AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060527


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060527.t1 MTR_8g027285 95.541 157 0 1 1 150 1 157 1.10e-107 303
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060527.t1 AT5G42000 81.169 154 22 1 4 150 1 154 9.01e-93 265
MS.gene060527.t1 AT1G01230 80.892 157 23 1 1 150 1 157 1.93e-92 265
MS.gene060527.t1 AT5G42000 80.734 109 14 1 4 105 1 109 2.25e-62 187

Find 35 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGTCTTTGGTTGTTCTCC+TGG 0.279321 8.1:-75134041 MS.gene060527:CDS
ATCCTAACCTTGTGCATGTT+GGG 0.323712 8.1:+75128825 None:intergenic
ATGCACAAGGTTAGGATATT+CGG 0.354060 8.1:-75128819 MS.gene060527:CDS
GTTGTTCTCCTGGGATTGCT+TGG 0.366309 8.1:-75134031 MS.gene060527:CDS
AACTCCATTTGCAGATGATC+AGG 0.373395 8.1:-75132430 MS.gene060527:CDS
GGTTTACGTATCCTGGTGTT+TGG 0.387034 8.1:-75134109 MS.gene060527:CDS
CTGTCTTTGGTTGTTCTCCT+GGG 0.396410 8.1:-75134040 MS.gene060527:CDS
TGCCACCTGCGGATCTGAAC+AGG 0.406149 8.1:-75134142 MS.gene060527:CDS
GAAAGCAGCTCACTCGTAAC+AGG 0.409598 8.1:-75132365 MS.gene060527:CDS
TCCCCAACATGCACAAGGTT+AGG 0.468126 8.1:-75128827 MS.gene060527:CDS
GTGTTCCTGTTCAGATCCGC+AGG 0.489888 8.1:+75134137 None:intergenic
ACAGAATGGTTTACGTATCC+TGG 0.503073 8.1:-75134116 MS.gene060527:CDS
TATCCTAACCTTGTGCATGT+TGG 0.507851 8.1:+75128824 None:intergenic
ATCCCCTGATCATCTGCAAA+TGG 0.508493 8.1:+75132426 None:intergenic
TAGATTGACATGGTGGGAGC+AGG 0.523259 8.1:-75132397 MS.gene060527:CDS
ATGGAGTTCCTTTCTTCCAG+TGG 0.534161 8.1:+75132445 None:intergenic
ATCTGAACAGGAACACAGAA+TGG 0.543897 8.1:-75134130 MS.gene060527:CDS
CCATGATCCATGAAAAGAAG+AGG 0.551222 8.1:+75134069 None:intergenic
ACTCCATTTGCAGATGATCA+GGG 0.556480 8.1:-75132429 MS.gene060527:CDS
ACCGTGTTGAAGAACAGCAT+TGG 0.557220 8.1:+75128879 None:intergenic
ACAATAGTCCAAGCAATCCC+AGG 0.557415 8.1:+75134023 None:intergenic
CGCAACAACTAGCACAATCA+CGG 0.570087 8.1:+75128854 None:intergenic
TCCTAACCTTGTGCATGTTG+GGG 0.573459 8.1:+75128826 None:intergenic
TGGTGGGAGCAGGTCGACAA+TGG 0.574609 8.1:-75132387 MS.gene060527:CDS
ATATATGTTGTCCAAACACC+AGG 0.585932 8.1:+75134098 None:intergenic
CTCATAGTCAGTTGTGTGTG+AGG 0.593542 8.1:+75128905 None:intergenic
AGGAGAACTTACAGAACCAA+AGG 0.601770 8.1:+75132324 None:intergenic
TCCAATGCTGTTCTTCAACA+CGG 0.613434 8.1:-75128880 MS.gene060527:CDS
CTCCATTTGCAGATGATCAG+GGG 0.621400 8.1:-75132428 MS.gene060527:CDS
TCTACAATAGATTGACATGG+TGG 0.624727 8.1:-75132404 MS.gene060527:CDS
GAAGTTCCCCAACATGCACA+AGG 0.633964 8.1:-75128832 MS.gene060527:CDS
CTACAATAGATTGACATGGT+GGG 0.646152 8.1:-75132403 MS.gene060527:CDS
TTCCTGTTCAGATCCGCAGG+TGG 0.663476 8.1:+75134140 None:intergenic
TGTCAAAGCTGTGCCACCTG+CGG 0.675301 8.1:-75134153 MS.gene060527:CDS
GGATCTACAATAGATTGACA+TGG 0.711938 8.1:-75132407 MS.gene060527:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCAAAAAACAAAATAAA+AGG + chr8.1:75129013-75129032 None:intergenic 10.0%
!!! CAGTTTTTATTTTATTTTTT+AGG - chr8.1:75130719-75130738 MS.gene060527:intron 10.0%
!! AAAAACAAAATAAAAGGAAA+AGG + chr8.1:75129007-75129026 None:intergenic 15.0%
!! AAAACAAAATAAAAGGAAAA+GGG + chr8.1:75129006-75129025 None:intergenic 15.0%
!! AAAATTTAAGCAGATAAAAA+TGG - chr8.1:75131250-75131269 MS.gene060527:intron 15.0%
!! AAAGTAACATATATAATGTA+CGG - chr8.1:75133509-75133528 MS.gene060527:intron 15.0%
!! AAATAATCATTATAAAAACC+AGG + chr8.1:75132262-75132281 None:intergenic 15.0%
!! ATTGTAACTAAAAATGATAT+GGG - chr8.1:75132214-75132233 MS.gene060527:intron 15.0%
!! ATTTAGAAAAGATAAAATAG+AGG - chr8.1:75129568-75129587 MS.gene060527:intron 15.0%
!! TAAAATAAAAACTGTGATAT+CGG + chr8.1:75130713-75130732 None:intergenic 15.0%
!! TATAATAGCTATAATATAGT+TGG - chr8.1:75131068-75131087 MS.gene060527:intron 15.0%
!! TTATAATGATTATTTATCGA+AGG - chr8.1:75132267-75132286 MS.gene060527:intron 15.0%
!!! ACCAAAAATAATTTTAGAAA+AGG - chr8.1:75129259-75129278 MS.gene060527:intron 15.0%
!!! ATATGTTACTTTATTCAAAA+AGG + chr8.1:75133501-75133520 None:intergenic 15.0%
!!! CATTTAAAACATTTAGTATT+AGG + chr8.1:75132189-75132208 None:intergenic 15.0%
!!! CTAATACTAAATGTTTTAAA+TGG - chr8.1:75132187-75132206 MS.gene060527:intron 15.0%
!!! GTAAATTTTGGTATTAATAA+TGG + chr8.1:75133894-75133913 None:intergenic 15.0%
!!! TCCTTTTCTAAAATTATTTT+TGG + chr8.1:75129263-75129282 None:intergenic 15.0%
!!! TTTTTTCTAGCAAATATTTA+AGG + chr8.1:75131191-75131210 None:intergenic 15.0%
!! AAACTACAAAATTTCCAAAT+AGG + chr8.1:75129135-75129154 None:intergenic 20.0%
!! AAGAATTATAACAATTGGTT+CGG - chr8.1:75132713-75132732 MS.gene060527:intron 20.0%
!! AAGTGAAGAATTATAACAAT+TGG - chr8.1:75132708-75132727 MS.gene060527:intron 20.0%
!! ATCTTGTGTTAATGATAAAT+AGG - chr8.1:75129527-75129546 MS.gene060527:intron 20.0%
!! GAAAAAGTCAAATCAAAATT+TGG - chr8.1:75132466-75132485 MS.gene060527:intron 20.0%
!! GATTGTAACTAAAAATGATA+TGG - chr8.1:75132213-75132232 MS.gene060527:intron 20.0%
!! TAAATAGTCAAAAACATGTA+TGG - chr8.1:75133421-75133440 MS.gene060527:intron 20.0%
!! TATTTATTGAGTCATGATTT+AGG - chr8.1:75129473-75129492 MS.gene060527:intron 20.0%
!! TCTATTAGAAATAAATGATC+CGG + chr8.1:75132102-75132121 None:intergenic 20.0%
!! TTACTAAATGACTTATTTGA+AGG - chr8.1:75133989-75134008 MS.gene060527:intron 20.0%
!! TTGATTGAAGAAATATTGTT+AGG - chr8.1:75132636-75132655 MS.gene060527:intron 20.0%
!! TTGTAACTAAAAATGATATG+GGG - chr8.1:75132215-75132234 MS.gene060527:intron 20.0%
!!! ATCATTTATAATTTGCACTT+CGG - chr8.1:75132801-75132820 MS.gene060527:intron 20.0%
!!! ATCTAGATTTAAGTTATTCT+TGG + chr8.1:75133665-75133684 None:intergenic 20.0%
!!! ATTTTGGTATTAATAATGGT+TGG + chr8.1:75133890-75133909 None:intergenic 20.0%
!!! GATTTTTTCTTTTCTTTTCT+TGG - chr8.1:75133159-75133178 MS.gene060527:intron 20.0%
!!! GGTATTTAATTTATATTGGT+AGG - chr8.1:75133104-75133123 MS.gene060527:intron 20.0%
!!! GTATTAGTTTAAGAAAATGA+AGG - chr8.1:75129753-75129772 MS.gene060527:intron 20.0%
!!! TAAATAAAGAATGCTTTGTT+TGG - chr8.1:75133927-75133946 MS.gene060527:intron 20.0%
!!! TCATTTTCTTAAACTAATAC+TGG + chr8.1:75129753-75129772 None:intergenic 20.0%
!!! TCATTTTCTTAAACTATTAC+TGG + chr8.1:75129686-75129705 None:intergenic 20.0%
!!! TGTTTAAGAGTTGTAAATTT+TGG + chr8.1:75133906-75133925 None:intergenic 20.0%
!!! TTGTTCATGGATATTTTAAA+GGG - chr8.1:75132133-75132152 MS.gene060527:intron 20.0%
!!! TTTGAATTATGTTGTTTTGA+TGG - chr8.1:75129192-75129211 MS.gene060527:intron 20.0%
!!! TTTGTTATCTACATTATTTG+TGG - chr8.1:75132527-75132546 MS.gene060527:intron 20.0%
!!! TTTGTTCATGGATATTTTAA+AGG - chr8.1:75132132-75132151 MS.gene060527:intron 20.0%
!!! TTTTTTTTTGTTTCTCCTTT+GGG + chr8.1:75132895-75132914 None:intergenic 20.0%
!!! TTTTTTTTTTGTTTCTCCTT+TGG + chr8.1:75132896-75132915 None:intergenic 20.0%
! AAAGTCAAATCAAAATTTGG+AGG - chr8.1:75132469-75132488 MS.gene060527:intron 25.0%
! AAATAGACTATTACAATCCT+TGG - chr8.1:75133591-75133610 MS.gene060527:intron 25.0%
! AAATGATAGATTGTTGTCTA+AGG - chr8.1:75133551-75133570 MS.gene060527:intron 25.0%
! AAGAAAAGAAAAAATCATGC+TGG + chr8.1:75133155-75133174 None:intergenic 25.0%
! ATAGCTATAATATAGTTGGT+AGG - chr8.1:75131072-75131091 MS.gene060527:intron 25.0%
! ATATAAACACTAGCAGTAAT+TGG - chr8.1:75130754-75130773 MS.gene060527:intron 25.0%
! CATAGTCAAACATAATAACA+AGG - chr8.1:75130306-75130325 MS.gene060527:intron 25.0%
! CTATGTATGATATAAATACC+AGG + chr8.1:75131314-75131333 None:intergenic 25.0%
! GAAAGTAATAAATGATAACC+TGG - chr8.1:75132241-75132260 MS.gene060527:intron 25.0%
! GATATCATTTACTTTGTTCA+TGG - chr8.1:75132120-75132139 MS.gene060527:intron 25.0%
! GGAAGACATATATAAATTAG+AGG - chr8.1:75129602-75129621 MS.gene060527:intron 25.0%
! TAAAAACATGCAATACGTTA+TGG + chr8.1:75133226-75133245 None:intergenic 25.0%
! TACTCACAAGTCAATTAAAT+TGG + chr8.1:75130951-75130970 None:intergenic 25.0%
! TATCTTGAAGTTAATTGTGA+TGG - chr8.1:75129428-75129447 MS.gene060527:intron 25.0%
! TCATAATCATATCAAGTATC+TGG + chr8.1:75130198-75130217 None:intergenic 25.0%
! TGTATTGAACCAAACTAAAT+CGG + chr8.1:75131851-75131870 None:intergenic 25.0%
! TTAAATGTAATCACATGTGT+CGG - chr8.1:75129779-75129798 MS.gene060527:intron 25.0%
! TTGATATGATTATGATTTCG+CGG - chr8.1:75130203-75130222 MS.gene060527:intron 25.0%
! TTGGATATTGAACTGTAAAA+AGG - chr8.1:75133398-75133417 MS.gene060527:intron 25.0%
! TTTAAAGGTTTGTATCTGTA+TGG - chr8.1:75131141-75131160 MS.gene060527:intron 25.0%
! TTTATAAAAGCTACTTGACT+GGG - chr8.1:75130381-75130400 MS.gene060527:intron 25.0%
!! AAATAAATGTCACTTCTATG+AGG - chr8.1:75130905-75130924 MS.gene060527:intron 25.0%
!! AATATTTTCTTGTCATTGAC+AGG - chr8.1:75134029-75134048 MS.gene060527:CDS 25.0%
!! AATTTTATCACTTATTCCCA+AGG - chr8.1:75132037-75132056 MS.gene060527:intron 25.0%
!! CGTCGGTATTTAATTTATAT+TGG - chr8.1:75133100-75133119 MS.gene060527:intron 25.0%
!! CTTCAATCAAAACAATTTTG+CGG + chr8.1:75132626-75132645 None:intergenic 25.0%
!! CTTTTGTAAACTTTCTGATA+AGG - chr8.1:75132956-75132975 MS.gene060527:intron 25.0%
!! GTTAATTTGATCTCTTTACA+TGG - chr8.1:75130455-75130474 MS.gene060527:intron 25.0%
!! TAAATTAGAGGTATGCTATT+AGG - chr8.1:75129614-75129633 MS.gene060527:intron 25.0%
!! TTTTATAAAAGCTACTTGAC+TGG - chr8.1:75130380-75130399 MS.gene060527:intron 25.0%
!! TTTTCGTCTGTATCTTAATA+TGG - chr8.1:75130869-75130888 MS.gene060527:intron 25.0%
!!! ATCTATCATTTTTTCCTACA+TGG + chr8.1:75133542-75133561 None:intergenic 25.0%
!!! CAGAAGTTATGTTACTTTAA+AGG - chr8.1:75131126-75131145 MS.gene060527:intron 25.0%
!!! TATAATATAGTTGGTAGGTT+GGG - chr8.1:75131077-75131096 MS.gene060527:intron 25.0%
!!! TCATAACCAGAGTTTTTTAA+GGG + chr8.1:75132583-75132602 None:intergenic 25.0%
!!! TCATCTTCCTTTGATTTTTT+GGG - chr8.1:75130260-75130279 MS.gene060527:intron 25.0%
!!! TCTATCATTTTTTCCTACAT+GGG + chr8.1:75133541-75133560 None:intergenic 25.0%
!!! TGTTCATGGATATTTTAAAG+GGG - chr8.1:75132134-75132153 MS.gene060527:intron 25.0%
!!! TTCATCTTCCTTTGATTTTT+TGG - chr8.1:75130259-75130278 MS.gene060527:intron 25.0%
AAAAGAACCTGAATCTCAAA+GGG + chr8.1:75132941-75132960 None:intergenic 30.0%
AAACTAAACTACTGACATCT+AGG + chr8.1:75130158-75130177 None:intergenic 30.0%
AAAGGATTAATGGGATATAG+AGG + chr8.1:75129974-75129993 None:intergenic 30.0%
AAATGCTACATGAGCTAAAA+TGG + chr8.1:75130336-75130355 None:intergenic 30.0%
AAGGGGGATTCTAAATTATT+TGG - chr8.1:75132151-75132170 MS.gene060527:intron 30.0%
AATGACAAACATACACAGAT+GGG + chr8.1:75132323-75132342 None:intergenic 30.0%
AATGCTACATGAGCTAAAAT+GGG + chr8.1:75130335-75130354 None:intergenic 30.0%
ACGGCAAGTATTAATTAGAT+TGG + chr8.1:75131769-75131788 None:intergenic 30.0%
ACTAAATCCTAATGTGCTAT+TGG - chr8.1:75129855-75129874 MS.gene060527:intron 30.0%
ACTGTATGTATGAGTTTCAT+GGG - chr8.1:75129380-75129399 MS.gene060527:intron 30.0%
AGGGGGATTCTAAATTATTT+GGG - chr8.1:75132152-75132171 MS.gene060527:intron 30.0%
AGTCAAAAACATGTATGGTA+AGG - chr8.1:75133426-75133445 MS.gene060527:intron 30.0%
AGTGAGCTTACAAAAATCTT+TGG - chr8.1:75133787-75133806 MS.gene060527:intron 30.0%
AGTTAACGTAAACTAGCAAT+TGG + chr8.1:75129937-75129956 None:intergenic 30.0%
AGTTTAAAAGTCGAGTTTCT+TGG + chr8.1:75133817-75133836 None:intergenic 30.0%
ATGTTTGTCATTATGACCAA+AGG - chr8.1:75132331-75132350 MS.gene060527:intron 30.0%
ATTTAGTAAAGCTGACACTT+TGG + chr8.1:75129842-75129861 None:intergenic 30.0%
ATTTCATTGTTGCACACTAT+TGG + chr8.1:75131570-75131589 None:intergenic 30.0%
CTTAAAAAACTCTGGTTATG+AGG - chr8.1:75132582-75132601 MS.gene060527:intron 30.0%
GATATATAACCAGCATGATT+GGG + chr8.1:75131292-75131311 None:intergenic 30.0%
GTGTTAATGATAAATAGGTC+AGG - chr8.1:75129532-75129551 MS.gene060527:intron 30.0%
TAATCATCAAAGGACAAATC+AGG + chr8.1:75129112-75129131 None:intergenic 30.0%
TAATGACAAACATACACAGA+TGG + chr8.1:75132324-75132343 None:intergenic 30.0%
TAGTTTACGTTAACTGCAAT+TGG - chr8.1:75129942-75129961 MS.gene060527:intron 30.0%
TAGTTTCCCTTAAAAAACTC+TGG - chr8.1:75132574-75132593 MS.gene060527:intron 30.0%
TCCAAATAGGTAATCATCAA+AGG + chr8.1:75129122-75129141 None:intergenic 30.0%
TGTAAACTTTCTGATAAGGT+GGG - chr8.1:75132960-75132979 MS.gene060527:intron 30.0%
TTAAATGTAACCACATGTGT+CGG - chr8.1:75129712-75129731 MS.gene060527:intron 30.0%
TTCTGTCTCTTCTTATATGT+GGG - chr8.1:75130990-75131009 MS.gene060527:intron 30.0%
TTGTAAACTTTCTGATAAGG+TGG - chr8.1:75132959-75132978 MS.gene060527:intron 30.0%
TTTACTTCCAATAGCACATT+AGG + chr8.1:75129865-75129884 None:intergenic 30.0%
TTTCTGTCTCTTCTTATATG+TGG - chr8.1:75130989-75131008 MS.gene060527:intron 30.0%
! AAATTCTTTTCGCAACTAGA+AGG + chr8.1:75131040-75131059 None:intergenic 30.0%
! AATTCTTTTCGCAACTAGAA+GGG + chr8.1:75131039-75131058 None:intergenic 30.0%
! ATGTAGCTTTTCTATCTACT+TGG - chr8.1:75133737-75133756 MS.gene060527:intron 30.0%
! ATTAGACTTGTGTCATTCTA+TGG - chr8.1:75133372-75133391 MS.gene060527:intron 30.0%
! TCCTTTGATGATTACCTATT+TGG - chr8.1:75129118-75129137 MS.gene060527:intron 30.0%
! TGTAGCTTTTCTATCTACTT+GGG - chr8.1:75133738-75133757 MS.gene060527:intron 30.0%
! TTGTGTCATTCTATGGTATT+TGG - chr8.1:75133379-75133398 MS.gene060527:intron 30.0%
! TTTCTAGCATAATAGTTGCA+AGG + chr8.1:75132078-75132097 None:intergenic 30.0%
!! CTATAATATAGTTGGTAGGT+TGG - chr8.1:75131076-75131095 MS.gene060527:intron 30.0%
!! GTTCATGGATATTTTAAAGG+GGG - chr8.1:75132135-75132154 MS.gene060527:intron 30.0%
!! TAATTGTGATGGACATGATA+AGG - chr8.1:75129439-75129458 MS.gene060527:intron 30.0%
!! TTTGTCTTATCTTGATAGTG+TGG - chr8.1:75130822-75130841 MS.gene060527:intron 30.0%
!!! AATGCAGTGTTTTAAAAACC+GGG - chr8.1:75131349-75131368 MS.gene060527:intron 30.0%
!!! CTCATAACCAGAGTTTTTTA+AGG + chr8.1:75132584-75132603 None:intergenic 30.0%
!!! GAATGCAGTGTTTTAAAAAC+CGG - chr8.1:75131348-75131367 MS.gene060527:intron 30.0%
!!! TAACATATCACTTTTTCCAC+TGG - chr8.1:75130506-75130525 MS.gene060527:intron 30.0%
!!! TATTTTTGGTATCGACATGT+TGG + chr8.1:75129249-75129268 None:intergenic 30.0%
!!! TCAAGCAGTGTTTTTAAAAC+CGG + chr8.1:75131991-75132010 None:intergenic 30.0%
AAAACACTGCATTCAATCTC+TGG + chr8.1:75131342-75131361 None:intergenic 35.0%
AAAATAGAGGACAGAGATCT+TGG - chr8.1:75129581-75129600 MS.gene060527:intron 35.0%
AATGCAGGTATGCAAGTTAA+AGG + chr8.1:75130666-75130685 None:intergenic 35.0%
AATGTTCGTACTATGAAGCA+CGG - chr8.1:75129220-75129239 MS.gene060527:intron 35.0%
AATTTCTGCACCATCTAGTA+TGG + chr8.1:75133330-75133349 None:intergenic 35.0%
ACAATCCTTGGTAAGAAGAT+TGG - chr8.1:75133603-75133622 MS.gene060527:intron 35.0%
ACTAGAAGGGAATAACACAT+AGG + chr8.1:75131026-75131045 None:intergenic 35.0%
AGATATTAAGTGACGCACAA+TGG + chr8.1:75133036-75133055 None:intergenic 35.0%
AGTAATCATATGTGTCGTGT+TGG - chr8.1:75129293-75129312 MS.gene060527:intron 35.0%
AGTCATCTGGTTAAAACATG+CGG - chr8.1:75131903-75131922 MS.gene060527:intron 35.0%
ATAAAAACTGTGATATCGGC+CGG + chr8.1:75130709-75130728 None:intergenic 35.0%
ATATAGTATAGTGACCTGTC+CGG + chr8.1:75131407-75131426 None:intergenic 35.0%
ATATATGTTGTCCAAACACC+AGG + chr8.1:75128872-75128891 None:intergenic 35.0%
ATGCACAAGGTTAGGATATT+CGG - chr8.1:75134148-75134167 MS.gene060527:CDS 35.0%
ATTCCATTGTTGCACACTAT+TGG + chr8.1:75131660-75131679 None:intergenic 35.0%
ATTTGCACTTCGGTCTTTAA+AGG - chr8.1:75132811-75132830 MS.gene060527:intron 35.0%
CAAAAGAACCTGAATCTCAA+AGG + chr8.1:75132942-75132961 None:intergenic 35.0%
CAAAATTTGCGACTGCATTT+GGG + chr8.1:75132410-75132429 None:intergenic 35.0%
CAACTATTATGCTAGAAAGC+CGG - chr8.1:75132080-75132099 MS.gene060527:intron 35.0%
CTACAATAGATTGACATGGT+GGG - chr8.1:75130564-75130583 MS.gene060527:intron 35.0%
CTACCTACCCAAAAAATCAA+AGG + chr8.1:75130270-75130289 None:intergenic 35.0%
CTGCATAGTTGTTTAGTGTA+GGG - chr8.1:75129496-75129515 MS.gene060527:intron 35.0%
CTGTATGTATGAGTTTCATG+GGG - chr8.1:75129381-75129400 MS.gene060527:intron 35.0%
CTTGTCAATTGTTGTGATGA+GGG - chr8.1:75130095-75130114 MS.gene060527:intron 35.0%
GACTGTATGTATGAGTTTCA+TGG - chr8.1:75129379-75129398 MS.gene060527:intron 35.0%
GGATATATAACCAGCATGAT+TGG + chr8.1:75131293-75131312 None:intergenic 35.0%
GGATCTACAATAGATTGACA+TGG - chr8.1:75130560-75130579 MS.gene060527:intron 35.0%
GTAATAGTCTATTTCCCACA+TGG + chr8.1:75133585-75133604 None:intergenic 35.0%
GTTATACACTTGCATTCCTT+GGG + chr8.1:75132056-75132075 None:intergenic 35.0%
TACTGGTATTAACATGTGTC+AGG + chr8.1:75129669-75129688 None:intergenic 35.0%
TCAAAATTTGCGACTGCATT+TGG + chr8.1:75132411-75132430 None:intergenic 35.0%
TCACAACAATTGACAAGGAT+AGG + chr8.1:75130092-75130111 None:intergenic 35.0%
TCTACAATAGATTGACATGG+TGG - chr8.1:75130563-75130582 MS.gene060527:intron 35.0%
TCTTATATGTGGGCATGATA+TGG - chr8.1:75131000-75131019 MS.gene060527:intron 35.0%
TGATAGATTGTTGTCTAAGG+TGG - chr8.1:75133554-75133573 MS.gene060527:intron 35.0%
TTCTATTCTACATGGTGTCT+GGG - chr8.1:75132493-75132512 MS.gene060527:intron 35.0%
TTGATTATGTTGTGTGCTTC+AGG - chr8.1:75130483-75130502 MS.gene060527:intron 35.0%
TTGATTGTTAGCGAGAGAAA+GGG - chr8.1:75131217-75131236 MS.gene060527:intron 35.0%
TTGGAGGTTTCTATTCTACA+TGG - chr8.1:75132485-75132504 MS.gene060527:intron 35.0%
TTTCTATTCTACATGGTGTC+TGG - chr8.1:75132492-75132511 MS.gene060527:intron 35.0%
TTTGATTGTTAGCGAGAGAA+AGG - chr8.1:75131216-75131235 MS.gene060527:intron 35.0%
TTTGCACTTCGGTCTTTAAA+GGG - chr8.1:75132812-75132831 MS.gene060527:intron 35.0%
! AAATCTAGATATGCTTGCTG+AGG - chr8.1:75133675-75133694 MS.gene060527:intron 35.0%
! ATCATGCTGGTTATATATCC+TGG - chr8.1:75131293-75131312 MS.gene060527:intron 35.0%
! ATGCAGTCGCAAATTTTGAA+TGG - chr8.1:75132412-75132431 MS.gene060527:CDS 35.0%
! CTTTTCTATCTACTTGGGTT+GGG - chr8.1:75133743-75133762 MS.gene060527:intron 35.0%
! GTTTTTGACAGTTGTTCCTT+TGG - chr8.1:75130627-75130646 MS.gene060527:intron 35.0%
! TAGATAGTTTTCTGCAGTGA+GGG - chr8.1:75133057-75133076 MS.gene060527:intron 35.0%
! TCACTGTTAGAGTATTTGCT+TGG - chr8.1:75130044-75130063 MS.gene060527:intron 35.0%
! TGATGGACATGATAAGGTTT+CGG - chr8.1:75129445-75129464 MS.gene060527:intron 35.0%
! TGCTTGAATGACATTTGTTG+AGG - chr8.1:75132004-75132023 MS.gene060527:intron 35.0%
! TTCTCATCCTCTTCTTTTCA+TGG - chr8.1:75128891-75128910 MS.gene060527:CDS 35.0%
!! TAAAGCACTGCCAAATACAT+CGG - chr8.1:75129641-75129660 MS.gene060527:intron 35.0%
!! TAATTAATCTGAGGCATCGT+CGG - chr8.1:75133083-75133102 MS.gene060527:intron 35.0%
!! TTTAACTTGCATACCTGCAT+TGG - chr8.1:75130665-75130684 MS.gene060527:intron 35.0%
!!! ACGTATTGCATGTTTTTAGC+TGG - chr8.1:75133228-75133247 MS.gene060527:intron 35.0%
!!! ATACCTGCATTGGTTTTTAG+TGG - chr8.1:75130675-75130694 MS.gene060527:intron 35.0%
!!! ATCATGGTTTTGTCTGTCTT+TGG - chr8.1:75128914-75128933 MS.gene060527:CDS 35.0%
!!! CATGTTTTAACCAGATGACT+TGG + chr8.1:75131903-75131922 None:intergenic 35.0%
!!! CTTCCTTTGATTTTTTGGGT+AGG - chr8.1:75130264-75130283 MS.gene060527:intron 35.0%
!!! GTTTTTAGTGGTGTTTGTTC+CGG - chr8.1:75130687-75130706 MS.gene060527:intron 35.0%
AACTCCATTTGCAGATGATC+AGG - chr8.1:75130537-75130556 MS.gene060527:intron 40.0%
AATCCTTTGCCATTGGCATT+TGG - chr8.1:75129986-75130005 MS.gene060527:intron 40.0%
ACACCACTAAAAACCAATGC+AGG + chr8.1:75130681-75130700 None:intergenic 40.0%
ACAGAATGGTTTACGTATCC+TGG - chr8.1:75128851-75128870 MS.gene060527:CDS 40.0%
ACGTCAAAGCTTGCAACTTA+TGG + chr8.1:75133306-75133325 None:intergenic 40.0%
ACTCCATTTGCAGATGATCA+GGG - chr8.1:75130538-75130557 MS.gene060527:intron 40.0%
AGACTGCTCATGTATTGAAC+CGG - chr8.1:75131428-75131447 MS.gene060527:intron 40.0%
AGCTCATGTAGCATTTAGTG+AGG - chr8.1:75130340-75130359 MS.gene060527:intron 40.0%
AGGAGAACTTACAGAACCAA+AGG + chr8.1:75130646-75130665 None:intergenic 40.0%
AGTAAAGCTGACACTTTGGA+TGG + chr8.1:75129838-75129857 None:intergenic 40.0%
AGTGATACAACCAAGTCATC+TGG - chr8.1:75131890-75131909 MS.gene060527:intron 40.0%
ATCCTAACCTTGTGCATGTT+GGG + chr8.1:75134145-75134164 None:intergenic 40.0%
ATCTGAACAGGAACACAGAA+TGG - chr8.1:75128837-75128856 MS.gene060527:CDS 40.0%
ATTGAAAGTAGCCTGTACCA+GGG - chr8.1:75131623-75131642 MS.gene060527:intron 40.0%
CATACTTAACATGAGCCCAA+AGG - chr8.1:75132877-75132896 MS.gene060527:intron 40.0%
CCAAACTAAATCGGATGACT+TGG + chr8.1:75131842-75131861 None:intergenic 40.0%
CCAAGTCATCCGATTTAGTT+TGG - chr8.1:75131839-75131858 MS.gene060527:intron 40.0%
CCAATCCAATCTTCTTACCA+AGG + chr8.1:75133611-75133630 None:intergenic 40.0%
CCATGATCCATGAAAAGAAG+AGG + chr8.1:75128901-75128920 None:intergenic 40.0%
CCATTAAGTCAGTTGTTCGT+TGG - chr8.1:75131685-75131704 MS.gene060527:intron 40.0%
CCTATTTAGAGAGTCAGTAG+AGG - chr8.1:75133260-75133279 MS.gene060527:intron 40.0%
CCTCATCACAACAATTGACA+AGG + chr8.1:75130097-75130116 None:intergenic 40.0%
CCTTGGTAAGAAGATTGGAT+TGG - chr8.1:75133608-75133627 MS.gene060527:intron 40.0%
CCTTGTCAATTGTTGTGATG+AGG - chr8.1:75130094-75130113 MS.gene060527:intron 40.0%
CTAAACTACTGACATCTAGG+AGG + chr8.1:75130155-75130174 None:intergenic 40.0%
CTTCTGTTGTCTCATGTCAT+GGG - chr8.1:75129899-75129918 MS.gene060527:intron 40.0%
CTTTGACGTACCATACTAGA+TGG - chr8.1:75133317-75133336 MS.gene060527:intron 40.0%
GCCAATGGCAAAGGATTAAT+GGG + chr8.1:75129983-75130002 None:intergenic 40.0%
GCTGCATAGTTGTTTAGTGT+AGG - chr8.1:75129495-75129514 MS.gene060527:intron 40.0%
GGTTATACACTTGCATTCCT+TGG + chr8.1:75132057-75132076 None:intergenic 40.0%
GTCATTTCTTTGCTCCTCTA+AGG + chr8.1:75132847-75132866 None:intergenic 40.0%
TAAGCCTGTATGAACTGATG+TGG - chr8.1:75131462-75131481 MS.gene060527:intron 40.0%
TAGGAGGAACAAAGATCTGA+AGG + chr8.1:75130139-75130158 None:intergenic 40.0%
TATCCTAACCTTGTGCATGT+TGG + chr8.1:75134146-75134165 None:intergenic 40.0%
TATTGAAAGTAGCCTGTACC+AGG - chr8.1:75131622-75131641 MS.gene060527:intron 40.0%
TCCAATGCTGTTCTTCAACA+CGG - chr8.1:75134087-75134106 MS.gene060527:CDS 40.0%
TCCCATTAATCCTTTGCCAT+TGG - chr8.1:75129979-75129998 MS.gene060527:intron 40.0%
TCTATTCTACATGGTGTCTG+GGG - chr8.1:75132494-75132513 MS.gene060527:intron 40.0%
TCTGTCACAGTCTCTTGATT+TGG - chr8.1:75130009-75130028 MS.gene060527:intron 40.0%
TGCCAATGGCAAAGGATTAA+TGG + chr8.1:75129984-75130003 None:intergenic 40.0%
TGTAGTCTCTTAGCTTCACT+AGG - chr8.1:75132294-75132313 MS.gene060527:intron 40.0%
TTATTTGTGGTGAAACTGCG+TGG - chr8.1:75132540-75132559 MS.gene060527:intron 40.0%
! CCAACGAACAACTGACTTAA+TGG + chr8.1:75131688-75131707 None:intergenic 40.0%
! CCTCTTCTTTTCATGGATCA+TGG - chr8.1:75128898-75128917 MS.gene060527:CDS 40.0%
! CTAGATAGTTTTCTGCAGTG+AGG - chr8.1:75133056-75133075 MS.gene060527:intron 40.0%
! GCTTTTCTATCTACTTGGGT+TGG - chr8.1:75133742-75133761 MS.gene060527:intron 40.0%
! GGTAAGAAGATTGGATTGGA+GGG - chr8.1:75133612-75133631 MS.gene060527:intron 40.0%
! GTTGGTAGGTTGGGTTTATT+TGG - chr8.1:75131086-75131105 MS.gene060527:intron 40.0%
! TACGTTATGGTACTAGCTCT+TGG + chr8.1:75133213-75133232 None:intergenic 40.0%
! TGGTAAGAAGATTGGATTGG+AGG - chr8.1:75133611-75133630 MS.gene060527:intron 40.0%
!! ACAATTGGTTCGGAAATCAG+CGG - chr8.1:75132723-75132742 MS.gene060527:intron 40.0%
!! AGCAAATCCCTTTGAGATTC+AGG - chr8.1:75132931-75132950 MS.gene060527:intron 40.0%
!! CCTCTACTGACTCTCTAAAT+AGG + chr8.1:75133263-75133282 None:intergenic 40.0%
!! CTTTGCTCCTCTAAGGTAAT+GGG + chr8.1:75132840-75132859 None:intergenic 40.0%
!! TATCTACTTGGGTTGGGAAA+GGG - chr8.1:75133749-75133768 MS.gene060527:intron 40.0%
!! TCTTTGCTCCTCTAAGGTAA+TGG + chr8.1:75132841-75132860 None:intergenic 40.0%
!! TGAGGGCGTTAATTAATCTG+AGG - chr8.1:75133074-75133093 MS.gene060527:intron 40.0%
!!! CACTTTTTCCACTGGAAGAA+AGG - chr8.1:75130514-75130533 MS.gene060527:intron 40.0%
!!! CAGTGTTTTTAAAACCGGCT+CGG + chr8.1:75131986-75132005 None:intergenic 40.0%
AAAACATGCGGTTCGACTAG+TGG - chr8.1:75131915-75131934 MS.gene060527:intron 45.0%
AAGCTGACACTTTGGATGGA+AGG + chr8.1:75129834-75129853 None:intergenic 45.0%
ACAATAGTCCAAGCAATCCC+AGG + chr8.1:75128947-75128966 None:intergenic 45.0%
ACACTTTGATGAGAGGCCTT+TGG + chr8.1:75132350-75132369 None:intergenic 45.0%
ACATACAACACCGACACATG+TGG + chr8.1:75129725-75129744 None:intergenic 45.0%
ACCGTGTTGAAGAACAGCAT+TGG + chr8.1:75134091-75134110 None:intergenic 45.0%
ACTTTCTGATAAGGTGGGCA+TGG - chr8.1:75132965-75132984 MS.gene060527:intron 45.0%
AGACCAAATGCCAATGGCAA+AGG + chr8.1:75129992-75130011 None:intergenic 45.0%
ATCCCCTGATCATCTGCAAA+TGG + chr8.1:75130544-75130563 None:intergenic 45.0%
ATGGAGTTCCTTTCTTCCAG+TGG + chr8.1:75130525-75130544 None:intergenic 45.0%
ATGTAGCATTTAGTGAGGCG+AGG - chr8.1:75130345-75130364 MS.gene060527:intron 45.0%
CAGACCACATCAGTTCATAC+AGG + chr8.1:75131469-75131488 None:intergenic 45.0%
CAGGCTTATACGTGTTTGAC+CGG + chr8.1:75131450-75131469 None:intergenic 45.0%
CGCAACAACTAGCACAATCA+CGG + chr8.1:75134116-75134135 None:intergenic 45.0%
CTCATAGTCAGTTGTGTGTG+AGG + chr8.1:75134065-75134084 None:intergenic 45.0%
CTCCATTTGCAGATGATCAG+GGG - chr8.1:75130539-75130558 MS.gene060527:intron 45.0%
CTGTATGAACTGATGTGGTC+TGG - chr8.1:75131467-75131486 MS.gene060527:intron 45.0%
CTGTCTTTGGTTGTTCTCCT+GGG - chr8.1:75128927-75128946 MS.gene060527:intron 45.0%
CTTCACGACACTTTGATGAG+AGG + chr8.1:75132357-75132376 None:intergenic 45.0%
GATAGGCTCACACGAGATAT+TGG + chr8.1:75130075-75130094 None:intergenic 45.0%
GCTTCTGTTGTCTCATGTCA+TGG - chr8.1:75129898-75129917 MS.gene060527:intron 45.0%
GGTTTACGTATCCTGGTGTT+TGG - chr8.1:75128858-75128877 MS.gene060527:CDS 45.0%
GTATTGAAAGTAGCCTGCAC+CGG - chr8.1:75131531-75131550 MS.gene060527:intron 45.0%
GTGAAAACTCCCAATCATGC+TGG - chr8.1:75131280-75131299 MS.gene060527:intron 45.0%
GTTGGGAAAGGGTTTGATTG+TGG - chr8.1:75133760-75133779 MS.gene060527:intron 45.0%
TATTGAAAGTAGCCTGCACC+GGG - chr8.1:75131532-75131551 MS.gene060527:intron 45.0%
TCCTAACCTTGTGCATGTTG+GGG + chr8.1:75134144-75134163 None:intergenic 45.0%
TCTCCCTCTTCACACTCTTA+TGG + chr8.1:75133642-75133661 None:intergenic 45.0%
TCTGTCTTTGGTTGTTCTCC+TGG - chr8.1:75128926-75128945 MS.gene060527:intron 45.0%
TGTAGCATTTAGTGAGGCGA+GGG - chr8.1:75130346-75130365 MS.gene060527:intron 45.0%
TGTGACAGACCAAATGCCAA+TGG + chr8.1:75129998-75130017 None:intergenic 45.0%
TGTTGTGATGAGGGATGACT+GGG - chr8.1:75130104-75130123 MS.gene060527:intron 45.0%
TTGTTGTGATGAGGGATGAC+TGG - chr8.1:75130103-75130122 MS.gene060527:intron 45.0%
! AGAAGATTGGATTGGAGGGT+AGG - chr8.1:75133616-75133635 MS.gene060527:intron 45.0%
! AGGCCATAAGAGTGTGAAGA+GGG - chr8.1:75133636-75133655 MS.gene060527:intron 45.0%
! ATATGTGTCGTGTTGGTGTC+GGG - chr8.1:75129300-75129319 MS.gene060527:intron 45.0%
! CATATGTGTCGTGTTGGTGT+CGG - chr8.1:75129299-75129318 MS.gene060527:intron 45.0%
! GATTGTTGTCTAAGGTGGCT+AGG - chr8.1:75133559-75133578 MS.gene060527:intron 45.0%
! TAGGCCATAAGAGTGTGAAG+AGG - chr8.1:75133635-75133654 MS.gene060527:intron 45.0%
! TTATTACCGAAAGCGTGTCC+CGG + chr8.1:75129345-75129364 None:intergenic 45.0%
!! CACATGTGTCGGTGTTGTAT+TGG - chr8.1:75129723-75129742 MS.gene060527:intron 45.0%
!! CGGTAAGGGTATTAAGTCAC+TGG + chr8.1:75131954-75131973 None:intergenic 45.0%
!! CTATCTACTTGGGTTGGGAA+AGG - chr8.1:75133748-75133767 MS.gene060527:intron 45.0%
!!! CAGTGTTTTAAAAACCGGGC+TGG - chr8.1:75131353-75131372 MS.gene060527:intron 45.0%
!! TCTATTTATTATTTAAAAAA+CGG + chr8.1:75131788-75131807 None:intergenic 5.0%
!! TTTATCATAATTTAAATAAT+TGG - chr8.1:75132768-75132787 MS.gene060527:intron 5.0%
!!! AATATTTATAGAAATTTTTA+GGG - chr8.1:75131815-75131834 MS.gene060527:intron 5.0%
!!! TAATATTTATAGAAATTTTT+AGG - chr8.1:75131814-75131833 MS.gene060527:intron 5.0%
AAGGGCTCCCATTACCTTAG+AGG - chr8.1:75132830-75132849 MS.gene060527:intron 50.0%
AAGTCACTGGCCAAACCACA+GGG + chr8.1:75131941-75131960 None:intergenic 50.0%
ACTAGGACATGTTGGACACC+GGG - chr8.1:75129324-75129343 MS.gene060527:intron 50.0%
CACTAGGACATGTTGGACAC+CGG - chr8.1:75129323-75129342 MS.gene060527:intron 50.0%
CAGACTGGGAATTGGACCTA+CGG - chr8.1:75131381-75131400 MS.gene060527:intron 50.0%
CTCGGTGATCAACTCGGTAA+GGG + chr8.1:75131968-75131987 None:intergenic 50.0%
CTGTTGTCTCATGTCATGGG+TGG - chr8.1:75129902-75129921 MS.gene060527:intron 50.0%
GAAAGCAGCTCACTCGTAAC+AGG - chr8.1:75130602-75130621 MS.gene060527:intron 50.0%
GAAGTTCCCCAACATGCACA+AGG - chr8.1:75134135-75134154 MS.gene060527:CDS 50.0%
GGGCCAATAGTGTGCAACAA+TGG - chr8.1:75131564-75131583 MS.gene060527:intron 50.0%
GTAGCATTTAGTGAGGCGAG+GGG - chr8.1:75130347-75130366 MS.gene060527:intron 50.0%
GTTGTTCTCCTGGGATTGCT+TGG - chr8.1:75128936-75128955 MS.gene060527:intron 50.0%
TAAGTCACTGGCCAAACCAC+AGG + chr8.1:75131942-75131961 None:intergenic 50.0%
TCCCCAACATGCACAAGGTT+AGG - chr8.1:75134140-75134159 MS.gene060527:CDS 50.0%
TCTGATAAGGTGGGCATGGT+TGG - chr8.1:75132969-75132988 MS.gene060527:intron 50.0%
TGATGAGGGATGACTGGGTA+GGG - chr8.1:75130109-75130128 MS.gene060527:intron 50.0%
TGTACGGACAACACCCATGT+AGG - chr8.1:75133525-75133544 MS.gene060527:intron 50.0%
TTGTTGCACACTATTGGCCC+TGG + chr8.1:75131564-75131583 None:intergenic 50.0%
! TAGATTGACATGGTGGGAGC+AGG - chr8.1:75130570-75130589 MS.gene060527:intron 50.0%
!! GTGTCAGGTGCCGATGTATT+TGG + chr8.1:75129654-75129673 None:intergenic 50.0%
!!! GTTTTAAAAACCGGGCTGGC+TGG - chr8.1:75131357-75131376 MS.gene060527:intron 50.0%
CTAAGGTGGCTAGGCCATGT+GGG - chr8.1:75133568-75133587 MS.gene060527:intron 55.0%
CTCATGTCATGGGTGGAGAG+TGG - chr8.1:75129909-75129928 MS.gene060527:intron 55.0%
GATGAGGGATGACTGGGTAG+GGG - chr8.1:75130110-75130129 MS.gene060527:intron 55.0%
GTGATGAGGGATGACTGGGT+AGG - chr8.1:75130108-75130127 MS.gene060527:intron 55.0%
GTGTTCCTGTTCAGATCCGC+AGG + chr8.1:75128833-75128852 None:intergenic 55.0%
TGTCAAAGCTGTGCCACCTG+CGG - chr8.1:75128814-75128833 MS.gene060527:CDS 55.0%
TGTCGGGCACTAGGACATGT+TGG - chr8.1:75129316-75129335 MS.gene060527:intron 55.0%
TTCCTGTTCAGATCCGCAGG+TGG + chr8.1:75128830-75128849 None:intergenic 55.0%
! CTTTGGATGGAAGGCGTGTC+TGG + chr8.1:75129825-75129844 None:intergenic 55.0%
! GCTCGGTGATCAACTCGGTA+AGG + chr8.1:75131969-75131988 None:intergenic 55.0%
! TATTGGCCCTGGTTCGATCC+CGG + chr8.1:75131553-75131572 None:intergenic 55.0%
! TCTAAGGTGGCTAGGCCATG+TGG - chr8.1:75133567-75133586 MS.gene060527:intron 55.0%
! TGGCTGGTCAGACTGGGAAT+TGG - chr8.1:75131373-75131392 MS.gene060527:intron 55.0%
!! AACCGGCTCGGTGATCAACT+CGG + chr8.1:75131974-75131993 None:intergenic 55.0%
!! TACCGAGTTGATCACCGAGC+CGG - chr8.1:75131969-75131988 MS.gene060527:intron 55.0%
AATTGGACCTACGGCCGGAC+AGG - chr8.1:75131390-75131409 MS.gene060527:intron 60.0%
ATAGTGACCTGTCCGGCCGT+AGG + chr8.1:75131400-75131419 None:intergenic 60.0%
CCTGTACCAGGGTCGAACCA+GGG - chr8.1:75131634-75131653 MS.gene060527:intron 60.0%
CGACTAGTGGCCCTGTGGTT+TGG - chr8.1:75131928-75131947 MS.gene060527:intron 60.0%
CTGGGAATTGGACCTACGGC+CGG - chr8.1:75131385-75131404 MS.gene060527:intron 60.0%
TGCCACCTGCGGATCTGAAC+AGG - chr8.1:75128825-75128844 MS.gene060527:CDS 60.0%
TGGACACCGGGACACGCTTT+CGG - chr8.1:75129336-75129355 MS.gene060527:intron 60.0%
TGGTGGGAGCAGGTCGACAA+TGG - chr8.1:75130580-75130599 MS.gene060527:intron 60.0%
! TATTGGCCCTGGTTCGACCC+TGG + chr8.1:75131643-75131662 None:intergenic 60.0%
!! TCGTGTTGGTGTCGGGCACT+AGG - chr8.1:75129307-75129326 MS.gene060527:intron 60.0%
CCTGCACCGGGATCGAACCA+GGG - chr8.1:75131544-75131563 MS.gene060527:intron 65.0%
CGGTTCGACTAGTGGCCCTG+TGG - chr8.1:75131923-75131942 MS.gene060527:intron 65.0%
GCCTGTACCAGGGTCGAACC+AGG - chr8.1:75131633-75131652 MS.gene060527:intron 65.0%
! CCCTGGTTCGACCCTGGTAC+AGG + chr8.1:75131637-75131656 None:intergenic 65.0%
CCCAGTCTGACCAGCCAGCC+CGG + chr8.1:75131370-75131389 None:intergenic 70.0%
GCCTGCACCGGGATCGAACC+AGG - chr8.1:75131543-75131562 MS.gene060527:intron 70.0%
! CCCTGGTTCGATCCCGGTGC+AGG + chr8.1:75131547-75131566 None:intergenic 70.0%
!! ACCGGGCTGGCTGGTCAGAC+TGG - chr8.1:75131366-75131385 MS.gene060527:intron 70.0%
!! CCGGGCTGGCTGGTCAGACT+GGG - chr8.1:75131367-75131386 MS.gene060527:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 75128800 75134189 75128800 ID=MS.gene060527
chr8.1 mRNA 75128800 75134189 75128800 ID=MS.gene060527.t1;Parent=MS.gene060527
chr8.1 exon 75134025 75134189 75134025 ID=MS.gene060527.t1.exon1;Parent=MS.gene060527.t1
chr8.1 CDS 75134025 75134189 75134025 ID=cds.MS.gene060527.t1;Parent=MS.gene060527.t1
chr8.1 exon 75132336 75132484 75132336 ID=MS.gene060527.t1.exon2;Parent=MS.gene060527.t1
chr8.1 CDS 75132336 75132484 75132336 ID=cds.MS.gene060527.t1;Parent=MS.gene060527.t1
chr8.1 exon 75128800 75128938 75128800 ID=MS.gene060527.t1.exon3;Parent=MS.gene060527.t1
chr8.1 CDS 75128800 75128938 75128800 ID=cds.MS.gene060527.t1;Parent=MS.gene060527.t1
Gene Sequence

>MS.gene060527

ATGGCTAATCTGTATGTCAAAGCTGTGCCACCTGCGGATCTGAACAGGAACACAGAATGGTTTACGTATCCTGGTGTTTGGACAACATATATTCTCATCCTCTTCTTTTCATGGATCATGGTTTTGTCTGTCTTTGGTTGTTCTCCTGGGATTGCTTGGACTATTGTTAATCTCGCTCATTTTCTTGTATTCTTCTTCTTTTACCCTTTTCCTTTTATTTTGTTTTTTGAATTGTTTGAATTGTTGTTGAATTGTTATTGAATTTTGTGTTTTTGATGATTTGATGTTTAGTTTTTGTTTTTGCTGTTGCCTGATTTGTCCTTTGATGATTACCTATTTGGAAATTTTGTAGTTTAAGTTTTTTTTAAGTGTGTTTGTGTTGATTAATATGTTTTGAATTATGTTGTTTTGATGGATATGAATGTTCGTACTATGAAGCACGGACACCAACATGTCGATACCAAAAATAATTTTAGAAAAGGAGATAATTGAAAGTAATCATATGTGTCGTGTTGGTGTCGGGCACTAGGACATGTTGGACACCGGGACACGCTTTCGGTAATAAGTGTCTGTGCTACAGACTGTATGTATGAGTTTCATGGGGTTTGTGAGATGAGAGATTGAATGTTATCTTGAAGTTAATTGTGATGGACATGATAAGGTTTCGGATGTTTATTTATTGAGTCATGATTTAGGCTGCATAGTTGTTTAGTGTAGGGAGTGCTACATCTTGTGTTAATGATAAATAGGTCAGGATTTTATCTTAATATTTAGAAAAGATAAAATAGAGGACAGAGATCTTGGAAGACATATATAAATTAGAGGTATGCTATTAGGAGTATAAAGCACTGCCAAATACATCGGCACCTGACACATGTTAATACCAGTAATAGTTTAAGAAAATGAAAGTGATTAAATGTAACCACATGTGTCGGTGTTGTATGTTAATACCAGTATTAGTTTAAGAAAATGAAGGTGATTAAATGTAATCACATGTGTCGGTGTTGTATTGGTGTCAGATACCAGACACGCCTTCCATCCAAAGTGTCAGCTTTACTAAATCCTAATGTGCTATTGGAAGTAAACAGTGCTCAATTTGCTTCTGTTGTCTCATGTCATGGGTGGAGAGTGGCTCCAATTGCTAGTTTACGTTAACTGCAATTGGTATTCTCCTCTATATCCCATTAATCCTTTGCCATTGGCATTTGGTCTGTCACAGTCTCTTGATTTGGATAGTTGATTCATCACTGTTAGAGTATTTGCTTGGAGTGTCCAATATCTCGTGTGAGCCTATCCTTGTCAATTGTTGTGATGAGGGATGACTGGGTAGGGGAGTCCTTCAGATCTTTGTTCCTCCTAGATGTCAGTAGTTTAGTTTATTTGTTTGACTGAGAGCCAGATACTTGATATGATTATGATTTCGCGGTCACTTAAAATGAATTGACTGTCATATTTTTTCTTCATCTTCCTTTGATTTTTTGGGTAGGTAGACGTATTATTATACGTCATAGTCAAACATAATAACAAGGCAACCCATTTTAGCTCATGTAGCATTTAGTGAGGCGAGGGGTGAGACTATTTTTTATAAAAGCTACTTGACTGGGTCAAGTTATAAATTAACATTTTGTTGTCAGATACTGTTTATGAAATGTCATGTTAATTTGATCTCTTTACATGGCTTGATTGATTATGTTGTGTGCTTCAGGTAACATATCACTTTTTCCACTGGAAGAAAGGAACTCCATTTGCAGATGATCAGGGGATCTACAATAGATTGACATGGTGGGAGCAGGTCGACAATGGAAAGCAGCTCACTCGTAACAGGAAGTTTTTGACAGTTGTTCCTTTGGTTCTGTAAGTTCTCCTTTAACTTGCATACCTGCATTGGTTTTTAGTGGTGTTTGTTCCGGCCGATATCACAGTTTTTATTTTATTTTTTAGGTTCAGTCATGTTATATAAACACTAGCAGTAATTGGTCTGCACTAACTAATACATTGTTTACAGTGATGCTGACAAACTTATTTGTCTTATCTTGATAGTGTGGTTATAACTTTTACATGTTATGCTTTTTTCGTCTGTATCTTAATATGGTACATGAACTTGCAAATAAATGTCACTTCTATGAGGAAATCATGAGTCATGCATGTCCAATTTAATTGACTTGTGAGTATCGATAGAGCAAGATTCTTTTCTGTCTCTTCTTATATGTGGGCATGATATGGCCTATGTGTTATTCCCTTCTAGTTGCGAAAAGAATTTCTCTCAGCTATAATAGCTATAATATAGTTGGTAGGTTGGGTTTATTTGGAATTACTGTTGCTTGTTCAGAAGTTATGTTACTTTAAAGGTTTGTATCTGTATGGTTTCAAGTGACTGTTGTCACAATTCCTTAAATATTTGCTAGAAAAAACGAAGTTTGATTGTTAGCGAGAGAAAGGGAAATAATATTAAAATTTAAGCAGATAAAAATGGCGTTCATGTGAAAACTCCCAATCATGCTGGTTATATATCCTGGTATTTATATCATACATAGTTCAACCAGAGATTGAATGCAGTGTTTTAAAAACCGGGCTGGCTGGTCAGACTGGGAATTGGACCTACGGCCGGACAGGTCACTATACTATATTAGACTGCTCATGTATTGAACCGGTCAAACACGTATAAGCCTGTATGAACTGATGTGGTCTGGTTCAATGAAAATATCAGTGCTTTTATTGAAAAGAAAATTATGTATTGAAAGTAGCCTGCACCGGGATCGAACCAGGGCCAATAGTGTGCAACAATGAAATATTGCAGTGCTTTTATTGAAAAAAAAATTATATATTGAAAGTAGCCTGTACCAGGGTCGAACCAGGGCCAATAGTGTGCAACAATGGAATTTCTGCCATTAAGTCAGTTGTTCGTTGGTGACACTCGTGTTGCTTATAACGTATATATACAATATACAGATAAGATTTTAGAACATCCAATCTAATTAATACTTGCCGTTTTTTAAATAATAAATAGACATGCATAATATTTATAGAAATTTTTAGGGACCAAGTCATCCGATTTAGTTTGGTTCAATACAAACAATTTTTTAGAGACAGAGTGATACAACCAAGTCATCTGGTTAAAACATGCGGTTCGACTAGTGGCCCTGTGGTTTGGCCAGTGACTTAATACCCTTACCGAGTTGATCACCGAGCCGGTTTTAAAAACACTGCTTGAATGACATTTGTTGAGGAAAGAGTGAGAATTTTATCACTTATTCCCAAGGAATGCAAGTGTATAACCTTGCAACTATTATGCTAGAAAGCCGGATCATTTATTTCTAATAGATATCATTTACTTTGTTCATGGATATTTTAAAGGGGGATTCTAAATTATTTGGGTAGCTAATTAGCCTAATACTAAATGTTTTAAATGGATTGATTGTAACTAAAAATGATATGGGGCGAGAAAGTAATAAATGATAACCTGGTTTTTATAATGATTATTTATCGAAGGTCTTTGTAGTCTCTTAGCTTCACTAGGCTGCCCATCTGTGTATGTTTGTCATTATGACCAAAGGCCTCTCATCAAAGTGTCGTGAAGAACTATTGAGTGCATACGTAGTTTAAAAATCCCAAATGCAGTCGCAAATTTTGAATGGTAAATTTAGCTAAAAACTTGTATAAAAAATAGAAAAAGTCAAATCAAAATTTGGAGGTTTCTATTCTACATGGTGTCTGGGGTTTGACTTAATTTGTTATCTACATTATTTGTGGTGAAACTGCGTGGCTTCATAACTCTAGTTTCCCTTAAAAAACTCTGGTTATGAGGATTAACGCTTAGCTTTCTCCGCAAAATTGTTTTGATTGAAGAAATATTGTTAGGTGTAACAAGAATTAGTTTGACTTCTCTAAAGTGAAGAGTGTATGAAAAAAAGTGAAGAATTATAACAATTGGTTCGGAAATCAGCGGAATCTCTTAACAACTTCACGAGTTTATCATAATTTAAATAATTGGTTTTTCAGTAATCATTTATAATTTGCACTTCGGTCTTTAAAGGGCTCCCATTACCTTAGAGGAGCAAAGAAATGACAACTAATAAGCATACTTAACATGAGCCCAAAGGAGAAACAAAAAAAAAAAGTCAAACAAGTTAAAGCAAATCCCTTTGAGATTCAGGTTCTTTTGTAAACTTTCTGATAAGGTGGGCATGGTTGGCTGACTATCTTGTTTTGTATTGATACGTTTTGACGAAATTTCCATTGTGCGTCACTTAATATCTCTAGATAGTTTTCTGCAGTGAGGGCGTTAATTAATCTGAGGCATCGTCGGTATTTAATTTATATTGGTAGGAATGTGCACTTTGCATTATTTACTACCAGCATGATTTTTTCTTTTCTTTTCTTGGTTTTGAGTGTGTTTACTAGAGAGCATATCCAAGAGCTAGTACCATAACGTATTGCATGTTTTTAGCTGGTGAAGTTGTCCTATTTAGAGAGTCAGTAGAGGTAAAAATTAGATATACTACTCCATAAGTTGCAAGCTTTGACGTACCATACTAGATGGTGCAGAAATTGACACATGTAAAATACACGACTATTAGACTTGTGTCATTCTATGGTATTTGGATATTGAACTGTAAAAAGGTAAATAGTCAAAAACATGTATGGTAAGGCAAACAAGACAAGCTAAATCATCAAAACATGTATCATATAGTTTTTTTTCCTTTTTGAATAAAGTAACATATATAATGTACGGACAACACCCATGTAGGAAAAAATGATAGATTGTTGTCTAAGGTGGCTAGGCCATGTGGGAAATAGACTATTACAATCCTTGGTAAGAAGATTGGATTGGAGGGTAGGCCATAAGAGTGTGAAGAGGGAGACCAAGAATAACTTAAATCTAGATATGCTTGCTGAGGATCTAGTCGATGACATAAAAATTTAATATCATTTAATTCATGTAGCTTTTCTATCTACTTGGGTTGGGAAAGGGTTTGATTGTGGTGACAGTGAGCTTACAAAAATCTTTGGATCTCCAAGAAACTCGACTTTTAAACTCGAACTCATTAGCATGTACATACTTGATTTTATATAAAAGATATGAATAACCAACCATTATTAATACCAAAATTTACAACTCTTAAACAATAAATAAAGAATGCTTTGTTTGGCACTTAAACTAATCTTTTGTTTTTGTATCTTGAAGAGTCTTACTAAATGACTTATTTGAAGGCTAGAGCTGTCTTATTGAATATTTTCTTGTCATTGACAGGTACTTGATAGCCTCACACACAACTGACTATGAGCATCCAATGCTGTTCTTCAACACGGTTGCCGTGATTGTGCTAGTTGTTGCGAAGTTCCCCAACATGCACAAGGTTAGGATATTCGGAATCAACGCTGATAAGTGA

Protein sequence

>MS.gene060527.t1

MANLYVKAVPPADLNRNTEWFTYPGVWTTYILILFFSWIMVLSVFGCSPGIAWTIVTYHFFHWKKGTPFADDQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVIVLVVAKFPNMHKVRIFGINADK