Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30148.t1 | XP_003600054.1 | 99.6 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 3.50E-139 | 504.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30148.t1 | Q5M759 | 84.0 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 2.8e-121 | 436.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30148.t1 | G7IXK4 | 99.6 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 2.5e-139 | 504.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene30148 | 0.808982 | 2.37E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene30148 | 0.81056 | 1.08E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene30148 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene30148 | 0.804825 | 1.79E-49 | -1.69E-46 |
| MS.gene056539 | MS.gene30148 | 0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene30148 | 0.819904 | 9.09E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene30148 | -0.816228 | 6.16E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30148 | MS.gene77803 | PPI |
| MS.gene30148 | MS.gene59808 | PPI |
| MS.gene30148 | MS.gene016363 | PPI |
| MS.gene30148 | MS.gene028008 | PPI |
| MS.gene30148 | MS.gene94059 | PPI |
| MS.gene30148 | MS.gene72906 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30148.t1 | MTR_3g051210 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 514 |
| MS.gene30148.t1 | MTR_7g033650 | 97.610 | 251 | 6 | 0 | 1 | 251 | 1 | 251 | 0.0 | 502 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30148.t1 | AT4G27040 | 84.000 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 6.82e-161 | 446 |
| MS.gene30148.t1 | AT4G27040 | 84.000 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 6.82e-161 | 446 |
| MS.gene30148.t1 | AT4G27040 | 84.000 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 6.82e-161 | 446 |
| MS.gene30148.t1 | AT4G27040 | 84.000 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 6.82e-161 | 446 |
| MS.gene30148.t1 | AT4G27040 | 84.000 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 6.82e-161 | 446 |
| MS.gene30148.t1 | AT4G27040 | 84.000 | 250 | 40 | 0 | 1 | 250 | 1 | 250 | 6.82e-161 | 446 |
Find 57 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGATCAATACAAGAAAT+TGG | 0.228131 | 3.3:+42600405 | MS.gene30148:CDS |
| TGGCATCGAATAAGGGGTTT+TGG | 0.249465 | 3.3:+42603307 | MS.gene30148:CDS |
| AGATCCATTGGCATCGAATA+AGG | 0.254143 | 3.3:+42603299 | MS.gene30148:CDS |
| GTTTGTAACCCTCCAATTCC+AGG | 0.370349 | 3.3:-42600370 | None:intergenic |
| ATGAGAAGAAGACCTGGAAT+TGG | 0.376592 | 3.3:+42600358 | MS.gene30148:CDS |
| GATCCATTGGCATCGAATAA+GGG | 0.394041 | 3.3:+42603300 | MS.gene30148:CDS |
| AATTCCTGTCAAAGACGAAA+TGG | 0.400844 | 3.3:-42605466 | None:intergenic |
| AGGCGACTATCTTGGACTTC+GGG | 0.406354 | 3.3:+42605215 | MS.gene30148:CDS |
| TGGGCAGAGCTATTGGGAAT+TGG | 0.413008 | 3.3:+42603327 | MS.gene30148:CDS |
| ATTCCTGTCAAAGACGAAAT+GGG | 0.437105 | 3.3:-42605465 | None:intergenic |
| AAGTAGAAAGGCGACTATCT+TGG | 0.441336 | 3.3:+42605207 | MS.gene30148:CDS |
| AAGGCGACTATCTTGGACTT+CGG | 0.444993 | 3.3:+42605214 | MS.gene30148:CDS |
| TGGTCTTTGTTCAGCTCAGT+TGG | 0.452013 | 3.3:-42603965 | None:intergenic |
| TCACAAATATTTCAGGTTCT+CGG | 0.456872 | 3.3:+42603890 | MS.gene30148:intron |
| TAATGTATCAAGTGCATCAA+TGG | 0.476110 | 3.3:-42605243 | None:intergenic |
| TATTTCAGGTTCTCGGTAGC+GGG | 0.477130 | 3.3:+42603897 | MS.gene30148:intron |
| TCAAATTGTGGACATTTGCT+TGG | 0.478737 | 3.3:+42603557 | MS.gene30148:CDS |
| AGGGATCAATACAAGAAATT+GGG | 0.488849 | 3.3:+42600406 | MS.gene30148:CDS |
| ATATTTCAGGTTCTCGGTAG+CGG | 0.490149 | 3.3:+42603896 | MS.gene30148:intron |
| TTCAAGCTGAGAACGAAAAG+TGG | 0.490188 | 3.3:-42600476 | None:intergenic |
| GGTGATTTCTATTATGAACT+TGG | 0.493886 | 3.3:+42603348 | MS.gene30148:CDS |
| AAGACGGAAAACGACGGTAC+TGG | 0.495847 | 3.3:+42605427 | MS.gene30148:CDS |
| CATGAAATGTGTGCTAAAGT+TGG | 0.508866 | 3.3:+42603273 | MS.gene30148:CDS |
| AGAAGAAGACCTGGAATTGG+AGG | 0.513896 | 3.3:+42600361 | MS.gene30148:CDS |
| ATTGATCAGTCCACCGTTGA+GGG | 0.514533 | 3.3:-42603589 | None:intergenic |
| TGAAATTGTGATCTGAATGC+AGG | 0.522805 | 3.3:-42603252 | None:intergenic |
| TGAAATTCTTGAACTTGCCC+AGG | 0.525315 | 3.3:+42603991 | MS.gene30148:CDS |
| GGGTTTGAAGTTATTTCTGT+TGG | 0.525591 | 3.3:+42603917 | MS.gene30148:CDS |
| GATCAGAACTGATATGATGA+AGG | 0.529766 | 3.3:+42600444 | MS.gene30148:CDS |
| CTTGGTTTACTTCAGGGTCA+AGG | 0.537128 | 3.3:+42605167 | MS.gene30148:intron |
| AGCACGCAGGCAATCATCCT+CGG | 0.550043 | 3.3:-42603670 | None:intergenic |
| ATTGATGATGGCCACAAAGA+CGG | 0.551263 | 3.3:+42605411 | MS.gene30148:CDS |
| ATCCATTGGCATCGAATAAG+GGG | 0.567315 | 3.3:+42603301 | MS.gene30148:CDS |
| TACAAACAGCTGCAGCAGCA+AGG | 0.571240 | 3.3:+42600386 | MS.gene30148:CDS |
| TTCAAAATGAGAAGAAGACC+TGG | 0.576930 | 3.3:+42600352 | None:intergenic |
| TGACTGTCAATGAAGTAGAA+AGG | 0.578426 | 3.3:+42605195 | MS.gene30148:CDS |
| ACAAACAGCTGCAGCAGCAA+GGG | 0.585992 | 3.3:+42600387 | MS.gene30148:CDS |
| TTCCTGTCAAAGACGAAATG+GGG | 0.586176 | 3.3:-42605464 | None:intergenic |
| GCGTGCTATCAGTAAGCTGA+AGG | 0.586793 | 3.3:+42603686 | MS.gene30148:CDS |
| GATTGATCAGTCCACCGTTG+AGG | 0.590719 | 3.3:-42603590 | None:intergenic |
| TAAAGTTGGAGTAGATCCAT+TGG | 0.590906 | 3.3:+42603287 | MS.gene30148:CDS |
| AACCCCTTATTCGATGCCAA+TGG | 0.602728 | 3.3:-42603303 | None:intergenic |
| GGACTTGCAATGATTGATGA+TGG | 0.603574 | 3.3:+42605399 | MS.gene30148:CDS |
| TATCAAGTGCATCAATGGCA+CGG | 0.623758 | 3.3:-42605238 | None:intergenic |
| TCAGCTCAGTTGGAACCGAA+CGG | 0.627094 | 3.3:-42603955 | None:intergenic |
| GAAATTGTGATCTGAATGCA+GGG | 0.640591 | 3.3:-42603251 | None:intergenic |
| TTGATCAGTCCACCGTTGAG+GGG | 0.647144 | 3.3:-42603588 | None:intergenic |
| CAAGTTCAAGAATTTCATTG+TGG | 0.649563 | 3.3:-42603985 | None:intergenic |
| CTAGACAGGAGTTCAAATTG+TGG | 0.654031 | 3.3:+42603545 | MS.gene30148:intron |
| GAAGAAGACCTGGAATTGGA+GGG | 0.656202 | 3.3:+42600362 | MS.gene30148:CDS |
| TCCTGTCAAAGACGAAATGG+GGG | 0.657833 | 3.3:-42605463 | None:intergenic |
| TGACCGTGGAGTTGTTTCCG+AGG | 0.667979 | 3.3:+42603653 | MS.gene30148:CDS |
| GCTACTAGACCCCTCAACGG+TGG | 0.670205 | 3.3:+42603579 | MS.gene30148:CDS |
| GCCACAAAGACGGAAAACGA+CGG | 0.674550 | 3.3:+42605421 | MS.gene30148:CDS |
| TTGGCTACTAGACCCCTCAA+CGG | 0.700160 | 3.3:+42603576 | MS.gene30148:CDS |
| CATCCTCGGAAACAACTCCA+CGG | 0.702872 | 3.3:-42603656 | None:intergenic |
| TCAGCTTACTGATAGCACGC+AGG | 0.720093 | 3.3:-42603683 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAATAAAAAATG+GGG | - | chr3.3:42600541-42600560 | None:intergenic | 10.0% |
| !! | CACAAAAAAAAAATAAAAAA+TGG | - | chr3.3:42600543-42600562 | None:intergenic | 10.0% |
| !! | GATTAATAAAAAATAAAATC+TGG | - | chr3.3:42603457-42603476 | None:intergenic | 10.0% |
| !! | TTTCAAAAAAAAAAAATTTG+AGG | + | chr3.3:42602437-42602456 | MS.gene30148:intron | 10.0% |
| !!! | CTTTATTTTATTTTTTGTTA+TGG | + | chr3.3:42604366-42604385 | MS.gene30148:intron | 10.0% |
| !! | AAACAGAATGAATTATAATA+TGG | + | chr3.3:42601454-42601473 | MS.gene30148:intron | 15.0% |
| !! | AAATAGTAATAGTCAAAAAT+TGG | - | chr3.3:42603737-42603756 | None:intergenic | 15.0% |
| !! | ATAAAAAATAAAATCTGGAA+TGG | - | chr3.3:42603452-42603471 | None:intergenic | 15.0% |
| !!! | AAAAATTTGATTTTGAATTC+TGG | + | chr3.3:42600582-42600601 | MS.gene30148:intron | 15.0% |
| !!! | AAAATTTGATTTTGAATTCT+GGG | + | chr3.3:42600583-42600602 | MS.gene30148:intron | 15.0% |
| !!! | ATTTTTTTTTTGTGATTGAT+TGG | + | chr3.3:42600549-42600568 | MS.gene30148:intron | 15.0% |
| !!! | TTTATTTTTTGTTATGGAAA+TGG | + | chr3.3:42604372-42604391 | MS.gene30148:intron | 15.0% |
| !!! | TTTTTGACTATTACTATTTA+TGG | + | chr3.3:42603738-42603757 | MS.gene30148:intron | 15.0% |
| !! | ATATATGTAATTTAGGCTTA+AGG | + | chr3.3:42600902-42600921 | MS.gene30148:intron | 20.0% |
| !! | CTAATCATTAATTGCAAAAA+AGG | - | chr3.3:42603178-42603197 | None:intergenic | 20.0% |
| !! | CTGAAATTCATCAAATAATT+AGG | + | chr3.3:42604700-42604719 | MS.gene30148:intron | 20.0% |
| !! | TAACAATCTACACATAAAAA+AGG | - | chr3.3:42604577-42604596 | None:intergenic | 20.0% |
| !! | TACAAATTATTGTCAAATAG+CGG | - | chr3.3:42602555-42602574 | None:intergenic | 20.0% |
| !! | TAGATCAAACAGTATAATTA+TGG | + | chr3.3:42604179-42604198 | MS.gene30148:intron | 20.0% |
| !! | TATATGTAATTTAGGCTTAA+GGG | + | chr3.3:42600903-42600922 | MS.gene30148:intron | 20.0% |
| !! | TATTACATGTTATCAGAAAA+AGG | - | chr3.3:42605322-42605341 | None:intergenic | 20.0% |
| !! | TTTAAAGAAAATTCCCAATA+TGG | - | chr3.3:42602056-42602075 | None:intergenic | 20.0% |
| !!! | AATAGTCAAAAATTGGTTTA+AGG | - | chr3.3:42603730-42603749 | None:intergenic | 20.0% |
| !!! | AGTATAGATTTTAATTTCTG+TGG | + | chr3.3:42601749-42601768 | MS.gene30148:intron | 20.0% |
| !!! | ATAGTCAAAAATTGGTTTAA+GGG | - | chr3.3:42603729-42603748 | None:intergenic | 20.0% |
| !!! | ATGTTAATAAGAGTTTGTTA+TGG | + | chr3.3:42600874-42600893 | MS.gene30148:intron | 20.0% |
| !!! | TAAAATAAAATGAAAGCACA+AGG | - | chr3.3:42602400-42602419 | None:intergenic | 20.0% |
| !!! | TTTTTTATACTTATAGCTCT+TGG | + | chr3.3:42605149-42605168 | MS.gene30148:intron | 20.0% |
| ! | AAAGATAACATCAACAAACT+AGG | - | chr3.3:42604471-42604490 | None:intergenic | 25.0% |
| ! | AAGAGTGAAATTAAACATCT+CGG | - | chr3.3:42603484-42603503 | None:intergenic | 25.0% |
| ! | AAGATTTATTACATGCATTC+TGG | + | chr3.3:42603839-42603858 | MS.gene30148:intron | 25.0% |
| ! | ACTATTACTATTTATGGATG+TGG | + | chr3.3:42603744-42603763 | MS.gene30148:intron | 25.0% |
| ! | ATAAGCTGAAAACAACTTAT+AGG | - | chr3.3:42604284-42604303 | None:intergenic | 25.0% |
| ! | ATAATTATGGTATAGACCTA+GGG | + | chr3.3:42604192-42604211 | MS.gene30148:intron | 25.0% |
| ! | ATATGTAATTTAGGCTTAAG+GGG | + | chr3.3:42600904-42600923 | MS.gene30148:intron | 25.0% |
| ! | ATTTCTATTATGAACTTGGT+TGG | + | chr3.3:42603352-42603371 | MS.gene30148:intron | 25.0% |
| ! | GGTGGAAATATATGTAATTT+AGG | + | chr3.3:42600895-42600914 | MS.gene30148:intron | 25.0% |
| ! | GTAATAAATCTTTCAGTATG+AGG | - | chr3.3:42603831-42603850 | None:intergenic | 25.0% |
| ! | TATAATTATGGTATAGACCT+AGG | + | chr3.3:42604191-42604210 | MS.gene30148:intron | 25.0% |
| ! | TCCAGATGTATTTATAACTA+GGG | - | chr3.3:42602790-42602809 | None:intergenic | 25.0% |
| ! | TGAATTATAATATGGATCAG+TGG | + | chr3.3:42601462-42601481 | MS.gene30148:intron | 25.0% |
| ! | TGATTGCTAATTGATGAAAT+CGG | + | chr3.3:42603005-42603024 | MS.gene30148:intron | 25.0% |
| !! | AAAGATAATCTCTTTAAGAG+AGG | + | chr3.3:42601090-42601109 | MS.gene30148:intron | 25.0% |
| !! | ATTTCACTCTTTTCTTAGAA+TGG | + | chr3.3:42603493-42603512 | MS.gene30148:intron | 25.0% |
| !! | ATTTGTTCTTATCCTTTTTG+AGG | + | chr3.3:42601965-42601984 | MS.gene30148:intron | 25.0% |
| !! | GTTATCATTTATTTGTTGAG+AGG | + | chr3.3:42602237-42602256 | MS.gene30148:intron | 25.0% |
| !! | TGTGTGCTTTTATATACTAT+TGG | + | chr3.3:42604943-42604962 | MS.gene30148:intron | 25.0% |
| !!! | GGGAATTTTCTTTAAAATTG+TGG | + | chr3.3:42602060-42602079 | MS.gene30148:intron | 25.0% |
| !!! | GTTGTTTTCATAAATTATCC+TGG | - | chr3.3:42604320-42604339 | None:intergenic | 25.0% |
| !!! | TGGTTGGTTTCATTTATTTA+AGG | + | chr3.3:42604217-42604236 | MS.gene30148:intron | 25.0% |
| !!! | TTAATAAGAGTTTGTTATGG+TGG | + | chr3.3:42600877-42600896 | MS.gene30148:intron | 25.0% |
| AAAGAAAAAACTTGTCCGTT+CGG | + | chr3.3:42603940-42603959 | MS.gene30148:CDS | 30.0% | |
| AAATCGGTATAATGTTTGAG+AGG | + | chr3.3:42603021-42603040 | MS.gene30148:intron | 30.0% | |
| AAATTCAAATGTGGTTGGAT+TGG | + | chr3.3:42600716-42600735 | MS.gene30148:intron | 30.0% | |
| AACTATTACACTTGCATCTT+AGG | - | chr3.3:42601943-42601962 | None:intergenic | 30.0% | |
| AAGATATGAGCATTCAGTAA+AGG | + | chr3.3:42600936-42600955 | MS.gene30148:intron | 30.0% | |
| AAGGAACATGTAAATATCTG+TGG | + | chr3.3:42604547-42604566 | MS.gene30148:intron | 30.0% | |
| AAGGGATCAATACAAGAAAT+TGG | + | chr3.3:42600405-42600424 | MS.gene30148:CDS | 30.0% | |
| AATCCAACCACATTTGAATT+TGG | - | chr3.3:42600717-42600736 | None:intergenic | 30.0% | |
| AATTCAAATGTGGTTGGATT+GGG | + | chr3.3:42600717-42600736 | MS.gene30148:intron | 30.0% | |
| ACTTCATCTTTAGTGTATCA+AGG | + | chr3.3:42604528-42604547 | MS.gene30148:intron | 30.0% | |
| AGAGTGAAATTAAACATCTC+GGG | - | chr3.3:42603483-42603502 | None:intergenic | 30.0% | |
| AGGGATCAATACAAGAAATT+GGG | + | chr3.3:42600406-42600425 | MS.gene30148:CDS | 30.0% | |
| ATCCAACCACATTTGAATTT+GGG | - | chr3.3:42600716-42600735 | None:intergenic | 30.0% | |
| ATGTATTTATAACTAGGGCA+TGG | - | chr3.3:42602785-42602804 | None:intergenic | 30.0% | |
| ATGTGCTACATCTTAAATTC+GGG | - | chr3.3:42602756-42602775 | None:intergenic | 30.0% | |
| ATTATGAACTTTCTTGAGCA+TGG | + | chr3.3:42604105-42604124 | MS.gene30148:intron | 30.0% | |
| CAAGTTCAAGAATTTCATTG+TGG | - | chr3.3:42603988-42604007 | None:intergenic | 30.0% | |
| CATGTGCTACATCTTAAATT+CGG | - | chr3.3:42602757-42602776 | None:intergenic | 30.0% | |
| CTGACATATCATAAACCAAA+CGG | + | chr3.3:42604247-42604266 | MS.gene30148:intron | 30.0% | |
| GATGCGATATTAAGAAGTAA+GGG | - | chr3.3:42604730-42604749 | None:intergenic | 30.0% | |
| GATTAAATAGCGCTAATTGT+TGG | + | chr3.3:42603197-42603216 | MS.gene30148:intron | 30.0% | |
| GATTGGGAATAAGAAATTTG+AGG | + | chr3.3:42600733-42600752 | MS.gene30148:intron | 30.0% | |
| GGTGATTTCTATTATGAACT+TGG | + | chr3.3:42603348-42603367 | MS.gene30148:CDS | 30.0% | |
| GTCCAGATGTATTTATAACT+AGG | - | chr3.3:42602791-42602810 | None:intergenic | 30.0% | |
| GTGTTTAACAATTGCAACTA+TGG | - | chr3.3:42603409-42603428 | None:intergenic | 30.0% | |
| TAATGTATCAAGTGCATCAA+TGG | - | chr3.3:42605246-42605265 | None:intergenic | 30.0% | |
| TAGATCAGTATATCCAAACA+AGG | - | chr3.3:42604031-42604050 | None:intergenic | 30.0% | |
| TATCCACATCATACAATTAC+AGG | - | chr3.3:42604131-42604150 | None:intergenic | 30.0% | |
| TATGTGTAGATTGTTACTAG+AGG | + | chr3.3:42604581-42604600 | MS.gene30148:intron | 30.0% | |
| TGAACAAAACTCTATTCACA+TGG | - | chr3.3:42603062-42603081 | None:intergenic | 30.0% | |
| TGATGCGATATTAAGAAGTA+AGG | - | chr3.3:42604731-42604750 | None:intergenic | 30.0% | |
| TGATTCTAATCATAACATGC+CGG | + | chr3.3:42602940-42602959 | MS.gene30148:intron | 30.0% | |
| TGCCTTAAAAAATTTCTGTG+CGG | - | chr3.3:42602649-42602668 | None:intergenic | 30.0% | |
| TGGTTGTTCGTAATTATATG+TGG | + | chr3.3:42602001-42602020 | MS.gene30148:intron | 30.0% | |
| TTCAGTATCCATGAAATTTG+AGG | - | chr3.3:42605352-42605371 | None:intergenic | 30.0% | |
| TTTACAGCATACCATAATGA+AGG | + | chr3.3:42601240-42601259 | MS.gene30148:intron | 30.0% | |
| ! | AATGTTAGCCTCAAATTTCA+TGG | + | chr3.3:42605341-42605360 | MS.gene30148:intron | 30.0% |
| ! | ATTCTGACTTGCATGTATTT+CGG | + | chr3.3:42603789-42603808 | MS.gene30148:intron | 30.0% |
| ! | TTGGTTATTTGTGTTGTTGT+TGG | + | chr3.3:42604901-42604920 | MS.gene30148:intron | 30.0% |
| !! | AAGTTTCTTTTCATTGGTTG+CGG | + | chr3.3:42601796-42601815 | MS.gene30148:intron | 30.0% |
| !! | ATTTTGAACTCTCTTGCTAT+TGG | + | chr3.3:42604845-42604864 | MS.gene30148:intron | 30.0% |
| !! | CTGTTGTGTTTGATGATTTT+TGG | + | chr3.3:42600664-42600683 | MS.gene30148:intron | 30.0% |
| !! | GAGGTTAATTTTAGAAGTTG+TGG | + | chr3.3:42602456-42602475 | MS.gene30148:intron | 30.0% |
| !! | TCACAAATATTTCAGGTTCT+CGG | + | chr3.3:42603890-42603909 | MS.gene30148:intron | 30.0% |
| !! | TGATATGTCAATTTTAGCAC+CGG | + | chr3.3:42604986-42605005 | MS.gene30148:intron | 30.0% |
| !! | TTTCTTTAAAATTGTGGACC+TGG | + | chr3.3:42602066-42602085 | MS.gene30148:intron | 30.0% |
| !!! | ATGTGAATAGAGTTTTGTTC+AGG | + | chr3.3:42603061-42603080 | MS.gene30148:intron | 30.0% |
| !!! | TACTATAGGATTTTGGTGTT+AGG | + | chr3.3:42604762-42604781 | MS.gene30148:intron | 30.0% |
| !!! | TGTGAATAGAGTTTTGTTCA+GGG | + | chr3.3:42603062-42603081 | MS.gene30148:intron | 30.0% |
| !!! | TTTGATGATTTTTGGCACTT+GGG | + | chr3.3:42600672-42600691 | MS.gene30148:intron | 30.0% |
| AACCACATTTGAATTTGGGA+AGG | - | chr3.3:42600712-42600731 | None:intergenic | 35.0% | |
| AATATCAGTGTTGTGGGAAA+TGG | + | chr3.3:42602484-42602503 | MS.gene30148:intron | 35.0% | |
| AATATCGCATCACGAAAATC+CGG | + | chr3.3:42604739-42604758 | MS.gene30148:intron | 35.0% | |
| AATTCCTGTCAAAGACGAAA+TGG | - | chr3.3:42605469-42605488 | None:intergenic | 35.0% | |
| AATTGTCAGGAAGAATCTCA+TGG | + | chr3.3:42602103-42602122 | MS.gene30148:intron | 35.0% | |
| ACACCAAAATCCTATAGTAC+CGG | - | chr3.3:42604761-42604780 | None:intergenic | 35.0% | |
| ACATTGCTCTTCTTAGCAAA+TGG | + | chr3.3:42600763-42600782 | MS.gene30148:intron | 35.0% | |
| ACTACTAGAATCAGTCATGA+CGG | - | chr3.3:42602912-42602931 | None:intergenic | 35.0% | |
| AGATTGTTACTAGAGGAAGA+AGG | + | chr3.3:42604588-42604607 | MS.gene30148:intron | 35.0% | |
| AGGCTTCATATCAGTAGTTT+CGG | + | chr3.3:42601708-42601727 | MS.gene30148:intron | 35.0% | |
| AGTCTACTTCGATAATGTCA+AGG | - | chr3.3:42602683-42602702 | None:intergenic | 35.0% | |
| ATAGCTCTTGGTTTACTTCA+GGG | + | chr3.3:42605161-42605180 | MS.gene30148:intron | 35.0% | |
| ATATTTCGACTGATCCTTCA+TGG | + | chr3.3:42600989-42601008 | MS.gene30148:intron | 35.0% | |
| ATCTCATGACTCTTAAAAGC+CGG | - | chr3.3:42604087-42604106 | None:intergenic | 35.0% | |
| ATTCCTGTCAAAGACGAAAT+GGG | - | chr3.3:42605468-42605487 | None:intergenic | 35.0% | |
| ATTGTCAGGAAGAATCTCAT+GGG | + | chr3.3:42602104-42602123 | MS.gene30148:intron | 35.0% | |
| ATTTGAGGACTTGAAACTTC+AGG | + | chr3.3:42603098-42603117 | MS.gene30148:intron | 35.0% | |
| ATTTGATTAGCAAGTGGCTT+GGG | + | chr3.3:42601214-42601233 | MS.gene30148:intron | 35.0% | |
| CAAAAGTTTCGTGTTTGGAT+TGG | + | chr3.3:42601040-42601059 | MS.gene30148:intron | 35.0% | |
| CAAATGGGAGTGGAAAATTA+GGG | + | chr3.3:42600779-42600798 | MS.gene30148:intron | 35.0% | |
| CATGAAAAGATTCCATCTGT+CGG | + | chr3.3:42605076-42605095 | MS.gene30148:intron | 35.0% | |
| CATGAAATGTGTGCTAAAGT+TGG | + | chr3.3:42603273-42603292 | MS.gene30148:CDS | 35.0% | |
| CATTGCTCTTCTTAGCAAAT+GGG | + | chr3.3:42600764-42600783 | MS.gene30148:intron | 35.0% | |
| CTTGGTATTTGATTAGCAAG+TGG | + | chr3.3:42601208-42601227 | MS.gene30148:intron | 35.0% | |
| GAAATTGTGATCTGAATGCA+GGG | - | chr3.3:42603254-42603273 | None:intergenic | 35.0% | |
| GATCAATTTGAAGGACTGAT+TGG | + | chr3.3:42601276-42601295 | MS.gene30148:intron | 35.0% | |
| GATCAGAACTGATATGATGA+AGG | + | chr3.3:42600444-42600463 | MS.gene30148:CDS | 35.0% | |
| GCACACTTAGATCAATTTGA+AGG | + | chr3.3:42601267-42601286 | MS.gene30148:intron | 35.0% | |
| GCCCTAGTTATAAATACATC+TGG | + | chr3.3:42602786-42602805 | MS.gene30148:intron | 35.0% | |
| GCTGAAAATATCAGTGTTGT+GGG | + | chr3.3:42602478-42602497 | MS.gene30148:intron | 35.0% | |
| GTTATTGCATTCTTTGGTCA+GGG | + | chr3.3:42601542-42601561 | MS.gene30148:intron | 35.0% | |
| GTTGTGGTTATTGCATTCTT+TGG | + | chr3.3:42601536-42601555 | MS.gene30148:intron | 35.0% | |
| TAAAGTTGGAGTAGATCCAT+TGG | + | chr3.3:42603287-42603306 | MS.gene30148:CDS | 35.0% | |
| TAGCAGACACAGAGTTTAAT+AGG | + | chr3.3:42602719-42602738 | MS.gene30148:intron | 35.0% | |
| TAGCTTATGAGTTATGAGTG+TGG | + | chr3.3:42604492-42604511 | MS.gene30148:intron | 35.0% | |
| TATAGCTCTTGGTTTACTTC+AGG | + | chr3.3:42605160-42605179 | MS.gene30148:intron | 35.0% | |
| TATTTGATTAGCAAGTGGCT+TGG | + | chr3.3:42601213-42601232 | MS.gene30148:intron | 35.0% | |
| TCAAATTGTGGACATTTGCT+TGG | + | chr3.3:42603557-42603576 | MS.gene30148:CDS | 35.0% | |
| TCACTAACGTGCTATATTGT+GGG | + | chr3.3:42602527-42602546 | MS.gene30148:intron | 35.0% | |
| TCATAGCCAAAACTACATCA+AGG | - | chr3.3:42602974-42602993 | None:intergenic | 35.0% | |
| TCCATCAAAAGTTTCGTGTT+TGG | + | chr3.3:42601035-42601054 | MS.gene30148:intron | 35.0% | |
| TGAAATTGTGATCTGAATGC+AGG | - | chr3.3:42603255-42603274 | None:intergenic | 35.0% | |
| TGACGTGTCACAAATATTTC+AGG | + | chr3.3:42603883-42603902 | MS.gene30148:intron | 35.0% | |
| TGACTGTCAATGAAGTAGAA+AGG | + | chr3.3:42605195-42605214 | MS.gene30148:CDS | 35.0% | |
| TGTGCTACATCTTAAATTCG+GGG | - | chr3.3:42602755-42602774 | None:intergenic | 35.0% | |
| TTCACTAACGTGCTATATTG+TGG | + | chr3.3:42602526-42602545 | MS.gene30148:intron | 35.0% | |
| TTCCCAAATTCAAATGTGGT+TGG | + | chr3.3:42600711-42600730 | MS.gene30148:intron | 35.0% | |
| TTCCTTCCCAAATTCAAATG+TGG | + | chr3.3:42600707-42600726 | MS.gene30148:intron | 35.0% | |
| TTTGAGGACTTGAAACTTCA+GGG | + | chr3.3:42603099-42603118 | MS.gene30148:intron | 35.0% | |
| ! | AATCCGGTACTATAGGATTT+TGG | + | chr3.3:42604755-42604774 | MS.gene30148:intron | 35.0% |
| ! | AATCCTTTTCCCATTAAGTG+GGG | - | chr3.3:42604883-42604902 | None:intergenic | 35.0% |
| ! | AGAGCTTTGGTCAATAGATA+TGG | + | chr3.3:42600825-42600844 | MS.gene30148:intron | 35.0% |
| ! | AGCACTTATTTCTCCTTGTT+TGG | + | chr3.3:42604015-42604034 | MS.gene30148:intron | 35.0% |
| ! | AGCTTTGGTCAATAGATATG+GGG | + | chr3.3:42600827-42600846 | MS.gene30148:intron | 35.0% |
| ! | CAAAAATTGGTTTAAGGGCA+TGG | - | chr3.3:42603724-42603743 | None:intergenic | 35.0% |
| ! | CAATCCTTTTCCCATTAAGT+GGG | - | chr3.3:42604884-42604903 | None:intergenic | 35.0% |
| ! | CGTGACAAGTTTCTTTTCAT+TGG | + | chr3.3:42601790-42601809 | MS.gene30148:intron | 35.0% |
| ! | GAGCTTTGGTCAATAGATAT+GGG | + | chr3.3:42600826-42600845 | MS.gene30148:intron | 35.0% |
| ! | TCCAAACACGAAACTTTTGA+TGG | - | chr3.3:42601039-42601058 | None:intergenic | 35.0% |
| ! | TGATTTTGAATTCTGGGTGT+TGG | + | chr3.3:42600589-42600608 | MS.gene30148:intron | 35.0% |
| ! | TGGATTGGAAGATCCATATT+GGG | + | chr3.3:42602040-42602059 | MS.gene30148:intron | 35.0% |
| ! | TGTCTAAAATACCACAGAGT+GGG | - | chr3.3:42601689-42601708 | None:intergenic | 35.0% |
| !! | ATACTGAACCACTGTTGTTT+TGG | + | chr3.3:42605364-42605383 | MS.gene30148:intron | 35.0% |
| !! | CTTATTTCTATAAGCTGTCC+AGG | + | chr3.3:42604299-42604318 | MS.gene30148:intron | 35.0% |
| !! | GGGTTTGAAGTTATTTCTGT+TGG | + | chr3.3:42603917-42603936 | MS.gene30148:CDS | 35.0% |
| !!! | GATTTTGGTGTTAGGTATAG+AGG | + | chr3.3:42604770-42604789 | MS.gene30148:intron | 35.0% |
| !!! | GTCCGCACAGAAATTTTTTA+AGG | + | chr3.3:42602644-42602663 | MS.gene30148:intron | 35.0% |
| !!! | GTGAATAGAGTTTTGTTCAG+GGG | + | chr3.3:42603063-42603082 | MS.gene30148:intron | 35.0% |
| !!! | GTTTGATGATTTTTGGCACT+TGG | + | chr3.3:42600671-42600690 | MS.gene30148:intron | 35.0% |
| !!! | GTTTTGGCTATGAATGATGT+TGG | + | chr3.3:42602981-42603000 | MS.gene30148:intron | 35.0% |
| AAAATTAGGGAGGCTAGAGA+GGG | + | chr3.3:42600792-42600811 | MS.gene30148:intron | 40.0% | |
| AACAATAGCAAAGACCAAGC+AGG | - | chr3.3:42601887-42601906 | None:intergenic | 40.0% | |
| AAGGAGAAATAAGTGCTACC+TGG | - | chr3.3:42604012-42604031 | None:intergenic | 40.0% | |
| AAGTAGAAAGGCGACTATCT+TGG | + | chr3.3:42605207-42605226 | MS.gene30148:CDS | 40.0% | |
| ACATTCACCAACACACCTTA+TGG | - | chr3.3:42601133-42601152 | None:intergenic | 40.0% | |
| AGCATACCATAATGAAGGTC+TGG | + | chr3.3:42601245-42601264 | MS.gene30148:intron | 40.0% | |
| AGGAGAAATAAGTGCTACCT+GGG | - | chr3.3:42604011-42604030 | None:intergenic | 40.0% | |
| ATGAGAAGAAGACCTGGAAT+TGG | + | chr3.3:42600358-42600377 | MS.gene30148:CDS | 40.0% | |
| CCACTTAATGGGAAAAGGAT+TGG | + | chr3.3:42604882-42604901 | MS.gene30148:intron | 40.0% | |
| CCTTCGAACAAACCTCAAAA+AGG | - | chr3.3:42601980-42601999 | None:intergenic | 40.0% | |
| CTAGACAGGAGTTCAAATTG+TGG | + | chr3.3:42603545-42603564 | MS.gene30148:intron | 40.0% | |
| CTAGCAGTCTTAGTGTGATT+TGG | + | chr3.3:42601316-42601335 | MS.gene30148:intron | 40.0% | |
| CTTCGATAATGTCAAGGTAG+AGG | - | chr3.3:42602677-42602696 | None:intergenic | 40.0% | |
| GAGATGAGTGACAGATTCTT+CGG | - | chr3.3:42601160-42601179 | None:intergenic | 40.0% | |
| GCAAATGGGAGTGGAAAATT+AGG | + | chr3.3:42600778-42600797 | MS.gene30148:intron | 40.0% | |
| GGACTTGCAATGATTGATGA+TGG | + | chr3.3:42605399-42605418 | MS.gene30148:CDS | 40.0% | |
| GGCTGAAAATATCAGTGTTG+TGG | + | chr3.3:42602477-42602496 | MS.gene30148:intron | 40.0% | |
| GGGCTTACTCGAATAATTTG+AGG | + | chr3.3:42603083-42603102 | MS.gene30148:intron | 40.0% | |
| GGGTTTATGGTATAGAGCTT+TGG | + | chr3.3:42600812-42600831 | MS.gene30148:intron | 40.0% | |
| GGTTATTGCATTCTTTGGTC+AGG | + | chr3.3:42601541-42601560 | MS.gene30148:intron | 40.0% | |
| GTAATTTAGGCTTAAGGGGT+GGG | + | chr3.3:42600908-42600927 | MS.gene30148:intron | 40.0% | |
| GTGGAATTGGTTGAGATTCA+AGG | + | chr3.3:42601430-42601449 | MS.gene30148:intron | 40.0% | |
| TAATTTAGGCTTAAGGGGTG+GGG | + | chr3.3:42600909-42600928 | MS.gene30148:intron | 40.0% | |
| TAGGCATATCATAAGCCGTT+TGG | - | chr3.3:42604265-42604284 | None:intergenic | 40.0% | |
| TAGGTATAGAGGCAACACTT+TGG | + | chr3.3:42604781-42604800 | MS.gene30148:intron | 40.0% | |
| TAGTCCTTGGTGGGAATATT+TGG | + | chr3.3:42602147-42602166 | MS.gene30148:intron | 40.0% | |
| TATCAAGTGCATCAATGGCA+CGG | - | chr3.3:42605241-42605260 | None:intergenic | 40.0% | |
| TCACGAAAATCCGGTACTAT+AGG | + | chr3.3:42604748-42604767 | MS.gene30148:intron | 40.0% | |
| TCTAATCATAACATGCCGGT+GGG | + | chr3.3:42602944-42602963 | MS.gene30148:intron | 40.0% | |
| TCTCGCACTATCTGATATAG+CGG | + | chr3.3:42601578-42601597 | MS.gene30148:intron | 40.0% | |
| TGAAATTCTTGAACTTGCCC+AGG | + | chr3.3:42603991-42604010 | MS.gene30148:CDS | 40.0% | |
| TGAAGTGATCGATCAGGTTT+GGG | + | chr3.3:42601608-42601627 | MS.gene30148:intron | 40.0% | |
| TGGCCTGTAATTGTATGATG+TGG | + | chr3.3:42604125-42604144 | MS.gene30148:intron | 40.0% | |
| TGTAATTTAGGCTTAAGGGG+TGG | + | chr3.3:42600907-42600926 | MS.gene30148:intron | 40.0% | |
| TGTGGCTGCAAGATGTTAAT+TGG | + | chr3.3:42601767-42601786 | MS.gene30148:intron | 40.0% | |
| TGTGTTGGATCAGAATTGTC+AGG | + | chr3.3:42602090-42602109 | MS.gene30148:intron | 40.0% | |
| TTAGTTGCTGGTCCATTAGA+AGG | + | chr3.3:42601861-42601880 | MS.gene30148:intron | 40.0% | |
| TTATTGATCAGGGGTCCATA+AGG | + | chr3.3:42601115-42601134 | MS.gene30148:intron | 40.0% | |
| TTCAAGCTGAGAACGAAAAG+TGG | - | chr3.3:42600479-42600498 | None:intergenic | 40.0% | |
| TTCCTGTCAAAGACGAAATG+GGG | - | chr3.3:42605467-42605486 | None:intergenic | 40.0% | |
| TTCTAATCATAACATGCCGG+TGG | + | chr3.3:42602943-42602962 | MS.gene30148:intron | 40.0% | |
| TTGAGGACTTGAAACTTCAG+GGG | + | chr3.3:42603100-42603119 | MS.gene30148:intron | 40.0% | |
| TTGTCAGGAAGAATCTCATG+GGG | + | chr3.3:42602105-42602124 | MS.gene30148:intron | 40.0% | |
| ! | AATATTTGGTGGTTTGGGCA+GGG | + | chr3.3:42602161-42602180 | MS.gene30148:intron | 40.0% |
| ! | AATCTGTAAAGCGTTACTCG+TGG | + | chr3.3:42601411-42601430 | MS.gene30148:intron | 40.0% |
| ! | AGATCCATTGGCATCGAATA+AGG | + | chr3.3:42603299-42603318 | MS.gene30148:CDS | 40.0% |
| ! | AGATTTTGCTCGCAAACACA+AGG | + | chr3.3:42600498-42600517 | MS.gene30148:CDS | 40.0% |
| ! | ATAAGGTGTGTTGGTGAATG+TGG | + | chr3.3:42601132-42601151 | MS.gene30148:intron | 40.0% |
| ! | ATCCATTGGCATCGAATAAG+GGG | + | chr3.3:42603301-42603320 | MS.gene30148:CDS | 40.0% |
| ! | CCAATCCTTTTCCCATTAAG+TGG | - | chr3.3:42604885-42604904 | None:intergenic | 40.0% |
| ! | CTGGATTGGAAGATCCATAT+TGG | + | chr3.3:42602039-42602058 | MS.gene30148:intron | 40.0% |
| ! | CTGTCTAAAATACCACAGAG+TGG | - | chr3.3:42601690-42601709 | None:intergenic | 40.0% |
| ! | CTTGCAAGGTTTACTTGTTG+TGG | + | chr3.3:42601520-42601539 | MS.gene30148:intron | 40.0% |
| ! | GATCCATTGGCATCGAATAA+GGG | + | chr3.3:42603300-42603319 | MS.gene30148:CDS | 40.0% |
| ! | GGATGACCTTGATGTAGTTT+TGG | + | chr3.3:42602965-42602984 | MS.gene30148:intron | 40.0% |
| ! | GGGTGTTGTATAACATCTAC+AGG | + | chr3.3:42601628-42601647 | MS.gene30148:intron | 40.0% |
| ! | GTGGGAATATTTGGTGGTTT+GGG | + | chr3.3:42602156-42602175 | MS.gene30148:intron | 40.0% |
| ! | TAAAGCGTTACTCGTGGAAT+TGG | + | chr3.3:42601417-42601436 | MS.gene30148:intron | 40.0% |
| ! | TATTGGTGTTCACTGTTCAG+AGG | + | chr3.3:42604960-42604979 | MS.gene30148:intron | 40.0% |
| ! | TCTAATGGACCAGCAACTAA+CGG | - | chr3.3:42601861-42601880 | None:intergenic | 40.0% |
| ! | TCTTTTCATGCTTCGTGACA+AGG | - | chr3.3:42605066-42605085 | None:intergenic | 40.0% |
| ! | TTGTTTGCTTGAGTACTGTG+CGG | + | chr3.3:42602341-42602360 | MS.gene30148:intron | 40.0% |
| ! | TTTCATTGGTTGCGGCATTT+AGG | + | chr3.3:42601804-42601823 | MS.gene30148:intron | 40.0% |
| ! | TTTGAGGTTTGTTCGAAGGT+TGG | + | chr3.3:42601981-42602000 | MS.gene30148:intron | 40.0% |
| ! | TTTGGTGTATTTGGAAGGCA+AGG | + | chr3.3:42601349-42601368 | MS.gene30148:intron | 40.0% |
| !! | AAGAGAGGCGTTATTGATCA+GGG | + | chr3.3:42601105-42601124 | MS.gene30148:intron | 40.0% |
| !! | AGAATCTCATGGGGTTTTGT+TGG | + | chr3.3:42602114-42602133 | MS.gene30148:intron | 40.0% |
| !! | ATATTTCAGGTTCTCGGTAG+CGG | + | chr3.3:42603896-42603915 | MS.gene30148:intron | 40.0% |
| !! | ATTGATGATGGCCACAAAGA+CGG | + | chr3.3:42605411-42605430 | MS.gene30148:CDS | 40.0% |
| !! | CACTCTGTGGTATTTTAGAC+AGG | + | chr3.3:42601688-42601707 | MS.gene30148:intron | 40.0% |
| !! | CTTAGTGTGATTTGGTTTGC+TGG | + | chr3.3:42601324-42601343 | MS.gene30148:intron | 40.0% |
| !! | GCAGCTCTGATAGTTGTTTT+TGG | + | chr3.3:42602210-42602229 | MS.gene30148:intron | 40.0% |
| !! | GTGGCATGGTTTAGTTTGAT+TGG | + | chr3.3:42605020-42605039 | MS.gene30148:intron | 40.0% |
| !! | TAAGAGAGGCGTTATTGATC+AGG | + | chr3.3:42601104-42601123 | MS.gene30148:intron | 40.0% |
| !! | TGATTTGGTTTGCTGGCATT+TGG | + | chr3.3:42601331-42601350 | MS.gene30148:intron | 40.0% |
| !! | TGGCATTTGGTGTATTTGGA+AGG | + | chr3.3:42601344-42601363 | MS.gene30148:intron | 40.0% |
| !! | TGGTCTTTGCTATTGTTGAC+CGG | + | chr3.3:42601890-42601909 | MS.gene30148:intron | 40.0% |
| !! | TGTTGTTGTTGGTCTTGTCT+TGG | + | chr3.3:42604912-42604931 | MS.gene30148:intron | 40.0% |
| !! | TTGCTGGCATTTGGTGTATT+TGG | + | chr3.3:42601340-42601359 | MS.gene30148:intron | 40.0% |
| !!! | ACTTTTTCAACACCGACAGA+TGG | - | chr3.3:42605091-42605110 | None:intergenic | 40.0% |
| !!! | ATTTTCTAAGACGAGCTGCT+TGG | + | chr3.3:42603522-42603541 | MS.gene30148:intron | 40.0% |
| !!! | CCTTTTTGAGGTTTGTTCGA+AGG | + | chr3.3:42601977-42601996 | MS.gene30148:intron | 40.0% |
| !!! | GTGTGTTTTGTGTTGTTTGC+TGG | + | chr3.3:42602311-42602330 | MS.gene30148:intron | 40.0% |
| !!! | TGATTTTTGGCACTTGGGTT+TGG | + | chr3.3:42600677-42600696 | MS.gene30148:intron | 40.0% |
| AACCCCTTATTCGATGCCAA+TGG | - | chr3.3:42603306-42603325 | None:intergenic | 45.0% | |
| AAGGCGACTATCTTGGACTT+CGG | + | chr3.3:42605214-42605233 | MS.gene30148:CDS | 45.0% | |
| AATAGATATGGGGTCAGGGA+TGG | + | chr3.3:42600837-42600856 | MS.gene30148:intron | 45.0% | |
| AATGAAACCAACCAGACCCT+AGG | - | chr3.3:42604211-42604230 | None:intergenic | 45.0% | |
| AATTCTGATCCAACACAGCC+AGG | - | chr3.3:42602087-42602106 | None:intergenic | 45.0% | |
| ACCACCAAATATTCCCACCA+AGG | - | chr3.3:42602154-42602173 | None:intergenic | 45.0% | |
| ACGTCAGTATGCATCACCAA+GGG | - | chr3.3:42603869-42603888 | None:intergenic | 45.0% | |
| ACTATCAGAGCTGCACAAGT+AGG | - | chr3.3:42602204-42602223 | None:intergenic | 45.0% | |
| AGAAGAAGACCTGGAATTGG+AGG | + | chr3.3:42600361-42600380 | MS.gene30148:CDS | 45.0% | |
| AGCAGATTTCCTTGTTGCTC+AGG | + | chr3.3:42602265-42602284 | MS.gene30148:intron | 45.0% | |
| AGTGTGCCAGACCTTCATTA+TGG | - | chr3.3:42601254-42601273 | None:intergenic | 45.0% | |
| ATAGATATGGGGTCAGGGAT+GGG | + | chr3.3:42600838-42600857 | MS.gene30148:intron | 45.0% | |
| ATATCAGTAGTTTCGGCAGC+AGG | + | chr3.3:42601715-42601734 | MS.gene30148:intron | 45.0% | |
| ATCAGTGTTGTGGGAAATGG+TGG | + | chr3.3:42602487-42602506 | MS.gene30148:intron | 45.0% | |
| ATGGGAGTGGAAAATTAGGG+AGG | + | chr3.3:42600782-42600801 | MS.gene30148:intron | 45.0% | |
| ATTGATCAGTCCACCGTTGA+GGG | - | chr3.3:42603592-42603611 | None:intergenic | 45.0% | |
| CAGAGAAGAAAAAGTGACCG+TGG | + | chr3.3:42603639-42603658 | MS.gene30148:CDS | 45.0% | |
| CGATAATGTCAAGGTAGAGG+TGG | - | chr3.3:42602674-42602693 | None:intergenic | 45.0% | |
| CTCTTCTTAGCAAATGGGAG+TGG | + | chr3.3:42600769-42600788 | MS.gene30148:intron | 45.0% | |
| CTGAAGTGATCGATCAGGTT+TGG | + | chr3.3:42601607-42601626 | MS.gene30148:intron | 45.0% | |
| CTTGGTTTACTTCAGGGTCA+AGG | + | chr3.3:42605167-42605186 | MS.gene30148:intron | 45.0% | |
| GAAAATTAGGGAGGCTAGAG+AGG | + | chr3.3:42600791-42600810 | MS.gene30148:intron | 45.0% | |
| GAAGAAGACCTGGAATTGGA+GGG | + | chr3.3:42600362-42600381 | MS.gene30148:CDS | 45.0% | |
| GACTCTTAAAAGCCGGAAAG+TGG | - | chr3.3:42604080-42604099 | None:intergenic | 45.0% | |
| GACTGATCCTTCATGGTTGA+GGG | + | chr3.3:42600996-42601015 | MS.gene30148:intron | 45.0% | |
| GCAGTGTGGATCTGATCATT+TGG | + | chr3.3:42602287-42602306 | MS.gene30148:intron | 45.0% | |
| GCGCTAATTGTTGGTATCAC+TGG | + | chr3.3:42603206-42603225 | MS.gene30148:intron | 45.0% | |
| GGTCAATAGATATGGGGTCA+GGG | + | chr3.3:42600833-42600852 | MS.gene30148:intron | 45.0% | |
| GTTTGTAACCCTCCAATTCC+AGG | - | chr3.3:42600373-42600392 | None:intergenic | 45.0% | |
| TAAAAGCCGGAAAGTGGAAG+AGG | - | chr3.3:42604074-42604093 | None:intergenic | 45.0% | |
| TACATGCATCCCAAGTCACA+TGG | - | chr3.3:42602861-42602880 | None:intergenic | 45.0% | |
| TACCAAGTACCTGCAAACAC+CGG | - | chr3.3:42601195-42601214 | None:intergenic | 45.0% | |
| TATGGTATAGACCTAGGGTC+TGG | + | chr3.3:42604197-42604216 | MS.gene30148:intron | 45.0% | |
| TCCTGTCAAAGACGAAATGG+GGG | - | chr3.3:42605466-42605485 | None:intergenic | 45.0% | |
| TCCTTGGTGGGAATATTTGG+TGG | + | chr3.3:42602150-42602169 | MS.gene30148:intron | 45.0% | |
| TGGTCAATAGATATGGGGTC+AGG | + | chr3.3:42600832-42600851 | MS.gene30148:intron | 45.0% | |
| TGGTCTTTGTTCAGCTCAGT+TGG | - | chr3.3:42603968-42603987 | None:intergenic | 45.0% | |
| ! | AGAAGGCATGCAGCAAAGTT+AGG | + | chr3.3:42604605-42604624 | MS.gene30148:intron | 45.0% |
| ! | AGGCAACACTTTGGTTTCAG+CGG | + | chr3.3:42604790-42604809 | MS.gene30148:intron | 45.0% |
| ! | ATATTTGGTGGTTTGGGCAG+GGG | + | chr3.3:42602162-42602181 | MS.gene30148:intron | 45.0% |
| ! | CACTATCTGATATAGCGGAG+TGG | + | chr3.3:42601583-42601602 | MS.gene30148:intron | 45.0% |
| ! | CTAATGGACCAGCAACTAAC+GGG | - | chr3.3:42601860-42601879 | None:intergenic | 45.0% |
| ! | CTTTTCCCATTAAGTGGGGT+CGG | - | chr3.3:42604879-42604898 | None:intergenic | 45.0% |
| ! | GAATATTTGGTGGTTTGGGC+AGG | + | chr3.3:42602160-42602179 | MS.gene30148:intron | 45.0% |
| ! | GGTGGGAATATTTGGTGGTT+TGG | + | chr3.3:42602155-42602174 | MS.gene30148:intron | 45.0% |
| !! | AGAGAGGCGTTATTGATCAG+GGG | + | chr3.3:42601106-42601125 | MS.gene30148:intron | 45.0% |
| !! | GGCATCGAATAAGGGGTTTT+GGG | + | chr3.3:42603308-42603327 | MS.gene30148:CDS | 45.0% |
| !! | GGTCTTTGCTATTGTTGACC+GGG | + | chr3.3:42601891-42601910 | MS.gene30148:intron | 45.0% |
| !! | TATTTCAGGTTCTCGGTAGC+GGG | + | chr3.3:42603897-42603916 | MS.gene30148:intron | 45.0% |
| !! | TCATCTCTGTTTTGAGTGCC+CGG | + | chr3.3:42601173-42601192 | MS.gene30148:intron | 45.0% |
| !! | TGGCATCGAATAAGGGGTTT+TGG | + | chr3.3:42603307-42603326 | MS.gene30148:CDS | 45.0% |
| !! | TGTGTGCGTCTGTTTCTGTA+TGG | + | chr3.3:42601659-42601678 | MS.gene30148:intron | 45.0% |
| !! | TTGGCACTTGGGTTTGGTTT+TGG | + | chr3.3:42600683-42600702 | MS.gene30148:intron | 45.0% |
| !!! | CACGGTCACTTTTTCTTCTC+TGG | - | chr3.3:42603641-42603660 | None:intergenic | 45.0% |
| !!! | CACTTTTTCTTCTCTGGCGA+AGG | - | chr3.3:42603635-42603654 | None:intergenic | 45.0% |
| !!! | TGGCACTTGGGTTTGGTTTT+GGG | + | chr3.3:42600684-42600703 | MS.gene30148:intron | 45.0% |
| !! | AAAAATAAAATAAAGTTAAA+AGG | - | chr3.3:42604361-42604380 | None:intergenic | 5.0% |
| !! | ACAAAAAAAAAATAAAAAAT+GGG | - | chr3.3:42600542-42600561 | None:intergenic | 5.0% |
| AAGACGGAAAACGACGGTAC+TGG | + | chr3.3:42605427-42605446 | MS.gene30148:CDS | 50.0% | |
| AATCCTTGCCCGTTAGTTGC+TGG | + | chr3.3:42601849-42601868 | MS.gene30148:intron | 50.0% | |
| AATTGTGGACCTGGCTGTGT+TGG | + | chr3.3:42602075-42602094 | MS.gene30148:intron | 50.0% | |
| ACAAACAGCTGCAGCAGCAA+GGG | + | chr3.3:42600387-42600406 | MS.gene30148:CDS | 50.0% | |
| ACACATCCGAGACATGCTCT+GGG | - | chr3.3:42601497-42601516 | None:intergenic | 50.0% | |
| ACCAAGTACCTGCAAACACC+GGG | - | chr3.3:42601194-42601213 | None:intergenic | 50.0% | |
| AGAAACAGACGCACACAGAG+AGG | - | chr3.3:42601656-42601675 | None:intergenic | 50.0% | |
| AGACCAAGCAGGCCTTCTAA+TGG | - | chr3.3:42601876-42601895 | None:intergenic | 50.0% | |
| AGGCGACTATCTTGGACTTC+GGG | + | chr3.3:42605215-42605234 | MS.gene30148:CDS | 50.0% | |
| ATCCCAAGTCACATGGTGTG+TGG | - | chr3.3:42602854-42602873 | None:intergenic | 50.0% | |
| ATCCTTCATGGTTGAGGGCT+TGG | + | chr3.3:42601001-42601020 | MS.gene30148:intron | 50.0% | |
| CAACAAACTAGGATGCTGCG+TGG | - | chr3.3:42604460-42604479 | None:intergenic | 50.0% | |
| CAATCCAGTGCATCTCAGAC+AGG | - | chr3.3:42602027-42602046 | None:intergenic | 50.0% | |
| CACGTCAGTATGCATCACCA+AGG | - | chr3.3:42603870-42603889 | None:intergenic | 50.0% | |
| CATCCTCGGAAACAACTCCA+CGG | - | chr3.3:42603659-42603678 | None:intergenic | 50.0% | |
| CATGCCACAGATGAAGCTTC+CGG | - | chr3.3:42605008-42605027 | None:intergenic | 50.0% | |
| CATTCTTTGGTCAGGGAGCA+AGG | + | chr3.3:42601549-42601568 | MS.gene30148:intron | 50.0% | |
| CGACCCCACTTAATGGGAAA+AGG | + | chr3.3:42604877-42604896 | MS.gene30148:intron | 50.0% | |
| CGACTGATCCTTCATGGTTG+AGG | + | chr3.3:42600995-42601014 | MS.gene30148:intron | 50.0% | |
| CTACATCAAGGTCATCCCAC+CGG | - | chr3.3:42602962-42602981 | None:intergenic | 50.0% | |
| GACGAAATGGGGGATACACA+CGG | - | chr3.3:42605456-42605475 | None:intergenic | 50.0% | |
| GATTGATCAGTCCACCGTTG+AGG | - | chr3.3:42603593-42603612 | None:intergenic | 50.0% | |
| GATTGGCAGCAGGAGAATTC+TGG | + | chr3.3:42601293-42601312 | MS.gene30148:intron | 50.0% | |
| GCCACAAAGACGGAAAACGA+CGG | + | chr3.3:42605421-42605440 | MS.gene30148:CDS | 50.0% | |
| GCGGCATTTAGGCTCTATCT+TGG | + | chr3.3:42601815-42601834 | MS.gene30148:intron | 50.0% | |
| GCGTGCTATCAGTAAGCTGA+AGG | + | chr3.3:42603686-42603705 | MS.gene30148:CDS | 50.0% | |
| GTATAGACCTAGGGTCTGGT+TGG | + | chr3.3:42604201-42604220 | MS.gene30148:intron | 50.0% | |
| GTGAATCCCAGAGCATGTCT+CGG | + | chr3.3:42601488-42601507 | MS.gene30148:intron | 50.0% | |
| TACAAACAGCTGCAGCAGCA+AGG | + | chr3.3:42600386-42600405 | MS.gene30148:CDS | 50.0% | |
| TACCTGCCTCTTCCACTTTC+CGG | + | chr3.3:42604065-42604084 | MS.gene30148:intron | 50.0% | |
| TAGATATGGGGTCAGGGATG+GGG | + | chr3.3:42600839-42600858 | MS.gene30148:intron | 50.0% | |
| TCAGCTCAGTTGGAACCGAA+CGG | - | chr3.3:42603958-42603977 | None:intergenic | 50.0% | |
| TCAGCTTACTGATAGCACGC+AGG | - | chr3.3:42603686-42603705 | None:intergenic | 50.0% | |
| TCCCAAGTCACATGGTGTGT+GGG | - | chr3.3:42602853-42602872 | None:intergenic | 50.0% | |
| TCCCACACACCATGTGACTT+GGG | + | chr3.3:42602849-42602868 | MS.gene30148:intron | 50.0% | |
| TCCCCCATTTCGTCTTTGAC+AGG | + | chr3.3:42605462-42605481 | MS.gene30148:CDS | 50.0% | |
| TGCATGCGCCAAAACAACAG+TGG | - | chr3.3:42605375-42605394 | None:intergenic | 50.0% | |
| TGGGCAGAGCTATTGGGAAT+TGG | + | chr3.3:42603327-42603346 | MS.gene30148:CDS | 50.0% | |
| TGTAGCCGACCCCACTTAAT+GGG | + | chr3.3:42604871-42604890 | MS.gene30148:intron | 50.0% | |
| TGTATGGATGTCCCACTCTG+TGG | + | chr3.3:42601675-42601694 | MS.gene30148:intron | 50.0% | |
| TTCCCACACACCATGTGACT+TGG | + | chr3.3:42602848-42602867 | MS.gene30148:intron | 50.0% | |
| TTGAAGGACTGATTGGCAGC+AGG | + | chr3.3:42601283-42601302 | MS.gene30148:intron | 50.0% | |
| TTGATCAGTCCACCGTTGAG+GGG | - | chr3.3:42603591-42603610 | None:intergenic | 50.0% | |
| TTGGCTACTAGACCCCTCAA+CGG | + | chr3.3:42603576-42603595 | MS.gene30148:CDS | 50.0% | |
| TTGTAGCCGACCCCACTTAA+TGG | + | chr3.3:42604870-42604889 | MS.gene30148:intron | 50.0% | |
| ! | CATGCATTCTGGTTGACCCT+TGG | + | chr3.3:42603850-42603869 | MS.gene30148:intron | 50.0% |
| ! | CTGTCTGAGATGCACTGGAT+TGG | + | chr3.3:42602025-42602044 | MS.gene30148:intron | 50.0% |
| ! | GTGGTCTGAAGTGATCGATC+AGG | + | chr3.3:42601602-42601621 | MS.gene30148:intron | 50.0% |
| ! | TGGAGTGCTTAGTCCTTGGT+GGG | + | chr3.3:42602138-42602157 | MS.gene30148:intron | 50.0% |
| !! | ACCGTCGTTTTCCGTCTTTG+TGG | - | chr3.3:42605425-42605444 | None:intergenic | 50.0% |
| !!! | ACTGTTGTTTTGGCGCATGC+AGG | + | chr3.3:42605374-42605393 | MS.gene30148:intron | 50.0% |
| !!! | GGGTTTTGGGCAGAGCTATT+GGG | + | chr3.3:42603321-42603340 | MS.gene30148:CDS | 50.0% |
| !!! | TCTCATGGGGTTTTGTTGGC+TGG | + | chr3.3:42602118-42602137 | MS.gene30148:intron | 50.0% |
| !!! | TTGTTTTGGCGCATGCAGGA+GGG | + | chr3.3:42605378-42605397 | MS.gene30148:intron | 50.0% |
| AGCACGCAGGCAATCATCCT+CGG | - | chr3.3:42603673-42603692 | None:intergenic | 55.0% | |
| AGTAGTTTCGGCAGCAGGAG+GGG | + | chr3.3:42601720-42601739 | MS.gene30148:intron | 55.0% | |
| ATTGTTGACCGGGCGCTCAT+TGG | + | chr3.3:42601901-42601920 | MS.gene30148:intron | 55.0% | |
| CACACATCCGAGACATGCTC+TGG | - | chr3.3:42601498-42601517 | None:intergenic | 55.0% | |
| CAGAGCATGTCTCGGATGTG+TGG | + | chr3.3:42601496-42601515 | MS.gene30148:intron | 55.0% | |
| CAGGGGTCCATAAGGTGTGT+TGG | + | chr3.3:42601123-42601142 | MS.gene30148:intron | 55.0% | |
| CAGTAGTTTCGGCAGCAGGA+GGG | + | chr3.3:42601719-42601738 | MS.gene30148:intron | 55.0% | |
| CGGAAGCTTCATCTGTGGCA+TGG | + | chr3.3:42605006-42605025 | MS.gene30148:intron | 55.0% | |
| CTCGGATGTGTGGACTTGCA+AGG | + | chr3.3:42601506-42601525 | MS.gene30148:intron | 55.0% | |
| GGGAGGCTAGAGAGGGTTTA+TGG | + | chr3.3:42600799-42600818 | MS.gene30148:intron | 55.0% | |
| GGTCCATTAGAAGGCCTGCT+TGG | + | chr3.3:42601870-42601889 | MS.gene30148:intron | 55.0% | |
| TCAGTAGTTTCGGCAGCAGG+AGG | + | chr3.3:42601718-42601737 | MS.gene30148:intron | 55.0% | |
| TCCACACTGCCTGAGCAACA+AGG | - | chr3.3:42602277-42602296 | None:intergenic | 55.0% | |
| TCCTTGTTGCTCAGGCAGTG+TGG | + | chr3.3:42602273-42602292 | MS.gene30148:intron | 55.0% | |
| TGCCAAGCCCTCAACCATGA+AGG | - | chr3.3:42601006-42601025 | None:intergenic | 55.0% | |
| TTTGAGTGCCCGGTGTTTGC+AGG | + | chr3.3:42601183-42601202 | MS.gene30148:intron | 55.0% | |
| ! | AGCACCGGAAGCTTCATCTG+TGG | + | chr3.3:42605001-42605020 | MS.gene30148:intron | 55.0% |
| ! | CTGGAGTGCTTAGTCCTTGG+TGG | + | chr3.3:42602137-42602156 | MS.gene30148:intron | 55.0% |
| ! | TGACCGTGGAGTTGTTTCCG+AGG | + | chr3.3:42603653-42603672 | MS.gene30148:CDS | 55.0% |
| ! | TGGCTGGAGTGCTTAGTCCT+TGG | + | chr3.3:42602134-42602153 | MS.gene30148:intron | 55.0% |
| !!! | GGGGTTTTGGGCAGAGCTAT+TGG | + | chr3.3:42603320-42603339 | MS.gene30148:CDS | 55.0% |
| !!! | GTTGTTTTGGCGCATGCAGG+AGG | + | chr3.3:42605377-42605396 | MS.gene30148:intron | 55.0% |
| AGCCGGAAAGTGGAAGAGGC+AGG | - | chr3.3:42604070-42604089 | None:intergenic | 60.0% | |
| GACGAGCTGCTTGGCTAGAC+AGG | + | chr3.3:42603531-42603550 | MS.gene30148:intron | 60.0% | |
| GCCCGGTGTTTGCAGGTACT+TGG | + | chr3.3:42601190-42601209 | MS.gene30148:intron | 60.0% | |
| GCTACTAGACCCCTCAACGG+TGG | + | chr3.3:42603579-42603598 | MS.gene30148:CDS | 60.0% | |
| ! | GGACCAGCAACTAACGGGCA+AGG | - | chr3.3:42601855-42601874 | None:intergenic | 60.0% |
| ! | GTGGCCTGTCTGAGATGCAC+TGG | + | chr3.3:42602020-42602039 | MS.gene30148:intron | 60.0% |
| CCAAGCCACCAATGAGCGCC+CGG | - | chr3.3:42601912-42601931 | None:intergenic | 65.0% | |
| GTTGACCGGGCGCTCATTGG+TGG | + | chr3.3:42601904-42601923 | MS.gene30148:intron | 65.0% | |
| GTTTCGGCAGCAGGAGGGGA+AGG | + | chr3.3:42601724-42601743 | MS.gene30148:intron | 65.0% | |
| ! | CCGGGCGCTCATTGGTGGCT+TGG | + | chr3.3:42601909-42601928 | MS.gene30148:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 42600358 | 42605500 | 42600358 | ID=MS.gene30148 |
| chr3.3 | mRNA | 42600358 | 42605500 | 42600358 | ID=MS.gene30148.t1;Parent=MS.gene30148 |
| chr3.3 | exon | 42600358 | 42600519 | 42600358 | ID=MS.gene30148.t1.exon1;Parent=MS.gene30148.t1 |
| chr3.3 | CDS | 42600358 | 42600519 | 42600358 | ID=cds.MS.gene30148.t1;Parent=MS.gene30148.t1 |
| chr3.3 | exon | 42603234 | 42603369 | 42603234 | ID=MS.gene30148.t1.exon2;Parent=MS.gene30148.t1 |
| chr3.3 | CDS | 42603234 | 42603369 | 42603234 | ID=cds.MS.gene30148.t1;Parent=MS.gene30148.t1 |
| chr3.3 | exon | 42603553 | 42603707 | 42603553 | ID=MS.gene30148.t1.exon3;Parent=MS.gene30148.t1 |
| chr3.3 | CDS | 42603553 | 42603707 | 42603553 | ID=cds.MS.gene30148.t1;Parent=MS.gene30148.t1 |
| chr3.3 | exon | 42603905 | 42604012 | 42603905 | ID=MS.gene30148.t1.exon4;Parent=MS.gene30148.t1 |
| chr3.3 | CDS | 42603905 | 42604012 | 42603905 | ID=cds.MS.gene30148.t1;Parent=MS.gene30148.t1 |
| chr3.3 | exon | 42605182 | 42605271 | 42605182 | ID=MS.gene30148.t1.exon5;Parent=MS.gene30148.t1 |
| chr3.3 | CDS | 42605182 | 42605271 | 42605182 | ID=cds.MS.gene30148.t1;Parent=MS.gene30148.t1 |
| chr3.3 | exon | 42605396 | 42605500 | 42605396 | ID=MS.gene30148.t1.exon6;Parent=MS.gene30148.t1 |
| chr3.3 | CDS | 42605396 | 42605500 | 42605396 | ID=cds.MS.gene30148.t1;Parent=MS.gene30148.t1 |
| Gene Sequence |
| Protein sequence |
