0% | |
| GTCTTATCAGTACTTCTTGG+TGG | + | chr3.4:73835916-73835935 | None:intergenic | 40.0% | |
| GTGACATTAGTTGAGCTCAA+TGG | - | chr3.4:73833517-73833536 | MS.gene29080:intron | 40.0% | |
| TAAAACCAGCCACACTCAAT+AGG | + | chr3.4:73835242-73835261 | None:intergenic | 40.0% | |
| TAACTTAGTGGGATAAGGCT+TGG | - | chr3.4:73833223-73833242 | MS.gene29080:intron | 40.0% | |
| TAGCAATCCCCTAACTTAGT+GGG | - | chr3.4:73833212-73833231 | MS.gene29080:intron | 40.0% | |
| TCCATAGTCCTATACTATCG+GGG | - | chr3.4:73834734-73834753 | MS.gene29080:intron | 40.0% | |
| TCCCAACAGATTGACCATAA+AGG | + | chr3.4:73834660-73834679 | None:intergenic | 40.0% | |
| TTCCAATTCCTGCAGGTAAA+TGG | + | chr3.4:73833302-73833321 | None:intergenic | 40.0% | |
| TTGTTGCTGTCAGCATGTAA+TGG | - | chr3.4:73835010-73835029 | MS.gene29080:intron | 40.0% | |
| ! | AACCAGTATGTCCTTTTCAC+GGG | + | chr3.4:73834775-73834794 | None:intergenic | 40.0% |
| ! | AAGCCTTATCCCACTAAGTT+AGG | + | chr3.4:73833224-73833243 | None:intergenic | 40.0% |
| ! | AGCCTTATCCCACTAAGTTA+GGG | + | chr3.4:73833223-73833242 | None:intergenic | 40.0% |
| ! | ATCTCAATTCCACGTCGATT+AGG | + | chr3.4:73832460-73832479 | None:intergenic | 40.0% |
| ! | CTAAAACTCAGTCTTTGGGA+TGG | + | chr3.4:73835760-73835779 | None:intergenic | 40.0% |
| ! | CTGAGATGTCTAAGGTATTC+TGG | + | chr3.4:73835709-73835728 | None:intergenic | 40.0% |
| ! | GTATGTTTGGATGAGGGTTT+TGG | + | chr3.4:73834303-73834322 | None:intergenic | 40.0% |
| ! | TATGCTTGGGAGTTGAGTTT+TGG | - | chr3.4:73834105-73834124 | MS.gene29080:intron | 40.0% |
| !! | AGTTTGTATGATGGTGGGTT+TGG | + | chr3.4:73832361-73832380 | None:intergenic | 40.0% |
| !! | CAGAGGAAGTACTGATTGTT+CGG | - | chr3.4:73835807-73835826 | MS.gene29080:intron | 40.0% |
| !! | CTCCCATGGAAAGCATTTAT+GGG | - | chr3.4:73835615-73835634 | MS.gene29080:intron | 40.0% |
| !! | CTTTAGGGTATGTTTGGATG+AGG | + | chr3.4:73834310-73834329 | None:intergenic | 40.0% |
| !! | GCAAGCCAGCTATTTTAAAG+GGG | + | chr3.4:73834334-73834353 | None:intergenic | 40.0% |
| !! | GGCACTTTTTAGCGTTAGTT+TGG | + | chr3.4:73835433-73835452 | None:intergenic | 40.0% |
| !!! | TTGGGAGTTGAGTTTTGGAT+GGG | - | chr3.4:73834110-73834129 | MS.gene29080:intron | 40.0% |
| ACAACTGTGCTGTACTCTCA+TGG | - | chr3.4:73832514-73832533 | MS.gene29080:CDS | 45.0% | |
| ACCCAATGAGATTAACACGC+AGG | + | chr3.4:73832594-73832613 | None:intergenic | 45.0% | |
| ACCCCGATAGTATAGGACTA+TGG | + | chr3.4:73834738-73834757 | None:intergenic | 45.0% | |
| ACTCTCAACCCCGATAGTAT+AGG | + | chr3.4:73834745-73834764 | None:intergenic | 45.0% | |
| AGAAAAGGAGCCATGATGTG+TGG | + | chr3.4:73833341-73833360 | None:intergenic | 45.0% | |
| AGGTGAGGATCTAACGAGTA+CGG | + | chr3.4:73834066-73834085 | None:intergenic | 45.0% | |
| ATGTAACCGCTCACAAAGCA+AGG | + | chr3.4:73833727-73833746 | None:intergenic | 45.0% | |
| ATGTTCAGTTTGAGAGACCG+CGG | - | chr3.4:73836094-73836113 | MS.gene29080:CDS | 45.0% | |
| CACCTGCGTGTTAATCTCAT+TGG | - | chr3.4:73832589-73832608 | MS.gene29080:CDS | 45.0% | |
| CATGGAAATGCTGCTGACAT+TGG | - | chr3.4:73832532-73832551 | MS.gene29080:CDS | 45.0% | |
| CGAACAATCAGTACTTCCTC+TGG | + | chr3.4:73835809-73835828 | None:intergenic | 45.0% | |
| CTAGCAATCCCCTAACTTAG+TGG | - | chr3.4:73833211-73833230 | MS.gene29080:intron | 45.0% | |
| CTGAACATCGACACTTCTTC+TGG | + | chr3.4:73836082-73836101 | None:intergenic | 45.0% | |
| CTGATTGTTCGGAAAAGCCA+AGG | - | chr3.4:73835818-73835837 | MS.gene29080:intron | 45.0% | |
| GAGCCTTTATGGCTCAAAGA+TGG | - | chr3.4:73835658-73835677 | MS.gene29080:intron | 45.0% | |
| GCATGCAGATACGATTACTC+TGG | - | chr3.4:73834437-73834456 | MS.gene29080:intron | 45.0% | |
| GCCTTATCCCACTAAGTTAG+GGG | + | chr3.4:73833222-73833241 | None:intergenic | 45.0% | |
| GCTCCCATAAATGCTTTCCA+TGG | + | chr3.4:73835621-73835640 | None:intergenic | 45.0% | |
| TATGGTCAATCTGTTGGGAG+TGG | - | chr3.4:73834661-73834680 | MS.gene29080:intron | 45.0% | |
| TCCCCTAACTTAGTGGGATA+AGG | - | chr3.4:73833218-73833237 | MS.gene29080:intron | 45.0% | |
| TGAAACCTTCCAATTCCTGC+AGG | + | chr3.4:73833309-73833328 | None:intergenic | 45.0% | |
| TGAAATGGCCATTTACCTGC+AGG | - | chr3.4:73833291-73833310 | MS.gene29080:intron | 45.0% | |
| ! | ACCAGTATGTCCTTTTCACG+GGG | + | chr3.4:73834774-73834793 | None:intergenic | 45.0% |
| ! | ACTTCAACGTTTTCACGGTG+TGG | + | chr3.4:73832427-73832446 | None:intergenic | 45.0% |
| ! | AGAGAACTATGGTGCTAAGC+AGG | - | chr3.4:73834624-73834643 | MS.gene29080:intron | 45.0% |
| ! | CAGGAAGTGCATATGGTTCA+TGG | - | chr3.4:73833556-73833575 | MS.gene29080:intron | 45.0% |
| ! | CTTCAACGTTTTCACGGTGT+GGG | + | chr3.4:73832426-73832445 | None:intergenic | 45.0% |
| ! | TTGCTGATCTTTGTGCTGCT+AGG | - | chr3.4:73833618-73833637 | MS.gene29080:intron | 45.0% |
| !! | AGCACAGTTGTTTTCGCCAT+TGG | + | chr3.4:73832505-73832524 | None:intergenic | 45.0% |
| !! | AGGGGTCTTTAGGGTATGTT+TGG | + | chr3.4:73834316-73834335 | None:intergenic | 45.0% |
| !! | CAGAGGAAGTACTGATTGCT+CGG | - | chr3.4:73835855-73835874 | MS.gene29080:CDS | 45.0% |
| !! | GCTCCCATGGAAAGCATTTA+TGG | - | chr3.4:73835614-73835633 | MS.gene29080:intron | 45.0% |
| !! | TGTTTGGATGAGGGTTTTGG+AGG | + | chr3.4:73834300-73834319 | None:intergenic | 45.0% |
| !! | TTGTATGATGGTGGGTTTGG+TGG | + | chr3.4:73832358-73832377 | None:intergenic | 45.0% |
| !!! | CTTGGGAGTTGAGTTTTGGA+TGG | - | chr3.4:73834109-73834128 | MS.gene29080:intron | 45.0% |
| !!! | GAGTTGAGTTTTGGATGGGA+GGG | - | chr3.4:73834114-73834133 | MS.gene29080:intron | 45.0% |
| !!! | GTTTGGATGAGGGTTTTGGA+GGG | + | chr3.4:73834299-73834318 | None:intergenic | 45.0% |
| !!! | TTTGGATGAGGGTTTTGGAG+GGG | + | chr3.4:73834298-73834317 | None:intergenic | 45.0% |
| !! | TTGAAATTTAAATAAAAAAA+AGG | + | chr3.4:73832639-73832658 | None:intergenic | 5.0% |
| !!! | TATTTTAATTTTAATTTTTG+TGG | - | chr3.4:73832979-73832998 | MS.gene29080:intron | 5.0% |
| ACCCCGTGAAAAGGACATAC+TGG | - | chr3.4:73834770-73834789 | MS.gene29080:intron | 50.0% | |
| AGGTACCTATTGAGTGTGGC+TGG | - | chr3.4:73835234-73835253 | MS.gene29080:intron | 50.0% | |
| CGAGCAGCAAGATCCAAAGT+AGG | + | chr3.4:73834688-73834707 | None:intergenic | 50.0% | |
| CTGATTGCTCGGAAAAGCCA+AGG | - | chr3.4:73835866-73835885 | MS.gene29080:CDS | 50.0% | |
| CTGTGATCTGTGCTCTTCCT+TGG | + | chr3.4:73835838-73835857 | None:intergenic | 50.0% | |
| GAGTGATGTACCCCGTGAAA+AGG | - | chr3.4:73834761-73834780 | MS.gene29080:intron | 50.0% | |
| GGCCATTTACCTGCAGGAAT+TGG | - | chr3.4:73833297-73833316 | MS.gene29080:intron | 50.0% | |
| GTGGGATAAGGCTTGGATGT+TGG | - | chr3.4:73833230-73833249 | MS.gene29080:intron | 50.0% | |
| TCCAATTTGACCAGACGGAG+CGG | - | chr3.4:73835998-73836017 | MS.gene29080:CDS | 50.0% | |
| TCTTCAGGGAACTGCTGATG+AGG | - | chr3.4:73835582-73835601 | MS.gene29080:intron | 50.0% | |
| TGTTGGGAGTGGTCCTACTT+TGG | - | chr3.4:73834672-73834691 | MS.gene29080:intron | 50.0% | |
| ! | ACGTTTTCACGGTGTGGGAA+TGG | + | chr3.4:73832421-73832440 | None:intergenic | 50.0% |
| ! | AGCACTGGACACTTCACCAA+TGG | + | chr3.4:73834915-73834934 | None:intergenic | 50.0% |
| ! | AGGAAGAGCACAGATCACAG+AGG | - | chr3.4:73835838-73835857 | MS.gene29080:intron | 50.0% |
| ! | CGTTCTGCAGGAAGTGCATA+TGG | - | chr3.4:73833549-73833568 | MS.gene29080:CDS | 50.0% |
| ! | GAGGTTGTTGATTGCTCCCA+TGG | - | chr3.4:73835601-73835620 | MS.gene29080:intron | 50.0% |
| !! | GAGTTGAGTTGACTCAGTCC+TGG | - | chr3.4:73832768-73832787 | MS.gene29080:CDS | 50.0% |
| !!! | AGTTTTGGATGGGAGGGCTT+TGG | - | chr3.4:73834120-73834139 | MS.gene29080:intron | 50.0% |
| !!! | GGAGTTGAGTTTTGGATGGG+AGG | - | chr3.4:73834113-73834132 | MS.gene29080:intron | 50.0% |
| ACCGCTCCGTCTGGTCAAAT+TGG | + | chr3.4:73836002-73836021 | None:intergenic | 55.0% | |
| AGAACAACAGCCCTCAGTCG+GGG | + | chr3.4:73834715-73834734 | None:intergenic | 55.0% | |
| GAGAACAACAGCCCTCAGTC+GGG | + | chr3.4:73834716-73834735 | None:intergenic | 55.0% | |
| GGAGAACAACAGCCCTCAGT+CGG | + | chr3.4:73834717-73834736 | None:intergenic | 55.0% | |
| GGGAGGAGTGACGTCATCAA+TGG | - | chr3.4:73832312-73832331 | MS.gene29080:CDS | 55.0% | |
| TGCTCGATTACCCCGACTGA+GGG | - | chr3.4:73834702-73834721 | MS.gene29080:intron | 55.0% | |
| TTCAGTTTGAGAGACCGCGG+AGG | - | chr3.4:73836097-73836116 | MS.gene29080:CDS | 55.0% | |
| TTCTTCTTGACCGCTCCGTC+TGG | + | chr3.4:73836011-73836030 | None:intergenic | 55.0% | |
| ! | TGGCGCGTTTTTCGTTCTGC+AGG | - | chr3.4:73833537-73833556 | MS.gene29080:CDS | 55.0% |
| ! | TTTGGATGGGAGGGCTTTGG+AGG | - | chr3.4:73834123-73834142 | MS.gene29080:intron | 55.0% |
| !! | TTGGATGGGAGGGCTTTGGA+GGG | - | chr3.4:73834124-73834143 | MS.gene29080:intron | 55.0% |
| !!! | ATGAGGGTTTTGGAGGGGAG+GGG | + | chr3.4:73834293-73834312 | None:intergenic | 55.0% |
| !!! | GATGAGGGTTTTGGAGGGGA+GGG | + | chr3.4:73834294-73834313 | None:intergenic | 55.0% |
| CTACGGACAGTCGTCAGGGA+AGG | - | chr3.4:73834460-73834479 | MS.gene29080:intron | 60.0% | |
| CTGCTCGATTACCCCGACTG+AGG | - | chr3.4:73834701-73834720 | MS.gene29080:intron | 60.0% | |
| CTGGCTACGGACAGTCGTCA+GGG | - | chr3.4:73834456-73834475 | MS.gene29080:intron | 60.0% | |
| TCTGGCTACGGACAGTCGTC+AGG | - | chr3.4:73834455-73834474 | MS.gene29080:intron | 60.0% | |
| !!! | GGATGAGGGTTTTGGAGGGG+AGG | + | chr3.4:73834295-73834314 | None:intergenic | 60.0% |
| AGCCAGTCGATGCTCCTCCG+CGG | + | chr3.4:73836114-73836133 | None:intergenic | 65.0% | |
| !!! | AGGGTTTTGGAGGGGAGGGG+AGG | + | chr3.4:73834290-73834309 | None:intergenic | 65.0% |
| !! | GACCGCGGAGGAGCATCGAC+TGG | - | chr3.4:73836109-73836128 | MS.gene29080:CDS | 70.0% |
| !! | GCGGAGGAGCATCGACTGGC+TGG | - | chr3.4:73836113-73836132 | MS.gene29080:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73832310 | 73836155 | 73832310 | ID=MS.gene29080 |
| chr3.4 | mRNA | 73832310 | 73836155 | 73832310 | ID=MS.gene29080.t1;Parent=MS.gene29080 |
| chr3.4 | exon | 73835854 | 73836155 | 73835854 | ID=MS.gene29080.t1.exon1;Parent=MS.gene29080.t1 |
| chr3.4 | CDS | 73835854 | 73836155 | 73835854 | ID=cds.MS.gene29080.t1;Parent=MS.gene29080.t1 |
| chr3.4 | exon | 73833984 | 73834020 | 73833984 | ID=MS.gene29080.t1.exon2;Parent=MS.gene29080.t1 |
| chr3.4 | CDS | 73833984 | 73834020 | 73833984 | ID=cds.MS.gene29080.t1;Parent=MS.gene29080.t1 |
| chr3.4 | exon | 73833658 | 73833894 | 73833658 | ID=MS.gene29080.t1.exon3;Parent=MS.gene29080.t1 |
| chr3.4 | CDS | 73833658 | 73833894 | 73833658 | ID=cds.MS.gene29080.t1;Parent=MS.gene29080.t1 |
| chr3.4 | exon | 73833521 | 73833568 | 73833521 | ID=MS.gene29080.t1.exon4;Parent=MS.gene29080.t1 |
| chr3.4 | CDS | 73833521 | 73833568 | 73833521 | ID=cds.MS.gene29080.t1;Parent=MS.gene29080.t1 |
| chr3.4 | exon | 73832310 | 73832876 | 73832310 | ID=MS.gene29080.t1.exon5;Parent=MS.gene29080.t1 |
| chr3.4 | CDS | 73832310 | 73832876 | 73832310 | ID=cds.MS.gene29080.t1;Parent=MS.gene29080.t1 |
| Gene Sequence |
| Protein sequence |
