Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31429.t1 | XP_013465155.1 | 97.9 | 336 | 7 | 0 | 1 | 336 | 1 | 336 | 2.60E-174 | 621.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31429.t1 | Q9QYJ3 | 45.6 | 349 | 164 | 7 | 1 | 334 | 1 | 338 | 1.0e-73 | 278.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31429.t1 | A0A072VM07 | 97.9 | 336 | 7 | 0 | 1 | 336 | 1 | 336 | 1.9e-174 | 621.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052037 | MS.gene31429 | 0.826648 | 2.42E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene31429 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene053082 | MS.gene31429 | 0.800201 | 1.61E-48 | -1.69E-46 |
| MS.gene05308 | MS.gene31429 | 0.83738 | 5.38E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene31429 | 0.812074 | 5.09E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene31429 | 0.830225 | 3.31E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene31429 | 0.811139 | 8.13E-51 | -1.69E-46 |
| MS.gene058279 | MS.gene31429 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene058702 | MS.gene31429 | 0.806291 | 8.84E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene31429 | 0.811241 | 7.72E-51 | -1.69E-46 |
| MS.gene060527 | MS.gene31429 | 0.802363 | 5.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31429.t1 | MTR_2g090705 | 97.917 | 336 | 7 | 0 | 1 | 336 | 1 | 336 | 0.0 | 681 |
| MS.gene31429.t1 | MTR_4g078850 | 68.362 | 354 | 83 | 5 | 1 | 335 | 1 | 344 | 7.00e-173 | 484 |
| MS.gene31429.t1 | MTR_2g014470 | 67.049 | 349 | 91 | 4 | 1 | 335 | 1 | 339 | 1.89e-163 | 459 |
| MS.gene31429.t1 | MTR_4g015840 | 65.043 | 349 | 100 | 6 | 1 | 336 | 1 | 340 | 3.01e-157 | 444 |
| MS.gene31429.t1 | MTR_2g014480 | 56.734 | 349 | 120 | 5 | 1 | 328 | 1 | 339 | 6.44e-132 | 380 |
| MS.gene31429.t1 | MTR_3g108020 | 54.783 | 345 | 129 | 5 | 1 | 336 | 1 | 327 | 1.01e-124 | 361 |
| MS.gene31429.t1 | MTR_4g015840 | 60.324 | 247 | 81 | 4 | 102 | 335 | 20 | 262 | 1.82e-101 | 299 |
| MS.gene31429.t1 | MTR_5g037880 | 53.886 | 193 | 85 | 1 | 142 | 334 | 86 | 274 | 3.14e-69 | 218 |
| MS.gene31429.t1 | MTR_5g037880 | 56.000 | 75 | 26 | 1 | 4 | 71 | 5 | 79 | 1.52e-18 | 84.7 |
| MS.gene31429.t1 | MTR_3g437840 | 55.396 | 139 | 62 | 0 | 197 | 335 | 24 | 162 | 6.39e-52 | 169 |
| MS.gene31429.t1 | MTR_3g088140 | 44.134 | 179 | 99 | 1 | 157 | 334 | 175 | 353 | 6.72e-49 | 167 |
| MS.gene31429.t1 | MTR_7g109340 | 34.218 | 339 | 192 | 8 | 5 | 334 | 27 | 343 | 4.17e-48 | 165 |
| MS.gene31429.t1 | MTR_3g437360 | 50.633 | 158 | 77 | 1 | 156 | 312 | 174 | 331 | 4.67e-46 | 159 |
| MS.gene31429.t1 | MTR_2g006890 | 42.778 | 180 | 102 | 1 | 156 | 334 | 196 | 375 | 2.64e-45 | 159 |
| MS.gene31429.t1 | MTR_8g006430 | 31.566 | 396 | 157 | 11 | 5 | 334 | 15 | 362 | 5.36e-34 | 129 |
| MS.gene31429.t1 | MTR_3g437850 | 36.979 | 192 | 93 | 3 | 3 | 191 | 1 | 167 | 7.45e-33 | 120 |
| MS.gene31429.t1 | MTR_2g087660 | 41.379 | 145 | 83 | 1 | 192 | 334 | 214 | 358 | 6.85e-29 | 115 |
| MS.gene31429.t1 | MTR_2g087660 | 57.746 | 71 | 25 | 1 | 5 | 75 | 14 | 79 | 2.00e-11 | 65.1 |
| MS.gene31429.t1 | MTR_4g050420 | 41.379 | 145 | 83 | 1 | 192 | 334 | 212 | 356 | 7.59e-28 | 112 |
| MS.gene31429.t1 | MTR_5g065160 | 27.374 | 358 | 212 | 12 | 4 | 332 | 76 | 414 | 2.61e-22 | 97.4 |
| MS.gene31429.t1 | MTR_5g065160 | 27.374 | 358 | 212 | 12 | 4 | 332 | 83 | 421 | 3.48e-22 | 97.4 |
| MS.gene31429.t1 | MTR_3g027580 | 28.242 | 347 | 209 | 9 | 4 | 327 | 89 | 418 | 1.10e-20 | 92.8 |
| MS.gene31429.t1 | MTR_7g101070 | 56.522 | 69 | 29 | 1 | 4 | 72 | 358 | 425 | 6.11e-20 | 90.9 |
| MS.gene31429.t1 | MTR_4g023470 | 25.562 | 356 | 216 | 9 | 1 | 327 | 83 | 418 | 6.22e-19 | 87.4 |
| MS.gene31429.t1 | MTR_2g104030 | 42.609 | 115 | 44 | 3 | 4 | 118 | 70 | 162 | 1.03e-17 | 84.3 |
| MS.gene31429.t1 | MTR_3g087030 | 54.795 | 73 | 31 | 1 | 3 | 75 | 81 | 151 | 1.62e-17 | 83.6 |
| MS.gene31429.t1 | MTR_2g087660 | 42.857 | 98 | 54 | 1 | 192 | 287 | 214 | 311 | 3.75e-17 | 81.3 |
| MS.gene31429.t1 | MTR_2g087660 | 57.746 | 71 | 25 | 1 | 5 | 75 | 14 | 79 | 1.38e-11 | 65.1 |
| MS.gene31429.t1 | MTR_7g112360 | 53.030 | 66 | 28 | 1 | 5 | 67 | 17 | 82 | 4.31e-17 | 77.8 |
| MS.gene31429.t1 | MTR_7g112360 | 53.030 | 66 | 28 | 1 | 5 | 67 | 17 | 82 | 6.20e-17 | 76.3 |
| MS.gene31429.t1 | MTR_8g022310 | 49.275 | 69 | 30 | 1 | 4 | 67 | 10 | 78 | 1.64e-15 | 74.7 |
| MS.gene31429.t1 | MTR_8g022310 | 49.275 | 69 | 30 | 1 | 4 | 67 | 10 | 78 | 2.82e-15 | 73.6 |
| MS.gene31429.t1 | MTR_8g022310 | 49.275 | 69 | 30 | 1 | 4 | 67 | 10 | 78 | 3.63e-15 | 74.3 |
| MS.gene31429.t1 | MTR_8g022310 | 49.275 | 69 | 30 | 1 | 4 | 67 | 10 | 78 | 4.16e-15 | 73.6 |
| MS.gene31429.t1 | MTR_5g012530 | 45.946 | 74 | 38 | 1 | 4 | 75 | 12 | 85 | 2.62e-14 | 73.9 |
| MS.gene31429.t1 | MTR_5g065860 | 51.562 | 64 | 30 | 1 | 4 | 67 | 48 | 110 | 3.99e-14 | 69.3 |
| MS.gene31429.t1 | MTR_2g436560 | 36.641 | 131 | 59 | 4 | 4 | 125 | 104 | 219 | 1.10e-13 | 71.6 |
| MS.gene31429.t1 | MTR_1g110310 | 47.887 | 71 | 36 | 1 | 4 | 74 | 16 | 85 | 4.17e-13 | 70.1 |
| MS.gene31429.t1 | MTR_7g069480 | 47.143 | 70 | 35 | 1 | 3 | 72 | 26 | 93 | 4.64e-13 | 70.5 |
| MS.gene31429.t1 | MTR_4g085070 | 50.000 | 60 | 27 | 1 | 11 | 67 | 19 | 78 | 7.95e-13 | 65.9 |
| MS.gene31429.t1 | MTR_5g035770 | 46.575 | 73 | 38 | 1 | 4 | 76 | 25 | 96 | 1.63e-12 | 68.2 |
| MS.gene31429.t1 | MTR_6g027110 | 37.895 | 95 | 41 | 2 | 3 | 93 | 1 | 81 | 2.07e-12 | 64.3 |
| MS.gene31429.t1 | MTR_5g065160 | 49.231 | 65 | 32 | 1 | 4 | 68 | 82 | 145 | 2.54e-12 | 67.8 |
| MS.gene31429.t1 | MTR_5g065160 | 47.143 | 70 | 36 | 1 | 4 | 73 | 83 | 151 | 2.55e-12 | 67.8 |
| MS.gene31429.t1 | MTR_1g052110 | 47.692 | 65 | 33 | 1 | 6 | 70 | 40 | 103 | 3.88e-12 | 66.2 |
| MS.gene31429.t1 | MTR_6g027030 | 37.895 | 95 | 41 | 2 | 3 | 93 | 1 | 81 | 4.39e-12 | 65.1 |
| MS.gene31429.t1 | MTR_6g471050 | 33.117 | 154 | 64 | 5 | 30 | 183 | 7 | 121 | 4.50e-12 | 67.0 |
| MS.gene31429.t1 | MTR_7g092380 | 44.595 | 74 | 37 | 2 | 6 | 76 | 24 | 96 | 1.23e-11 | 64.7 |
| MS.gene31429.t1 | MTR_6g026940 | 42.029 | 69 | 36 | 1 | 3 | 67 | 1 | 69 | 1.36e-11 | 62.8 |
| MS.gene31429.t1 | MTR_1g029460 | 41.250 | 80 | 46 | 1 | 3 | 82 | 5 | 83 | 3.25e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31429.t1 | AT2G20560 | 71.053 | 342 | 85 | 3 | 1 | 334 | 1 | 336 | 7.95e-165 | 463 |
| MS.gene31429.t1 | AT4G28480 | 69.801 | 351 | 85 | 6 | 1 | 334 | 1 | 347 | 2.66e-157 | 444 |
| MS.gene31429.t1 | AT3G08910 | 65.179 | 336 | 103 | 4 | 1 | 336 | 1 | 322 | 1.33e-154 | 436 |
| MS.gene31429.t1 | AT5G01390 | 59.420 | 345 | 119 | 5 | 1 | 335 | 1 | 334 | 3.77e-142 | 405 |
| MS.gene31429.t1 | AT5G25530 | 55.556 | 360 | 115 | 6 | 1 | 336 | 1 | 339 | 1.23e-135 | 389 |
| MS.gene31429.t1 | AT5G25530 | 54.348 | 368 | 115 | 7 | 1 | 336 | 1 | 347 | 1.09e-132 | 382 |
| MS.gene31429.t1 | AT1G10350 | 52.857 | 350 | 149 | 5 | 1 | 336 | 1 | 348 | 9.71e-125 | 362 |
| MS.gene31429.t1 | AT3G47940 | 54.286 | 350 | 144 | 4 | 1 | 336 | 1 | 348 | 1.23e-119 | 349 |
| MS.gene31429.t1 | AT1G59725 | 56.083 | 337 | 140 | 4 | 1 | 336 | 1 | 330 | 1.89e-119 | 348 |
| MS.gene31429.t1 | AT5G01390 | 53.254 | 338 | 93 | 5 | 1 | 335 | 1 | 276 | 6.03e-116 | 337 |
| MS.gene31429.t1 | AT4G28480 | 55.718 | 341 | 92 | 10 | 1 | 334 | 1 | 289 | 8.47e-100 | 296 |
| MS.gene31429.t1 | AT2G20550 | 57.509 | 273 | 87 | 4 | 84 | 334 | 18 | 283 | 3.32e-91 | 274 |
| MS.gene31429.t1 | AT2G20550 | 57.509 | 273 | 87 | 4 | 84 | 334 | 18 | 283 | 3.32e-91 | 274 |
| MS.gene31429.t1 | AT5G01390 | 45.562 | 338 | 80 | 6 | 1 | 335 | 1 | 237 | 3.96e-86 | 259 |
| MS.gene31429.t1 | AT5G01390 | 54.369 | 206 | 73 | 4 | 1 | 196 | 1 | 195 | 8.66e-64 | 202 |
| MS.gene31429.t1 | AT1G44160 | 47.191 | 178 | 94 | 0 | 157 | 334 | 176 | 353 | 5.77e-50 | 170 |
| MS.gene31429.t1 | AT1G11040 | 40.884 | 181 | 107 | 0 | 154 | 334 | 252 | 432 | 7.06e-46 | 162 |
| MS.gene31429.t1 | AT3G62600 | 34.393 | 346 | 192 | 9 | 2 | 335 | 24 | 346 | 3.09e-44 | 155 |
| MS.gene31429.t1 | AT5G22060 | 33.067 | 375 | 176 | 10 | 5 | 334 | 15 | 359 | 3.05e-39 | 144 |
| MS.gene31429.t1 | AT3G44110 | 33.711 | 353 | 202 | 8 | 5 | 334 | 15 | 358 | 1.65e-38 | 142 |
| MS.gene31429.t1 | AT3G44110 | 32.822 | 326 | 187 | 8 | 5 | 307 | 15 | 331 | 1.65e-30 | 119 |
| MS.gene31429.t1 | AT5G48030 | 27.095 | 358 | 208 | 13 | 4 | 327 | 94 | 432 | 9.90e-23 | 99.0 |
| MS.gene31429.t1 | AT1G80030 | 43.651 | 126 | 47 | 5 | 4 | 129 | 75 | 176 | 4.19e-19 | 88.2 |
| MS.gene31429.t1 | AT1G80030 | 43.651 | 126 | 47 | 5 | 4 | 129 | 75 | 176 | 5.42e-19 | 88.2 |
| MS.gene31429.t1 | AT1G80030 | 43.651 | 126 | 47 | 5 | 4 | 129 | 75 | 176 | 5.42e-19 | 88.2 |
| MS.gene31429.t1 | AT1G80030 | 43.651 | 126 | 47 | 5 | 4 | 129 | 75 | 176 | 5.42e-19 | 88.2 |
| MS.gene31429.t1 | AT2G22360 | 55.405 | 74 | 31 | 1 | 3 | 76 | 85 | 156 | 6.78e-18 | 84.7 |
| MS.gene31429.t1 | AT4G39960 | 41.228 | 114 | 44 | 3 | 4 | 117 | 85 | 175 | 1.70e-17 | 83.6 |
| MS.gene31429.t1 | AT4G39960 | 41.228 | 114 | 44 | 3 | 4 | 117 | 85 | 175 | 1.70e-17 | 83.6 |
| MS.gene31429.t1 | AT5G03160 | 53.623 | 69 | 31 | 1 | 4 | 72 | 370 | 437 | 2.75e-17 | 82.8 |
| MS.gene31429.t1 | AT1G56300 | 53.030 | 66 | 28 | 1 | 5 | 67 | 14 | 79 | 8.12e-17 | 75.9 |
| MS.gene31429.t1 | AT1G56300 | 53.030 | 66 | 28 | 1 | 5 | 67 | 14 | 79 | 9.56e-17 | 77.0 |
| MS.gene31429.t1 | AT2G35720 | 41.975 | 81 | 45 | 1 | 4 | 82 | 15 | 95 | 3.54e-14 | 73.6 |
| MS.gene31429.t1 | AT5G16650 | 50.746 | 67 | 32 | 1 | 4 | 70 | 11 | 76 | 5.68e-14 | 69.3 |
| MS.gene31429.t1 | AT5G16650 | 51.562 | 64 | 30 | 1 | 4 | 67 | 11 | 73 | 7.27e-14 | 68.2 |
| MS.gene31429.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 3.87e-13 | 68.2 |
| MS.gene31429.t1 | AT3G17830 | 38.849 | 139 | 51 | 3 | 2 | 140 | 61 | 165 | 5.25e-13 | 70.1 |
| MS.gene31429.t1 | AT1G68370 | 47.887 | 71 | 36 | 1 | 4 | 74 | 17 | 86 | 9.14e-13 | 68.9 |
| MS.gene31429.t1 | AT2G41000 | 46.377 | 69 | 33 | 1 | 3 | 67 | 2 | 70 | 9.69e-13 | 66.2 |
| MS.gene31429.t1 | AT3G08970 | 48.000 | 75 | 35 | 2 | 3 | 77 | 26 | 96 | 1.02e-12 | 69.3 |
| MS.gene31429.t1 | AT3G08970 | 48.000 | 75 | 35 | 2 | 3 | 77 | 26 | 96 | 1.02e-12 | 69.3 |
| MS.gene31429.t1 | AT5G05750 | 34.266 | 143 | 73 | 4 | 4 | 146 | 114 | 235 | 1.05e-12 | 68.2 |
| MS.gene31429.t1 | AT5G06910 | 50.769 | 65 | 31 | 1 | 6 | 70 | 31 | 94 | 1.10e-12 | 67.8 |
| MS.gene31429.t1 | AT1G71000 | 46.970 | 66 | 32 | 1 | 5 | 67 | 9 | 74 | 3.19e-12 | 64.3 |
| MS.gene31429.t1 | AT2G21510 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 3.60e-12 | 67.0 |
| MS.gene31429.t1 | AT2G21510 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 3.60e-12 | 67.0 |
| MS.gene31429.t1 | AT1G59980 | 42.029 | 69 | 39 | 1 | 6 | 74 | 25 | 92 | 3.64e-12 | 67.0 |
| MS.gene31429.t1 | AT2G21510 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 4.28e-12 | 66.6 |
| MS.gene31429.t1 | AT2G21510 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 4.28e-12 | 66.6 |
| MS.gene31429.t1 | AT1G71000 | 46.970 | 66 | 32 | 1 | 5 | 67 | 9 | 74 | 5.40e-12 | 63.9 |
| MS.gene31429.t1 | AT2G21510 | 47.222 | 72 | 37 | 1 | 4 | 75 | 6 | 76 | 5.79e-12 | 66.2 |
| MS.gene31429.t1 | AT1G59980 | 42.029 | 69 | 39 | 1 | 6 | 74 | 25 | 92 | 6.18e-12 | 66.6 |
| MS.gene31429.t1 | AT3G14200 | 46.875 | 64 | 32 | 1 | 6 | 67 | 14 | 77 | 7.46e-12 | 64.7 |
| MS.gene31429.t1 | AT1G72416 | 45.455 | 66 | 34 | 1 | 4 | 67 | 5 | 70 | 1.48e-11 | 63.2 |
| MS.gene31429.t1 | AT5G49060 | 33.913 | 115 | 67 | 2 | 4 | 118 | 99 | 204 | 1.57e-11 | 65.1 |
| MS.gene31429.t1 | AT5G49060 | 33.913 | 115 | 67 | 2 | 4 | 118 | 99 | 204 | 1.57e-11 | 65.1 |
| MS.gene31429.t1 | AT1G72416 | 45.455 | 66 | 34 | 1 | 4 | 67 | 5 | 70 | 1.88e-11 | 62.8 |
| MS.gene31429.t1 | AT1G72416 | 45.455 | 66 | 34 | 1 | 4 | 67 | 5 | 70 | 1.94e-11 | 62.8 |
| MS.gene31429.t1 | AT5G37750 | 39.130 | 92 | 54 | 1 | 4 | 95 | 70 | 159 | 2.10e-11 | 63.5 |
| MS.gene31429.t1 | AT1G72416 | 45.455 | 66 | 34 | 1 | 4 | 67 | 5 | 70 | 2.71e-11 | 62.4 |
| MS.gene31429.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 2.95e-11 | 60.5 |
| MS.gene31429.t1 | AT2G33735 | 43.077 | 65 | 36 | 1 | 4 | 68 | 22 | 85 | 2.95e-11 | 60.5 |
| MS.gene31429.t1 | AT1G24120 | 41.892 | 74 | 42 | 1 | 4 | 77 | 20 | 92 | 3.47e-11 | 64.3 |
| MS.gene31429.t1 | AT4G19570 | 51.515 | 66 | 30 | 1 | 3 | 68 | 65 | 128 | 3.86e-11 | 64.3 |
Find 95 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGAGATTTGCTTAAATT+TGG | 0.199073 | 2.4:+9776013 | None:intergenic |
| ATATCAGCAGGTATTGTATT+TGG | 0.234873 | 2.4:+9773381 | None:intergenic |
| CCCTTCTTTGTCGGATCCTT+TGG | 0.285013 | 2.4:+9773150 | None:intergenic |
| AGAGCTGTTTATGATCAATA+TGG | 0.297643 | 2.4:-9775828 | MS.gene31429:CDS |
| TCTCTTGAGGATATATATAA+AGG | 0.307635 | 2.4:-9775513 | MS.gene31429:CDS |
| GGATGTTCATTTCCCTTCTC+AGG | 0.314566 | 2.4:+9773402 | None:intergenic |
| GGCAGTGGCATTCCTTCTCT+TGG | 0.314961 | 2.4:+9773171 | None:intergenic |
| TTTCTTCAAGTCATCGTCTT+TGG | 0.326757 | 2.4:+9776103 | None:intergenic |
| CTCAAGTTTCCCTTCTTTGT+CGG | 0.340852 | 2.4:+9773141 | None:intergenic |
| TTGTTATTAGGGTTCTTATC+AGG | 0.352145 | 2.4:+9776050 | None:intergenic |
| AGAGGTAGCAATGGCATGTT+TGG | 0.355428 | 2.4:-9775624 | MS.gene31429:CDS |
| GGTGATCTTCATCTTCTTAG+TGG | 0.355739 | 2.4:+9775488 | None:intergenic |
| CTACCAGAGGCATGAGAATC+AGG | 0.390225 | 2.4:+9775771 | None:intergenic |
| TTTGTCCCCTTCTTCCATCC+AGG | 0.403890 | 2.4:+9773435 | None:intergenic |
| GGAATGGGAGGGATGGGAAG+AGG | 0.407566 | 2.4:-9775642 | MS.gene31429:CDS |
| CGAAATCCCTTTGGTGGAAT+GGG | 0.411716 | 2.4:-9775657 | MS.gene31429:CDS |
| CTTATCAGGATGCCACTTCA+TGG | 0.411951 | 2.4:+9776064 | None:intergenic |
| TGATCCGAAGTGAGCCGAGC+TGG | 0.421838 | 2.4:+9773096 | None:intergenic |
| CATAGCAACTTGTTCTCAAT+AGG | 0.429977 | 2.4:+9775537 | None:intergenic |
| GTGAATCTCACCACACTTGA+TGG | 0.434303 | 2.4:-9773252 | MS.gene31429:CDS |
| GAGCTGTTTATGATCAATAT+GGG | 0.439767 | 2.4:-9775827 | MS.gene31429:CDS |
| TTTGGGGATCGAAATCCCTT+TGG | 0.447674 | 2.4:-9775666 | MS.gene31429:CDS |
| TATGATCAATATGGGGAAGA+TGG | 0.451224 | 2.4:-9775819 | MS.gene31429:CDS |
| CTCTTGAGGATATATATAAA+GGG | 0.453643 | 2.4:-9775512 | MS.gene31429:CDS |
| GATTCTCATGCCTCTGGTAG+TGG | 0.458632 | 2.4:-9775768 | MS.gene31429:CDS |
| AACTGATACGGAAAGTCATC+AGG | 0.458809 | 2.4:+9775726 | None:intergenic |
| TCGAAATCCCTTTGGTGGAA+TGG | 0.459463 | 2.4:-9775658 | MS.gene31429:CDS |
| GGGGATCGAAATCCCTTTGG+TGG | 0.482474 | 2.4:-9775663 | MS.gene31429:CDS |
| GTCAAACCTGGATGGAAGAA+GGG | 0.491815 | 2.4:-9773441 | MS.gene31429:CDS |
| TATGGTGATGCTGGAGGAAG+TGG | 0.494603 | 2.4:-9775597 | MS.gene31429:CDS |
| TTCTCTTGCAGAAGCTTTAG+CGG | 0.499981 | 2.4:-9773283 | MS.gene31429:CDS |
| ACTGTGATCAAGAATTTCTC+TGG | 0.501571 | 2.4:+9775467 | None:intergenic |
| CTTTGGTGGAATGGGAGGGA+TGG | 0.502219 | 2.4:-9775649 | MS.gene31429:CDS |
| TTTGGTGGAATGGGAGGGAT+GGG | 0.503447 | 2.4:-9775648 | MS.gene31429:CDS |
| TGTCAAACCTGGATGGAAGA+AGG | 0.504580 | 2.4:-9773442 | MS.gene31429:CDS |
| TTTGGATCCTATGGTGATGC+TGG | 0.505971 | 2.4:-9775606 | MS.gene31429:CDS |
| ATCCCTCCCATTCCACCAAA+GGG | 0.515203 | 2.4:+9775651 | None:intergenic |
| GATGTTCATTTCCCTTCTCA+GGG | 0.518559 | 2.4:+9773403 | None:intergenic |
| TTTGTCGGATCCTTTGGCAG+TGG | 0.522236 | 2.4:+9773156 | None:intergenic |
| GCCAAAGGATCCGACAAAGA+AGG | 0.525394 | 2.4:-9773151 | MS.gene31429:CDS |
| GTCCGATGATTGAACTGATA+CGG | 0.527889 | 2.4:+9775714 | None:intergenic |
| ATGATCAATATGGGGAAGAT+GGG | 0.529413 | 2.4:-9775818 | MS.gene31429:CDS |
| CCACCTGATTCTCATGCCTC+TGG | 0.530969 | 2.4:-9775774 | MS.gene31429:CDS |
| AATGGCATGTTTGGATCCTA+TGG | 0.531436 | 2.4:-9775615 | MS.gene31429:CDS |
| AAAGATCACTTTCCCTGAGA+AGG | 0.531484 | 2.4:-9773415 | MS.gene31429:CDS |
| TCTCTTGCAGAAGCTTTAGC+GGG | 0.533366 | 2.4:-9773282 | MS.gene31429:CDS |
| ACAAGCTTCTGCAGGTTGAT+CGG | 0.533594 | 2.4:-9776130 | MS.gene31429:CDS |
| CCAAAGGATCCGACAAAGAA+GGG | 0.535124 | 2.4:-9773150 | MS.gene31429:CDS |
| ATGACGAAAATGATATCAGC+AGG | 0.540912 | 2.4:+9773369 | None:intergenic |
| GCATGAGAATCAGGTGGTGG+TGG | 0.542892 | 2.4:+9775780 | None:intergenic |
| AGAAGGAATGCCACTGCCAA+AGG | 0.547658 | 2.4:-9773166 | MS.gene31429:CDS |
| GATCCGAAGTGAGCCGAGCT+GGG | 0.548429 | 2.4:+9773097 | None:intergenic |
| CATCCCTCCCATTCCACCAA+AGG | 0.550801 | 2.4:+9775650 | None:intergenic |
| ATATGGGGAAGATGGGCTGA+AGG | 0.551422 | 2.4:-9775811 | MS.gene31429:CDS |
| CTCACTTCGGATCAGAAGGC+AGG | 0.551807 | 2.4:-9773087 | MS.gene31429:CDS |
| GGAATGAAGAAAGTCTTGGC+TGG | 0.552067 | 2.4:-9773066 | MS.gene31429:CDS |
| TCGGCTCACTTCGGATCAGA+AGG | 0.554858 | 2.4:-9773091 | MS.gene31429:CDS |
| TTCCGTATCAGTTCAATCAT+CGG | 0.556341 | 2.4:-9775716 | MS.gene31429:CDS |
| GTGCAGCAAAGTCACATCGC+TGG | 0.559149 | 2.4:-9773484 | MS.gene31429:intron |
| GCATCAAGGTCCTCCTCGTA+AGG | 0.559593 | 2.4:-9775565 | MS.gene31429:CDS |
| ACAGAAAACTCGCCATGAAG+TGG | 0.563345 | 2.4:-9776076 | MS.gene31429:CDS |
| CACAATGTGTTCACTCGTGA+AGG | 0.567306 | 2.4:-9773333 | MS.gene31429:CDS |
| GGAACAACCTCTTCATACTC+AGG | 0.573763 | 2.4:+9773192 | None:intergenic |
| AATCCCTTTGGTGGAATGGG+AGG | 0.575318 | 2.4:-9775654 | MS.gene31429:CDS |
| AGCAACTTGTTCTCAATAGG+AGG | 0.576683 | 2.4:+9775540 | None:intergenic |
| AAGATCACTTTCCCTGAGAA+GGG | 0.579865 | 2.4:-9773414 | MS.gene31429:CDS |
| CAATTAGTGTCAAACCTGGA+TGG | 0.581052 | 2.4:-9773449 | MS.gene31429:CDS |
| GGCAGGAATGAAGAAAGTCT+TGG | 0.581140 | 2.4:-9773070 | MS.gene31429:CDS |
| GAGAAATTCTTGATCACAGT+GGG | 0.581668 | 2.4:-9775464 | MS.gene31429:intron |
| TCACGAGTGAACACATTGTG+TGG | 0.583017 | 2.4:+9773336 | None:intergenic |
| ACTTCCTCCAGCATCACCAT+AGG | 0.584524 | 2.4:+9775599 | None:intergenic |
| TCAACGTCAAATTCCCAGCT+CGG | 0.584854 | 2.4:-9773110 | MS.gene31429:CDS |
| TATGGGGAAGATGGGCTGAA+GGG | 0.585281 | 2.4:-9775810 | MS.gene31429:CDS |
| TGACTACTACAAGCTTCTGC+AGG | 0.587066 | 2.4:-9776138 | MS.gene31429:CDS |
| ATTCCCAGCTCGGCTCACTT+CGG | 0.588709 | 2.4:-9773100 | MS.gene31429:CDS |
| GAAGAGGTTGTTCCAAGAGA+AGG | 0.589371 | 2.4:-9773183 | MS.gene31429:CDS |
| TTGACAATTAGTGTCAAACC+TGG | 0.594845 | 2.4:-9773453 | MS.gene31429:CDS |
| AGTGGAGTCAATGTGCATCA+AGG | 0.595190 | 2.4:-9775579 | MS.gene31429:CDS |
| TCTCATGCCTCTGGTAGTGG+TGG | 0.595916 | 2.4:-9775765 | MS.gene31429:CDS |
| ATCCCTTTGGTGGAATGGGA+GGG | 0.596841 | 2.4:-9775653 | MS.gene31429:CDS |
| GAGGCATGAGAATCAGGTGG+TGG | 0.609693 | 2.4:+9775777 | None:intergenic |
| CGACAAAGAAGGGAAACTTG+AGG | 0.610086 | 2.4:-9773140 | MS.gene31429:CDS |
| TCAAACCTGGATGGAAGAAG+GGG | 0.618407 | 2.4:-9773440 | MS.gene31429:CDS |
| TCAATAGGAGGCGCCTTACG+AGG | 0.622058 | 2.4:+9775552 | None:intergenic |
| CAAATTTCTACCATCAAGTG+TGG | 0.635207 | 2.4:+9773242 | None:intergenic |
| GGGATGGGAAGAGGTAGCAA+TGG | 0.641843 | 2.4:-9775633 | MS.gene31429:CDS |
| GGATCCTATGGTGATGCTGG+AGG | 0.665018 | 2.4:-9775603 | MS.gene31429:CDS |
| CTTGTAGTAGTCAACACCCA+TGG | 0.668721 | 2.4:+9776148 | None:intergenic |
| ATAGGAGGCGCCTTACGAGG+AGG | 0.673195 | 2.4:+9775555 | None:intergenic |
| TGTTCATCCTGAGTATGAAG+AGG | 0.673826 | 2.4:-9773199 | MS.gene31429:CDS |
| CAAGTTGCTATGCTCTCTTG+AGG | 0.674506 | 2.4:-9775526 | MS.gene31429:CDS |
| AGCTGTTTATGATCAATATG+GGG | 0.674859 | 2.4:-9775826 | MS.gene31429:CDS |
| TCTACTACCACCACTACCAG+AGG | 0.706463 | 2.4:+9775758 | None:intergenic |
| CCAGAGGCATGAGAATCAGG+TGG | 0.707871 | 2.4:+9775774 | None:intergenic |
| AGAGAAATTCTTGATCACAG+TGG | 0.741173 | 2.4:-9775465 | MS.gene31429:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGAACATTTTTTTTTTT+TGG | - | chr2.4:9774630-9774649 | MS.gene31429:intron | 10.0% |
| !!! | AATTTAAAATTTTGAAAAAG+TGG | + | chr2.4:9774794-9774813 | None:intergenic | 10.0% |
| !!! | ATAGAACATTTTTTTTTTTT+GGG | - | chr2.4:9774631-9774650 | MS.gene31429:intron | 10.0% |
| !!! | ATTTAAAATTTTGAAAAAGT+GGG | + | chr2.4:9774793-9774812 | None:intergenic | 10.0% |
| !! | TAAACAATTACTATAATTCT+AGG | + | chr2.4:9774479-9774498 | None:intergenic | 15.0% |
| !! | TATAAATATCTAATAACTGA+TGG | + | chr2.4:9773821-9773840 | None:intergenic | 15.0% |
| !! | TATAAATCAACATTATGATA+TGG | + | chr2.4:9775072-9775091 | None:intergenic | 15.0% |
| !!! | ATGATGTAAGTTTTTTTTAA+AGG | - | chr2.4:9773222-9773241 | MS.gene31429:CDS | 15.0% |
| !!! | CTTAAATTTTCAATTTTTAG+TGG | - | chr2.4:9773249-9773268 | MS.gene31429:CDS | 15.0% |
| !!! | TGATGTAAGTTTTTTTTAAA+GGG | - | chr2.4:9773223-9773242 | MS.gene31429:CDS | 15.0% |
| !! | AAAAAAACAAAGTCATCAAT+AGG | + | chr2.4:9775691-9775710 | None:intergenic | 20.0% |
| !! | AAAAAACAAAGTCATCAATA+GGG | + | chr2.4:9775690-9775709 | None:intergenic | 20.0% |
| !! | ATTCTAGATGTTTAAATTAG+AGG | + | chr2.4:9775595-9775614 | None:intergenic | 20.0% |
| !! | GTTCTATTAGAAAAAATTCA+AGG | + | chr2.4:9774618-9774637 | None:intergenic | 20.0% |
| !! | TGATTTATAGTAGTATGTTT+GGG | - | chr2.4:9775083-9775102 | MS.gene31429:intron | 20.0% |
| !! | TGGTAACTATTGTTATAAAT+TGG | - | chr2.4:9774925-9774944 | MS.gene31429:intron | 20.0% |
| !! | TTGATTTATAGTAGTATGTT+TGG | - | chr2.4:9775082-9775101 | MS.gene31429:intron | 20.0% |
| !!! | AACATTTTTTTTTTTTGGGT+AGG | - | chr2.4:9774635-9774654 | MS.gene31429:intron | 20.0% |
| !!! | ACATTTTTTTTTTTTGGGTA+GGG | - | chr2.4:9774636-9774655 | MS.gene31429:intron | 20.0% |
| !!! | ATATTTTTGCTGAGTTTTTT+GGG | - | chr2.4:9773525-9773544 | MS.gene31429:intron | 20.0% |
| !!! | GGAATTTGTTTTTTGTTATT+AGG | - | chr2.4:9773337-9773356 | MS.gene31429:CDS | 20.0% |
| !!! | TTGATGTTTTTCTAGTATAA+TGG | - | chr2.4:9775542-9775561 | MS.gene31429:CDS | 20.0% |
| ! | AATACTAGATTTGTGATGTT+TGG | - | chr2.4:9775114-9775133 | MS.gene31429:intron | 25.0% |
| ! | AGAGTTCTATTGGTATAAAT+TGG | - | chr2.4:9774905-9774924 | MS.gene31429:intron | 25.0% |
| ! | ATAATATTAGATAGAGAGTG+GGG | - | chr2.4:9774031-9774050 | MS.gene31429:intron | 25.0% |
| ! | ATTTATAGTAGTATGTTTGG+GGG | - | chr2.4:9775085-9775104 | MS.gene31429:intron | 25.0% |
| ! | CATAATATTAGATAGAGAGT+GGG | - | chr2.4:9774030-9774049 | MS.gene31429:intron | 25.0% |
| ! | CTCTTGAGGATATATATAAA+GGG | - | chr2.4:9773696-9773715 | MS.gene31429:intron | 25.0% |
| ! | GAACCATCAATACTTAAAAT+TGG | + | chr2.4:9774553-9774572 | None:intergenic | 25.0% |
| ! | GATATTAATACAGACTAACA+TGG | + | chr2.4:9775573-9775592 | None:intergenic | 25.0% |
| ! | GATTTATAGTAGTATGTTTG+GGG | - | chr2.4:9775084-9775103 | MS.gene31429:intron | 25.0% |
| ! | TAATGAGTTGTATCGAAATA+TGG | - | chr2.4:9774238-9774257 | MS.gene31429:intron | 25.0% |
| ! | TCATAATATTAGATAGAGAG+TGG | - | chr2.4:9774029-9774048 | MS.gene31429:intron | 25.0% |
| ! | TCTCTTGAGGATATATATAA+AGG | - | chr2.4:9773695-9773714 | MS.gene31429:intron | 25.0% |
| ! | TTGTATCGAAATATGGTTTA+TGG | - | chr2.4:9774245-9774264 | MS.gene31429:intron | 25.0% |
| !! | AAAGTTTCAATTTTTGCATC+TGG | - | chr2.4:9773294-9773313 | MS.gene31429:CDS | 25.0% |
| !! | AAGTTTCAATTTTTGCATCT+GGG | - | chr2.4:9773295-9773314 | MS.gene31429:CDS | 25.0% |
| !! | TGTCATAAACTTTTTGTATC+TGG | - | chr2.4:9775194-9775213 | MS.gene31429:intron | 25.0% |
| !! | TTAAACTGTTGTTATTGCTA+GGG | - | chr2.4:9775516-9775535 | MS.gene31429:CDS | 25.0% |
| !! | TTTAAACTGTTGTTATTGCT+AGG | - | chr2.4:9775515-9775534 | MS.gene31429:CDS | 25.0% |
| !!! | CAGCTTCTTTTTTGTTATTA+GGG | + | chr2.4:9773172-9773191 | None:intergenic | 25.0% |
| !!! | GATATTTTTGCTGAGTTTTT+TGG | - | chr2.4:9773524-9773543 | MS.gene31429:intron | 25.0% |
| !!! | TATTTTTGCTGAGTTTTTTG+GGG | - | chr2.4:9773526-9773545 | MS.gene31429:intron | 25.0% |
| !!! | TCAGCTTCTTTTTTGTTATT+AGG | + | chr2.4:9773173-9773192 | None:intergenic | 25.0% |
| !!! | TCTGGTTTTTGAGATTATAT+TGG | - | chr2.4:9775212-9775231 | MS.gene31429:intron | 25.0% |
| !!! | TTCTGAGATTTGCTTAAATT+TGG | + | chr2.4:9773198-9773217 | None:intergenic | 25.0% |
| AACTCAGCAAAAATATCATC+AGG | + | chr2.4:9773521-9773540 | None:intergenic | 30.0% | |
| AGAGCTGTTTATGATCAATA+TGG | - | chr2.4:9773380-9773399 | MS.gene31429:CDS | 30.0% | |
| AGCTGTTTATGATCAATATG+GGG | - | chr2.4:9773382-9773401 | MS.gene31429:CDS | 30.0% | |
| ATACTTAAAATTGGAGGAAG+AGG | + | chr2.4:9774544-9774563 | None:intergenic | 30.0% | |
| ATAGACAATAAGTAGCTTCT+TGG | - | chr2.4:9775012-9775031 | MS.gene31429:intron | 30.0% | |
| ATATGAAGCTAGAGTTCTAT+TGG | - | chr2.4:9774895-9774914 | MS.gene31429:intron | 30.0% | |
| ATCTGCTTCTTTATTGAAAG+AGG | - | chr2.4:9774446-9774465 | MS.gene31429:intron | 30.0% | |
| ATGCATGATATCTCTCATTA+TGG | - | chr2.4:9775643-9775662 | MS.gene31429:CDS | 30.0% | |
| ATTAAACAAGAGAAGGACAA+CGG | + | chr2.4:9775403-9775422 | None:intergenic | 30.0% | |
| ATTGCTGAGATTTACATGTT+TGG | - | chr2.4:9773880-9773899 | MS.gene31429:intron | 30.0% | |
| CCATCAATACTTAAAATTGG+AGG | + | chr2.4:9774550-9774569 | None:intergenic | 30.0% | |
| GAGCTGTTTATGATCAATAT+GGG | - | chr2.4:9773381-9773400 | MS.gene31429:CDS | 30.0% | |
| TAATATTAGATAGAGAGTGG+GGG | - | chr2.4:9774032-9774051 | MS.gene31429:intron | 30.0% | |
| TAGAAAAGATTGTGGGAAAT+AGG | - | chr2.4:9774067-9774086 | MS.gene31429:intron | 30.0% | |
| TCCTATTTCATTATAGTCCA+GGG | - | chr2.4:9775235-9775254 | MS.gene31429:intron | 30.0% | |
| TCTCTTGCTTAATGTTACAA+TGG | - | chr2.4:9775320-9775339 | MS.gene31429:intron | 30.0% | |
| TGGATGAAATAGCAAAAACA+TGG | + | chr2.4:9774355-9774374 | None:intergenic | 30.0% | |
| TTGTAACATTAAGCAAGAGA+AGG | + | chr2.4:9775320-9775339 | None:intergenic | 30.0% | |
| ! | AACATCTAGAATTCGAGATA+AGG | - | chr2.4:9775603-9775622 | MS.gene31429:CDS | 30.0% |
| ! | ACAGCATTGAAAAAAGAACT+AGG | + | chr2.4:9773790-9773809 | None:intergenic | 30.0% |
| ! | ACATCTAGAATTCGAGATAA+GGG | - | chr2.4:9775604-9775623 | MS.gene31429:CDS | 30.0% |
| ! | ATAGAACTCTAGCTTCATAT+CGG | + | chr2.4:9774895-9774914 | None:intergenic | 30.0% |
| ! | ATATCAGCAGGTATTGTATT+TGG | + | chr2.4:9775830-9775849 | None:intergenic | 30.0% |
| ! | CCTTCTCTTGTTTAATGTTA+CGG | - | chr2.4:9775407-9775426 | MS.gene31429:intron | 30.0% |
| ! | TTGTTATTAGGGTTCTTATC+AGG | + | chr2.4:9773161-9773180 | None:intergenic | 30.0% |
| !!! | CCTCCAATTTTAAGTATTGA+TGG | - | chr2.4:9774547-9774566 | MS.gene31429:intron | 30.0% |
| AAACATTCAATCTGACGTGT+CGG | + | chr2.4:9774708-9774727 | None:intergenic | 35.0% | |
| AAAGTAGCTCAGTTTCAGTT+TGG | - | chr2.4:9773844-9773863 | MS.gene31429:intron | 35.0% | |
| ACCCATAGTAGAAAAGATTG+TGG | - | chr2.4:9774059-9774078 | MS.gene31429:intron | 35.0% | |
| ACCTGTACTGTAGATTATGT+AGG | - | chr2.4:9774119-9774138 | MS.gene31429:intron | 35.0% | |
| ACTGTGATCAAGAATTTCTC+TGG | + | chr2.4:9773744-9773763 | None:intergenic | 35.0% | |
| AGAGAAATTCTTGATCACAG+TGG | - | chr2.4:9773743-9773762 | MS.gene31429:intron | 35.0% | |
| ATCCCAAACAATATGCACAA+TGG | + | chr2.4:9775490-9775509 | None:intergenic | 35.0% | |
| ATGACGAAAATGATATCAGC+AGG | + | chr2.4:9775842-9775861 | None:intergenic | 35.0% | |
| ATGATCAATATGGGGAAGAT+GGG | - | chr2.4:9773390-9773409 | MS.gene31429:CDS | 35.0% | |
| ATTGTGCATATTGTTTGGGA+TGG | - | chr2.4:9775489-9775508 | MS.gene31429:CDS | 35.0% | |
| CAAATTTCTACCATCAAGTG+TGG | + | chr2.4:9775969-9775988 | None:intergenic | 35.0% | |
| CAATGCTTCATAGGTTAACA+TGG | - | chr2.4:9774869-9774888 | MS.gene31429:intron | 35.0% | |
| CATTGAAAAAAGAACTAGGC+AGG | + | chr2.4:9773786-9773805 | None:intergenic | 35.0% | |
| CCCATAGTAGAAAAGATTGT+GGG | - | chr2.4:9774060-9774079 | MS.gene31429:intron | 35.0% | |
| CCGTAACATTAAACAAGAGA+AGG | + | chr2.4:9775410-9775429 | None:intergenic | 35.0% | |
| GAGAAATTCTTGATCACAGT+GGG | - | chr2.4:9773744-9773763 | MS.gene31429:intron | 35.0% | |
| GTACTGTAGATTATGTAGGA+AGG | - | chr2.4:9774123-9774142 | MS.gene31429:intron | 35.0% | |
| GTCCTATTTCATTATAGTCC+AGG | - | chr2.4:9775234-9775253 | MS.gene31429:intron | 35.0% | |
| GTGTGACATGTATCACTATA+TGG | - | chr2.4:9774737-9774756 | MS.gene31429:intron | 35.0% | |
| TAATTGGAGAAGAGACTGAT+TGG | - | chr2.4:9773969-9773988 | MS.gene31429:intron | 35.0% | |
| TATGATCAATATGGGGAAGA+TGG | - | chr2.4:9773389-9773408 | MS.gene31429:CDS | 35.0% | |
| TCCCAAACAATATGCACAAT+GGG | + | chr2.4:9775489-9775508 | None:intergenic | 35.0% | |
| TCCCTGGACTATAATGAAAT+AGG | + | chr2.4:9775239-9775258 | None:intergenic | 35.0% | |
| TCCTACATAATCTACAGTAC+AGG | + | chr2.4:9774123-9774142 | None:intergenic | 35.0% | |
| TGCTTAATGTTACAATGGCT+TGG | - | chr2.4:9775325-9775344 | MS.gene31429:intron | 35.0% | |
| TGTAGCATTGCTAGATTTAC+AGG | - | chr2.4:9773917-9773936 | MS.gene31429:intron | 35.0% | |
| TGTCTATGTCAATGCTTCAT+AGG | - | chr2.4:9774860-9774879 | MS.gene31429:intron | 35.0% | |
| TGTTAAACGGGATCAATAAC+TGG | - | chr2.4:9775352-9775371 | MS.gene31429:intron | 35.0% | |
| TTAAAATTGGAGGAAGAGGA+AGG | + | chr2.4:9774540-9774559 | None:intergenic | 35.0% | |
| TTAAACAAGAGAAGGACAAC+GGG | + | chr2.4:9775402-9775421 | None:intergenic | 35.0% | |
| TTCCGTATCAGTTCAATCAT+CGG | - | chr2.4:9773492-9773511 | MS.gene31429:intron | 35.0% | |
| TTGACAATTAGTGTCAAACC+TGG | - | chr2.4:9775755-9775774 | MS.gene31429:CDS | 35.0% | |
| TTTCTTCAAGTCATCGTCTT+TGG | + | chr2.4:9773108-9773127 | None:intergenic | 35.0% | |
| ! | AAGTCTTATCTCACTTAGTG+GGG | + | chr2.4:9774294-9774313 | None:intergenic | 35.0% |
| ! | ACAAACACTCGTGGATTAAT+TGG | - | chr2.4:9773953-9773972 | MS.gene31429:intron | 35.0% |
| ! | ACAAGTCTTATCTCACTTAG+TGG | + | chr2.4:9774296-9774315 | None:intergenic | 35.0% |
| ! | CAAGTCTTATCTCACTTAGT+GGG | + | chr2.4:9774295-9774314 | None:intergenic | 35.0% |
| ! | CATAGCAACTTGTTCTCAAT+AGG | + | chr2.4:9773674-9773693 | None:intergenic | 35.0% |
| ! | CCCACAATCTTTTCTACTAT+GGG | + | chr2.4:9774063-9774082 | None:intergenic | 35.0% |
| ! | TCCCACAATCTTTTCTACTA+TGG | + | chr2.4:9774064-9774083 | None:intergenic | 35.0% |
| ! | TCTTGTTTAATGTTACGGCT+TGG | - | chr2.4:9775412-9775431 | MS.gene31429:intron | 35.0% |
| !! | ATGGCTTGGTGTTTGTTAAA+CGG | - | chr2.4:9775339-9775358 | MS.gene31429:intron | 35.0% |
| AAAGATCACTTTCCCTGAGA+AGG | - | chr2.4:9775793-9775812 | MS.gene31429:CDS | 40.0% | |
| AACTGATACGGAAAGTCATC+AGG | + | chr2.4:9773485-9773504 | None:intergenic | 40.0% | |
| AAGATCACTTTCCCTGAGAA+GGG | - | chr2.4:9775794-9775813 | MS.gene31429:CDS | 40.0% | |
| AATGGCATGTTTGGATCCTA+TGG | - | chr2.4:9773593-9773612 | MS.gene31429:intron | 40.0% | |
| ACCCCATTGTGCATATTGTT+TGG | - | chr2.4:9775484-9775503 | MS.gene31429:CDS | 40.0% | |
| AGATTGTGGGAAATAGGCTT+AGG | - | chr2.4:9774073-9774092 | MS.gene31429:intron | 40.0% | |
| ATCCACGAGTGTTTGTACTT+CGG | + | chr2.4:9773949-9773968 | None:intergenic | 40.0% | |
| CAATTAGTGTCAAACCTGGA+TGG | - | chr2.4:9775759-9775778 | MS.gene31429:CDS | 40.0% | |
| CCAGCATATTCTCTACAACA+TGG | + | chr2.4:9774375-9774394 | None:intergenic | 40.0% | |
| CCATGTTGTAGAGAATATGC+TGG | - | chr2.4:9774372-9774391 | MS.gene31429:intron | 40.0% | |
| CCCAAACAATATGCACAATG+GGG | + | chr2.4:9775488-9775507 | None:intergenic | 40.0% | |
| CCCCATTGTGCATATTGTTT+GGG | - | chr2.4:9775485-9775504 | MS.gene31429:CDS | 40.0% | |
| CTCAAGTTTCCCTTCTTTGT+CGG | + | chr2.4:9776070-9776089 | None:intergenic | 40.0% | |
| GAAATAGGCTTAGGTGGTTT+AGG | - | chr2.4:9774082-9774101 | MS.gene31429:intron | 40.0% | |
| GAGGATAGTCAAATCACTAG+AGG | - | chr2.4:9774161-9774180 | MS.gene31429:intron | 40.0% | |
| GATGTTCATTTCCCTTCTCA+GGG | + | chr2.4:9775808-9775827 | None:intergenic | 40.0% | |
| GGTGATCTTCATCTTCTTAG+TGG | + | chr2.4:9773723-9773742 | None:intergenic | 40.0% | |
| GTCCGATGATTGAACTGATA+CGG | + | chr2.4:9773497-9773516 | None:intergenic | 40.0% | |
| GTTGTAGAGAATATGCTGGT+AGG | - | chr2.4:9774376-9774395 | MS.gene31429:intron | 40.0% | |
| TAAACAAGAGAAGGACAACG+GGG | + | chr2.4:9775401-9775420 | None:intergenic | 40.0% | |
| TCATCAAAATGTTCATCCGC+AGG | + | chr2.4:9775273-9775292 | None:intergenic | 40.0% | |
| TGTTAAACGGGATCAATAGC+TGG | - | chr2.4:9775439-9775458 | MS.gene31429:intron | 40.0% | |
| TGTTCATCCTGAGTATGAAG+AGG | - | chr2.4:9776009-9776028 | MS.gene31429:CDS | 40.0% | |
| ! | AGCAACTTGTTCTCAATAGG+AGG | + | chr2.4:9773671-9773690 | None:intergenic | 40.0% |
| ! | CTGAGTTTTACACTCAAGTC+AGG | - | chr2.4:9774588-9774607 | MS.gene31429:intron | 40.0% |
| ! | GGGGTTAGTACATTAGACTA+AGG | + | chr2.4:9775382-9775401 | None:intergenic | 40.0% |
| ! | TTCTCTTGCAGAAGCTTTAG+CGG | - | chr2.4:9775925-9775944 | MS.gene31429:intron | 40.0% |
| !! | ACGGCTTGGTGTTTGTTAAA+CGG | - | chr2.4:9775426-9775445 | MS.gene31429:intron | 40.0% |
| !! | CTGATTGGTCTCTTATAGCT+CGG | - | chr2.4:9773984-9774003 | MS.gene31429:intron | 40.0% |
| !! | GTAGGTTTTGTAGTTGTGGT+TGG | - | chr2.4:9774394-9774413 | MS.gene31429:intron | 40.0% |
| !! | TGAAGCATTGACATAGACAC+CGG | + | chr2.4:9774859-9774878 | None:intergenic | 40.0% |
| !! | TGGCTTGGTGTTTGTTAAAC+GGG | - | chr2.4:9775340-9775359 | MS.gene31429:intron | 40.0% |
| !!! | GGTCATGCTGATTTTGTGTT+GGG | - | chr2.4:9773316-9773335 | MS.gene31429:CDS | 40.0% |
| AACCGAAGTACAAACACTCG+TGG | - | chr2.4:9773944-9773963 | MS.gene31429:intron | 45.0% | |
| AAGGACAGTAGATGAGATGG+AGG | - | chr2.4:9774142-9774161 | MS.gene31429:intron | 45.0% | |
| ACAGAAAACTCGCCATGAAG+TGG | - | chr2.4:9773132-9773151 | MS.gene31429:CDS | 45.0% | |
| AGAAGCAGATGCCACACAAA+TGG | + | chr2.4:9774436-9774455 | None:intergenic | 45.0% | |
| AGAGGTAGCAATGGCATGTT+TGG | - | chr2.4:9773584-9773603 | MS.gene31429:intron | 45.0% | |
| AGGAAGGACAGTAGATGAGA+TGG | - | chr2.4:9774139-9774158 | MS.gene31429:intron | 45.0% | |
| AGTCAAATCACTAGAGGCAG+AGG | - | chr2.4:9774167-9774186 | MS.gene31429:intron | 45.0% | |
| AGTGGAGTCAATGTGCATCA+AGG | - | chr2.4:9773629-9773648 | MS.gene31429:intron | 45.0% | |
| CAAGTTGCTATGCTCTCTTG+AGG | - | chr2.4:9773682-9773701 | MS.gene31429:intron | 45.0% | |
| CACAATGTGTTCACTCGTGA+AGG | - | chr2.4:9775875-9775894 | MS.gene31429:intron | 45.0% | |
| CCAAAGGATCCGACAAAGAA+GGG | - | chr2.4:9776058-9776077 | MS.gene31429:CDS | 45.0% | |
| CGAAATCCCTTTGGTGGAAT+GGG | - | chr2.4:9773551-9773570 | MS.gene31429:intron | 45.0% | |
| CGACAAAGAAGGGAAACTTG+AGG | - | chr2.4:9776068-9776087 | MS.gene31429:CDS | 45.0% | |
| CTTATCTCACTTAGTGGGGT+TGG | + | chr2.4:9774290-9774309 | None:intergenic | 45.0% | |
| GAAGAGGTTGTTCCAAGAGA+AGG | - | chr2.4:9776025-9776044 | MS.gene31429:CDS | 45.0% | |
| GGAACAACCTCTTCATACTC+AGG | + | chr2.4:9776019-9776038 | None:intergenic | 45.0% | |
| GGAATGAAGAAAGTCTTGGC+TGG | - | chr2.4:9776142-9776161 | MS.gene31429:CDS | 45.0% | |
| GGATGTTCATTTCCCTTCTC+AGG | + | chr2.4:9775809-9775828 | None:intergenic | 45.0% | |
| GGCAGGAATGAAGAAAGTCT+TGG | - | chr2.4:9776138-9776157 | MS.gene31429:CDS | 45.0% | |
| GTCAAACCTGGATGGAAGAA+GGG | - | chr2.4:9775767-9775786 | MS.gene31429:CDS | 45.0% | |
| GTGAATCTCACCACACTTGA+TGG | - | chr2.4:9775956-9775975 | MS.gene31429:intron | 45.0% | |
| TCAAACCTGGATGGAAGAAG+GGG | - | chr2.4:9775768-9775787 | MS.gene31429:CDS | 45.0% | |
| TCAACGTCAAATTCCCAGCT+CGG | - | chr2.4:9776098-9776117 | MS.gene31429:CDS | 45.0% | |
| TCACGAGTGAACACATTGTG+TGG | + | chr2.4:9775875-9775894 | None:intergenic | 45.0% | |
| TCGAAATCCCTTTGGTGGAA+TGG | - | chr2.4:9773550-9773569 | MS.gene31429:intron | 45.0% | |
| TGACACAGACACTTTGACAC+TGG | + | chr2.4:9774821-9774840 | None:intergenic | 45.0% | |
| TGACTACTACAAGCTTCTGC+AGG | - | chr2.4:9773070-9773089 | MS.gene31429:CDS | 45.0% | |
| TGTCAAACCTGGATGGAAGA+AGG | - | chr2.4:9775766-9775785 | MS.gene31429:CDS | 45.0% | |
| TTGTGGGAAATAGGCTTAGG+TGG | - | chr2.4:9774076-9774095 | MS.gene31429:intron | 45.0% | |
| TTTGGGGATCGAAATCCCTT+TGG | - | chr2.4:9773542-9773561 | MS.gene31429:intron | 45.0% | |
| ! | CAAAGTGTCTGTGTCATGTC+TGG | - | chr2.4:9774825-9774844 | MS.gene31429:intron | 45.0% |
| ! | CTTATCAGGATGCCACTTCA+TGG | + | chr2.4:9773147-9773166 | None:intergenic | 45.0% |
| ! | TCTCTTGCAGAAGCTTTAGC+GGG | - | chr2.4:9775926-9775945 | MS.gene31429:intron | 45.0% |
| ! | TGTGGTTGGTGCAATGTATG+TGG | - | chr2.4:9774408-9774427 | MS.gene31429:intron | 45.0% |
| ! | TTTGGATCCTATGGTGATGC+TGG | - | chr2.4:9773602-9773621 | MS.gene31429:intron | 45.0% |
| !! | ACAAGCTTCTGCAGGTTGAT+CGG | - | chr2.4:9773078-9773097 | MS.gene31429:CDS | 45.0% |
| !! | CGGCTTGGTGTTTGTTAAAC+GGG | - | chr2.4:9775427-9775446 | MS.gene31429:intron | 45.0% |
| !! | CTATATGGCATCGACACATG+TGG | - | chr2.4:9774752-9774771 | MS.gene31429:intron | 45.0% |
| !! | GCTGGTAGGTTTTGTAGTTG+TGG | - | chr2.4:9774390-9774409 | MS.gene31429:intron | 45.0% |
| !! | TGTATGTGGTGCCATTTGTG+TGG | - | chr2.4:9774422-9774441 | MS.gene31429:intron | 45.0% |
| !!! | GGGTCATGCTGATTTTGTGT+TGG | - | chr2.4:9773315-9773334 | MS.gene31429:CDS | 45.0% |
| AATCCCTTTGGTGGAATGGG+AGG | - | chr2.4:9773554-9773573 | MS.gene31429:intron | 50.0% | |
| ACTAGAGGCAGAGGAAGACT+TGG | - | chr2.4:9774176-9774195 | MS.gene31429:intron | 50.0% | |
| ACTTCCTCCAGCATCACCAT+AGG | + | chr2.4:9773612-9773631 | None:intergenic | 50.0% | |
| AGAAGGAATGCCACTGCCAA+AGG | - | chr2.4:9776042-9776061 | MS.gene31429:CDS | 50.0% | |
| AGGGATGTAGAAGTCTCCTG+CGG | - | chr2.4:9775254-9775273 | MS.gene31429:intron | 50.0% | |
| ATCCCTCCCATTCCACCAAA+GGG | + | chr2.4:9773560-9773579 | None:intergenic | 50.0% | |
| ATCCCTTTGGTGGAATGGGA+GGG | - | chr2.4:9773555-9773574 | MS.gene31429:intron | 50.0% | |
| CCCTTCTTTGTCGGATCCTT+TGG | + | chr2.4:9776061-9776080 | None:intergenic | 50.0% | |
| GATTCTCATGCCTCTGGTAG+TGG | - | chr2.4:9773440-9773459 | MS.gene31429:CDS | 50.0% | |
| GCCAAAGGATCCGACAAAGA+AGG | - | chr2.4:9776057-9776076 | MS.gene31429:CDS | 50.0% | |
| GTGACTTTGCTGCACTCGAA+AGG | + | chr2.4:9775719-9775738 | None:intergenic | 50.0% | |
| TCTACTACCACCACTACCAG+AGG | + | chr2.4:9773453-9773472 | None:intergenic | 50.0% | |
| TTTGGTGGAATGGGAGGGAT+GGG | - | chr2.4:9773560-9773579 | MS.gene31429:intron | 50.0% | |
| TTTGTCCCCTTCTTCCATCC+AGG | + | chr2.4:9775776-9775795 | None:intergenic | 50.0% | |
| TTTGTCGGATCCTTTGGCAG+TGG | + | chr2.4:9776055-9776074 | None:intergenic | 50.0% | |
| ! | CTACCAGAGGCATGAGAATC+AGG | + | chr2.4:9773440-9773459 | None:intergenic | 50.0% |
| ! | TATGGTGATGCTGGAGGAAG+TGG | - | chr2.4:9773611-9773630 | MS.gene31429:intron | 50.0% |
| !! | ACTTAGTGGGGTTGGCTACA+TGG | + | chr2.4:9774282-9774301 | None:intergenic | 50.0% |
| !! | ATATGGGGAAGATGGGCTGA+AGG | - | chr2.4:9773397-9773416 | MS.gene31429:CDS | 50.0% |
| !! | TATGGGGAAGATGGGCTGAA+GGG | - | chr2.4:9773398-9773417 | MS.gene31429:CDS | 50.0% |
| ATTCCCAGCTCGGCTCACTT+CGG | - | chr2.4:9776108-9776127 | MS.gene31429:CDS | 55.0% | |
| CATCCCTCCCATTCCACCAA+AGG | + | chr2.4:9773561-9773580 | None:intergenic | 55.0% | |
| CCACCTGATTCTCATGCCTC+TGG | - | chr2.4:9773434-9773453 | MS.gene31429:CDS | 55.0% | |
| CTCACTTCGGATCAGAAGGC+AGG | - | chr2.4:9776121-9776140 | MS.gene31429:CDS | 55.0% | |
| CTTTGGTGGAATGGGAGGGA+TGG | - | chr2.4:9773559-9773578 | MS.gene31429:intron | 55.0% | |
| GAGGCATGAGAATCAGGTGG+TGG | + | chr2.4:9773434-9773453 | None:intergenic | 55.0% | |
| GCAGGAGACTTCTACATCCC+TGG | + | chr2.4:9775255-9775274 | None:intergenic | 55.0% | |
| GCATCAAGGTCCTCCTCGTA+AGG | - | chr2.4:9773643-9773662 | MS.gene31429:intron | 55.0% | |
| GGAAGAGGAAGGTTCGACTG+CGG | + | chr2.4:9774529-9774548 | None:intergenic | 55.0% | |
| GGCAGTGGCATTCCTTCTCT+TGG | + | chr2.4:9776040-9776059 | None:intergenic | 55.0% | |
| GGGATGGGAAGAGGTAGCAA+TGG | - | chr2.4:9773575-9773594 | MS.gene31429:intron | 55.0% | |
| GGGGATCGAAATCCCTTTGG+TGG | - | chr2.4:9773545-9773564 | MS.gene31429:intron | 55.0% | |
| GTGCAGCAAAGTCACATCGC+TGG | - | chr2.4:9775724-9775743 | MS.gene31429:CDS | 55.0% | |
| TCGGCTCACTTCGGATCAGA+AGG | - | chr2.4:9776117-9776136 | MS.gene31429:CDS | 55.0% | |
| ! | CCAGAGGCATGAGAATCAGG+TGG | + | chr2.4:9773437-9773456 | None:intergenic | 55.0% |
| ! | GCATGAGAATCAGGTGGTGG+TGG | + | chr2.4:9773431-9773450 | None:intergenic | 55.0% |
| ! | GGATCCTATGGTGATGCTGG+AGG | - | chr2.4:9773605-9773624 | MS.gene31429:intron | 55.0% |
| !! | GTCATGTCTGGTGTCGTGTC+CGG | - | chr2.4:9774837-9774856 | MS.gene31429:intron | 55.0% |
| !! | TCAATAGGAGGCGCCTTACG+AGG | + | chr2.4:9773659-9773678 | None:intergenic | 55.0% |
| !! | TCTCATGCCTCTGGTAGTGG+TGG | - | chr2.4:9773443-9773462 | MS.gene31429:CDS | 55.0% |
| GATCCGAAGTGAGCCGAGCT+GGG | + | chr2.4:9776114-9776133 | None:intergenic | 60.0% | |
| GGAATGGGAGGGATGGGAAG+AGG | - | chr2.4:9773566-9773585 | MS.gene31429:intron | 60.0% | |
| TGATCCGAAGTGAGCCGAGC+TGG | + | chr2.4:9776115-9776134 | None:intergenic | 60.0% | |
| !! | ATAGGAGGCGCCTTACGAGG+AGG | + | chr2.4:9773656-9773675 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 9773062 | 9776168 | 9773062 | ID=MS.gene31429 |
| chr2.4 | mRNA | 9773062 | 9776168 | 9773062 | ID=MS.gene31429.t1;Parent=MS.gene31429 |
| chr2.4 | exon | 9776004 | 9776168 | 9776004 | ID=MS.gene31429.t1.exon1;Parent=MS.gene31429.t1 |
| chr2.4 | CDS | 9776004 | 9776168 | 9776004 | ID=cds.MS.gene31429.t1;Parent=MS.gene31429.t1 |
| chr2.4 | exon | 9775465 | 9775871 | 9775465 | ID=MS.gene31429.t1.exon2;Parent=MS.gene31429.t1 |
| chr2.4 | CDS | 9775465 | 9775871 | 9775465 | ID=cds.MS.gene31429.t1;Parent=MS.gene31429.t1 |
| chr2.4 | exon | 9773062 | 9773500 | 9773062 | ID=MS.gene31429.t1.exon3;Parent=MS.gene31429.t1 |
| chr2.4 | CDS | 9773062 | 9773500 | 9773062 | ID=cds.MS.gene31429.t1;Parent=MS.gene31429.t1 |
| Gene Sequence |
| Protein sequence |
