AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052037


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052037.t1 MTR_2g098430 98.734 316 4 0 1 316 1 316 0.0 644
MS.gene052037.t1 MTR_2g098430 91.765 85 4 1 317 398 402 486 2.54e-42 155
MS.gene052037.t1 MTR_5g087620 43.598 328 169 3 3 315 7 333 2.47e-87 273
MS.gene052037.t1 MTR_2g098425 69.697 132 36 2 18 145 28 159 4.23e-49 165
MS.gene052037.t1 MTR_8g066610 31.402 328 200 8 7 318 10 328 5.22e-47 167
MS.gene052037.t1 MTR_7g102560 28.571 336 195 7 2 313 5 319 4.06e-42 154
MS.gene052037.t1 MTR_5g045960 31.988 322 189 11 8 312 11 319 5.31e-37 140
MS.gene052037.t1 MTR_5g016660 29.855 345 209 11 8 332 12 343 1.55e-35 136
MS.gene052037.t1 MTR_4g485630 28.707 317 203 11 7 313 10 313 8.29e-35 134
MS.gene052037.t1 MTR_4g485620 29.236 301 191 6 32 318 13 305 8.04e-34 131
MS.gene052037.t1 MTR_7g117405 29.063 320 200 10 8 313 14 320 1.36e-33 131
MS.gene052037.t1 MTR_0536s0020 28.707 317 192 11 6 312 18 310 1.75e-33 130
MS.gene052037.t1 MTR_4g485590 30.218 321 173 10 7 313 10 293 1.85e-33 129
MS.gene052037.t1 MTR_7g102460 30.368 326 201 10 4 313 7 322 4.33e-33 130
MS.gene052037.t1 MTR_5g039900 29.938 324 196 11 7 313 14 323 4.53e-33 129
MS.gene052037.t1 MTR_1g062380 27.744 328 200 10 7 313 17 328 4.82e-33 129
MS.gene052037.t1 MTR_5g045970 29.358 327 195 8 7 313 17 327 5.37e-33 129
MS.gene052037.t1 MTR_2g034990 29.907 321 191 11 7 312 12 313 9.87e-32 125
MS.gene052037.t1 MTR_7g102450 27.414 321 197 8 8 316 13 309 4.33e-31 124
MS.gene052037.t1 MTR_6g035295 28.882 322 203 9 7 313 13 323 4.90e-31 124
MS.gene052037.t1 MTR_5g040030 31.138 334 200 11 2 318 10 330 1.02e-30 123
MS.gene052037.t1 MTR_7g102550 28.704 324 206 8 4 312 7 320 1.32e-30 122
MS.gene052037.t1 MTR_8g466240 29.107 347 194 13 2 328 4 318 2.77e-30 121
MS.gene052037.t1 MTR_4g117890 26.667 315 201 9 6 312 13 305 3.68e-30 121
MS.gene052037.t1 MTR_7g102490 28.834 326 208 10 4 313 7 324 4.52e-30 121
MS.gene052037.t1 MTR_4g024020 28.313 332 202 9 4 313 7 324 1.14e-28 117
MS.gene052037.t1 MTR_7g102520 27.160 324 206 11 8 313 14 325 4.03e-28 115
MS.gene052037.t1 MTR_7g070940 27.726 321 208 9 2 313 5 310 1.88e-27 114
MS.gene052037.t1 MTR_4g117980 27.358 318 199 11 9 312 14 313 1.11e-26 111
MS.gene052037.t1 MTR_8g044140 29.431 299 177 10 34 313 3 286 2.14e-26 110
MS.gene052037.t1 MTR_4g118000 26.837 313 194 11 9 312 15 301 9.88e-26 108
MS.gene052037.t1 MTR_2g035020 27.414 321 199 10 7 312 12 313 1.92e-25 108
MS.gene052037.t1 MTR_7g055710 26.364 330 200 11 7 313 12 321 3.18e-25 107
MS.gene052037.t1 MTR_5g090660 27.844 334 198 16 3 318 2 310 3.72e-25 107
MS.gene052037.t1 MTR_4g031800 28.261 322 195 11 7 313 10 310 3.78e-25 107
MS.gene052037.t1 MTR_4g117950 28.349 321 197 11 1 312 1 297 7.77e-25 106
MS.gene052037.t1 MTR_5g464760 28.529 340 204 13 4 316 10 337 5.37e-24 103
MS.gene052037.t1 MTR_0009s0240 29.193 322 210 11 4 319 5 314 5.47e-24 103
MS.gene052037.t1 MTR_0536s0010 27.187 320 201 9 1 312 16 311 5.74e-24 103
MS.gene052037.t1 MTR_7g070740 27.356 329 204 12 4 313 9 321 9.99e-24 103
MS.gene052037.t1 MTR_8g071070 28.415 366 224 12 4 354 5 347 1.22e-23 102
MS.gene052037.t1 MTR_4g108250 27.439 328 203 11 7 313 12 325 2.52e-23 102
MS.gene052037.t1 MTR_7g070800 26.786 336 214 10 1 320 1 320 2.55e-23 102
MS.gene052037.t1 MTR_5g464810 28.399 331 204 13 7 314 13 333 4.68e-23 100
MS.gene052037.t1 MTR_5g064240 28.399 331 204 13 7 314 13 333 4.68e-23 100
MS.gene052037.t1 MTR_1g040310 27.795 331 201 14 8 319 17 328 8.00e-23 100
MS.gene052037.t1 MTR_4g485640 28.431 306 188 10 16 312 219 502 8.55e-23 100
MS.gene052037.t1 MTR_7g070910 26.074 326 213 10 4 313 9 322 9.69e-23 100
MS.gene052037.t1 MTR_5g067170 25.786 318 202 10 9 312 14 311 1.02e-22 100
MS.gene052037.t1 MTR_5g029800 26.646 319 200 10 7 312 12 309 1.19e-22 99.8
MS.gene052037.t1 MTR_7g071040 24.847 326 217 10 4 313 15 328 1.40e-22 99.8
MS.gene052037.t1 MTR_7g070930 25.000 328 208 11 7 313 15 325 1.89e-22 99.4
MS.gene052037.t1 MTR_0036s0220 27.795 331 206 12 7 314 13 333 1.98e-22 99.4
MS.gene052037.t1 MTR_8g068340 29.179 329 186 11 7 313 13 316 2.01e-22 99.0
MS.gene052037.t1 MTR_2g059240 28.221 326 198 12 8 313 15 324 4.87e-22 97.8
MS.gene052037.t1 MTR_5g090670 28.399 331 198 17 3 315 2 311 7.42e-22 97.4
MS.gene052037.t1 MTR_7g070810 25.758 330 216 10 3 320 6 318 1.09e-21 97.1
MS.gene052037.t1 MTR_0184s0040 29.429 333 204 13 1 322 16 328 1.12e-21 97.1
MS.gene052037.t1 MTR_0078s0190 29.429 333 204 13 1 322 16 328 1.12e-21 97.1
MS.gene052037.t1 MTR_7g070860 26.524 328 209 10 2 313 3 314 1.75e-21 96.3
MS.gene052037.t1 MTR_4g064987 27.532 316 201 9 4 314 6 298 2.45e-21 95.9
MS.gene052037.t1 MTR_4g064987 27.760 317 205 9 4 314 6 304 3.78e-21 95.1
MS.gene052037.t1 MTR_8g068360 26.074 326 199 11 7 313 13 315 6.25e-21 94.7
MS.gene052037.t1 MTR_7g070660 26.875 320 206 12 7 313 12 316 9.36e-21 94.4
MS.gene052037.t1 MTR_7g070870 25.312 320 213 9 3 313 16 318 9.93e-21 94.0
MS.gene052037.t1 MTR_3g009510 23.810 336 215 11 3 318 2 316 1.12e-20 94.0
MS.gene052037.t1 MTR_7g070780 25.617 324 210 10 7 313 12 321 1.37e-20 94.0
MS.gene052037.t1 MTR_8g007565 27.829 327 197 13 7 313 8 315 3.12e-20 92.8
MS.gene052037.t1 MTR_0078s0010 27.463 335 208 11 1 322 1 313 4.48e-20 92.0
MS.gene052037.t1 MTR_5g090580 26.506 332 201 14 3 315 2 309 4.52e-20 92.0
MS.gene052037.t1 MTR_5g070040 26.586 331 207 13 1 315 6 316 4.69e-20 92.0
MS.gene052037.t1 MTR_7g012120 26.415 318 203 10 7 312 17 315 4.90e-20 92.0
MS.gene052037.t1 MTR_3g069710 26.126 333 193 14 1 314 7 305 5.91e-20 91.7
MS.gene052037.t1 MTR_5g090600 25.688 327 208 12 3 316 2 306 6.05e-20 91.7
MS.gene052037.t1 MTR_1g090270 26.543 324 193 10 7 315 16 309 1.19e-19 90.9
MS.gene052037.t1 MTR_7g070610 25.231 325 210 11 7 313 14 323 1.30e-19 90.9
MS.gene052037.t1 MTR_5g090700 25.982 331 206 14 3 315 2 311 1.74e-19 90.5
MS.gene052037.t1 MTR_8g007650 27.523 327 198 13 7 313 8 315 2.40e-19 90.1
MS.gene052037.t1 MTR_8g006730 24.709 344 200 12 1 319 1 310 4.82e-19 89.0
MS.gene052037.t1 MTR_4g117960 26.183 317 202 11 9 312 14 311 6.23e-19 89.0
MS.gene052037.t1 MTR_8g068330 26.791 321 204 11 7 313 9 312 1.51e-18 87.4
MS.gene052037.t1 MTR_5g090620 25.526 333 203 14 3 315 2 309 1.91e-18 87.4
MS.gene052037.t1 MTR_8g465670 26.586 331 195 14 3 315 4 304 2.10e-18 87.0
MS.gene052037.t1 MTR_6g488280 25.075 335 200 14 1 315 1 304 2.25e-18 87.0
MS.gene052037.t1 MTR_0428s0010 25.075 335 200 14 1 315 1 304 2.25e-18 87.0
MS.gene052037.t1 MTR_7g117170 27.711 332 194 14 7 320 16 319 2.50e-18 87.0
MS.gene052037.t1 MTR_6g023665 24.699 332 205 11 1 315 8 311 3.15e-18 86.7
MS.gene052037.t1 MTR_6g035265 24.601 313 205 10 9 312 14 304 3.22e-18 86.7
MS.gene052037.t1 MTR_8g032950 23.734 316 214 8 7 312 13 311 3.37e-18 86.7
MS.gene052037.t1 MTR_7g047030 27.246 334 208 12 1 321 1 312 4.53e-18 86.3
MS.gene052037.t1 MTR_7g047270 27.246 334 208 12 1 321 1 312 4.53e-18 86.3
MS.gene052037.t1 MTR_2g035040 29.612 206 122 5 119 312 24 218 4.94e-18 85.5
MS.gene052037.t1 MTR_4g094220 25.581 344 220 11 4 320 5 339 6.96e-18 85.5
MS.gene052037.t1 MTR_5g066410 27.414 321 191 12 9 315 1 293 1.30e-17 84.7
MS.gene052037.t1 MTR_8g006220 25.455 330 204 12 1 315 1 303 1.30e-17 84.7
MS.gene052037.t1 MTR_6g033625 25.893 336 197 17 4 313 2 311 1.32e-17 84.7
MS.gene052037.t1 MTR_8g006270 29.104 268 156 11 57 315 60 302 1.34e-17 84.7
MS.gene052037.t1 MTR_7g080950 25.797 345 190 12 1 317 1 307 2.46e-17 84.0
MS.gene052037.t1 MTR_6g033725 25.291 344 194 12 4 317 2 312 2.69e-17 84.0
MS.gene052037.t1 MTR_6g014187 23.824 340 224 9 3 316 7 337 2.78e-17 84.0
MS.gene052037.t1 MTR_3g079480 24.058 345 216 10 2 316 17 345 3.44e-17 83.6
MS.gene052037.t1 MTR_5g035560 24.451 319 205 10 7 313 12 306 4.45e-17 83.2
MS.gene052037.t1 MTR_1g032490 25.688 327 219 11 7 321 11 325 4.64e-17 83.2
MS.gene052037.t1 MTR_2g008220 24.771 327 202 11 7 313 15 317 7.45e-17 82.4
MS.gene052037.t1 MTR_6g042310 25.000 344 228 12 7 341 19 341 7.58e-17 82.4
MS.gene052037.t1 MTR_8g006710 25.959 339 193 13 1 315 1 305 7.84e-17 82.4
MS.gene052037.t1 MTR_2g008210 26.239 343 207 12 2 316 7 331 1.13e-16 82.0
MS.gene052037.t1 MTR_0078s0060 27.003 337 206 12 1 322 1 312 1.83e-16 81.3
MS.gene052037.t1 MTR_6g038240 25.705 319 203 12 8 313 13 310 2.13e-16 80.9
MS.gene052037.t1 MTR_6g035185 26.791 321 197 12 9 312 14 313 2.86e-16 80.9
MS.gene052037.t1 MTR_8g006230 27.632 228 145 10 97 315 31 247 2.96e-16 79.0
MS.gene052037.t1 MTR_5g090610 25.466 322 203 14 3 315 2 295 3.38e-16 80.5
MS.gene052037.t1 MTR_2g046750 24.841 314 206 12 14 315 13 308 4.03e-16 80.1
MS.gene052037.t1 MTR_7g011470 25.526 333 209 11 3 314 7 321 4.75e-16 80.1
MS.gene052037.t1 MTR_6g038300 25.836 329 192 13 7 313 12 310 7.67e-16 79.3
MS.gene052037.t1 MTR_8g056740 26.852 216 111 4 108 318 46 219 8.32e-16 79.0
MS.gene052037.t1 MTR_6g013960 24.269 342 214 12 3 313 7 334 9.33e-16 79.3
MS.gene052037.t1 MTR_7g013240 24.444 315 205 11 8 314 8 297 9.58e-16 79.0
MS.gene052037.t1 MTR_4g079250 27.385 325 194 15 7 315 9 307 9.58e-16 79.0
MS.gene052037.t1 MTR_8g027870 25.538 325 202 12 7 319 19 315 9.90e-16 79.0
MS.gene052037.t1 MTR_3g479490 24.432 352 217 12 1 319 1 336 1.09e-15 79.0
MS.gene052037.t1 MTR_7g011470 25.602 332 206 11 3 314 7 317 1.24e-15 78.6
MS.gene052037.t1 MTR_4g095008 27.190 331 189 16 6 314 11 311 1.41e-15 79.0
MS.gene052037.t1 MTR_4g079270 26.687 326 197 13 7 316 9 308 1.67e-15 78.2
MS.gene052037.t1 MTR_8g027885 26.769 325 198 15 7 319 19 315 1.74e-15 78.2
MS.gene052037.t1 MTR_8g074550 25.776 322 202 11 7 313 9 308 1.77e-15 78.6
MS.gene052037.t1 MTR_6g013440 23.699 346 213 12 3 314 8 336 1.97e-15 78.2
MS.gene052037.t1 MTR_5g035580 24.062 320 205 12 7 313 14 308 2.04e-15 78.2
MS.gene052037.t1 MTR_5g090630 25.153 326 204 12 3 315 2 300 2.63e-15 77.8
MS.gene052037.t1 MTR_8g009063 25.610 328 204 14 1 313 8 310 4.52e-15 77.0
MS.gene052037.t1 MTR_0288s0020 23.009 339 209 12 3 316 7 318 4.73e-15 77.0
MS.gene052037.t1 MTR_3g069690 27.640 322 191 15 7 314 9 302 5.34e-15 76.6
MS.gene052037.t1 MTR_5g070090 25.625 320 202 13 7 310 12 311 7.24e-15 76.3
MS.gene052037.t1 MTR_7g067120 26.101 318 192 15 3 313 6 287 7.43e-15 76.3
MS.gene052037.t1 MTR_3g479470 25.843 356 231 12 2 334 9 354 7.98e-15 76.3
MS.gene052037.t1 MTR_7g046490 25.836 329 203 9 1 315 1 302 8.39e-15 76.3
MS.gene052037.t1 MTR_8g009055 24.699 332 206 15 1 315 1 305 8.87e-15 76.3
MS.gene052037.t1 MTR_6g014040 23.547 344 223 11 2 316 6 338 9.74e-15 76.3
MS.gene052037.t1 MTR_2g040530 24.889 225 150 8 99 315 94 307 1.01e-14 75.9
MS.gene052037.t1 MTR_5g019580 25.360 347 198 15 1 318 2 316 1.54e-14 75.5
MS.gene052037.t1 MTR_8g009067 25.610 328 208 12 1 315 1 305 1.55e-14 75.5
MS.gene052037.t1 MTR_3g008010 24.419 344 209 14 4 314 8 333 1.77e-14 75.1
MS.gene052037.t1 MTR_5g031860 24.793 363 207 16 7 332 13 346 1.81e-14 75.1
MS.gene052037.t1 MTR_2g008226 24.776 335 201 14 7 313 11 322 1.88e-14 75.1
MS.gene052037.t1 MTR_3g031400 22.468 316 207 9 7 313 19 305 2.48e-14 74.7
MS.gene052037.t1 MTR_1g107315 25.982 331 213 11 7 321 9 323 2.63e-14 74.7
MS.gene052037.t1 MTR_6g014290 23.768 345 212 14 3 314 7 333 2.73e-14 74.7
MS.gene052037.t1 MTR_6g033675 25.656 343 189 16 4 313 2 311 3.70e-14 74.3
MS.gene052037.t1 MTR_5g072860 23.939 330 201 12 7 313 19 321 4.13e-14 73.9
MS.gene052037.t1 MTR_5g031830 26.027 365 211 16 3 332 7 347 4.13e-14 73.9
MS.gene052037.t1 MTR_8g006260 27.273 209 130 6 118 315 113 310 5.76e-14 73.6
MS.gene052037.t1 MTR_7g013260 24.606 317 203 13 8 314 8 298 8.34e-14 73.2
MS.gene052037.t1 MTR_6g014020 23.343 347 213 12 3 314 7 335 8.91e-14 73.2
MS.gene052037.t1 MTR_6g014200 25.074 339 215 15 4 314 5 332 9.64e-14 73.2
MS.gene052037.t1 MTR_8g008990 24.316 329 211 14 1 315 1 305 9.65e-14 72.8
MS.gene052037.t1 MTR_0536s0030 27.179 195 121 6 36 229 8 182 1.07e-13 72.4
MS.gene052037.t1 MTR_0078s0200 29.528 254 155 12 73 315 67 307 1.10e-13 71.6
MS.gene052037.t1 MTR_0184s0030 28.438 320 186 16 12 315 15 307 1.18e-13 72.8
MS.gene052037.t1 MTR_8g009073 25.387 323 215 9 1 315 1 305 1.23e-13 72.8
MS.gene052037.t1 MTR_8g077590 24.803 254 165 8 73 315 70 308 1.27e-13 72.4
MS.gene052037.t1 MTR_5g031840 24.011 354 228 12 3 332 2 338 1.85e-13 72.0
MS.gene052037.t1 MTR_4g082810 25.263 380 218 16 3 355 4 344 1.99e-13 71.6
MS.gene052037.t1 MTR_2g046820 24.437 311 204 13 16 315 15 305 2.13e-13 72.0
MS.gene052037.t1 MTR_1g107350 23.263 331 222 13 7 321 9 323 2.48e-13 71.6
MS.gene052037.t1 MTR_7g080900 27.077 325 190 15 8 313 14 310 2.58e-13 71.6
MS.gene052037.t1 MTR_8g012745 25.442 283 181 10 48 321 53 314 2.70e-13 71.6
MS.gene052037.t1 MTR_5g098930 23.423 333 203 14 3 315 2 302 2.76e-13 71.6
MS.gene052037.t1 MTR_6g013990 24.419 344 215 11 3 316 7 335 2.98e-13 71.6
MS.gene052037.t1 MTR_7g013180 25.460 326 195 14 8 313 7 304 3.21e-13 71.2
MS.gene052037.t1 MTR_6g011340 24.432 352 203 13 3 314 7 335 3.85e-13 71.2
MS.gene052037.t1 MTR_1g107380 26.606 327 203 13 7 313 14 323 4.08e-13 71.2
MS.gene052037.t1 MTR_6g005600 25.287 348 222 14 1 337 1 321 8.64e-13 70.1
MS.gene052037.t1 MTR_7g013200 25.000 320 198 10 8 314 7 297 9.97e-13 69.7
MS.gene052037.t1 MTR_7g080940 24.699 332 210 12 1 317 6 312 1.71e-12 68.9
MS.gene052037.t1 MTR_7g013220 25.076 327 200 11 8 314 7 308 1.96e-12 68.9
MS.gene052037.t1 MTR_6g038200 25.234 321 202 12 8 313 13 310 2.24e-12 68.6
MS.gene052037.t1 MTR_5g019580 38.532 109 59 3 216 318 234 340 2.55e-12 68.6
MS.gene052037.t1 MTR_8g012635 24.444 270 188 8 54 315 47 308 2.79e-12 68.6
MS.gene052037.t1 MTR_6g014220 23.810 336 223 8 3 314 7 333 3.14e-12 68.2
MS.gene052037.t1 MTR_1g029540 24.490 343 224 14 11 346 19 333 3.15e-12 68.2
MS.gene052037.t1 MTR_8g064880 22.884 319 224 9 7 313 10 318 3.26e-12 68.2
MS.gene052037.t1 MTR_6g014170 24.169 331 212 11 3 314 7 317 6.00e-12 67.4
MS.gene052037.t1 MTR_2g046620 23.692 325 203 14 7 313 17 314 9.17e-12 67.0
MS.gene052037.t1 MTR_8g012650 26.267 217 142 6 120 327 113 320 1.37e-11 66.2
MS.gene052037.t1 MTR_6g013920 24.069 349 205 13 4 314 8 334 1.41e-11 66.2
MS.gene052037.t1 MTR_5g072820 23.494 332 212 12 7 329 11 309 1.47e-11 66.2
MS.gene052037.t1 MTR_6g038220 26.728 217 137 6 110 313 102 309 1.48e-11 66.2
MS.gene052037.t1 MTR_6g033615 25.373 335 194 13 4 317 2 301 1.80e-11 65.9
MS.gene052037.t1 MTR_3g479620 31.847 157 97 5 1 154 1 150 1.86e-11 62.8
MS.gene052037.t1 MTR_3g031450 19.688 320 213 9 7 313 19 307 2.45e-11 65.5
MS.gene052037.t1 MTR_1g107285 22.936 327 218 9 7 315 9 319 4.25e-11 64.7
MS.gene052037.t1 MTR_8g009073 36.275 102 61 2 216 315 77 176 5.36e-11 63.9
MS.gene052037.t1 MTR_8g009067 27.835 194 116 7 133 315 7 187 7.43e-11 63.5
MS.gene052037.t1 MTR_6g014310 21.965 346 221 11 4 316 9 338 7.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052037.t1 AT5G12890 48.632 329 150 5 1 316 1 323 4.20e-110 332
MS.gene052037.t1 AT5G12890 53.247 77 30 2 317 391 409 481 1.98e-14 75.1
MS.gene052037.t1 AT2G36770 30.938 320 197 9 8 313 16 325 1.45e-42 155
MS.gene052037.t1 AT2G36780 30.094 319 201 7 8 313 16 325 4.46e-42 154
MS.gene052037.t1 AT2G36750 30.247 324 193 8 8 313 12 320 7.82e-41 151
MS.gene052037.t1 AT2G36800 31.153 321 196 10 8 313 14 324 2.62e-38 144
MS.gene052037.t1 AT2G36760 29.909 331 186 11 8 313 16 325 4.44e-37 140
MS.gene052037.t1 AT2G15480 28.144 334 206 10 1 313 5 325 5.03e-37 140
MS.gene052037.t1 AT2G15480 28.144 334 206 10 1 313 5 325 7.06e-37 140
MS.gene052037.t1 AT1G73880 29.321 324 207 8 4 318 12 322 2.09e-36 139
MS.gene052037.t1 AT2G15490 27.353 340 213 9 3 321 4 330 3.09e-36 138
MS.gene052037.t1 AT2G15490 27.795 331 205 9 3 312 4 321 3.31e-36 138
MS.gene052037.t1 AT3G53150 28.049 328 210 7 2 313 18 335 1.18e-35 137
MS.gene052037.t1 AT4G34131 29.254 335 201 10 4 316 8 328 4.57e-35 135
MS.gene052037.t1 AT2G36790 31.269 323 192 7 8 313 15 324 9.03e-35 134
MS.gene052037.t1 AT3G53160 27.778 324 202 9 8 313 10 319 5.15e-34 132
MS.gene052037.t1 AT1G51210 32.278 316 190 13 4 313 18 315 4.31e-33 129
MS.gene052037.t1 AT4G34135 27.795 331 205 9 4 313 9 326 5.97e-33 126
MS.gene052037.t1 AT4G34135 27.795 331 205 9 4 313 9 326 2.93e-32 127
MS.gene052037.t1 AT2G16890 28.354 328 210 11 5 319 8 323 3.75e-31 124
MS.gene052037.t1 AT4G34138 29.091 330 199 10 4 312 9 324 5.02e-31 124
MS.gene052037.t1 AT2G16890 28.354 328 210 11 5 319 8 323 6.73e-31 122
MS.gene052037.t1 AT5G03490 30.351 313 199 11 7 313 20 319 2.36e-30 122
MS.gene052037.t1 AT1G10400 27.147 361 236 12 3 349 4 351 5.18e-29 118
MS.gene052037.t1 AT5G14860 26.567 335 209 11 8 319 10 330 2.26e-27 113
MS.gene052037.t1 AT5G59580 26.752 314 208 9 4 314 7 301 5.55e-27 112
MS.gene052037.t1 AT1G22360 28.198 344 201 12 1 314 5 332 2.81e-26 110
MS.gene052037.t1 AT1G22360 28.198 344 201 12 1 314 5 332 3.34e-26 110
MS.gene052037.t1 AT3G46670 27.245 323 205 11 1 314 1 302 3.25e-25 107
MS.gene052037.t1 AT3G46660 27.673 318 203 11 4 314 12 309 4.87e-25 106
MS.gene052037.t1 AT2G16890 26.582 316 207 10 2 304 5 308 5.40e-25 104
MS.gene052037.t1 AT2G16890 26.582 316 207 10 2 304 5 308 5.40e-25 104
MS.gene052037.t1 AT5G59590 27.019 322 208 10 1 314 1 303 6.82e-25 106
MS.gene052037.t1 AT5G38040 24.918 305 207 7 14 314 18 304 5.45e-24 103
MS.gene052037.t1 AT1G22370 29.912 341 192 15 2 314 9 330 1.32e-23 102
MS.gene052037.t1 AT1G22400 26.549 339 216 12 2 316 9 338 6.11e-23 100
MS.gene052037.t1 AT1G22340 28.242 347 195 12 2 314 9 335 3.88e-22 98.6
MS.gene052037.t1 AT3G46700 25.625 320 205 9 2 314 5 298 5.49e-22 97.8
MS.gene052037.t1 AT5G49690 27.077 325 203 13 3 313 7 311 1.47e-21 96.7
MS.gene052037.t1 AT1G22380 26.048 334 217 10 3 314 10 335 1.63e-21 96.7
MS.gene052037.t1 AT3G46650 23.567 314 206 8 1 313 5 285 2.64e-20 92.8
MS.gene052037.t1 AT3G46720 25.872 344 220 11 2 335 5 323 3.46e-20 92.4
MS.gene052037.t1 AT2G36970 24.771 327 227 9 2 316 6 325 1.36e-19 90.9
MS.gene052037.t1 AT2G29740 25.449 334 215 11 1 313 1 321 3.53e-19 89.7
MS.gene052037.t1 AT2G22590 26.380 326 204 14 4 313 13 318 1.08e-18 88.2
MS.gene052037.t1 AT5G05880 26.667 315 201 10 7 313 9 301 3.56e-18 86.3
MS.gene052037.t1 AT3G11340 24.528 318 207 10 4 314 7 298 1.25e-17 84.7
MS.gene052037.t1 AT2G15490 27.429 175 106 5 3 164 4 170 4.20e-17 81.3
MS.gene052037.t1 AT5G37950 23.860 285 193 7 33 314 11 274 4.85e-17 82.0
MS.gene052037.t1 AT5G54060 26.364 330 196 14 6 315 13 315 9.42e-17 82.0
MS.gene052037.t1 AT5G05900 25.466 322 202 12 7 313 9 307 1.13e-16 82.0
MS.gene052037.t1 AT1G07240 25.846 325 211 12 7 313 6 318 1.18e-16 82.0
MS.gene052037.t1 AT5G05860 24.611 321 215 8 1 314 1 301 1.57e-16 81.6
MS.gene052037.t1 AT2G31750 27.027 333 189 15 4 313 6 307 1.58e-16 81.6
MS.gene052037.t1 AT2G31750 27.327 333 188 16 4 313 6 307 2.43e-16 80.9
MS.gene052037.t1 AT3G55700 23.344 317 217 12 5 314 7 304 4.69e-16 80.1
MS.gene052037.t1 AT1G05675 24.507 355 224 11 1 341 1 325 5.49e-16 79.7
MS.gene052037.t1 AT1G01390 27.353 340 193 16 1 317 18 326 6.48e-16 79.7
MS.gene052037.t1 AT1G01390 27.353 340 193 16 1 317 1 309 7.30e-16 79.7
MS.gene052037.t1 AT3G02100 23.867 331 209 14 4 311 11 321 8.05e-16 79.3
MS.gene052037.t1 AT3G21750 25.526 333 192 14 4 313 2 301 1.21e-15 79.0
MS.gene052037.t1 AT2G28080 25.610 328 200 12 11 316 23 328 1.77e-15 78.6
MS.gene052037.t1 AT1G05680 24.159 327 214 10 1 313 1 307 2.05e-15 78.2
MS.gene052037.t1 AT2G29730 23.620 326 213 10 6 313 5 312 2.84e-15 77.8
MS.gene052037.t1 AT2G30140 22.684 313 220 9 5 313 12 306 5.26e-15 77.0
MS.gene052037.t1 AT1G07250 24.107 336 215 15 1 313 1 319 8.85e-15 76.3
MS.gene052037.t1 AT2G30140 22.436 312 221 8 5 313 12 305 9.54e-15 75.9
MS.gene052037.t1 AT5G26310 22.892 332 206 11 4 317 5 304 1.37e-14 75.5
MS.gene052037.t1 AT2G23260 25.392 319 203 12 7 314 13 307 1.70e-14 75.1
MS.gene052037.t1 AT5G05870 24.062 320 217 10 4 314 6 308 3.07e-14 74.7
MS.gene052037.t1 AT3G16520 24.629 337 203 14 4 317 3 311 3.15e-14 74.3
MS.gene052037.t1 AT2G29750 23.952 334 214 12 3 313 5 321 3.26e-14 74.3
MS.gene052037.t1 AT5G66690 23.009 339 205 12 4 322 5 307 3.51e-14 74.3
MS.gene052037.t1 AT2G31790 22.769 325 219 9 2 313 4 309 3.54e-14 74.3
MS.gene052037.t1 AT3G16520 24.629 337 203 14 4 317 3 311 3.89e-14 74.3
MS.gene052037.t1 AT3G16520 24.629 337 203 14 4 317 3 311 5.34e-14 73.9
MS.gene052037.t1 AT1G01420 26.074 326 197 15 7 315 9 307 7.74e-14 73.2
MS.gene052037.t1 AT3G21790 24.113 282 185 9 58 313 34 312 8.66e-14 73.2
MS.gene052037.t1 AT1G01420 26.074 326 197 15 7 315 12 310 9.00e-14 73.2
MS.gene052037.t1 AT2G29710 25.526 333 195 12 7 313 6 311 1.14e-13 72.8
MS.gene052037.t1 AT3G21780 25.538 325 204 13 4 313 2 303 3.82e-13 71.2
MS.gene052037.t1 AT5G05890 24.716 352 215 12 7 342 9 326 4.89e-13 70.9
MS.gene052037.t1 AT4G36770 22.257 319 205 11 16 318 14 305 4.96e-13 70.9
MS.gene052037.t1 AT4G15480 23.193 332 219 13 7 321 20 332 7.00e-13 70.5
MS.gene052037.t1 AT2G43840 23.944 355 206 12 7 335 8 324 7.75e-13 70.1
MS.gene052037.t1 AT1G07260 22.892 332 223 12 1 313 1 318 8.28e-13 70.1
MS.gene052037.t1 AT2G43840 23.944 355 206 12 7 335 8 324 1.06e-12 69.7
MS.gene052037.t1 AT2G18570 33.929 112 63 2 215 320 205 311 1.13e-12 69.7
MS.gene052037.t1 AT4G15280 23.853 327 212 13 4 313 2 308 1.41e-12 69.3
MS.gene052037.t1 AT4G15280 23.853 327 212 13 4 313 34 340 1.57e-12 69.3
MS.gene052037.t1 AT2G43820 24.501 351 217 14 3 335 4 324 2.04e-12 68.9
MS.gene052037.t1 AT3G21760 23.714 350 191 14 4 313 2 315 6.10e-12 67.4
MS.gene052037.t1 AT4G01070 23.765 324 207 14 7 315 9 307 1.29e-11 66.6
MS.gene052037.t1 AT4G01070 23.457 324 208 14 7 315 9 307 2.43e-11 65.1
MS.gene052037.t1 AT2G18560 34.821 112 62 2 215 320 115 221 2.63e-11 65.1
MS.gene052037.t1 AT3G50740 35.185 108 59 2 216 317 207 309 3.33e-11 65.1
MS.gene052037.t1 AT3G55710 22.360 322 218 12 5 314 7 308 6.69e-11 64.3

Find 83 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAAATAATACATAGTTTA+TGG 0.134234 2.2:+4215571 None:intergenic
CTTTGAATCAAACGAGCTTC+TGG 0.209330 2.2:+4215387 None:intergenic
AGAGAATGCTTGTAAGATTA+AGG 0.211823 2.2:-4214599 MS.gene052037:CDS
GGAAATGAAGATGGAATTAA+AGG 0.240250 2.2:-4214550 MS.gene052037:CDS
GCCATTCTTTACAAACTTTA+GGG 0.243533 2.2:+4215130 None:intergenic
TTTAGTGGTGCTAGTGGTTA+TGG 0.281612 2.2:-4215489 MS.gene052037:CDS
AGCCATTCTTTACAAACTTT+AGG 0.290223 2.2:+4215129 None:intergenic
TAGCTTGTTATTATTCTCTA+TGG 0.292692 2.2:-4215464 MS.gene052037:CDS
CTGTGTTAGGTGGGAGATTA+TGG 0.295244 2.2:+4215706 None:intergenic
GAATTAAAGGGTCGTCTGTT+AGG 0.309853 2.2:-4214537 MS.gene052037:CDS
TCGGTATTATTCGTTTGTTT+TGG 0.311350 2.2:-4215087 MS.gene052037:CDS
AGGAGATTGATGGAGGAATT+TGG 0.321535 2.2:+4215753 None:intergenic
ACCCTAAAGTTTGTAAAGAA+TGG 0.340094 2.2:-4215131 MS.gene052037:CDS
CACCAGGAAATTCAATATTC+CGG 0.356834 2.2:-4215214 MS.gene052037:CDS
GAGAAAATTGAGTTGGTAAT+GGG 0.358299 2.2:-4214643 MS.gene052037:CDS
AATAATCCTATTCCCATTCA+TGG 0.366106 2.2:-4215898 MS.gene052037:CDS
GTTGTTGAGTTAAGATGTTT+TGG 0.372770 2.2:+4215598 None:intergenic
GGAAGAATAATCTCTGTGAT+TGG 0.382296 2.2:-4215302 MS.gene052037:CDS
AACCGGAATATTGAATTTCC+TGG 0.387271 2.2:+4215212 None:intergenic
GTTGTGTGGTGTGTTGATTA+TGG 0.387564 2.2:+4215803 None:intergenic
TCAGCTTGTGAGATATTGTT+TGG 0.392679 2.2:+4215354 None:intergenic
AATATTCCGGTTTGGTCGAT+TGG 0.394231 2.2:-4215201 MS.gene052037:CDS
ACCTACTTTACCTCGTGAAC+CGG 0.406311 2.2:+4215161 None:intergenic
TGATACAAAGCCTTTGAATT+CGG 0.406654 2.2:-4215106 MS.gene052037:CDS
GGACCGGTTGTTCTTTCAAC+CGG 0.411384 2.2:-4215180 MS.gene052037:CDS
ATAATACATAGTTTATGGTT+AGG 0.413489 2.2:+4215576 None:intergenic
GGAAATTCAATATTCCGGTT+TGG 0.420390 2.2:-4215209 MS.gene052037:CDS
AATTAAAGGGTCGTCTGTTA+GGG 0.430108 2.2:-4214536 MS.gene052037:CDS
AAAGTGGAAAGAATTTCATC+TGG 0.435594 2.2:-4215008 MS.gene052037:CDS
GATGAGTTCTTATCAGCTGC+TGG 0.451436 2.2:-4214508 MS.gene052037:CDS
TTTAAGGCTAAAGCTAAGAA+TGG 0.451476 2.2:+4215858 None:intergenic
GTAAGATTAAGGATATGATA+AGG 0.455582 2.2:-4214588 MS.gene052037:CDS
AAGCTGATGGATTTGATGAT+TGG 0.456760 2.2:-4215338 MS.gene052037:CDS
TGAGAAAATTGAGTTGGTAA+TGG 0.459637 2.2:-4214644 MS.gene052037:CDS
AGTTTGATGACAAGATTGTA+AGG 0.463090 2.2:+4215666 None:intergenic
GAAGAATAATCTCTGTGATT+GGG 0.464317 2.2:-4215301 MS.gene052037:CDS
TTAAGGCTAAAGCTAAGAAT+GGG 0.481159 2.2:+4215859 None:intergenic
TAAGATTAAGGATATGATAA+GGG 0.483195 2.2:-4214587 MS.gene052037:CDS
TCAACTGTTGCTAAAGAACT+TGG 0.490713 2.2:-4215528 MS.gene052037:CDS
GGAGGAATTTGGTGGGAGAG+AGG 0.492852 2.2:+4215764 None:intergenic
ATGTGACCCTGTGCCATGAA+TGG 0.493245 2.2:+4215885 None:intergenic
CCTATTCCCATTCATGGCAC+AGG 0.495529 2.2:-4215892 MS.gene052037:CDS
AGGGATTGTGAGGAGATTGA+TGG 0.495583 2.2:+4215743 None:intergenic
TATGGTCGGAAGAGATGAAA+GGG 0.496705 2.2:+4215724 None:intergenic
TGGGTAGTGAGGCCACCAAT+AGG 0.499122 2.2:-4214988 MS.gene052037:intron
CCTGTGCCATGAATGGGAAT+AGG 0.499236 2.2:+4215892 None:intergenic
TCCGGTTTGGTCGATTGGAC+CGG 0.504013 2.2:-4215196 MS.gene052037:CDS
GAACCGGTTGAAAGAACAAC+CGG 0.514397 2.2:+4215177 None:intergenic
GTGAAAGATGGAAATGAAGA+TGG 0.515218 2.2:-4214559 MS.gene052037:CDS
AACAATATCTCACAAGCTGA+TGG 0.518344 2.2:-4215351 MS.gene052037:CDS
TATTGTTGAGAAAATTGAGT+TGG 0.519125 2.2:-4214650 MS.gene052037:CDS
GCTACACAAATGATGCAACT+TGG 0.519988 2.2:-4215045 MS.gene052037:CDS
ACCGGTCCAATCGACCAAAC+CGG 0.520438 2.2:+4215195 None:intergenic
ATAAGGGATGCTGTGAAAGA+TGG 0.525494 2.2:-4214571 MS.gene052037:CDS
AGAGATTGGTGTTTGTGTTG+AGG 0.530980 2.2:-4214710 MS.gene052037:CDS
TTATGGTCGGAAGAGATGAA+AGG 0.544282 2.2:+4215723 None:intergenic
TCAGAGTCTGTGAATCTATG+AGG 0.545471 2.2:+4215432 None:intergenic
GAAAATTGAGTTGGTAATGG+GGG 0.546210 2.2:-4214641 MS.gene052037:CDS
GAAATGAAGATGGAATTAAA+GGG 0.548447 2.2:-4214549 MS.gene052037:CDS
TGTGACCCTGTGCCATGAAT+GGG 0.550127 2.2:+4215886 None:intergenic
GATTGATGGAGGAATTTGGT+GGG 0.552915 2.2:+4215757 None:intergenic
TTTATATCAAAACCTATTGG+TGG 0.556086 2.2:+4214976 None:intergenic
TGTGATTGGGTCAACTCAGA+TGG 0.556349 2.2:-4215288 MS.gene052037:CDS
AGAAAATTGAGTTGGTAATG+GGG 0.565415 2.2:-4214642 MS.gene052037:CDS
ACGAATAATACCGAATTCAA+AGG 0.567024 2.2:+4215096 None:intergenic
GATGCAACTTGGAATCGCGT+TGG 0.574777 2.2:-4215034 MS.gene052037:CDS
AAGAGATGAAAGGGATTGTG+AGG 0.582242 2.2:+4215733 None:intergenic
GTTTGTGTTGAGGTTGCTAG+AGG 0.587344 2.2:-4214700 MS.gene052037:CDS
AGATTGATGGAGGAATTTGG+TGG 0.590635 2.2:+4215756 None:intergenic
AAGCTGTTGGAAGAAGAGAT+TGG 0.593734 2.2:-4214724 MS.gene052037:intron
TTGGGCTCAACTACTTCACC+AGG 0.599872 2.2:-4215230 MS.gene052037:CDS
AGAATTTCATCTGGGTAGTG+AGG 0.609910 2.2:-4214999 MS.gene052037:CDS
ACCGGTTCACGAGGTAAAGT+AGG 0.615270 2.2:-4215162 MS.gene052037:CDS
CTATTCCCATTCATGGCACA+GGG 0.615346 2.2:-4215891 MS.gene052037:CDS
AAGTGGAAAGAATTTCATCT+GGG 0.619511 2.2:-4215007 MS.gene052037:CDS
GTTCTTTCAACCGGTTCACG+AGG 0.621115 2.2:-4215171 MS.gene052037:CDS
GATTGTGAGGAGATTGATGG+AGG 0.623246 2.2:+4215746 None:intergenic
TGCTAGAGGGAAGAGTTGTG+AGG 0.626646 2.2:-4214686 MS.gene052037:CDS
TTTGTGTTGAGGTTGCTAGA+GGG 0.628172 2.2:-4214699 MS.gene052037:CDS
GTTTGATGACAAGATTGTAA+GGG 0.635840 2.2:+4215667 None:intergenic
GGTTCACGAGGTAAAGTAGG+TGG 0.656332 2.2:-4215159 MS.gene052037:CDS
GTTAGGTGGGAGATTATGGT+CGG 0.657740 2.2:+4215710 None:intergenic
ATTAAAGGGTCGTCTGTTAG+GGG 0.737702 2.2:-4214535 MS.gene052037:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTCTGATATTTTCTT+TGG - chr2.2:4214840-4214859 MS.gene052037:intron 15.0%
!! AGGTATAATAGTAAATGATT+GGG - chr2.2:4215511-4215530 MS.gene052037:CDS 20.0%
!! ATAATACATAGTTTATGGTT+AGG + chr2.2:4214825-4214844 None:intergenic 20.0%
!! CAGAAATAATACATAGTTTA+TGG + chr2.2:4214830-4214849 None:intergenic 20.0%
!! TAAGATTAAGGATATGATAA+GGG - chr2.2:4215811-4215830 MS.gene052037:CDS 20.0%
! CAAAGTTTAAATATGAAGAG+TGG - chr2.2:4215447-4215466 MS.gene052037:CDS 25.0%
! GAAATGAAGATGGAATTAAA+GGG - chr2.2:4215849-4215868 MS.gene052037:CDS 25.0%
! GAGGTATAATAGTAAATGAT+TGG - chr2.2:4215510-4215529 MS.gene052037:CDS 25.0%
! GAGTTTATATCAAAACCTAT+TGG + chr2.2:4215428-4215447 None:intergenic 25.0%
! GTAAGATTAAGGATATGATA+AGG - chr2.2:4215810-4215829 MS.gene052037:CDS 25.0%
! TATTGTTGAGAAAATTGAGT+TGG - chr2.2:4215748-4215767 MS.gene052037:CDS 25.0%
! TTTATATCAAAACCTATTGG+TGG + chr2.2:4215425-4215444 None:intergenic 25.0%
!! TTTCTGATATTTTCTTTGGT+TGG - chr2.2:4214844-4214863 MS.gene052037:intron 25.0%
!!! GGATTTTTGTTCTAGATTTA+AGG + chr2.2:4214559-4214578 None:intergenic 25.0%
!!! GTTTTTCATGTTGTTTTTAG+TGG - chr2.2:4214894-4214913 MS.gene052037:intron 25.0%
!!! GTTTTTTAATTGTAAGCTGT+TGG - chr2.2:4215661-4215680 MS.gene052037:CDS 25.0%
!!! TAGCTTGTTATTATTCTCTA+TGG - chr2.2:4214934-4214953 MS.gene052037:intron 25.0%
AAAGTGGAAAGAATTTCATC+TGG - chr2.2:4215390-4215409 MS.gene052037:CDS 30.0%
AAGTGGAAAGAATTTCATCT+GGG - chr2.2:4215391-4215410 MS.gene052037:CDS 30.0%
AATAATCCTATTCCCATTCA+TGG - chr2.2:4214500-4214519 MS.gene052037:CDS 30.0%
ACCCTAAAGTTTGTAAAGAA+TGG - chr2.2:4215267-4215286 MS.gene052037:CDS 30.0%
ACGAATAATACCGAATTCAA+AGG + chr2.2:4215305-4215324 None:intergenic 30.0%
AGAGAATGCTTGTAAGATTA+AGG - chr2.2:4215799-4215818 MS.gene052037:CDS 30.0%
AGCCATTCTTTACAAACTTT+AGG + chr2.2:4215272-4215291 None:intergenic 30.0%
GAAGAATAATCTCTGTGATT+GGG - chr2.2:4215097-4215116 MS.gene052037:CDS 30.0%
GCCATTCTTTACAAACTTTA+GGG + chr2.2:4215271-4215290 None:intergenic 30.0%
GGAAATGAAGATGGAATTAA+AGG - chr2.2:4215848-4215867 MS.gene052037:CDS 30.0%
TGATACAAAGCCTTTGAATT+CGG - chr2.2:4215292-4215311 MS.gene052037:CDS 30.0%
TTAAGGCTAAAGCTAAGAAT+GGG + chr2.2:4214542-4214561 None:intergenic 30.0%
! AGTTTGATGACAAGATTGTA+AGG + chr2.2:4214735-4214754 None:intergenic 30.0%
! GTTGTTGAGTTAAGATGTTT+TGG + chr2.2:4214803-4214822 None:intergenic 30.0%
! GTTTGATGACAAGATTGTAA+GGG + chr2.2:4214734-4214753 None:intergenic 30.0%
! TCGGTATTATTCGTTTGTTT+TGG - chr2.2:4215311-4215330 MS.gene052037:CDS 30.0%
! TTTAAGGCTAAAGCTAAGAA+TGG + chr2.2:4214543-4214562 None:intergenic 30.0%
!! AGAAAATTGAGTTGGTAATG+GGG - chr2.2:4215756-4215775 MS.gene052037:CDS 30.0%
!! ATGATTGGTCGATTTTTCAA+AGG - chr2.2:4215075-4215094 MS.gene052037:CDS 30.0%
!! GAGAAAATTGAGTTGGTAAT+GGG - chr2.2:4215755-4215774 MS.gene052037:CDS 30.0%
!! GTTTTGGATGATGTTTTTGA+AGG + chr2.2:4214787-4214806 None:intergenic 30.0%
!! GTTTTTGAAGGATGGTTTTA+AGG + chr2.2:4214775-4214794 None:intergenic 30.0%
!! TATGGTGATGTTGTAGTTTT+TGG + chr2.2:4214580-4214599 None:intergenic 30.0%
!! TGAGAAAATTGAGTTGGTAA+TGG - chr2.2:4215754-4215773 MS.gene052037:CDS 30.0%
!!! TTTCAGATTTTGACTCTGTT+GGG - chr2.2:4215150-4215169 MS.gene052037:CDS 30.0%
AACAATATCTCACAAGCTGA+TGG - chr2.2:4215047-4215066 MS.gene052037:CDS 35.0%
AACCGGAATATTGAATTTCC+TGG + chr2.2:4215189-4215208 None:intergenic 35.0%
AATTAAAGGGTCGTCTGTTA+GGG - chr2.2:4215862-4215881 MS.gene052037:CDS 35.0%
ATCTTCTCCATAAACCCTAA+TGG + chr2.2:4215476-4215495 None:intergenic 35.0%
ATGAAGAGTGGTTACCATTA+GGG - chr2.2:4215459-4215478 MS.gene052037:CDS 35.0%
CACCAGGAAATTCAATATTC+CGG - chr2.2:4215184-4215203 MS.gene052037:CDS 35.0%
GGAAATTCAATATTCCGGTT+TGG - chr2.2:4215189-4215208 MS.gene052037:CDS 35.0%
GGAAGAATAATCTCTGTGAT+TGG - chr2.2:4215096-4215115 MS.gene052037:CDS 35.0%
GTGAAAGATGGAAATGAAGA+TGG - chr2.2:4215839-4215858 MS.gene052037:CDS 35.0%
TATGAAGAGTGGTTACCATT+AGG - chr2.2:4215458-4215477 MS.gene052037:CDS 35.0%
TCAACTGTTGCTAAAGAACT+TGG - chr2.2:4214870-4214889 MS.gene052037:intron 35.0%
TCAGCTTGTGAGATATTGTT+TGG + chr2.2:4215047-4215066 None:intergenic 35.0%
!! AAGCTGATGGATTTGATGAT+TGG - chr2.2:4215060-4215079 MS.gene052037:CDS 35.0%
!! GAAAATTGAGTTGGTAATGG+GGG - chr2.2:4215757-4215776 MS.gene052037:CDS 35.0%
!! TGGATGATGTTTTTGAAGGA+TGG + chr2.2:4214783-4214802 None:intergenic 35.0%
!! TTGAGTTTTTGGATGTTGTG+TGG + chr2.2:4214612-4214631 None:intergenic 35.0%
!!! GTTTCAGATTTTGACTCTGT+TGG - chr2.2:4215149-4215168 MS.gene052037:CDS 35.0%
!!! GTTTTAAGGAAAGAGAAGCT+TGG + chr2.2:4214761-4214780 None:intergenic 35.0%
AAGAGATGAAAGGGATTGTG+AGG + chr2.2:4214668-4214687 None:intergenic 40.0%
AAGATTGTGGAGACAAAGAG+AGG - chr2.2:4215491-4215510 MS.gene052037:CDS 40.0%
AAGCTGTTGGAAGAAGAGAT+TGG - chr2.2:4215674-4215693 MS.gene052037:CDS 40.0%
AGAATTTCATCTGGGTAGTG+AGG - chr2.2:4215399-4215418 MS.gene052037:CDS 40.0%
AGATTGATGGAGGAATTTGG+TGG + chr2.2:4214645-4214664 None:intergenic 40.0%
AGGAGATTGATGGAGGAATT+TGG + chr2.2:4214648-4214667 None:intergenic 40.0%
AGGGTTTATGGAGAAGATTG+TGG - chr2.2:4215478-4215497 MS.gene052037:CDS 40.0%
AGTCATGGTGTACCTATTCT+TGG - chr2.2:4215617-4215636 MS.gene052037:CDS 40.0%
ATAAGGGATGCTGTGAAAGA+TGG - chr2.2:4215827-4215846 MS.gene052037:CDS 40.0%
ATTAAAGGGTCGTCTGTTAG+GGG - chr2.2:4215863-4215882 MS.gene052037:CDS 40.0%
CAAGTCGAGATATTGTCACA+TGG - chr2.2:4215539-4215558 MS.gene052037:CDS 40.0%
CTTTGAATCAAACGAGCTTC+TGG + chr2.2:4215014-4215033 None:intergenic 40.0%
GAATTAAAGGGTCGTCTGTT+AGG - chr2.2:4215861-4215880 MS.gene052037:CDS 40.0%
GATTGATGGAGGAATTTGGT+GGG + chr2.2:4214644-4214663 None:intergenic 40.0%
GCTACACAAATGATGCAACT+TGG - chr2.2:4215353-4215372 MS.gene052037:CDS 40.0%
GTCATGGTGTACCTATTCTT+GGG - chr2.2:4215618-4215637 MS.gene052037:CDS 40.0%
GTGGTTACCATTAGGGTTTA+TGG - chr2.2:4215466-4215485 MS.gene052037:CDS 40.0%
GTGTTGGAATCATTGAGTCA+TGG - chr2.2:4215602-4215621 MS.gene052037:CDS 40.0%
TATGGTCGGAAGAGATGAAA+GGG + chr2.2:4214677-4214696 None:intergenic 40.0%
TCAGAGTCTGTGAATCTATG+AGG + chr2.2:4214969-4214988 None:intergenic 40.0%
TTATGGTCGGAAGAGATGAA+AGG + chr2.2:4214678-4214697 None:intergenic 40.0%
TTTGTGTTGAGGTTGCTAGA+GGG - chr2.2:4215699-4215718 MS.gene052037:CDS 40.0%
! AGAGATTGGTGTTTGTGTTG+AGG - chr2.2:4215688-4215707 MS.gene052037:CDS 40.0%
! CAGTGTTTTCTGTGTTAGGT+GGG + chr2.2:4214704-4214723 None:intergenic 40.0%
! GTGTCAGTGTTTTCTGTGTT+AGG + chr2.2:4214708-4214727 None:intergenic 40.0%
! TCAGTGTTTTCTGTGTTAGG+TGG + chr2.2:4214705-4214724 None:intergenic 40.0%
! TGTGACAATATCTCGACTTG+TGG + chr2.2:4215539-4215558 None:intergenic 40.0%
! TTTAGTGGTGCTAGTGGTTA+TGG - chr2.2:4214909-4214928 MS.gene052037:intron 40.0%
!! AATATTCCGGTTTGGTCGAT+TGG - chr2.2:4215197-4215216 MS.gene052037:CDS 40.0%
!! GTTGTGTGGTGTGTTGATTA+TGG + chr2.2:4214598-4214617 None:intergenic 40.0%
!!! CGTTTTTGAGTCATTGTGGT+TGG - chr2.2:4215573-4215592 MS.gene052037:CDS 40.0%
!!! GGAGAGAGGTTTTGAGTTTT+TGG + chr2.2:4214623-4214642 None:intergenic 40.0%
!!! GTTGTTTTTAGTGGTGCTAG+TGG - chr2.2:4214903-4214922 MS.gene052037:intron 40.0%
!!! TCTGCGTTTTTGAGTCATTG+TGG - chr2.2:4215569-4215588 MS.gene052037:CDS 40.0%
ACCTACTTTACCTCGTGAAC+CGG + chr2.2:4215240-4215259 None:intergenic 45.0%
AGGGATTGTGAGGAGATTGA+TGG + chr2.2:4214658-4214677 None:intergenic 45.0%
ATGGTGTACCTATTCTTGGG+TGG - chr2.2:4215621-4215640 MS.gene052037:CDS 45.0%
CTATTCCCATTCATGGCACA+GGG - chr2.2:4214507-4214526 MS.gene052037:CDS 45.0%
CTGTGTTAGGTGGGAGATTA+TGG + chr2.2:4214695-4214714 None:intergenic 45.0%
GAACCGGTTGAAAGAACAAC+CGG + chr2.2:4215224-4215243 None:intergenic 45.0%
GATGAGTTCTTATCAGCTGC+TGG - chr2.2:4215890-4215909 MS.gene052037:CDS 45.0%
GATTGTGAGGAGATTGATGG+AGG + chr2.2:4214655-4214674 None:intergenic 45.0%
GGAATCGCGTTGGAAAAAAG+TGG - chr2.2:4215374-4215393 MS.gene052037:CDS 45.0%
GTTAGGTGGGAGATTATGGT+CGG + chr2.2:4214691-4214710 None:intergenic 45.0%
GTTTGTGTTGAGGTTGCTAG+AGG - chr2.2:4215698-4215717 MS.gene052037:CDS 45.0%
TGTGATTGGGTCAACTCAGA+TGG - chr2.2:4215110-4215129 MS.gene052037:CDS 45.0%
TTGTGGTTGGAACTCAGTGT+TGG - chr2.2:4215586-4215605 MS.gene052037:CDS 45.0%
ATGTGACCCTGTGCCATGAA+TGG + chr2.2:4214516-4214535 None:intergenic 50.0%
CCTATTCCCATTCATGGCAC+AGG - chr2.2:4214506-4214525 MS.gene052037:CDS 50.0%
CCTGTGCCATGAATGGGAAT+AGG + chr2.2:4214509-4214528 None:intergenic 50.0%
GATGCAACTTGGAATCGCGT+TGG - chr2.2:4215364-4215383 MS.gene052037:CDS 50.0%
GGACCGGTTGTTCTTTCAAC+CGG - chr2.2:4215218-4215237 MS.gene052037:CDS 50.0%
GGTTCACGAGGTAAAGTAGG+TGG - chr2.2:4215239-4215258 MS.gene052037:CDS 50.0%
TGCTAGAGGGAAGAGTTGTG+AGG - chr2.2:4215712-4215731 MS.gene052037:CDS 50.0%
TGTGACCCTGTGCCATGAAT+GGG + chr2.2:4214515-4214534 None:intergenic 50.0%
TTGGGCTCAACTACTTCACC+AGG - chr2.2:4215168-4215187 MS.gene052037:CDS 50.0%
! ACCGGTTCACGAGGTAAAGT+AGG - chr2.2:4215236-4215255 MS.gene052037:CDS 50.0%
! GTTCTTTCAACCGGTTCACG+AGG - chr2.2:4215227-4215246 MS.gene052037:CDS 50.0%
!! AGTTGGTAATGGGGGAGAGT+GGG - chr2.2:4215765-4215784 MS.gene052037:CDS 50.0%
AAAAACTGCTCCGCCGCCAT+CGG + chr2.2:4215647-4215666 None:intergenic 55.0%
ACCGGTCCAATCGACCAAAC+CGG + chr2.2:4215206-4215225 None:intergenic 55.0%
ACCTATTCTTGGGTGGCCGA+TGG - chr2.2:4215628-4215647 MS.gene052037:CDS 55.0%
TATTCTTGGGTGGCCGATGG+CGG - chr2.2:4215631-4215650 MS.gene052037:CDS 55.0%
TGGGTAGTGAGGCCACCAAT+AGG - chr2.2:4215410-4215429 MS.gene052037:CDS 55.0%
! GGAGGAATTTGGTGGGAGAG+AGG + chr2.2:4214637-4214656 None:intergenic 55.0%
!! GAGTTGGTAATGGGGGAGAG+TGG - chr2.2:4215764-4215783 MS.gene052037:CDS 55.0%
!! GTTGGTAATGGGGGAGAGTG+GGG - chr2.2:4215766-4215785 MS.gene052037:CDS 55.0%
!! TCCGGTTTGGTCGATTGGAC+CGG - chr2.2:4215202-4215221 MS.gene052037:CDS 55.0%
GCCATCGGCCACCCAAGAAT+AGG + chr2.2:4215632-4215651 None:intergenic 60.0%
! TCTTGGGTGGCCGATGGCGG+CGG - chr2.2:4215634-4215653 MS.gene052037:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4214483 4215937 4214483 ID=MS.gene052037
chr2.2 mRNA 4214483 4215937 4214483 ID=MS.gene052037.t1;Parent=MS.gene052037
chr2.2 exon 4214989 4215937 4214989 ID=MS.gene052037.t1.exon1;Parent=MS.gene052037.t1
chr2.2 CDS 4214989 4215937 4214989 ID=cds.MS.gene052037.t1;Parent=MS.gene052037.t1
chr2.2 exon 4214483 4214733 4214483 ID=MS.gene052037.t1.exon2;Parent=MS.gene052037.t1
chr2.2 CDS 4214483 4214733 4214483 ID=cds.MS.gene052037.t1;Parent=MS.gene052037.t1
Gene Sequence

>MS.gene052037

ATGGCAGAGAAACAATCAATAATCCTATTCCCATTCATGGCACAGGGTCACATAATCCCATTCTTAGCTTTAGCCTTAAATCTAGAACAAAAATCCAAAAACTACAACATCACCATAATCAACACACCACACAACATCCAAAAACTCAAAACCTCTCTCCCACCAAATTCCTCCATCAATCTCCTCACAATCCCTTTCATCTCTTCCGACCATAATCTCCCACCTAACACAGAAAACACTGACACTGTCCCTTACAATCTTGTCATCAAACTCATCCAAGCTTCTCTTTCCTTAAAACCATCCTTCAAAAACATCATCCAAAACATCTTAACTCAACAACCTAACCATAAACTATGTATTATTTCTGATATTTTCTTTGGTTGGACTTCAACTGTTGCTAAAGAACTTGGTGTTTTTCATGTTGTTTTTAGTGGTGCTAGTGGTTATGGTTTAGCTTGTTATTATTCTCTATGGATGAATCTTCCTCATAGATTCACAGACTCTGATGAATTTTCATTAAGTGATTTTCCAGAAGCTCGTTTGATTCAAAGAAATCAATTACCAAACAATATCTCACAAGCTGATGGATTTGATGATTGGTCGATTTTTCAAAGGAAGAATAATCTCTGTGATTGGGTCAACTCAGATGGTATTATTTTCAACTCAGTTTCAGATTTTGACTCTGTTGGGCTCAACTACTTCACCAGGAAATTCAATATTCCGGTTTGGTCGATTGGACCGGTTGTTCTTTCAACCGGTTCACGAGGTAAAGTAGGTGGAATTAACCCTAAAGTTTGTAAAGAATGGCTTGATACAAAGCCTTTGAATTCGGTATTATTCGTTTGTTTTGGATCGATGAACACGATTTCTGCTACACAAATGATGCAACTTGGAATCGCGTTGGAAAAAAGTGGAAAGAATTTCATCTGGGTAGTGAGGCCACCAATAGGTTTTGATATAAACTCAAAGTTTAAATATGAAGAGTGGTTACCATTAGGGTTTATGGAGAAGATTGTGGAGACAAAGAGAGGTATAATAGTAAATGATTGGGCACCACAAGTCGAGATATTGTCACATGGATCAGTTTCTGCGTTTTTGAGTCATTGTGGTTGGAACTCAGTGTTGGAATCATTGAGTCATGGTGTACCTATTCTTGGGTGGCCGATGGCGGCGGAGCAGTTTTTTAATTGTAAGCTGTTGGAAGAAGAGATTGGTGTTTGTGTTGAGGTTGCTAGAGGGAAGAGTTGTGAGGTGAAGTATGAAGATATTGTTGAGAAAATTGAGTTGGTAATGGGGGAGAGTGGGGTGAAGATTAGAGAGAATGCTTGTAAGATTAAGGATATGATAAGGGATGCTGTGAAAGATGGAAATGAAGATGGAATTAAAGGGTCGTCTGTTAGGGGTATTGATGAGTTCTTATCAGCTGCTGGAAAGAGCAATAAAACTACTGAATGA

Protein sequence

>MS.gene052037.t1

MAEKQSIILFPFMAQGHIIPFLALALNLEQKSKNYNITIINTPHNIQKLKTSLPPNSSINLLTIPFISSDHNLPPNTENTDTVPYNLVIKLIQASLSLKPSFKNIIQNILTQQPNHKLCIISDIFFGWTSTVAKELGVFHVVFSGASGYGLACYYSLWMNLPHRFTDSDEFSLSDFPEARLIQRNQLPNNISQADGFDDWSIFQRKNNLCDWVNSDGIIFNSVSDFDSVGLNYFTRKFNIPVWSIGPVVLSTGSRGKVGGINPKVCKEWLDTKPLNSVLFVCFGSMNTISATQMMQLGIALEKSGKNFIWVVRPPIEEIGVCVEVARGKSCEVKYEDIVEKIELVMGESGVKIRENACKIKDMIRDAVKDGNEDGIKGSSVRGIDEFLSAAGKSNKTTE