Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052632.t1 | XP_013460975.1 | 90.4 | 396 | 22 | 1 | 1 | 396 | 1 | 380 | 5.20E-174 | 620.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052632.t1 | Q5ZJ01 | 48.3 | 263 | 123 | 7 | 8 | 259 | 22 | 282 | 6.0e-62 | 239.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052632.t1 | B7FM37 | 90.4 | 396 | 22 | 1 | 1 | 396 | 1 | 380 | 3.8e-174 | 620.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049369 | MS.gene052632 | 0.820032 | 8.50E-53 | -1.69E-46 |
| MS.gene050499 | MS.gene052632 | 0.822012 | 2.97E-53 | -1.69E-46 |
| MS.gene052632 | MS.gene052633 | 0.843122 | 1.70E-58 | -1.69E-46 |
| MS.gene052632 | MS.gene059368 | 0.819621 | 1.05E-52 | -1.69E-46 |
| MS.gene052632 | MS.gene060818 | 0.80557 | 1.25E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene061134 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene052632 | MS.gene06490 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene065204 | 0.830267 | 3.23E-55 | -1.69E-46 |
| MS.gene052632 | MS.gene065215 | 0.826326 | 2.88E-54 | -1.69E-46 |
| MS.gene052632 | MS.gene067332 | 0.808639 | 2.81E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene069167 | 0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene07427 | 0.833383 | 5.51E-56 | -1.69E-46 |
| MS.gene052632 | MS.gene07428 | 0.83058 | 2.71E-55 | -1.69E-46 |
| MS.gene052632 | MS.gene08520 | 0.809515 | 1.82E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene08833 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene22737 | 0.809617 | 1.73E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene22910 | 0.815634 | 8.36E-52 | -1.69E-46 |
| MS.gene052632 | MS.gene23025 | 0.808933 | 2.43E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene24238 | 0.821669 | 3.57E-53 | -1.69E-46 |
| MS.gene052632 | MS.gene27261 | 0.824382 | 8.32E-54 | -1.69E-46 |
| MS.gene052632 | MS.gene28132 | 0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene052632 | MS.gene28490 | 0.836578 | 8.62E-57 | -1.69E-46 |
| MS.gene052632 | MS.gene29080 | 0.888668 | 4.81E-73 | -1.69E-46 |
| MS.gene052632 | MS.gene29182 | 0.807755 | 4.33E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene34683 | 0.811508 | 6.76E-51 | -1.69E-46 |
| MS.gene052632 | MS.gene35338 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene36506 | 0.806648 | 7.43E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene37159 | 0.800342 | 1.51E-48 | -1.69E-46 |
| MS.gene052632 | MS.gene39678 | 0.819059 | 1.42E-52 | -1.69E-46 |
| MS.gene052632 | MS.gene44296 | 0.804526 | 2.07E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene48355 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene49365 | 0.818258 | 2.15E-52 | -1.69E-46 |
| MS.gene052632 | MS.gene49500 | 0.8122 | 4.78E-51 | -1.69E-46 |
| MS.gene052632 | MS.gene50561 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene51807 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene58120 | 0.80094 | 1.14E-48 | -1.69E-46 |
| MS.gene052632 | MS.gene59571 | 0.826425 | 2.73E-54 | -1.69E-46 |
| MS.gene052632 | MS.gene60605 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene052632 | MS.gene70087 | 0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene70167 | 0.809411 | 1.92E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene70715 | 0.893369 | 6.70E-75 | -1.69E-46 |
| MS.gene052632 | MS.gene73339 | 0.814218 | 1.72E-51 | -1.69E-46 |
| MS.gene052632 | MS.gene75560 | 0.813329 | 2.71E-51 | -1.69E-46 |
| MS.gene052632 | MS.gene76346 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene78717 | 0.900872 | 4.74E-78 | -1.69E-46 |
| MS.gene052632 | MS.gene79726 | 0.813057 | 3.10E-51 | -1.69E-46 |
| MS.gene052632 | MS.gene82008 | 0.819793 | 9.64E-53 | -1.69E-46 |
| MS.gene052632 | MS.gene85601 | 0.830101 | 3.55E-55 | -1.69E-46 |
| MS.gene052632 | MS.gene86011 | 0.807688 | 4.47E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene87404 | 0.838864 | 2.23E-57 | -1.69E-46 |
| MS.gene052632 | MS.gene90538 | 0.80979 | 1.59E-50 | -1.69E-46 |
| MS.gene052632 | MS.gene93035 | 0.814202 | 1.74E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041293 | MS.gene052632 | PPI |
| MS.gene80865 | MS.gene052632 | PPI |
| MS.gene62602 | MS.gene052632 | PPI |
| MS.gene052632 | MS.gene040250 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052632.t1 | MTR_3g075410 | 95.202 | 396 | 3 | 1 | 1 | 396 | 1 | 380 | 0.0 | 774 |
| MS.gene052632.t1 | MTR_7g032640 | 73.418 | 395 | 79 | 4 | 1 | 395 | 1 | 369 | 0.0 | 577 |
| MS.gene052632.t1 | MTR_7g017430 | 63.228 | 378 | 116 | 3 | 1 | 377 | 1 | 356 | 4.81e-168 | 475 |
| MS.gene052632.t1 | MTR_6g018930 | 58.491 | 371 | 120 | 6 | 1 | 355 | 1 | 353 | 2.60e-145 | 417 |
| MS.gene052632.t1 | MTR_8g037335 | 55.911 | 313 | 128 | 4 | 1 | 306 | 1 | 310 | 1.58e-116 | 343 |
| MS.gene052632.t1 | MTR_5g029210 | 57.966 | 295 | 117 | 3 | 1 | 288 | 1 | 295 | 2.23e-115 | 342 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052632.t1 | AT4G24760 | 69.598 | 398 | 85 | 6 | 1 | 396 | 1 | 364 | 0.0 | 558 |
| MS.gene052632.t1 | AT5G14390 | 67.574 | 404 | 86 | 7 | 1 | 395 | 1 | 368 | 0.0 | 535 |
| MS.gene052632.t1 | AT3G01690 | 66.076 | 395 | 99 | 4 | 1 | 395 | 1 | 360 | 0.0 | 523 |
| MS.gene052632.t1 | AT3G30380 | 61.358 | 383 | 112 | 7 | 1 | 377 | 1 | 353 | 5.79e-160 | 455 |
| MS.gene052632.t1 | AT3G30380 | 61.358 | 383 | 112 | 7 | 1 | 377 | 1 | 353 | 1.00e-159 | 455 |
| MS.gene052632.t1 | AT5G38220 | 61.043 | 326 | 121 | 4 | 1 | 326 | 1 | 320 | 2.36e-143 | 411 |
| MS.gene052632.t1 | AT5G38220 | 61.043 | 326 | 121 | 4 | 1 | 326 | 1 | 320 | 2.36e-143 | 411 |
| MS.gene052632.t1 | AT1G13610 | 61.329 | 331 | 109 | 8 | 1 | 321 | 1 | 322 | 4.61e-134 | 388 |
| MS.gene052632.t1 | AT1G66900 | 66.914 | 269 | 88 | 1 | 1 | 268 | 1 | 269 | 6.13e-134 | 385 |
| MS.gene052632.t1 | AT4G31020 | 60.976 | 287 | 107 | 1 | 1 | 282 | 1 | 287 | 1.85e-128 | 372 |
| MS.gene052632.t1 | AT4G31020 | 60.976 | 287 | 107 | 1 | 1 | 282 | 1 | 287 | 1.85e-128 | 372 |
| MS.gene052632.t1 | AT2G24320 | 58.537 | 287 | 113 | 2 | 1 | 282 | 1 | 286 | 1.03e-124 | 362 |
| MS.gene052632.t1 | AT2G24320 | 58.214 | 280 | 111 | 2 | 8 | 282 | 1 | 279 | 9.06e-121 | 352 |
| MS.gene052632.t1 | AT1G32190 | 53.922 | 306 | 129 | 4 | 1 | 295 | 1 | 305 | 4.30e-110 | 329 |
| MS.gene052632.t1 | AT5G38220 | 70.673 | 208 | 59 | 2 | 1 | 208 | 1 | 206 | 6.72e-105 | 310 |
| MS.gene052632.t1 | AT1G13610 | 61.033 | 213 | 69 | 5 | 115 | 321 | 18 | 222 | 4.35e-78 | 242 |
| MS.gene052632.t1 | AT1G32190 | 57.297 | 185 | 76 | 3 | 114 | 296 | 38 | 221 | 6.69e-66 | 213 |
Find 85 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGAAATACGAGCCTTTA+TGG | 0.179223 | 3.1:+62571525 | MS.gene052632:CDS |
| TTCTTCTAAAACTCAGTCTT+TGG | 0.197920 | 3.1:-62571640 | None:intergenic |
| GCTCCCATGGAAAGCATTTA+TGG | 0.211941 | 3.1:+62571492 | MS.gene052632:CDS |
| CTGAGATGTCTAAGGTATTC+TGG | 0.212636 | 3.1:-62571584 | None:intergenic |
| TCTGTCTTATCAGTACTTCT+TGG | 0.247819 | 3.1:-62571794 | None:intergenic |
| CAGGAAGATATAATCCTTTA+TGG | 0.268151 | 3.1:+62570520 | MS.gene052632:CDS |
| CTGAACATCGACACTTCTTC+TGG | 0.268960 | 3.1:-62571957 | None:intergenic |
| AGATGGAAATCACTGTAATT+TGG | 0.273725 | 3.1:+62571553 | MS.gene052632:CDS |
| CACTTCTTCTGGATTTCTCT+TGG | 0.303385 | 3.1:-62571946 | None:intergenic |
| CACTTGCGTGTTAATCTCAT+TGG | 0.312709 | 3.1:+62568495 | MS.gene052632:CDS |
| ACCGCTCCGTCTGGTCAAAT+TGG | 0.322966 | 3.1:-62571877 | None:intergenic |
| CTGTGATCTGTGCTCTTCCT+TGG | 0.329846 | 3.1:-62571761 | None:intergenic |
| AGTAACAGGTTTGTTGTTGA+TGG | 0.340238 | 3.1:+62568299 | MS.gene052632:CDS |
| CTGTGATCTGTGCTCTTCCT+TGG | 0.342686 | 3.1:-62571713 | None:intergenic |
| ATACTGGTTTGACATCTATA+AGG | 0.350777 | 3.1:+62570663 | MS.gene052632:CDS |
| CTCCATAGTCCTATACTATC+GGG | 0.395584 | 3.1:+62570610 | MS.gene052632:CDS |
| CTTAACTTCTCTAATTTCTC+AGG | 0.396675 | 3.1:-62571851 | None:intergenic |
| TTTCCATCTTTGAGCCATAA+AGG | 0.404459 | 3.1:-62571539 | None:intergenic |
| CTCCCATGGAAAGCATTTAT+GGG | 0.407681 | 3.1:+62571493 | MS.gene052632:CDS |
| CGAACAATCAGTACTTCCTC+TGG | 0.409662 | 3.1:-62571684 | None:intergenic |
| ATCCTTTATGGTCAATCTGT+TGG | 0.416151 | 3.1:+62570532 | MS.gene052632:CDS |
| TCCTTTATGGTCAATCTGTT+GGG | 0.417819 | 3.1:+62570533 | MS.gene052632:CDS |
| ATCTCAATTCCACGTCGATT+AGG | 0.419995 | 3.1:-62568363 | None:intergenic |
| TCTTCTAAAACTCAGTCTTT+GGG | 0.420393 | 3.1:-62571639 | None:intergenic |
| CTCATCAAAGAAGAAGTAAC+AGG | 0.422757 | 3.1:+62568285 | MS.gene052632:CDS |
| TGTTGGGAGTGGTCCTACTT+TGG | 0.422954 | 3.1:+62570549 | MS.gene052632:CDS |
| AGTTTGTATGAAGGTGGGTT+TGG | 0.424246 | 3.1:-62568264 | None:intergenic |
| TCTGGCTACGGACAGTCGTC+AGG | 0.439666 | 3.1:+62570332 | MS.gene052632:CDS |
| TTCTTCTTGACCGCTCCGTC+TGG | 0.442109 | 3.1:-62571886 | None:intergenic |
| CAGAGGAAGTACTGATTGTT+CGG | 0.447084 | 3.1:+62571685 | MS.gene052632:CDS |
| ACCCCGATAGTATAGGACTA+TGG | 0.448961 | 3.1:-62570612 | None:intergenic |
| ACTTGCGTGTTAATCTCATT+GGG | 0.456267 | 3.1:+62568496 | MS.gene052632:CDS |
| TCTCCATAGTCCTATACTAT+CGG | 0.466854 | 3.1:+62570609 | MS.gene052632:CDS |
| GTCTTATCAGTACTTCTTGG+TGG | 0.469855 | 3.1:-62571791 | None:intergenic |
| TTGTATGAAGGTGGGTTTGG+TGG | 0.474873 | 3.1:-62568261 | None:intergenic |
| AAGTGTCTTGAAGAGAACTA+TGG | 0.478313 | 3.1:+62570490 | MS.gene052632:CDS |
| GCGGAAGAGCATCGACTGGC+TGG | 0.482932 | 3.1:+62571991 | MS.gene052632:CDS |
| TCCCAACAGATTGACCATAA+AGG | 0.485033 | 3.1:-62570534 | None:intergenic |
| TTGATGAGTTTGTATGAAGG+TGG | 0.487955 | 3.1:-62568270 | None:intergenic |
| ACCCCGTGAAAAGGACATAC+TGG | 0.492094 | 3.1:+62570647 | MS.gene052632:CDS |
| AGAGAACTATGGTGCTAAGC+AGG | 0.495083 | 3.1:+62570501 | MS.gene052632:CDS |
| ACAACTGTGCTGTACTCTCA+TGG | 0.498182 | 3.1:+62568420 | MS.gene052632:CDS |
| GAGAACAACAGCCCTCAGTC+GGG | 0.509984 | 3.1:-62570590 | None:intergenic |
| CATGGAAATGCTGCTGACAT+TGG | 0.511990 | 3.1:+62568438 | MS.gene052632:CDS |
| ACTCTCAACCCCGATAGTAT+AGG | 0.512348 | 3.1:-62570619 | None:intergenic |
| CTTACATGAATTACTAGCAC+TGG | 0.512410 | 3.1:-62570804 | None:intergenic |
| GAGGTTGTTGATTGCTCCCA+TGG | 0.513066 | 3.1:+62571479 | MS.gene052632:CDS |
| GAACATTGATAAAATTCCAT+TGG | 0.515486 | 3.1:+62570773 | MS.gene052632:intron |
| TGATGAGTTTGTATGAAGGT+GGG | 0.516551 | 3.1:-62568269 | None:intergenic |
| TATGGTCAATCTGTTGGGAG+TGG | 0.517208 | 3.1:+62570538 | MS.gene052632:CDS |
| GAGCCTTTATGGCTCAAAGA+TGG | 0.522856 | 3.1:+62571536 | MS.gene052632:CDS |
| GAGTGATGTACCCCGTGAAA+AGG | 0.530450 | 3.1:+62570638 | MS.gene052632:CDS |
| GGGAGGAGTGACGTCATCAA+TGG | 0.544062 | 3.1:+62568218 | MS.gene052632:CDS |
| GCTCCCATAAATGCTTTCCA+TGG | 0.545857 | 3.1:-62571496 | None:intergenic |
| CAGAGGAAGTACTGATTGCT+CGG | 0.546473 | 3.1:+62571733 | MS.gene052632:CDS |
| GCATGCAGATACGATTACTC+TGG | 0.564063 | 3.1:+62570314 | MS.gene052632:intron |
| GACCGCGGAAGAGCATCGAC+TGG | 0.564877 | 3.1:+62571987 | MS.gene052632:CDS |
| GGAGAACAACAGCCCTCAGT+CGG | 0.578144 | 3.1:-62570591 | None:intergenic |
| CTCCCATAAATGCTTTCCAT+GGG | 0.578838 | 3.1:-62571495 | None:intergenic |
| TGCTCGATTACCCCGACTGA+GGG | 0.581528 | 3.1:+62570579 | MS.gene052632:CDS |
| TCTTCAGGGAACCGCTGATG+AGG | 0.582090 | 3.1:+62571460 | MS.gene052632:intron |
| TCTTTGATGAGTTTGTATGA+AGG | 0.586057 | 3.1:-62568273 | None:intergenic |
| CTAAAACTCAGTCTTTGGGA+TGG | 0.593010 | 3.1:-62571635 | None:intergenic |
| AGCACTGGACACTTCACCAA+TGG | 0.598967 | 3.1:-62570789 | None:intergenic |
| TCCAATTTGACCAGACGGAG+CGG | 0.605274 | 3.1:+62571876 | MS.gene052632:CDS |
| AAGAGTCCAATTTGACCAGA+CGG | 0.606214 | 3.1:+62571871 | MS.gene052632:CDS |
| GCATACGTATTATGCTCACT+TGG | 0.606829 | 3.1:-62570448 | None:intergenic |
| CTGGCTACGGACAGTCGTCA+GGG | 0.608648 | 3.1:+62570333 | MS.gene052632:CDS |
| CTGATTGCTCGGAAAAGCCA+AGG | 0.613588 | 3.1:+62571744 | MS.gene052632:CDS |
| CTGATTGTTCGGAAAAGCCA+AGG | 0.613774 | 3.1:+62571696 | MS.gene052632:CDS |
| CGAGCAGCAAGATCCAAAGT+AGG | 0.615910 | 3.1:-62570562 | None:intergenic |
| AGCCAGTCGATGCTCTTCCG+CGG | 0.619403 | 3.1:-62571989 | None:intergenic |
| TATGTATGTTCGTCATCCAA+TGG | 0.620144 | 3.1:+62568392 | MS.gene052632:CDS |
| TTGAAATTTCCTAATCGACG+TGG | 0.629349 | 3.1:+62568354 | MS.gene052632:CDS |
| CTACGGACAGTCGTCAGGGA+AGG | 0.630140 | 3.1:+62570337 | MS.gene052632:CDS |
| CTGCTCGATTACCCCGACTG+AGG | 0.632658 | 3.1:+62570578 | MS.gene052632:CDS |
| TCTCAGAAAATTCATATCGA+CGG | 0.640818 | 3.1:+62571601 | MS.gene052632:CDS |
| TCCATAGTCCTATACTATCG+GGG | 0.640930 | 3.1:+62570611 | MS.gene052632:CDS |
| AGATACGATTACTCTGGCTA+CGG | 0.649102 | 3.1:+62570320 | MS.gene052632:intron |
| GCAATCAACAACCTCATCAG+CGG | 0.671630 | 3.1:-62571471 | None:intergenic |
| AGAAGTGCGTAAGCAATGGG+AGG | 0.678812 | 3.1:+62568201 | None:intergenic |
| ATGTTCAGTTTGAGAGACCG+CGG | 0.679252 | 3.1:+62571972 | MS.gene052632:CDS |
| AGAACAACAGCCCTCAGTCG+GGG | 0.685237 | 3.1:-62570589 | None:intergenic |
| GATAGGGTTAAACAATCCAG+AGG | 0.687055 | 3.1:+62571668 | MS.gene052632:CDS |
| AGGAAGAGCACAGATCACAG+AGG | 0.761146 | 3.1:+62571716 | MS.gene052632:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATTAAAAAAGAAAAA+TGG | + | chr3.1:62571192-62571211 | MS.gene052632:intron | 10.0% |
| !!! | TCTAGTTTTTTTTTTTTTTT+GGG | + | chr3.1:62571388-62571407 | MS.gene052632:intron | 10.0% |
| !!! | TTTCTTTTTTAATATTACTT+CGG | - | chr3.1:62571190-62571209 | None:intergenic | 10.0% |
| !! | AAAAATAAGACTCAAATTAA+AGG | - | chr3.1:62569785-62569804 | None:intergenic | 15.0% |
| !! | ACAATTAACAATTTCTATAA+TGG | + | chr3.1:62570913-62570932 | MS.gene052632:intron | 15.0% |
| !! | ATTGAAAATTGAAGAAAATA+CGG | - | chr3.1:62568523-62568542 | None:intergenic | 15.0% |
| !!! | CTCTAGTTTTTTTTTTTTTT+TGG | + | chr3.1:62571387-62571406 | MS.gene052632:intron | 15.0% |
| !!! | CTTTTATCAACAAAAAAAAA+AGG | - | chr3.1:62571167-62571186 | None:intergenic | 15.0% |
| !!! | GACTTTTCTTTATTAAATTA+AGG | - | chr3.1:62570145-62570164 | None:intergenic | 15.0% |
| !!! | GTTTGTTATAAAAAACTATA+TGG | + | chr3.1:62570254-62570273 | MS.gene052632:intron | 15.0% |
| !!! | TAGGTTAATTTTTTTTTGTT+TGG | + | chr3.1:62568704-62568723 | MS.gene052632:intron | 15.0% |
| !! | AAAAATGAGAACAAAAGAAA+AGG | - | chr3.1:62569233-62569252 | None:intergenic | 20.0% |
| !! | AAAATGGAAACAAAGAAAAT+TGG | + | chr3.1:62571208-62571227 | MS.gene052632:intron | 20.0% |
| !! | AAAGCAAGGAATTAAATAAA+AGG | - | chr3.1:62569590-62569609 | None:intergenic | 20.0% |
| !! | AAATGGAAACAAAGAAAATT+GGG | + | chr3.1:62571209-62571228 | MS.gene052632:intron | 20.0% |
| !! | AAGCAAGGAATTAAATAAAA+GGG | - | chr3.1:62569589-62569608 | None:intergenic | 20.0% |
| !! | AATTAAATAAAAGGGTTTGA+TGG | - | chr3.1:62569581-62569600 | None:intergenic | 20.0% |
| !! | AGATGACAAGAATATAATTT+AGG | - | chr3.1:62571335-62571354 | None:intergenic | 20.0% |
| !! | ATGCAAAAAATAGTATATTG+AGG | + | chr3.1:62569877-62569896 | MS.gene052632:intron | 20.0% |
| !! | GCTAGGAATAATATTTAAAT+TGG | + | chr3.1:62569512-62569531 | MS.gene052632:intron | 20.0% |
| !! | GGAATAATATTTAAATTGGT+TGG | + | chr3.1:62569516-62569535 | MS.gene052632:intron | 20.0% |
| !! | TTCATATTGCTTTACTAATT+TGG | + | chr3.1:62571421-62571440 | MS.gene052632:intron | 20.0% |
| !!! | AAAGAAACTGTTTTTTTGAA+AGG | + | chr3.1:62569833-62569852 | MS.gene052632:intron | 20.0% |
| !!! | AACAATTTCTATAATGGTTT+TGG | + | chr3.1:62570919-62570938 | MS.gene052632:intron | 20.0% |
| !!! | AGTGTAATTGAAGTATTATA+CGG | - | chr3.1:62570092-62570111 | None:intergenic | 20.0% |
| !!! | ATCATTCTTATATTTTCTTC+AGG | + | chr3.1:62571445-62571464 | MS.gene052632:intron | 20.0% |
| !!! | CTCATTTTTAGATTTTAGAT+AGG | + | chr3.1:62569244-62569263 | MS.gene052632:intron | 20.0% |
| !!! | GAGTAAATTTTTCAGATAAT+TGG | - | chr3.1:62569069-62569088 | None:intergenic | 20.0% |
| !!! | TCATTAGTTTATGATATGAA+GGG | + | chr3.1:62568819-62568838 | MS.gene052632:intron | 20.0% |
| !!! | TCATTCTTATATTTTCTTCA+GGG | + | chr3.1:62571446-62571465 | MS.gene052632:intron | 20.0% |
| !!! | TGATTTTAAATAACAATGTG+CGG | - | chr3.1:62571019-62571038 | None:intergenic | 20.0% |
| !!! | TGATTTTGATGTGATTTTTA+GGG | + | chr3.1:62568730-62568749 | MS.gene052632:intron | 20.0% |
| !!! | TTGATTTTGATGTGATTTTT+AGG | + | chr3.1:62568729-62568748 | MS.gene052632:intron | 20.0% |
| ! | AAAATCGAACAAAATAAGCA+TGG | - | chr3.1:62570834-62570853 | None:intergenic | 25.0% |
| ! | AAATTTACTGTAGGGATTTA+AGG | + | chr3.1:62569141-62569160 | MS.gene052632:intron | 25.0% |
| ! | AATGGAAACAAAGAAAATTG+GGG | + | chr3.1:62571210-62571229 | MS.gene052632:intron | 25.0% |
| ! | AATTTACTGTAGGGATTTAA+GGG | + | chr3.1:62569142-62569161 | MS.gene052632:intron | 25.0% |
| ! | ACAAAGATCAGCAAATATTA+AGG | - | chr3.1:62569489-62569508 | None:intergenic | 25.0% |
| ! | ACATTAAAATACGAAAACGA+TGG | - | chr3.1:62569022-62569041 | None:intergenic | 25.0% |
| ! | ACTAAGTATTACTAACACTT+TGG | + | chr3.1:62569700-62569719 | MS.gene052632:intron | 25.0% |
| ! | AGATCTAACAAATTTACTGT+AGG | + | chr3.1:62569132-62569151 | MS.gene052632:intron | 25.0% |
| ! | ATTAGTAGAAATGTAGAATG+TGG | + | chr3.1:62568965-62568984 | MS.gene052632:intron | 25.0% |
| ! | CATCTTGTGAATATGTAATT+TGG | + | chr3.1:62571350-62571369 | MS.gene052632:intron | 25.0% |
| ! | CTGTAACTGAATTATCAAAT+GGG | + | chr3.1:62568586-62568605 | MS.gene052632:intron | 25.0% |
| ! | CTTCATATCATAAACTAATG+AGG | - | chr3.1:62568820-62568839 | None:intergenic | 25.0% |
| ! | CTTTAAACAAGTAAATTACC+AGG | - | chr3.1:62568666-62568685 | None:intergenic | 25.0% |
| ! | GAACATTGATAAAATTCCAT+TGG | + | chr3.1:62570773-62570792 | MS.gene052632:intron | 25.0% |
| ! | GACAAGAATATAATTTAGGT+TGG | - | chr3.1:62571331-62571350 | None:intergenic | 25.0% |
| ! | GATCTAACAAATTTACTGTA+GGG | + | chr3.1:62569133-62569152 | MS.gene052632:intron | 25.0% |
| ! | TATGGTGACAAAATATTAGA+TGG | - | chr3.1:62570860-62570879 | None:intergenic | 25.0% |
| ! | TCATCTGTTATTGAGTTATT+GGG | - | chr3.1:62569659-62569678 | None:intergenic | 25.0% |
| ! | TCTGTAACTGAATTATCAAA+TGG | + | chr3.1:62568585-62568604 | MS.gene052632:intron | 25.0% |
| ! | TTCATCTGTTATTGAGTTAT+TGG | - | chr3.1:62569660-62569679 | None:intergenic | 25.0% |
| !! | AAACAAGAAAGAAGCATATA+AGG | - | chr3.1:62570369-62570388 | None:intergenic | 25.0% |
| !! | AAGAGAAGCATAATGAAAAA+CGG | + | chr3.1:62570412-62570431 | MS.gene052632:intron | 25.0% |
| !! | CTCATTAGTTTATGATATGA+AGG | + | chr3.1:62568818-62568837 | MS.gene052632:intron | 25.0% |
| !! | GTTAGAAGATAAGGATTTTA+AGG | + | chr3.1:62568889-62568908 | MS.gene052632:intron | 25.0% |
| !! | TAAGGCTAAAACTTAAGTTT+TGG | - | chr3.1:62569471-62569490 | None:intergenic | 25.0% |
| !! | TAATTTTTGTGGTTCTTATG+TGG | + | chr3.1:62568867-62568886 | MS.gene052632:intron | 25.0% |
| !!! | AAACTGTTTTTTTGAAAGGA+TGG | + | chr3.1:62569837-62569856 | MS.gene052632:intron | 25.0% |
| !!! | ACCTTTTAGAATCAATCTAA+GGG | + | chr3.1:62569959-62569978 | MS.gene052632:intron | 25.0% |
| !!! | TTTTTGTTTCTTGTTTCACT+GGG | - | chr3.1:62571258-62571277 | None:intergenic | 25.0% |
| AAATGTAGAATGTGGTGATT+GGG | + | chr3.1:62568973-62568992 | MS.gene052632:intron | 30.0% | |
| ACATTAAAACACGAAAACGA+TGG | - | chr3.1:62568936-62568955 | None:intergenic | 30.0% | |
| ACTGTAAAAGACCATAAAGT+TGG | + | chr3.1:62569336-62569355 | MS.gene052632:intron | 30.0% | |
| AGAAACAAAAAGCTAGAGAA+AGG | + | chr3.1:62571267-62571286 | MS.gene052632:intron | 30.0% | |
| AGATGGAAATCACTGTAATT+TGG | + | chr3.1:62571553-62571572 | MS.gene052632:CDS | 30.0% | |
| AGTGCATTTACTACATGATA+TGG | + | chr3.1:62569310-62569329 | MS.gene052632:intron | 30.0% | |
| AGTTTGGATTAATCTTTGGT+TGG | - | chr3.1:62571294-62571313 | None:intergenic | 30.0% | |
| ATATGTGAACTCTGCATATT+TGG | - | chr3.1:62569752-62569771 | None:intergenic | 30.0% | |
| ATGGAAACAAAGAAAATTGG+GGG | + | chr3.1:62571211-62571230 | MS.gene052632:intron | 30.0% | |
| CACTTGTTTAGTTGTTAGTT+AGG | + | chr3.1:62568762-62568781 | MS.gene052632:intron | 30.0% | |
| CAGGAAGATATAATCCTTTA+TGG | + | chr3.1:62570520-62570539 | MS.gene052632:CDS | 30.0% | |
| CCATCTAATTACCAACTTTA+TGG | - | chr3.1:62569350-62569369 | None:intergenic | 30.0% | |
| CTTAACTTCTCTAATTTCTC+AGG | - | chr3.1:62571854-62571873 | None:intergenic | 30.0% | |
| TATTTGATGTCCTTTGCTTT+CGG | + | chr3.1:62570708-62570727 | MS.gene052632:intron | 30.0% | |
| TCTCAGAAAATTCATATCGA+CGG | + | chr3.1:62571601-62571620 | MS.gene052632:CDS | 30.0% | |
| TCTTATGTGGTTAGAAGATA+AGG | + | chr3.1:62568880-62568899 | MS.gene052632:intron | 30.0% | |
| TCTTTGATGAGTTTGTATGA+AGG | - | chr3.1:62568276-62568295 | None:intergenic | 30.0% | |
| TTTGGATTCTTGATATACCA+AGG | + | chr3.1:62569718-62569737 | MS.gene052632:intron | 30.0% | |
| ! | ACCCTTAGATTGATTCTAAA+AGG | - | chr3.1:62569963-62569982 | None:intergenic | 30.0% |
| ! | AGGTTTGATTTAGTCAAAGA+TGG | + | chr3.1:62568782-62568801 | MS.gene052632:intron | 30.0% |
| ! | AGTCAAAGATGGGAAATTTT+TGG | + | chr3.1:62568793-62568812 | MS.gene052632:intron | 30.0% |
| ! | ATAAGCTAGTTTACACAAGT+AGG | + | chr3.1:62571084-62571103 | MS.gene052632:intron | 30.0% |
| ! | CGTTAGTTTGGATTAATCTT+TGG | - | chr3.1:62571298-62571317 | None:intergenic | 30.0% |
| ! | GGTTTGATTTAGTCAAAGAT+GGG | + | chr3.1:62568783-62568802 | MS.gene052632:intron | 30.0% |
| ! | TAGATTGATTCTAAAAGGTG+AGG | - | chr3.1:62569958-62569977 | None:intergenic | 30.0% |
| ! | TCAAAACTTCAACGTTTTCA+CGG | - | chr3.1:62568338-62568357 | None:intergenic | 30.0% |
| !! | AGAAGATAAGGATTTTAAGG+TGG | + | chr3.1:62568892-62568911 | MS.gene052632:intron | 30.0% |
| !! | ATACTGGTTTGACATCTATA+AGG | + | chr3.1:62570663-62570682 | MS.gene052632:CDS | 30.0% |
| !! | CCATAAAGTTGGTAATTAGA+TGG | + | chr3.1:62569347-62569366 | MS.gene052632:intron | 30.0% |
| !! | CTATTTTAAAGGGGTCTTTA+GGG | - | chr3.1:62570202-62570221 | None:intergenic | 30.0% |
| !! | CTTTTTGTTTCTTGTTTCAC+TGG | - | chr3.1:62571259-62571278 | None:intergenic | 30.0% |
| !! | TCTTCTAAAACTCAGTCTTT+GGG | - | chr3.1:62571642-62571661 | None:intergenic | 30.0% |
| !! | TCTTGAATGTTACTTTCATG+TGG | + | chr3.1:62569808-62569827 | MS.gene052632:intron | 30.0% |
| !! | TTCTTCTAAAACTCAGTCTT+TGG | - | chr3.1:62571643-62571662 | None:intergenic | 30.0% |
| !! | TTTTAGAAGAAGTGTGGATA+GGG | + | chr3.1:62571652-62571671 | MS.gene052632:CDS | 30.0% |
| !!! | CACCTTTTAGAATCAATCTA+AGG | + | chr3.1:62569958-62569977 | MS.gene052632:intron | 30.0% |
| !!! | TGAATTTTCTGAGATGTCTA+AGG | - | chr3.1:62571595-62571614 | None:intergenic | 30.0% |
| AACAGAAATACGAGCCTTTA+TGG | + | chr3.1:62571525-62571544 | MS.gene052632:CDS | 35.0% | |
| AAGAAAATTGGGGGAACAAA+TGG | + | chr3.1:62571220-62571239 | MS.gene052632:intron | 35.0% | |
| AAGTGTCTTGAAGAGAACTA+TGG | + | chr3.1:62570490-62570509 | MS.gene052632:CDS | 35.0% | |
| ACTTGCGTGTTAATCTCATT+GGG | + | chr3.1:62568496-62568515 | MS.gene052632:CDS | 35.0% | |
| AGTATATTGAGGCACAGATA+AGG | + | chr3.1:62569888-62569907 | MS.gene052632:intron | 35.0% | |
| AGTTTACACAAGTAGGAAGT+AGG | + | chr3.1:62571091-62571110 | MS.gene052632:intron | 35.0% | |
| ATACAAGATTCCGAAAGCAA+AGG | - | chr3.1:62570721-62570740 | None:intergenic | 35.0% | |
| ATCCTTTATGGTCAATCTGT+TGG | + | chr3.1:62570532-62570551 | MS.gene052632:CDS | 35.0% | |
| ATTGAGTTATTGGGCATCTA+AGG | - | chr3.1:62569650-62569669 | None:intergenic | 35.0% | |
| CAGTATGAACACTAAACTAG+CGG | - | chr3.1:62570969-62570988 | None:intergenic | 35.0% | |
| CTCATCAAAGAAGAAGTAAC+AGG | + | chr3.1:62568285-62568304 | MS.gene052632:CDS | 35.0% | |
| CTTACATGAATTACTAGCAC+TGG | - | chr3.1:62570807-62570826 | None:intergenic | 35.0% | |
| GAAATGTAGAATGTGGTGAT+TGG | + | chr3.1:62568972-62568991 | MS.gene052632:intron | 35.0% | |
| GAAGCTTGATTGTAGTGATT+AGG | + | chr3.1:62568685-62568704 | MS.gene052632:intron | 35.0% | |
| GACAGCAACAACATAAACTA+TGG | - | chr3.1:62570878-62570897 | None:intergenic | 35.0% | |
| GAGCGGTTACATTCAATTTA+GGG | + | chr3.1:62569612-62569631 | MS.gene052632:intron | 35.0% | |
| GCAAAGGACATCAAATACAT+AGG | - | chr3.1:62570705-62570724 | None:intergenic | 35.0% | |
| GGGATTTAAGGGATATGAAA+TGG | + | chr3.1:62569153-62569172 | MS.gene052632:intron | 35.0% | |
| GGTGACAAAATATTAGATGG+TGG | - | chr3.1:62570857-62570876 | None:intergenic | 35.0% | |
| GTATATTGAGGCACAGATAA+GGG | + | chr3.1:62569889-62569908 | MS.gene052632:intron | 35.0% | |
| TATGTATGTTCGTCATCCAA+TGG | + | chr3.1:62568392-62568411 | MS.gene052632:CDS | 35.0% | |
| TCCTTTATGGTCAATCTGTT+GGG | + | chr3.1:62570533-62570552 | MS.gene052632:CDS | 35.0% | |
| TCTCCATAGTCCTATACTAT+CGG | + | chr3.1:62570609-62570628 | MS.gene052632:CDS | 35.0% | |
| TCTGTCTTATCAGTACTTCT+TGG | - | chr3.1:62571797-62571816 | None:intergenic | 35.0% | |
| TGAGCGGTTACATTCAATTT+AGG | + | chr3.1:62569611-62569630 | MS.gene052632:intron | 35.0% | |
| TGATGAGTTTGTATGAAGGT+GGG | - | chr3.1:62568272-62568291 | None:intergenic | 35.0% | |
| TTAATTCCTTGCTTTGTGAG+CGG | + | chr3.1:62569595-62569614 | MS.gene052632:intron | 35.0% | |
| TTCACAAGTAGGAGTAATGT+TGG | + | chr3.1:62569914-62569933 | MS.gene052632:intron | 35.0% | |
| TTGAAATTTCCTAATCGACG+TGG | + | chr3.1:62568354-62568373 | MS.gene052632:CDS | 35.0% | |
| TTGATGAGTTTGTATGAAGG+TGG | - | chr3.1:62568273-62568292 | None:intergenic | 35.0% | |
| TTTCCATCTTTGAGCCATAA+AGG | - | chr3.1:62571542-62571561 | None:intergenic | 35.0% | |
| ! | AAACCAGTATGTCCTTTTCA+CGG | - | chr3.1:62570653-62570672 | None:intergenic | 35.0% |
| ! | AATCAATCTAAGGGTATGCT+TGG | + | chr3.1:62569968-62569987 | MS.gene052632:intron | 35.0% |
| ! | ATCAATCTAAGGGTATGCTT+GGG | + | chr3.1:62569969-62569988 | MS.gene052632:intron | 35.0% |
| ! | TCAGATGTATGAGCTTTTTG+TGG | + | chr3.1:62568461-62568480 | MS.gene052632:CDS | 35.0% |
| ! | TTTAGGGTATGTTTGGATGA+GGG | - | chr3.1:62570186-62570205 | None:intergenic | 35.0% |
| ! | TTTCTTGTTTCACTGGGTAT+AGG | - | chr3.1:62571252-62571271 | None:intergenic | 35.0% |
| !! | AAAGACCCCTTTAAAATAGC+TGG | + | chr3.1:62570203-62570222 | MS.gene052632:intron | 35.0% |
| !! | AAGCAAGCCAGCTATTTTAA+AGG | - | chr3.1:62570213-62570232 | None:intergenic | 35.0% |
| !! | AGCAAGCCAGCTATTTTAAA+GGG | - | chr3.1:62570212-62570231 | None:intergenic | 35.0% |
| !! | AGTAACAGGTTTGTTGTTGA+TGG | + | chr3.1:62568299-62568318 | MS.gene052632:CDS | 35.0% |
| !! | CGTTCTATACTTATTTCTGC+AGG | - | chr3.1:62571050-62571069 | None:intergenic | 35.0% |
| !! | GCTATTTTAAAGGGGTCTTT+AGG | - | chr3.1:62570203-62570222 | None:intergenic | 35.0% |
| !! | TAATGTGCTGATTGTGATGT+TGG | + | chr3.1:62569036-62569055 | MS.gene052632:intron | 35.0% |
| !!! | AATGGTTTTGGTCCTTAACT+TGG | + | chr3.1:62570931-62570950 | MS.gene052632:intron | 35.0% |
| !!! | ACTGAGTTTTAGAAGAAGTG+TGG | + | chr3.1:62571646-62571665 | MS.gene052632:CDS | 35.0% |
| !!! | GTTTTAGAAGAAGTGTGGAT+AGG | + | chr3.1:62571651-62571670 | MS.gene052632:CDS | 35.0% |
| AAGAGTCCAATTTGACCAGA+CGG | + | chr3.1:62571871-62571890 | MS.gene052632:CDS | 40.0% | |
| AAGTAGGTACCTATTGAGTG+TGG | + | chr3.1:62571107-62571126 | MS.gene052632:intron | 40.0% | |
| AATTTCAGTGCCACACATCA+TGG | + | chr3.1:62569205-62569224 | MS.gene052632:intron | 40.0% | |
| ACTGAGTAAGCACCAAGTTA+AGG | - | chr3.1:62570946-62570965 | None:intergenic | 40.0% | |
| AGATAAGGGAGTTCACAAGT+AGG | + | chr3.1:62569903-62569922 | MS.gene052632:intron | 40.0% | |
| AGATACGATTACTCTGGCTA+CGG | + | chr3.1:62570320-62570339 | MS.gene052632:intron | 40.0% | |
| ATGTGGTGATTGGGAGATAT+TGG | + | chr3.1:62568982-62569001 | MS.gene052632:intron | 40.0% | |
| ATTTACCTGCAGGAATTGGA+AGG | + | chr3.1:62569178-62569197 | MS.gene052632:intron | 40.0% | |
| CACTTCTTCTGGATTTCTCT+TGG | - | chr3.1:62571949-62571968 | None:intergenic | 40.0% | |
| CACTTGCGTGTTAATCTCAT+TGG | + | chr3.1:62568495-62568514 | MS.gene052632:CDS | 40.0% | |
| CATATTTGGATGTGCATCCT+TGG | - | chr3.1:62569738-62569757 | None:intergenic | 40.0% | |
| CTCCATAGTCCTATACTATC+GGG | + | chr3.1:62570610-62570629 | MS.gene052632:CDS | 40.0% | |
| CTCCCATAAATGCTTTCCAT+GGG | - | chr3.1:62571498-62571517 | None:intergenic | 40.0% | |
| GATAGGGTTAAACAATCCAG+AGG | + | chr3.1:62571668-62571687 | MS.gene052632:CDS | 40.0% | |
| GCATACGTATTATGCTCACT+TGG | - | chr3.1:62570451-62570470 | None:intergenic | 40.0% | |
| GTCTTATCAGTACTTCTTGG+TGG | - | chr3.1:62571794-62571813 | None:intergenic | 40.0% | |
| GTGACATTAGTTGAGCTCAA+TGG | + | chr3.1:62569394-62569413 | MS.gene052632:intron | 40.0% | |
| TAAAACCAGCCACACTCAAT+AGG | - | chr3.1:62571119-62571138 | None:intergenic | 40.0% | |
| TAACTTAGTGGGATAAGGCT+TGG | + | chr3.1:62569100-62569119 | MS.gene052632:intron | 40.0% | |
| TAGCAATCCCCTAACTTAGT+GGG | + | chr3.1:62569089-62569108 | MS.gene052632:intron | 40.0% | |
| TCCATAGTCCTATACTATCG+GGG | + | chr3.1:62570611-62570630 | MS.gene052632:CDS | 40.0% | |
| TCCCAACAGATTGACCATAA+AGG | - | chr3.1:62570537-62570556 | None:intergenic | 40.0% | |
| TTCCAATTCCTGCAGGTAAA+TGG | - | chr3.1:62569179-62569198 | None:intergenic | 40.0% | |
| TTGTTGCTGTCAGCATGTAA+TGG | + | chr3.1:62570887-62570906 | MS.gene052632:intron | 40.0% | |
| ! | AACCAGTATGTCCTTTTCAC+GGG | - | chr3.1:62570652-62570671 | None:intergenic | 40.0% |
| ! | AAGCCTTATCCCACTAAGTT+AGG | - | chr3.1:62569101-62569120 | None:intergenic | 40.0% |
| ! | AGCCTTATCCCACTAAGTTA+GGG | - | chr3.1:62569100-62569119 | None:intergenic | 40.0% |
| ! | AGTTTGTATGAAGGTGGGTT+TGG | - | chr3.1:62568267-62568286 | None:intergenic | 40.0% |
| ! | ATCTCAATTCCACGTCGATT+AGG | - | chr3.1:62568366-62568385 | None:intergenic | 40.0% |
| ! | CTAAAACTCAGTCTTTGGGA+TGG | - | chr3.1:62571638-62571657 | None:intergenic | 40.0% |
| ! | CTGAGATGTCTAAGGTATTC+TGG | - | chr3.1:62571587-62571606 | None:intergenic | 40.0% |
| ! | GTATGTTTGGATGAGGGTTT+TGG | - | chr3.1:62570180-62570199 | None:intergenic | 40.0% |
| ! | TATGCTTGGGAGTTGAGTTT+TGG | + | chr3.1:62569982-62570001 | MS.gene052632:intron | 40.0% |
| !! | CAGAGGAAGTACTGATTGTT+CGG | + | chr3.1:62571685-62571704 | MS.gene052632:CDS | 40.0% |
| !! | CTCCCATGGAAAGCATTTAT+GGG | + | chr3.1:62571493-62571512 | MS.gene052632:CDS | 40.0% |
| !! | CTTTAGGGTATGTTTGGATG+AGG | - | chr3.1:62570187-62570206 | None:intergenic | 40.0% |
| !! | GCAAGCCAGCTATTTTAAAG+GGG | - | chr3.1:62570211-62570230 | None:intergenic | 40.0% |
| !! | GGCACTTTTTAGCGTTAGTT+TGG | - | chr3.1:62571310-62571329 | None:intergenic | 40.0% |
| !!! | TTGGGAGTTGAGTTTTGGAT+GGG | + | chr3.1:62569987-62570006 | MS.gene052632:intron | 40.0% |
| ACAACTGTGCTGTACTCTCA+TGG | + | chr3.1:62568420-62568439 | MS.gene052632:CDS | 45.0% | |
| ACCCCGATAGTATAGGACTA+TGG | - | chr3.1:62570615-62570634 | None:intergenic | 45.0% | |
| ACTCTCAACCCCGATAGTAT+AGG | - | chr3.1:62570622-62570641 | None:intergenic | 45.0% | |
| AGAAAAGGAGCCATGATGTG+TGG | - | chr3.1:62569218-62569237 | None:intergenic | 45.0% | |
| AGGTGAGGATCTAACGAGTA+CGG | - | chr3.1:62569943-62569962 | None:intergenic | 45.0% | |
| ATGTAACCGCTCACAAAGCA+AGG | - | chr3.1:62569604-62569623 | None:intergenic | 45.0% | |
| ATGTTCAGTTTGAGAGACCG+CGG | + | chr3.1:62571972-62571991 | MS.gene052632:CDS | 45.0% | |
| CATGGAAATGCTGCTGACAT+TGG | + | chr3.1:62568438-62568457 | MS.gene052632:CDS | 45.0% | |
| CGAACAATCAGTACTTCCTC+TGG | - | chr3.1:62571687-62571706 | None:intergenic | 45.0% | |
| CTAGCAATCCCCTAACTTAG+TGG | + | chr3.1:62569088-62569107 | MS.gene052632:intron | 45.0% | |
| CTGAACATCGACACTTCTTC+TGG | - | chr3.1:62571960-62571979 | None:intergenic | 45.0% | |
| CTGATTGTTCGGAAAAGCCA+AGG | + | chr3.1:62571696-62571715 | MS.gene052632:CDS | 45.0% | |
| GAGCCTTTATGGCTCAAAGA+TGG | + | chr3.1:62571536-62571555 | MS.gene052632:CDS | 45.0% | |
| GCAATCAACAACCTCATCAG+CGG | - | chr3.1:62571474-62571493 | None:intergenic | 45.0% | |
| GCATGCAGATACGATTACTC+TGG | + | chr3.1:62570314-62570333 | MS.gene052632:intron | 45.0% | |
| GCCTTATCCCACTAAGTTAG+GGG | - | chr3.1:62569099-62569118 | None:intergenic | 45.0% | |
| GCTCCCATAAATGCTTTCCA+TGG | - | chr3.1:62571499-62571518 | None:intergenic | 45.0% | |
| TATGGTCAATCTGTTGGGAG+TGG | + | chr3.1:62570538-62570557 | MS.gene052632:CDS | 45.0% | |
| TCCCCTAACTTAGTGGGATA+AGG | + | chr3.1:62569095-62569114 | MS.gene052632:intron | 45.0% | |
| TGAAACCTTCCAATTCCTGC+AGG | - | chr3.1:62569186-62569205 | None:intergenic | 45.0% | |
| TGAAATGGCCATTTACCTGC+AGG | + | chr3.1:62569168-62569187 | MS.gene052632:intron | 45.0% | |
| ! | ACCAGTATGTCCTTTTCACG+GGG | - | chr3.1:62570651-62570670 | None:intergenic | 45.0% |
| ! | ACTTCAACGTTTTCACGGTG+TGG | - | chr3.1:62568333-62568352 | None:intergenic | 45.0% |
| ! | AGAGAACTATGGTGCTAAGC+AGG | + | chr3.1:62570501-62570520 | MS.gene052632:CDS | 45.0% |
| ! | CAGGAAGTGCATATGGTTCA+TGG | + | chr3.1:62569433-62569452 | MS.gene052632:intron | 45.0% |
| ! | CTTCAACGTTTTCACGGTGT+GGG | - | chr3.1:62568332-62568351 | None:intergenic | 45.0% |
| ! | TTGCTGATCTTTGTGCTGCT+AGG | + | chr3.1:62569495-62569514 | MS.gene052632:intron | 45.0% |
| ! | TTGTATGAAGGTGGGTTTGG+TGG | - | chr3.1:62568264-62568283 | None:intergenic | 45.0% |
| !! | AGCACAGTTGTTTTCGCCAT+TGG | - | chr3.1:62568411-62568430 | None:intergenic | 45.0% |
| !! | AGGGGTCTTTAGGGTATGTT+TGG | - | chr3.1:62570193-62570212 | None:intergenic | 45.0% |
| !! | CAGAGGAAGTACTGATTGCT+CGG | + | chr3.1:62571733-62571752 | MS.gene052632:CDS | 45.0% |
| !! | GCTCCCATGGAAAGCATTTA+TGG | + | chr3.1:62571492-62571511 | MS.gene052632:CDS | 45.0% |
| !! | TGTTTGGATGAGGGTTTTGG+AGG | - | chr3.1:62570177-62570196 | None:intergenic | 45.0% |
| !!! | CTTGGGAGTTGAGTTTTGGA+TGG | + | chr3.1:62569986-62570005 | MS.gene052632:intron | 45.0% |
| !!! | GAGTTGAGTTTTGGATGGGA+GGG | + | chr3.1:62569991-62570010 | MS.gene052632:intron | 45.0% |
| !!! | GTTTGGATGAGGGTTTTGGA+GGG | - | chr3.1:62570176-62570195 | None:intergenic | 45.0% |
| !!! | TTTGGATGAGGGTTTTGGAG+GGG | - | chr3.1:62570175-62570194 | None:intergenic | 45.0% |
| !!! | TATTTTAATTTTAATTTTTG+TGG | + | chr3.1:62568856-62568875 | MS.gene052632:intron | 5.0% |
| ACCCCGTGAAAAGGACATAC+TGG | + | chr3.1:62570647-62570666 | MS.gene052632:CDS | 50.0% | |
| AGGTACCTATTGAGTGTGGC+TGG | + | chr3.1:62571111-62571130 | MS.gene052632:intron | 50.0% | |
| CGAGCAGCAAGATCCAAAGT+AGG | - | chr3.1:62570565-62570584 | None:intergenic | 50.0% | |
| CTGATTGCTCGGAAAAGCCA+AGG | + | chr3.1:62571744-62571763 | MS.gene052632:CDS | 50.0% | |
| CTGTGATCTGTGCTCTTCCT+TGG | - | chr3.1:62571716-62571735 | None:intergenic | 50.0% | |
| GAGTGATGTACCCCGTGAAA+AGG | + | chr3.1:62570638-62570657 | MS.gene052632:CDS | 50.0% | |
| GGCCATTTACCTGCAGGAAT+TGG | + | chr3.1:62569174-62569193 | MS.gene052632:intron | 50.0% | |
| GTGGGATAAGGCTTGGATGT+TGG | + | chr3.1:62569107-62569126 | MS.gene052632:intron | 50.0% | |
| TCCAATTTGACCAGACGGAG+CGG | + | chr3.1:62571876-62571895 | MS.gene052632:CDS | 50.0% | |
| TGTTGGGAGTGGTCCTACTT+TGG | + | chr3.1:62570549-62570568 | MS.gene052632:CDS | 50.0% | |
| ! | ACGTTTTCACGGTGTGGGAA+TGG | - | chr3.1:62568327-62568346 | None:intergenic | 50.0% |
| ! | AGCACTGGACACTTCACCAA+TGG | - | chr3.1:62570792-62570811 | None:intergenic | 50.0% |
| ! | AGGAAGAGCACAGATCACAG+AGG | + | chr3.1:62571716-62571735 | MS.gene052632:CDS | 50.0% |
| ! | CGTTCTGCAGGAAGTGCATA+TGG | + | chr3.1:62569426-62569445 | MS.gene052632:intron | 50.0% |
| ! | GAGGTTGTTGATTGCTCCCA+TGG | + | chr3.1:62571479-62571498 | MS.gene052632:CDS | 50.0% |
| !! | GAGTTGAGTTGACTCAGTCC+TGG | + | chr3.1:62568645-62568664 | MS.gene052632:intron | 50.0% |
| !!! | AGTTTTGGATGGGAGGGCTT+TGG | + | chr3.1:62569997-62570016 | MS.gene052632:intron | 50.0% |
| !!! | GGAGTTGAGTTTTGGATGGG+AGG | + | chr3.1:62569990-62570009 | MS.gene052632:intron | 50.0% |
| ACCGCTCCGTCTGGTCAAAT+TGG | - | chr3.1:62571880-62571899 | None:intergenic | 55.0% | |
| AGAACAACAGCCCTCAGTCG+GGG | - | chr3.1:62570592-62570611 | None:intergenic | 55.0% | |
| GAGAACAACAGCCCTCAGTC+GGG | - | chr3.1:62570593-62570612 | None:intergenic | 55.0% | |
| GGAGAACAACAGCCCTCAGT+CGG | - | chr3.1:62570594-62570613 | None:intergenic | 55.0% | |
| GGGAGGAGTGACGTCATCAA+TGG | + | chr3.1:62568218-62568237 | MS.gene052632:CDS | 55.0% | |
| TCTTCAGGGAACCGCTGATG+AGG | + | chr3.1:62571460-62571479 | MS.gene052632:intron | 55.0% | |
| TGCTCGATTACCCCGACTGA+GGG | + | chr3.1:62570579-62570598 | MS.gene052632:CDS | 55.0% | |
| TTCTTCTTGACCGCTCCGTC+TGG | - | chr3.1:62571889-62571908 | None:intergenic | 55.0% | |
| ! | TGGCGCGTTTTTCGTTCTGC+AGG | + | chr3.1:62569414-62569433 | MS.gene052632:intron | 55.0% |
| ! | TTTGGATGGGAGGGCTTTGG+AGG | + | chr3.1:62570000-62570019 | MS.gene052632:intron | 55.0% |
| !! | TTGGATGGGAGGGCTTTGGA+GGG | + | chr3.1:62570001-62570020 | MS.gene052632:intron | 55.0% |
| !!! | ATGAGGGTTTTGGAGGGGAG+GGG | - | chr3.1:62570170-62570189 | None:intergenic | 55.0% |
| !!! | GATGAGGGTTTTGGAGGGGA+GGG | - | chr3.1:62570171-62570190 | None:intergenic | 55.0% |
| AGCCAGTCGATGCTCTTCCG+CGG | - | chr3.1:62571992-62572011 | None:intergenic | 60.0% | |
| CTACGGACAGTCGTCAGGGA+AGG | + | chr3.1:62570337-62570356 | MS.gene052632:CDS | 60.0% | |
| CTGCTCGATTACCCCGACTG+AGG | + | chr3.1:62570578-62570597 | MS.gene052632:CDS | 60.0% | |
| CTGGCTACGGACAGTCGTCA+GGG | + | chr3.1:62570333-62570352 | MS.gene052632:CDS | 60.0% | |
| TCTGGCTACGGACAGTCGTC+AGG | + | chr3.1:62570332-62570351 | MS.gene052632:CDS | 60.0% | |
| !!! | GGATGAGGGTTTTGGAGGGG+AGG | - | chr3.1:62570172-62570191 | None:intergenic | 60.0% |
| !! | GACCGCGGAAGAGCATCGAC+TGG | + | chr3.1:62571987-62572006 | MS.gene052632:CDS | 65.0% |
| !! | GCGGAAGAGCATCGACTGGC+TGG | + | chr3.1:62571991-62572010 | MS.gene052632:CDS | 65.0% |
| !!! | AGGGTTTTGGAGGGGAGGGG+AGG | - | chr3.1:62570167-62570186 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 62568216 | 62572033 | 62568216 | ID=MS.gene052632 |
| chr3.1 | mRNA | 62568216 | 62572033 | 62568216 | ID=MS.gene052632.t1;Parent=MS.gene052632 |
| chr3.1 | exon | 62568216 | 62568517 | 62568216 | ID=MS.gene052632.t1.exon1;Parent=MS.gene052632.t1 |
| chr3.1 | CDS | 62568216 | 62568517 | 62568216 | ID=cds.MS.gene052632.t1;Parent=MS.gene052632.t1 |
| chr3.1 | exon | 62570322 | 62570358 | 62570322 | ID=MS.gene052632.t1.exon2;Parent=MS.gene052632.t1 |
| chr3.1 | CDS | 62570322 | 62570358 | 62570322 | ID=cds.MS.gene052632.t1;Parent=MS.gene052632.t1 |
| chr3.1 | exon | 62570448 | 62570684 | 62570448 | ID=MS.gene052632.t1.exon3;Parent=MS.gene052632.t1 |
| chr3.1 | CDS | 62570448 | 62570684 | 62570448 | ID=cds.MS.gene052632.t1;Parent=MS.gene052632.t1 |
| chr3.1 | exon | 62570774 | 62570821 | 62570774 | ID=MS.gene052632.t1.exon4;Parent=MS.gene052632.t1 |
| chr3.1 | CDS | 62570774 | 62570821 | 62570774 | ID=cds.MS.gene052632.t1;Parent=MS.gene052632.t1 |
| chr3.1 | exon | 62571467 | 62572033 | 62571467 | ID=MS.gene052632.t1.exon5;Parent=MS.gene052632.t1 |
| chr3.1 | CDS | 62571467 | 62572033 | 62571467 | ID=cds.MS.gene052632.t1;Parent=MS.gene052632.t1 |
| Gene Sequence |
| Protein sequence |
