Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30914.t1 | XP_020220731.1 | 84.7 | 727 | 98 | 2 | 1 | 715 | 1 | 726 | 0.00E+00 | 1097 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30914.t1 | Q9M1H3 | 76.2 | 724 | 162 | 4 | 1 | 715 | 1 | 723 | 5.1e-285 | 981.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30914.t1 | A0A1S2XNE6 | 85.8 | 716 | 100 | 2 | 1 | 715 | 1 | 715 | 0.0e+00 | 1091.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene054719 | MS.gene30914 | PPI |
MS.gene30914 | MS.gene050086 | PPI |
MS.gene40858 | MS.gene30914 | PPI |
MS.gene69745 | MS.gene30914 | PPI |
MS.gene31234 | MS.gene30914 | PPI |
MS.gene044268 | MS.gene30914 | PPI |
MS.gene028666 | MS.gene30914 | PPI |
MS.gene70530 | MS.gene30914 | PPI |
MS.gene98065 | MS.gene30914 | PPI |
MS.gene25771 | MS.gene30914 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30914.t1 | MTR_8g075040 | 90.909 | 715 | 63 | 2 | 1 | 715 | 54 | 766 | 0.0 | 1239 |
MS.gene30914.t1 | MTR_7g018380 | 90.782 | 716 | 64 | 2 | 1 | 715 | 1 | 715 | 0.0 | 1235 |
MS.gene30914.t1 | MTR_1g066620 | 93.214 | 560 | 37 | 1 | 157 | 715 | 2 | 561 | 0.0 | 1063 |
MS.gene30914.t1 | MTR_3g080970 | 43.286 | 566 | 292 | 10 | 147 | 705 | 167 | 710 | 1.26e-151 | 457 |
MS.gene30914.t1 | MTR_2g095440 | 41.516 | 554 | 290 | 8 | 153 | 705 | 62 | 582 | 1.65e-143 | 432 |
MS.gene30914.t1 | MTR_2g095440 | 41.304 | 552 | 290 | 8 | 155 | 705 | 4 | 522 | 1.04e-142 | 428 |
MS.gene30914.t1 | MTR_2g095440 | 41.455 | 550 | 288 | 8 | 157 | 705 | 12 | 528 | 1.97e-142 | 428 |
MS.gene30914.t1 | MTR_4g057795 | 41.166 | 566 | 275 | 9 | 153 | 705 | 62 | 582 | 6.05e-141 | 426 |
MS.gene30914.t1 | MTR_4g057795 | 40.891 | 516 | 247 | 9 | 203 | 705 | 2 | 472 | 1.16e-124 | 380 |
MS.gene30914.t1 | MTR_3g095010 | 29.561 | 592 | 365 | 14 | 145 | 715 | 96 | 656 | 2.30e-62 | 221 |
MS.gene30914.t1 | MTR_3g095010 | 26.073 | 303 | 174 | 5 | 155 | 457 | 433 | 685 | 1.39e-21 | 100 |
MS.gene30914.t1 | MTR_6g011680 | 32.314 | 229 | 116 | 11 | 488 | 691 | 1008 | 1222 | 6.59e-13 | 73.2 |
MS.gene30914.t1 | MTR_8g022270 | 28.696 | 230 | 123 | 8 | 488 | 691 | 598 | 812 | 7.66e-13 | 72.8 |
MS.gene30914.t1 | MTR_7g102070 | 28.390 | 236 | 128 | 8 | 482 | 691 | 420 | 640 | 1.25e-12 | 72.0 |
MS.gene30914.t1 | MTR_1g063170 | 29.858 | 211 | 113 | 7 | 482 | 666 | 393 | 594 | 1.39e-12 | 72.0 |
MS.gene30914.t1 | MTR_4g124050 | 28.814 | 236 | 106 | 9 | 493 | 691 | 1055 | 1265 | 2.92e-12 | 70.9 |
MS.gene30914.t1 | MTR_3g107800 | 29.661 | 236 | 104 | 9 | 493 | 691 | 1031 | 1241 | 3.14e-12 | 70.9 |
MS.gene30914.t1 | MTR_5g029750 | 27.193 | 228 | 129 | 9 | 488 | 691 | 989 | 1203 | 1.40e-11 | 68.6 |
MS.gene30914.t1 | MTR_7g079540 | 36.025 | 161 | 79 | 6 | 505 | 643 | 101 | 259 | 5.81e-11 | 64.7 |
MS.gene30914.t1 | MTR_7g079540 | 36.025 | 161 | 79 | 6 | 505 | 643 | 101 | 259 | 9.47e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30914.t1 | AT3G54540 | 76.204 | 727 | 157 | 5 | 1 | 715 | 1 | 723 | 0.0 | 1101 |
MS.gene30914.t1 | AT3G54540 | 76.204 | 727 | 157 | 5 | 1 | 715 | 1 | 723 | 0.0 | 1101 |
MS.gene30914.t1 | AT1G64550 | 43.937 | 569 | 289 | 11 | 145 | 705 | 165 | 711 | 3.72e-150 | 454 |
MS.gene30914.t1 | AT5G60790 | 41.081 | 555 | 291 | 8 | 153 | 705 | 67 | 587 | 1.02e-139 | 423 |
MS.gene30914.t1 | AT5G64840 | 28.571 | 567 | 371 | 9 | 146 | 703 | 89 | 630 | 4.32e-63 | 223 |
MS.gene30914.t1 | AT5G09930 | 29.072 | 571 | 365 | 12 | 145 | 703 | 74 | 616 | 6.59e-60 | 214 |
MS.gene30914.t1 | AT5G09930 | 27.244 | 312 | 152 | 6 | 155 | 454 | 411 | 659 | 6.78e-20 | 95.1 |
MS.gene30914.t1 | AT3G28390 | 29.956 | 227 | 116 | 9 | 493 | 691 | 985 | 1196 | 3.73e-12 | 70.5 |
MS.gene30914.t1 | AT2G36910 | 29.612 | 206 | 110 | 7 | 487 | 666 | 367 | 563 | 4.33e-12 | 70.5 |
MS.gene30914.t1 | AT3G28345 | 29.808 | 208 | 121 | 7 | 481 | 666 | 988 | 1192 | 7.87e-12 | 69.7 |
MS.gene30914.t1 | AT3G28860 | 31.818 | 220 | 119 | 9 | 493 | 691 | 1015 | 1224 | 9.04e-12 | 69.3 |
MS.gene30914.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 1.07e-11 | 69.3 |
MS.gene30914.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 1.07e-11 | 69.3 |
MS.gene30914.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 1.07e-11 | 69.3 |
MS.gene30914.t1 | AT1G67940 | 31.754 | 211 | 102 | 9 | 166 | 367 | 41 | 218 | 1.33e-11 | 66.2 |
MS.gene30914.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 4.14e-11 | 67.4 |
MS.gene30914.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 4.14e-11 | 67.4 |
MS.gene30914.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 4.14e-11 | 67.4 |
MS.gene30914.t1 | AT1G70610 | 32.184 | 174 | 102 | 4 | 488 | 646 | 455 | 627 | 4.86e-11 | 66.6 |
MS.gene30914.t1 | AT1G70610 | 32.184 | 174 | 102 | 4 | 488 | 646 | 274 | 446 | 6.34e-11 | 65.9 |
Find 165 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGCAAAACTTGGTAAATT+TGG | 0.116784 | 1.2:-50056775 | MS.gene30914:CDS |
CTCTGCCATGTTAGCAAGTA+TGG | 0.253861 | 1.2:-50058459 | MS.gene30914:CDS |
AGCTGCCCATTTGGCTGAAC+AGG | 0.276829 | 1.2:-50058216 | MS.gene30914:CDS |
ATGAAGAACGGAGTCAAATA+TGG | 0.280825 | 1.2:-50056519 | MS.gene30914:CDS |
AGAAATTGAAAGCAGCTAAA+AGG | 0.323101 | 1.2:-50057299 | MS.gene30914:CDS |
TCTTTGCCTGTTCAGCCAAA+TGG | 0.324070 | 1.2:+50058210 | None:intergenic |
TGTTGATGTTGGCATTGATA+TGG | 0.325155 | 1.2:-50057028 | MS.gene30914:CDS |
GTCTGAAATCCTCCCGGTTT+GGG | 0.332518 | 1.2:+50057058 | None:intergenic |
TAAGAATATTGACGTCCTTC+TGG | 0.334816 | 1.2:-50057925 | MS.gene30914:CDS |
GTGCAAAACTTGGTAAATTT+GGG | 0.337873 | 1.2:-50056774 | MS.gene30914:CDS |
ATATCTTCTAGCTGGTGATT+TGG | 0.356211 | 1.2:-50056953 | MS.gene30914:CDS |
TTGTAATCCTCAAATGTTCC+AGG | 0.358592 | 1.2:+50056466 | None:intergenic |
ACTTGTGTGGTACCTCTACT+TGG | 0.360096 | 1.2:+50057169 | None:intergenic |
ACTCCCATTGTCAAACTATC+AGG | 0.364911 | 1.2:-50056730 | MS.gene30914:CDS |
ACCCACAAATCATCTGGATA+TGG | 0.365374 | 1.2:-50056638 | MS.gene30914:CDS |
GTTGCCATTGTTGGGCCTAA+TGG | 0.366354 | 1.2:-50056997 | MS.gene30914:CDS |
CTTTGCCTGTTCAGCCAAAT+GGG | 0.383181 | 1.2:+50058211 | None:intergenic |
AGAAGGACGTCAATATTCTT+AGG | 0.383693 | 1.2:+50057927 | None:intergenic |
GGGACTCGTGTTGCCATTGT+TGG | 0.395294 | 1.2:-50057006 | MS.gene30914:CDS |
TTGACTTTCCCATTCCATTC+GGG | 0.395555 | 1.2:+50057988 | None:intergenic |
GTTGACTTTCCCATTCCATT+CGG | 0.398483 | 1.2:+50057987 | None:intergenic |
TTGACCTGAGGGCTGTTCTC+TGG | 0.403120 | 1.2:-50057521 | MS.gene30914:CDS |
AGTCGGGCTTTGGTTCTTGA+TGG | 0.407371 | 1.2:-50058140 | MS.gene30914:CDS |
TGTCATCCCAAGTCGGGCTT+TGG | 0.407674 | 1.2:-50058150 | MS.gene30914:CDS |
TCCATATCCAGATGATTTGT+GGG | 0.411181 | 1.2:+50056637 | None:intergenic |
GATCTACAAAATGCAGCTTC+AGG | 0.411979 | 1.2:-50057810 | MS.gene30914:CDS |
TTACTAAGTCCCTCCTGGTC+TGG | 0.421538 | 1.2:+50056811 | None:intergenic |
TGAGCTTTAGCTACCCAAAC+CGG | 0.421726 | 1.2:-50057071 | MS.gene30914:CDS |
CATGGTTTAGCCTTTGTAGA+TGG | 0.422109 | 1.2:+50058518 | None:intergenic |
CTTCGAAGTTCACCTTCACT+TGG | 0.427699 | 1.2:+50056928 | None:intergenic |
ATTTCAAACTTCATTTCTAT+CGG | 0.428855 | 1.2:-50057398 | MS.gene30914:CDS |
AGTCTGAAATCCTCCCGGTT+TGG | 0.430408 | 1.2:+50057057 | None:intergenic |
TTCCATATCCAGATGATTTG+TGG | 0.432684 | 1.2:+50056636 | None:intergenic |
TTTCAAACTTCATTTCTATC+GGG | 0.433047 | 1.2:-50057397 | MS.gene30914:CDS |
GAGATATTCCCAACACTTTG+TGG | 0.436079 | 1.2:-50056884 | MS.gene30914:CDS |
AGCATCGAAAAGCAAAAGTA+AGG | 0.436628 | 1.2:-50057214 | MS.gene30914:CDS |
GAAGTCAGAAATTGAGGATA+GGG | 0.438140 | 1.2:-50056906 | MS.gene30914:CDS |
TCATGGAAAACGGTATGGTT+TGG | 0.441052 | 1.2:-50058015 | MS.gene30914:CDS |
TAATGTTGTCATCCCAAGTC+GGG | 0.442342 | 1.2:-50058156 | MS.gene30914:CDS |
GCAAAGAAAGAAGCTCTTAG+AGG | 0.450601 | 1.2:-50058194 | MS.gene30914:CDS |
TCCCTCTGATGATGATGAAT+CGG | 0.452332 | 1.2:-50058336 | MS.gene30914:CDS |
GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 1.2:+50056860 | None:intergenic |
TATGCAGAAGCTTTCGGAGC+AGG | 0.454924 | 1.2:+50058380 | None:intergenic |
CAGCAGCATCAGACCCCATC+AGG | 0.463191 | 1.2:+50057706 | None:intergenic |
AGATGAACCCACAAATCATC+TGG | 0.463680 | 1.2:-50056644 | MS.gene30914:CDS |
GTTGATGTTGGCATTGATAT+GGG | 0.466393 | 1.2:-50057027 | MS.gene30914:CDS |
GGTGTGAGCTCTGTAGGTTC+AGG | 0.469356 | 1.2:+50057117 | None:intergenic |
CTGGTTGAGCAGGAGGTAGT+TGG | 0.476330 | 1.2:-50057906 | MS.gene30914:CDS |
TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 1.2:+50056876 | None:intergenic |
TGACGTCCTTCTGGTTGAGC+AGG | 0.476988 | 1.2:-50057916 | MS.gene30914:CDS |
GTCCTACAAAATCCTTTAGT+GGG | 0.477264 | 1.2:-50057626 | MS.gene30914:CDS |
AAATTTCCCTGGAACATTTG+AGG | 0.478395 | 1.2:-50056473 | MS.gene30914:CDS |
TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 1.2:-50056714 | MS.gene30914:CDS |
TTGGTTGGCCCGAATGGAAT+GGG | 0.482720 | 1.2:-50057996 | MS.gene30914:CDS |
GCGGGTGGGAACAACGTTGT+AGG | 0.488336 | 1.2:-50057353 | MS.gene30914:CDS |
CTTGCTTACTAAGTCCCTCC+TGG | 0.488701 | 1.2:+50056806 | None:intergenic |
ATTGATTTCACGTGTGTGTA+AGG | 0.490491 | 1.2:-50056542 | MS.gene30914:CDS |
GAGGCTGTCCGTGCAAAACT+TGG | 0.491172 | 1.2:-50056784 | MS.gene30914:CDS |
CAAATATGGGTTGTTGAAGA+TGG | 0.492000 | 1.2:-50056505 | MS.gene30914:CDS |
ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 1.2:-50056713 | MS.gene30914:CDS |
TGTCCTACAAAATCCTTTAG+TGG | 0.493667 | 1.2:-50057627 | MS.gene30914:CDS |
CCTCAGGTCAAGATGATTAG+TGG | 0.497140 | 1.2:+50057533 | None:intergenic |
AGATGATACTAATGAGGAAG+AGG | 0.497593 | 1.2:-50057769 | MS.gene30914:CDS |
TTCGAAGAAGTCAGAAATTG+AGG | 0.499370 | 1.2:-50056912 | MS.gene30914:CDS |
GGACTCGTGTTGCCATTGTT+GGG | 0.501610 | 1.2:-50057005 | MS.gene30914:CDS |
ACGTCAATATTCTTAGGTAC+TGG | 0.501876 | 1.2:+50057933 | None:intergenic |
TATGGTTTGGTTGGCCCGAA+TGG | 0.501890 | 1.2:-50058002 | MS.gene30914:CDS |
AGACTCTCAGATGTTGATGT+TGG | 0.502794 | 1.2:-50057039 | MS.gene30914:CDS |
AGAAGTCAGAAATTGAGGAT+AGG | 0.504671 | 1.2:-50056907 | MS.gene30914:CDS |
TAGTAAAGATGTTTCTAAGA+AGG | 0.504745 | 1.2:-50058495 | MS.gene30914:CDS |
TCAAGAACCAAAGCCCGACT+TGG | 0.505660 | 1.2:+50058143 | None:intergenic |
TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 1.2:+50056875 | None:intergenic |
TAGAAGAGTACTTGTGTCGC+TGG | 0.512213 | 1.2:-50057497 | MS.gene30914:CDS |
AGGAGCATGAGCAAAGACAT+AGG | 0.514702 | 1.2:-50058310 | MS.gene30914:CDS |
GTTTGACAATGGGAGTAAGA+TGG | 0.515153 | 1.2:+50056737 | None:intergenic |
TGAAGATATCTCATGGAAAA+CGG | 0.518295 | 1.2:-50058025 | MS.gene30914:CDS |
AGTGGCGGTGTGAGCTCTGT+AGG | 0.518413 | 1.2:+50057111 | None:intergenic |
TCAGTGTATGCAGAAGCTTT+CGG | 0.518649 | 1.2:+50058374 | None:intergenic |
TTGAAAGCAGCTAAAAGGAC+TGG | 0.519209 | 1.2:-50057294 | MS.gene30914:CDS |
AGACGAAGAAGGTACTGAAC+AGG | 0.519926 | 1.2:+50056838 | None:intergenic |
AATGCAGCTTCAGGTGAAGA+AGG | 0.521065 | 1.2:-50057801 | MS.gene30914:CDS |
CGGGTGGGAACAACGTTGTA+GGG | 0.523970 | 1.2:-50057352 | MS.gene30914:CDS |
CGTCCTTCTGGTTGAGCAGG+AGG | 0.524087 | 1.2:-50057913 | MS.gene30914:CDS |
ACTAATGAGGAAGAGGATGC+AGG | 0.525358 | 1.2:-50057762 | MS.gene30914:CDS |
TCTTCGTCTGCATCCAGACC+AGG | 0.526284 | 1.2:-50056824 | MS.gene30914:CDS |
GCTCTGTAGGTTCAGGAAAG+TGG | 0.529343 | 1.2:+50057124 | None:intergenic |
ATTGTTGGGCCTAATGGTGC+TGG | 0.529640 | 1.2:-50056991 | MS.gene30914:CDS |
GGAAAACGGTATGGTTTGGT+TGG | 0.532511 | 1.2:-50058011 | MS.gene30914:CDS |
TGGAACATTTGAGGATTACA+AGG | 0.541220 | 1.2:-50056464 | MS.gene30914:CDS |
TTTGGTTGGCCCGAATGGAA+TGG | 0.541464 | 1.2:-50057997 | MS.gene30914:CDS |
TTCAACATTAGCTGAAACAA+CGG | 0.543598 | 1.2:+50057860 | None:intergenic |
GTATGAACAATTACACCTGA+TGG | 0.543906 | 1.2:-50057721 | MS.gene30914:CDS |
CCCTCCTGATAGTTTGACAA+TGG | 0.544696 | 1.2:+50056726 | None:intergenic |
TTCAAACTTCATTTCTATCG+GGG | 0.545830 | 1.2:-50057396 | MS.gene30914:CDS |
AGCTAAAAGGACTGGAGACA+AGG | 0.547150 | 1.2:-50057286 | MS.gene30914:CDS |
TATGAACAATTACACCTGAT+GGG | 0.547968 | 1.2:-50057720 | MS.gene30914:CDS |
CCTCCTGATAGTTTGACAAT+GGG | 0.549798 | 1.2:+50056727 | None:intergenic |
TGAAGAACGGAGTCAAATAT+GGG | 0.553289 | 1.2:-50056518 | MS.gene30914:CDS |
GGGAAAGTTTGATGAGGATG+AGG | 0.553303 | 1.2:-50057193 | MS.gene30914:CDS |
GCATCAGTGAAGATATCTCA+TGG | 0.554022 | 1.2:-50058032 | MS.gene30914:CDS |
GGAGCATGAGCAAAGACATA+GGG | 0.554124 | 1.2:-50058309 | MS.gene30914:CDS |
TTAGAAACATCTTTACTACA+TGG | 0.554327 | 1.2:+50058500 | None:intergenic |
ATATCTCATGGAAAACGGTA+TGG | 0.560689 | 1.2:-50058020 | MS.gene30914:CDS |
TGATGATGATGAATCGGAAG+AGG | 0.561420 | 1.2:-50058330 | MS.gene30914:CDS |
CATCTGGATATGGAAAGTAT+TGG | 0.561515 | 1.2:-50056628 | MS.gene30914:CDS |
ACACTTCTATATCTTCTAGC+TGG | 0.562450 | 1.2:-50056961 | MS.gene30914:CDS |
CAAGAACCAAAGCCCGACTT+GGG | 0.562585 | 1.2:+50058144 | None:intergenic |
CACTAATCATCTTGACCTGA+GGG | 0.565689 | 1.2:-50057532 | MS.gene30914:CDS |
CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 1.2:-50056869 | MS.gene30914:CDS |
AGACAAGGCTCAACAAGATA+AGG | 0.569772 | 1.2:-50057271 | MS.gene30914:CDS |
TTAATGTTGTCATCCCAAGT+CGG | 0.570270 | 1.2:-50058157 | MS.gene30914:CDS |
GATGCACTGCATAAATTCAC+CGG | 0.574833 | 1.2:-50056595 | MS.gene30914:CDS |
CTGAGAGTCTGAAATCCTCC+CGG | 0.576382 | 1.2:+50057052 | None:intergenic |
GTGTCGCTGGAAGAAAACTT+TGG | 0.577100 | 1.2:-50057484 | MS.gene30914:CDS |
TATGGAAAGTATTGGTGCAT+TGG | 0.577172 | 1.2:-50056620 | MS.gene30914:CDS |
TCTCAGAGCATACTGTATTG+AGG | 0.578071 | 1.2:+50057436 | None:intergenic |
GCATCGAAAAGCAAAAGTAA+GGG | 0.580770 | 1.2:-50057213 | MS.gene30914:CDS |
TTCATCCATACTTGCTAACA+TGG | 0.581588 | 1.2:+50058454 | None:intergenic |
CTAACCAGAGAACAGCCCTC+AGG | 0.582718 | 1.2:+50057517 | None:intergenic |
CTTGTGTGGTACCTCTACTT+GGG | 0.584462 | 1.2:+50057170 | None:intergenic |
GAGCTTTAGCTACCCAAACC+GGG | 0.590884 | 1.2:-50057070 | MS.gene30914:CDS |
TCATCTAACAATAAAATGTG+AGG | 0.596826 | 1.2:+50056661 | None:intergenic |
CTCAGGTCAAGATGATTAGT+GGG | 0.599587 | 1.2:+50057534 | None:intergenic |
ACTTCAATAAGCTGCAGAAG+TGG | 0.601176 | 1.2:+50057093 | None:intergenic |
GGCTCAACAAGATAAGGTGA+AGG | 0.604308 | 1.2:-50057265 | MS.gene30914:CDS |
TCCTACAAAATCCTTTAGTG+GGG | 0.604851 | 1.2:-50057625 | MS.gene30914:CDS |
TTGATGTTGGCATTGATATG+GGG | 0.604870 | 1.2:-50057026 | MS.gene30914:CDS |
TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 1.2:+50057558 | None:intergenic |
TTCCGATTCATCATCATCAG+AGG | 0.609922 | 1.2:+50058334 | None:intergenic |
GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 1.2:-50056940 | MS.gene30914:CDS |
GGTACTGTAAGAAATTTCCC+TGG | 0.610293 | 1.2:-50056484 | MS.gene30914:CDS |
TCCGATTCATCATCATCAGA+GGG | 0.611392 | 1.2:+50058335 | None:intergenic |
GGAGTAAGATGGTTATGACT+AGG | 0.612089 | 1.2:+50056748 | None:intergenic |
CTGTAGTCTCTATACTTGTG+TGG | 0.612896 | 1.2:+50057156 | None:intergenic |
TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 1.2:+50056467 | None:intergenic |
TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 1.2:+50057557 | None:intergenic |
CCCATTGTCAAACTATCAGG+AGG | 0.616830 | 1.2:-50056727 | MS.gene30914:CDS |
GGAGGTAAATAAGAACTATG+AGG | 0.617027 | 1.2:-50057331 | MS.gene30914:CDS |
AGATAAAGATGATACTAATG+AGG | 0.617215 | 1.2:-50057775 | MS.gene30914:CDS |
TCGCTGGAAGAAAACTTTGG+TGG | 0.617745 | 1.2:-50057481 | MS.gene30914:CDS |
TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 1.2:+50058275 | None:intergenic |
GGAGGGACTTAGTAAGCAAG+AGG | 0.623814 | 1.2:-50056803 | MS.gene30914:CDS |
TTGGTTCTTGATGGAGACGA+TGG | 0.625464 | 1.2:-50058131 | MS.gene30914:CDS |
GGTCTGGATGCAGACGAAGA+AGG | 0.626289 | 1.2:+50056827 | None:intergenic |
CCACTAATCATCTTGACCTG+AGG | 0.627165 | 1.2:-50057533 | MS.gene30914:CDS |
ATGAACAATTACACCTGATG+GGG | 0.627362 | 1.2:-50057719 | MS.gene30914:CDS |
GGCTGATGTTAAGCCACTTG+AGG | 0.627689 | 1.2:-50058288 | MS.gene30914:CDS |
CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 1.2:+50057910 | None:intergenic |
TGAGGATGAGGCCCAAGTAG+AGG | 0.632111 | 1.2:-50057181 | MS.gene30914:CDS |
TCAATAAGCTGCAGAAGTGG+CGG | 0.634944 | 1.2:+50057096 | None:intergenic |
AGCACCATTAGGCCCAACAA+TGG | 0.640352 | 1.2:+50056993 | None:intergenic |
GTGGGAACAACGTTGTAGGG+AGG | 0.657576 | 1.2:-50057349 | MS.gene30914:CDS |
AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 1.2:-50056710 | MS.gene30914:CDS |
ACTAACAAGAACAACTCCAC+CGG | 0.661104 | 1.2:+50056576 | None:intergenic |
CCTACAAAATCCTTTAGTGG+GGG | 0.666533 | 1.2:-50057624 | MS.gene30914:CDS |
AAGTAAGGGAAAGTTTGATG+AGG | 0.667604 | 1.2:-50057199 | MS.gene30914:CDS |
AAATTCAGGACCATCTACAA+AGG | 0.671725 | 1.2:-50058528 | MS.gene30914:CDS |
CGTCTGCATCCAGACCAGGA+GGG | 0.678505 | 1.2:-50056820 | MS.gene30914:CDS |
TCGTCTGCATCCAGACCAGG+AGG | 0.681595 | 1.2:-50056821 | MS.gene30914:CDS |
CCATTGTCAAACTATCAGGA+GGG | 0.685258 | 1.2:-50056726 | MS.gene30914:CDS |
GTGTGTGTAAGGATGAAGAA+CGG | 0.687698 | 1.2:-50056531 | MS.gene30914:CDS |
GCACTGCATAAATTCACCGG+TGG | 0.691518 | 1.2:-50056592 | MS.gene30914:CDS |
GATTCATCATCATCAGAGGG+AGG | 0.699607 | 1.2:+50058338 | None:intergenic |
CTTTAGCTACCCAAACCGGG+AGG | 0.713201 | 1.2:-50057067 | MS.gene30914:CDS |
CAAGTATAGAGACTACAGCG+TGG | 0.794408 | 1.2:-50057151 | MS.gene30914:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTCAAACTTCATTTCTAT+CGG | - | chr1.2:50057573-50057592 | MS.gene30914:CDS | 20.0% |
!!! | AATTATGATGCTTTTAAAAG+CGG | - | chr1.2:50057599-50057618 | MS.gene30914:CDS | 20.0% |
! | AAGAAAAAGTCAGAAAATTC+AGG | - | chr1.2:50056429-50056448 | MS.gene30914:CDS | 25.0% |
! | AGATAAAGATGATACTAATG+AGG | - | chr1.2:50057196-50057215 | MS.gene30914:CDS | 25.0% |
! | TCATCTAACAATAAAATGTG+AGG | + | chr1.2:50058313-50058332 | None:intergenic | 25.0% |
! | TTAGAAACATCTTTACTACA+TGG | + | chr1.2:50056474-50056493 | None:intergenic | 25.0% |
! | TTTCAAACTTCATTTCTATC+GGG | - | chr1.2:50057574-50057593 | MS.gene30914:CDS | 25.0% |
!! | TAGTAAAGATGTTTCTAAGA+AGG | - | chr1.2:50056476-50056495 | MS.gene30914:CDS | 25.0% |
!!! | ATTATGATGCTTTTAAAAGC+GGG | - | chr1.2:50057600-50057619 | MS.gene30914:CDS | 25.0% |
!!! | TTCGAAGAAGATACTTTTTT+AGG | + | chr1.2:50056555-50056574 | None:intergenic | 25.0% |
AGAAATTGAAAGCAGCTAAA+AGG | - | chr1.2:50057672-50057691 | MS.gene30914:CDS | 30.0% | |
GTGCAAAACTTGGTAAATTT+GGG | - | chr1.2:50058197-50058216 | MS.gene30914:CDS | 30.0% | |
TATGAACAATTACACCTGAT+GGG | - | chr1.2:50057251-50057270 | MS.gene30914:CDS | 30.0% | |
TGAAGATATCTCATGGAAAA+CGG | - | chr1.2:50056946-50056965 | MS.gene30914:CDS | 30.0% | |
TTCAAACTTCATTTCTATCG+GGG | - | chr1.2:50057575-50057594 | MS.gene30914:CDS | 30.0% | |
TTCAACATTAGCTGAAACAA+CGG | + | chr1.2:50057114-50057133 | None:intergenic | 30.0% | |
! | CAAATTTACCAAGTTTTGCA+CGG | + | chr1.2:50058198-50058217 | None:intergenic | 30.0% |
!! | TAAAATGTGAGGTTTTGACA+TGG | + | chr1.2:50058302-50058321 | None:intergenic | 30.0% |
!!! | AAGCATCAAAGATTTTAGCT+GGG | - | chr1.2:50057294-50057313 | MS.gene30914:CDS | 30.0% |
AAATTCAGGACCATCTACAA+AGG | - | chr1.2:50056443-50056462 | MS.gene30914:CDS | 35.0% | |
AAATTTCCCTGGAACATTTG+AGG | - | chr1.2:50058498-50058517 | MS.gene30914:CDS | 35.0% | |
AAGTAAGGGAAAGTTTGATG+AGG | - | chr1.2:50057772-50057791 | MS.gene30914:CDS | 35.0% | |
ACACTTCTATATCTTCTAGC+TGG | - | chr1.2:50058010-50058029 | MS.gene30914:CDS | 35.0% | |
ACGTCAATATTCTTAGGTAC+TGG | + | chr1.2:50057041-50057060 | None:intergenic | 35.0% | |
AGAAGGACGTCAATATTCTT+AGG | + | chr1.2:50057047-50057066 | None:intergenic | 35.0% | |
AGAAGTCAGAAATTGAGGAT+AGG | - | chr1.2:50058064-50058083 | MS.gene30914:CDS | 35.0% | |
AGATGATACTAATGAGGAAG+AGG | - | chr1.2:50057202-50057221 | MS.gene30914:CDS | 35.0% | |
ATATCTCATGGAAAACGGTA+TGG | - | chr1.2:50056951-50056970 | MS.gene30914:CDS | 35.0% | |
ATGAACAATTACACCTGATG+GGG | - | chr1.2:50057252-50057271 | MS.gene30914:CDS | 35.0% | |
ATGAAGAACGGAGTCAAATA+TGG | - | chr1.2:50058452-50058471 | MS.gene30914:CDS | 35.0% | |
CGTGCAAAACTTGGTAAATT+TGG | - | chr1.2:50058196-50058215 | MS.gene30914:CDS | 35.0% | |
GAAGTCAGAAATTGAGGATA+GGG | - | chr1.2:50058065-50058084 | MS.gene30914:CDS | 35.0% | |
GCATCGAAAAGCAAAAGTAA+GGG | - | chr1.2:50057758-50057777 | MS.gene30914:CDS | 35.0% | |
GGAGGTAAATAAGAACTATG+AGG | - | chr1.2:50057640-50057659 | MS.gene30914:CDS | 35.0% | |
GTATGAACAATTACACCTGA+TGG | - | chr1.2:50057250-50057269 | MS.gene30914:CDS | 35.0% | |
GTCCTACAAAATCCTTTAGT+GGG | - | chr1.2:50057345-50057364 | MS.gene30914:CDS | 35.0% | |
GTGTTTCATCCATTGTTAGT+AGG | + | chr1.2:50058114-50058133 | None:intergenic | 35.0% | |
TAAGAATATTGACGTCCTTC+TGG | - | chr1.2:50057046-50057065 | MS.gene30914:CDS | 35.0% | |
TCATCGAGCAATAATAGAGT+GGG | + | chr1.2:50057416-50057435 | None:intergenic | 35.0% | |
TCCTACAAAATCCTTTAGTG+GGG | - | chr1.2:50057346-50057365 | MS.gene30914:CDS | 35.0% | |
TGAAGAACGGAGTCAAATAT+GGG | - | chr1.2:50058453-50058472 | MS.gene30914:CDS | 35.0% | |
TGGAACATTTGAGGATTACA+AGG | - | chr1.2:50058507-50058526 | MS.gene30914:CDS | 35.0% | |
TGTAATCCTCAAATGTTCCA+GGG | + | chr1.2:50058507-50058526 | None:intergenic | 35.0% | |
TGTCCTACAAAATCCTTTAG+TGG | - | chr1.2:50057344-50057363 | MS.gene30914:CDS | 35.0% | |
TTAATGTTGTCATCCCAAGT+CGG | - | chr1.2:50056814-50056833 | MS.gene30914:CDS | 35.0% | |
TTCATCGAGCAATAATAGAG+TGG | + | chr1.2:50057417-50057436 | None:intergenic | 35.0% | |
TTCCATATCCAGATGATTTG+TGG | + | chr1.2:50058338-50058357 | None:intergenic | 35.0% | |
TTCGAAGAAGTCAGAAATTG+AGG | - | chr1.2:50058059-50058078 | MS.gene30914:CDS | 35.0% | |
TTGTAATCCTCAAATGTTCC+AGG | + | chr1.2:50058508-50058527 | None:intergenic | 35.0% | |
! | AGCATCGAAAAGCAAAAGTA+AGG | - | chr1.2:50057757-50057776 | MS.gene30914:CDS | 35.0% |
! | ATATCTTCTAGCTGGTGATT+TGG | - | chr1.2:50058018-50058037 | MS.gene30914:CDS | 35.0% |
! | ATTGATTTCACGTGTGTGTA+AGG | - | chr1.2:50058429-50058448 | MS.gene30914:CDS | 35.0% |
! | CAAATATGGGTTGTTGAAGA+TGG | - | chr1.2:50058466-50058485 | MS.gene30914:CDS | 35.0% |
! | CATCTGGATATGGAAAGTAT+TGG | - | chr1.2:50058343-50058362 | MS.gene30914:CDS | 35.0% |
! | GGTTTTACAAAGGATATGCA+GGG | - | chr1.2:50057320-50057339 | MS.gene30914:CDS | 35.0% |
! | TCCATATCCAGATGATTTGT+GGG | + | chr1.2:50058337-50058356 | None:intergenic | 35.0% |
! | TTCATCCATACTTGCTAACA+TGG | + | chr1.2:50056520-50056539 | None:intergenic | 35.0% |
!! | CAAGCATCAAAGATTTTAGC+TGG | - | chr1.2:50057293-50057312 | MS.gene30914:CDS | 35.0% |
!! | GTTGATGTTGGCATTGATAT+GGG | - | chr1.2:50057944-50057963 | MS.gene30914:CDS | 35.0% |
!! | TATGGAAAGTATTGGTGCAT+TGG | - | chr1.2:50058351-50058370 | MS.gene30914:CDS | 35.0% |
!! | TGTTGATGTTGGCATTGATA+TGG | - | chr1.2:50057943-50057962 | MS.gene30914:CDS | 35.0% |
!! | TTGATGTTGGCATTGATATG+GGG | - | chr1.2:50057945-50057964 | MS.gene30914:CDS | 35.0% |
!!! | AGATATTTTAGCTGCCCATT+TGG | - | chr1.2:50056746-50056765 | MS.gene30914:CDS | 35.0% |
!!! | ATCAAAGATTTTAGCTGGGT+TGG | - | chr1.2:50057298-50057317 | MS.gene30914:CDS | 35.0% |
!!! | TCAAAGATTTTAGCTGGGTT+GGG | - | chr1.2:50057299-50057318 | MS.gene30914:CDS | 35.0% |
ACCCACAAATCATCTGGATA+TGG | - | chr1.2:50058333-50058352 | MS.gene30914:CDS | 40.0% | |
ACTAACAAGAACAACTCCAC+CGG | + | chr1.2:50058398-50058417 | None:intergenic | 40.0% | |
ACTCCCATTGTCAAACTATC+AGG | - | chr1.2:50058241-50058260 | MS.gene30914:CDS | 40.0% | |
ACTTCAATAAGCTGCAGAAG+TGG | + | chr1.2:50057881-50057900 | None:intergenic | 40.0% | |
AGACAAGGCTCAACAAGATA+AGG | - | chr1.2:50057700-50057719 | MS.gene30914:CDS | 40.0% | |
AGACTCTCAGATGTTGATGT+TGG | - | chr1.2:50057932-50057951 | MS.gene30914:CDS | 40.0% | |
AGATGAACCCACAAATCATC+TGG | - | chr1.2:50058327-50058346 | MS.gene30914:CDS | 40.0% | |
CACTAATCATCTTGACCTGA+GGG | - | chr1.2:50057439-50057458 | MS.gene30914:CDS | 40.0% | |
CCATTGTCAAACTATCAGGA+GGG | - | chr1.2:50058245-50058264 | MS.gene30914:CDS | 40.0% | |
CCTACAAAATCCTTTAGTGG+GGG | - | chr1.2:50057347-50057366 | MS.gene30914:CDS | 40.0% | |
CCTCCTGATAGTTTGACAAT+GGG | + | chr1.2:50058247-50058266 | None:intergenic | 40.0% | |
CTCAGGTCAAGATGATTAGT+GGG | + | chr1.2:50057440-50057459 | None:intergenic | 40.0% | |
CTGTAGTCTCTATACTTGTG+TGG | + | chr1.2:50057818-50057837 | None:intergenic | 40.0% | |
CTTTGTGGACCTACTAACAA+TGG | - | chr1.2:50058102-50058121 | MS.gene30914:CDS | 40.0% | |
GAGATATTCCCAACACTTTG+TGG | - | chr1.2:50058087-50058106 | MS.gene30914:CDS | 40.0% | |
GATCTACAAAATGCAGCTTC+AGG | - | chr1.2:50057161-50057180 | MS.gene30914:CDS | 40.0% | |
GATGCACTGCATAAATTCAC+CGG | - | chr1.2:50058376-50058395 | MS.gene30914:CDS | 40.0% | |
GCAAAGAAAGAAGCTCTTAG+AGG | - | chr1.2:50056777-50056796 | MS.gene30914:CDS | 40.0% | |
GCATCAGTGAAGATATCTCA+TGG | - | chr1.2:50056939-50056958 | MS.gene30914:CDS | 40.0% | |
GGAGTAAGATGGTTATGACT+AGG | + | chr1.2:50058226-50058245 | None:intergenic | 40.0% | |
GGTACTGTAAGAAATTTCCC+TGG | - | chr1.2:50058487-50058506 | MS.gene30914:CDS | 40.0% | |
GTGTGTGTAAGGATGAAGAA+CGG | - | chr1.2:50058440-50058459 | MS.gene30914:CDS | 40.0% | |
GTTTGACAATGGGAGTAAGA+TGG | + | chr1.2:50058237-50058256 | None:intergenic | 40.0% | |
TAATGTTGTCATCCCAAGTC+GGG | - | chr1.2:50056815-50056834 | MS.gene30914:CDS | 40.0% | |
TCAGTGTATGCAGAAGCTTT+CGG | + | chr1.2:50056600-50056619 | None:intergenic | 40.0% | |
TCATGGAAAACGGTATGGTT+TGG | - | chr1.2:50056956-50056975 | MS.gene30914:CDS | 40.0% | |
TCCGATTCATCATCATCAGA+GGG | + | chr1.2:50056639-50056658 | None:intergenic | 40.0% | |
TCTCAGAGCATACTGTATTG+AGG | + | chr1.2:50057538-50057557 | None:intergenic | 40.0% | |
TTAGTAGGTCCACAAAGTGT+TGG | + | chr1.2:50058099-50058118 | None:intergenic | 40.0% | |
TTCCGATTCATCATCATCAG+AGG | + | chr1.2:50056640-50056659 | None:intergenic | 40.0% | |
TTGAAAGCAGCTAAAAGGAC+TGG | - | chr1.2:50057677-50057696 | MS.gene30914:CDS | 40.0% | |
TTGACTTTCCCATTCCATTC+GGG | + | chr1.2:50056986-50057005 | None:intergenic | 40.0% | |
! | AATTTTTCTGTGTCTGCTCG+TGG | - | chr1.2:50056897-50056916 | MS.gene30914:CDS | 40.0% |
! | CATGGTTTAGCCTTTGTAGA+TGG | + | chr1.2:50056456-50056475 | None:intergenic | 40.0% |
! | GGGTTTTACAAAGGATATGC+AGG | - | chr1.2:50057319-50057338 | MS.gene30914:CDS | 40.0% |
! | GTAGATTTTCCAGCACCATT+AGG | + | chr1.2:50057992-50058011 | None:intergenic | 40.0% |
! | GTTGACTTTCCCATTCCATT+CGG | + | chr1.2:50056987-50057006 | None:intergenic | 40.0% |
! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr1.2:50058098-50058117 | None:intergenic | 40.0% |
! | TCCCTCTGATGATGATGAAT+CGG | - | chr1.2:50056635-50056654 | MS.gene30914:CDS | 40.0% |
! | TGATGATGATGAATCGGAAG+AGG | - | chr1.2:50056641-50056660 | MS.gene30914:CDS | 40.0% |
!! | ATGATGCTTTTAAAAGCGGG+TGG | - | chr1.2:50057603-50057622 | MS.gene30914:CDS | 40.0% |
!! | TGATGCTTTTAAAAGCGGGT+GGG | - | chr1.2:50057604-50057623 | MS.gene30914:CDS | 40.0% |
!!! | CACTTTTGAAGCTTCTTGCT+TGG | - | chr1.2:50057006-50057025 | MS.gene30914:CDS | 40.0% |
!!! | TTTTGAAGCTTCTTGCTTGG+AGG | - | chr1.2:50057009-50057028 | MS.gene30914:CDS | 40.0% |
AATGCAGCTTCAGGTGAAGA+AGG | - | chr1.2:50057170-50057189 | MS.gene30914:CDS | 45.0% | |
ACTAATGAGGAAGAGGATGC+AGG | - | chr1.2:50057209-50057228 | MS.gene30914:CDS | 45.0% | |
ACTTGTGTGGTACCTCTACT+TGG | + | chr1.2:50057805-50057824 | None:intergenic | 45.0% | |
AGCTAAAAGGACTGGAGACA+AGG | - | chr1.2:50057685-50057704 | MS.gene30914:CDS | 45.0% | |
CAAGTATAGAGACTACAGCG+TGG | - | chr1.2:50057820-50057839 | MS.gene30914:CDS | 45.0% | |
CCACTAATCATCTTGACCTG+AGG | - | chr1.2:50057438-50057457 | MS.gene30914:CDS | 45.0% | |
CCCATTGTCAAACTATCAGG+AGG | - | chr1.2:50058244-50058263 | MS.gene30914:CDS | 45.0% | |
CCCTCCTGATAGTTTGACAA+TGG | + | chr1.2:50058248-50058267 | None:intergenic | 45.0% | |
CCTCAGGTCAAGATGATTAG+TGG | + | chr1.2:50057441-50057460 | None:intergenic | 45.0% | |
CTCTGCCATGTTAGCAAGTA+TGG | - | chr1.2:50056512-50056531 | MS.gene30914:CDS | 45.0% | |
CTTCGAAGTTCACCTTCACT+TGG | + | chr1.2:50058046-50058065 | None:intergenic | 45.0% | |
CTTGTGTGGTACCTCTACTT+GGG | + | chr1.2:50057804-50057823 | None:intergenic | 45.0% | |
CTTTGCCTGTTCAGCCAAAT+GGG | + | chr1.2:50056763-50056782 | None:intergenic | 45.0% | |
GATTCATCATCATCAGAGGG+AGG | + | chr1.2:50056636-50056655 | None:intergenic | 45.0% | |
GGAGCATGAGCAAAGACATA+GGG | - | chr1.2:50056662-50056681 | MS.gene30914:CDS | 45.0% | |
GGCTCAACAAGATAAGGTGA+AGG | - | chr1.2:50057706-50057725 | MS.gene30914:CDS | 45.0% | |
GGGAAAGTTTGATGAGGATG+AGG | - | chr1.2:50057778-50057797 | MS.gene30914:CDS | 45.0% | |
TCAATAAGCTGCAGAAGTGG+CGG | + | chr1.2:50057878-50057897 | None:intergenic | 45.0% | |
TCAGCAATAGACACCTCAAG+TGG | + | chr1.2:50056699-50056718 | None:intergenic | 45.0% | |
TCGCTGGAAGAAAACTTTGG+TGG | - | chr1.2:50057490-50057509 | MS.gene30914:CDS | 45.0% | |
TCTTTGCCTGTTCAGCCAAA+TGG | + | chr1.2:50056764-50056783 | None:intergenic | 45.0% | |
! | AGGAGCATGAGCAAAGACAT+AGG | - | chr1.2:50056661-50056680 | MS.gene30914:CDS | 45.0% |
! | CCCCCACTAAAGGATTTTGT+AGG | + | chr1.2:50057350-50057369 | None:intergenic | 45.0% |
! | GTGTCGCTGGAAGAAAACTT+TGG | - | chr1.2:50057487-50057506 | MS.gene30914:CDS | 45.0% |
! | TGAGCTTTAGCTACCCAAAC+CGG | - | chr1.2:50057900-50057919 | MS.gene30914:CDS | 45.0% |
! | TTGGTTCTTGATGGAGACGA+TGG | - | chr1.2:50056840-50056859 | MS.gene30914:CDS | 45.0% |
!! | AGACGAAGAAGGTACTGAAC+AGG | + | chr1.2:50058136-50058155 | None:intergenic | 45.0% |
!! | AGCTGGGTTGGGTTTTACAA+AGG | - | chr1.2:50057310-50057329 | MS.gene30914:CDS | 45.0% |
!! | GGAAAACGGTATGGTTTGGT+TGG | - | chr1.2:50056960-50056979 | MS.gene30914:CDS | 45.0% |
!! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr1.2:50058031-50058050 | MS.gene30914:CDS | 45.0% |
!! | TAGAAGAGTACTTGTGTCGC+TGG | - | chr1.2:50057474-50057493 | MS.gene30914:CDS | 45.0% |
!!! | TTCGGAGCAGGTTTTGACTT+CGG | + | chr1.2:50056582-50056601 | None:intergenic | 45.0% |
AGCACCATTAGGCCCAACAA+TGG | + | chr1.2:50057981-50058000 | None:intergenic | 50.0% | |
ATTGTTGGGCCTAATGGTGC+TGG | - | chr1.2:50057980-50057999 | MS.gene30914:CDS | 50.0% | |
CAAAATCCTTTAGTGGGGGC+TGG | - | chr1.2:50057351-50057370 | MS.gene30914:CDS | 50.0% | |
CAAGAACCAAAGCCCGACTT+GGG | + | chr1.2:50056830-50056849 | None:intergenic | 50.0% | |
CTTGCTTACTAAGTCCCTCC+TGG | + | chr1.2:50058168-50058187 | None:intergenic | 50.0% | |
GCACTGCATAAATTCACCGG+TGG | - | chr1.2:50058379-50058398 | MS.gene30914:CDS | 50.0% | |
GCTCTGTAGGTTCAGGAAAG+TGG | + | chr1.2:50057850-50057869 | None:intergenic | 50.0% | |
GGACTCGTGTTGCCATTGTT+GGG | - | chr1.2:50057966-50057985 | MS.gene30914:CDS | 50.0% | |
GGAGGGACTTAGTAAGCAAG+AGG | - | chr1.2:50058168-50058187 | MS.gene30914:CDS | 50.0% | |
GGCTGATGTTAAGCCACTTG+AGG | - | chr1.2:50056683-50056702 | MS.gene30914:CDS | 50.0% | |
GTTGCCATTGTTGGGCCTAA+TGG | - | chr1.2:50057974-50057993 | MS.gene30914:CDS | 50.0% | |
TATCAGGAGGGCAGAAAGCT+CGG | - | chr1.2:50058257-50058276 | MS.gene30914:CDS | 50.0% | |
TATGCAGAAGCTTTCGGAGC+AGG | + | chr1.2:50056594-50056613 | None:intergenic | 50.0% | |
TCAAGAACCAAAGCCCGACT+TGG | + | chr1.2:50056831-50056850 | None:intergenic | 50.0% | |
TTACTAAGTCCCTCCTGGTC+TGG | + | chr1.2:50058163-50058182 | None:intergenic | 50.0% | |
! | AGTCTGAAATCCTCCCGGTT+TGG | + | chr1.2:50057917-50057936 | None:intergenic | 50.0% |
! | CTGAGAGTCTGAAATCCTCC+CGG | + | chr1.2:50057922-50057941 | None:intergenic | 50.0% |
! | GAGCTTTAGCTACCCAAACC+GGG | - | chr1.2:50057901-50057920 | MS.gene30914:CDS | 50.0% |
! | GTCTGAAATCCTCCCGGTTT+GGG | + | chr1.2:50057916-50057935 | None:intergenic | 50.0% |
! | TTGGTTGGCCCGAATGGAAT+GGG | - | chr1.2:50056975-50056994 | MS.gene30914:CDS | 50.0% |
! | TTTGGTTGGCCCGAATGGAA+TGG | - | chr1.2:50056974-50056993 | MS.gene30914:CDS | 50.0% |
!! | AGTCGGGCTTTGGTTCTTGA+TGG | - | chr1.2:50056831-50056850 | MS.gene30914:CDS | 50.0% |
!! | TATGGTTTGGTTGGCCCGAA+TGG | - | chr1.2:50056969-50056988 | MS.gene30914:CDS | 50.0% |
AATCCTTTAGTGGGGGCTGG+AGG | - | chr1.2:50057354-50057373 | MS.gene30914:CDS | 55.0% | |
AGCTGCCCATTTGGCTGAAC+AGG | - | chr1.2:50056755-50056774 | MS.gene30914:CDS | 55.0% | |
ATCAGGAGGGCAGAAAGCTC+GGG | - | chr1.2:50058258-50058277 | MS.gene30914:CDS | 55.0% | |
CGGGTGGGAACAACGTTGTA+GGG | - | chr1.2:50057619-50057638 | MS.gene30914:CDS | 55.0% | |
CTAACCAGAGAACAGCCCTC+AGG | + | chr1.2:50057457-50057476 | None:intergenic | 55.0% | |
CTACCTCCTGCTCAACCAGA+AGG | + | chr1.2:50057064-50057083 | None:intergenic | 55.0% | |
CTGGTTGAGCAGGAGGTAGT+TGG | - | chr1.2:50057065-50057084 | MS.gene30914:CDS | 55.0% | |
CTTTAGCTACCCAAACCGGG+AGG | - | chr1.2:50057904-50057923 | MS.gene30914:CDS | 55.0% | |
GAGGCTGTCCGTGCAAAACT+TGG | - | chr1.2:50058187-50058206 | MS.gene30914:CDS | 55.0% | |
GGGACTCGTGTTGCCATTGT+TGG | - | chr1.2:50057965-50057984 | MS.gene30914:CDS | 55.0% | |
GGTCTGGATGCAGACGAAGA+AGG | + | chr1.2:50058147-50058166 | None:intergenic | 55.0% | |
GGTGTGAGCTCTGTAGGTTC+AGG | + | chr1.2:50057857-50057876 | None:intergenic | 55.0% | |
GTGGGAACAACGTTGTAGGG+AGG | - | chr1.2:50057622-50057641 | MS.gene30914:CDS | 55.0% | |
TCTTCGTCTGCATCCAGACC+AGG | - | chr1.2:50058147-50058166 | MS.gene30914:CDS | 55.0% | |
TGAGGATGAGGCCCAAGTAG+AGG | - | chr1.2:50057790-50057809 | MS.gene30914:CDS | 55.0% | |
TGTCATCCCAAGTCGGGCTT+TGG | - | chr1.2:50056821-50056840 | MS.gene30914:CDS | 55.0% | |
TTGACCTGAGGGCTGTTCTC+TGG | - | chr1.2:50057450-50057469 | MS.gene30914:CDS | 55.0% | |
! | TGACGTCCTTCTGGTTGAGC+AGG | - | chr1.2:50057055-50057074 | MS.gene30914:CDS | 55.0% |
AGTGGCGGTGTGAGCTCTGT+AGG | + | chr1.2:50057863-50057882 | None:intergenic | 60.0% | |
CAGCAGCATCAGACCCCATC+AGG | + | chr1.2:50057268-50057287 | None:intergenic | 60.0% | |
CATCCTCCAGCCCCCACTAA+AGG | + | chr1.2:50057360-50057379 | None:intergenic | 60.0% | |
CGTCTGCATCCAGACCAGGA+GGG | - | chr1.2:50058151-50058170 | MS.gene30914:CDS | 60.0% | |
GCGGGTGGGAACAACGTTGT+AGG | - | chr1.2:50057618-50057637 | MS.gene30914:CDS | 60.0% | |
TCGTCTGCATCCAGACCAGG+AGG | - | chr1.2:50058150-50058169 | MS.gene30914:CDS | 60.0% | |
! | CGTCCTTCTGGTTGAGCAGG+AGG | - | chr1.2:50057058-50057077 | MS.gene30914:CDS | 60.0% |
AGGAGGGCAGAAAGCTCGGG+TGG | - | chr1.2:50058261-50058280 | MS.gene30914:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 50056423 | 50058570 | 50056423 | ID=MS.gene30914 |
chr1.2 | mRNA | 50056423 | 50058570 | 50056423 | ID=MS.gene30914.t1;Parent=MS.gene30914 |
chr1.2 | exon | 50056423 | 50058570 | 50056423 | ID=MS.gene30914.t1.exon1;Parent=MS.gene30914.t1 |
chr1.2 | CDS | 50056423 | 50058570 | 50056423 | ID=cds.MS.gene30914.t1;Parent=MS.gene30914.t1 |
Gene Sequence |
Protein sequence |