Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31689.t1 | XP_003588420.2 | 99 | 304 | 3 | 0 | 1 | 304 | 1 | 304 | 2.30E-161 | 578.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31689.t1 | Q96B26 | 35.2 | 284 | 168 | 4 | 21 | 302 | 5 | 274 | 5.2e-45 | 183.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31689.t1 | G7I253 | 99.0 | 304 | 3 | 0 | 1 | 304 | 1 | 304 | 1.6e-161 | 578.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051793 | MS.gene31689 | 0.82457 | 7.51E-54 | -1.69E-46 |
| MS.gene051828 | MS.gene31689 | 0.820458 | 6.79E-53 | -1.69E-46 |
| MS.gene051926 | MS.gene31689 | 0.80129 | 9.65E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene31689 | 0.818995 | 1.47E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051241 | MS.gene31689 | PPI |
| MS.gene051172 | MS.gene31689 | PPI |
| MS.gene31689 | MS.gene051245 | PPI |
| MS.gene055162 | MS.gene31689 | PPI |
| MS.gene23567 | MS.gene31689 | PPI |
| MS.gene25097 | MS.gene31689 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31689.t1 | MTR_1g007060 | 99.013 | 304 | 3 | 0 | 1 | 304 | 1 | 304 | 0.0 | 616 |
| MS.gene31689.t1 | MTR_1g007060 | 98.917 | 277 | 3 | 0 | 1 | 277 | 1 | 277 | 0.0 | 561 |
| MS.gene31689.t1 | MTR_1g063090 | 27.465 | 284 | 186 | 6 | 28 | 304 | 17 | 287 | 6.92e-30 | 115 |
| MS.gene31689.t1 | MTR_2g019210 | 26.978 | 278 | 184 | 6 | 28 | 302 | 17 | 278 | 2.19e-28 | 112 |
| MS.gene31689.t1 | MTR_2g019210 | 26.978 | 278 | 184 | 6 | 28 | 302 | 17 | 278 | 1.31e-27 | 111 |
| MS.gene31689.t1 | MTR_8g077430 | 28.966 | 290 | 175 | 5 | 29 | 304 | 11 | 283 | 1.36e-24 | 100 |
| MS.gene31689.t1 | MTR_1g031820 | 29.787 | 282 | 185 | 5 | 28 | 304 | 407 | 680 | 7.67e-24 | 102 |
| MS.gene31689.t1 | MTR_8g077430 | 27.074 | 229 | 136 | 5 | 90 | 304 | 3 | 214 | 5.77e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31689.t1 | AT1G60080 | 71.812 | 298 | 78 | 2 | 1 | 294 | 1 | 296 | 9.49e-149 | 419 |
| MS.gene31689.t1 | AT3G07750 | 28.929 | 280 | 186 | 5 | 28 | 302 | 9 | 280 | 9.60e-26 | 103 |
| MS.gene31689.t1 | AT3G07750 | 28.929 | 280 | 186 | 5 | 28 | 302 | 9 | 280 | 9.60e-26 | 103 |
| MS.gene31689.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 3.28e-22 | 95.9 |
| MS.gene31689.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 1.56e-21 | 94.4 |
| MS.gene31689.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 1.56e-21 | 94.4 |
| MS.gene31689.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 1.56e-21 | 94.4 |
| MS.gene31689.t1 | AT3G12990 | 26.236 | 263 | 176 | 6 | 28 | 286 | 17 | 265 | 5.40e-21 | 90.9 |
| MS.gene31689.t1 | AT3G12990 | 26.236 | 263 | 176 | 6 | 28 | 286 | 17 | 265 | 8.10e-21 | 90.9 |
| MS.gene31689.t1 | AT3G12990 | 26.236 | 263 | 176 | 6 | 28 | 286 | 17 | 265 | 8.10e-21 | 90.9 |
| MS.gene31689.t1 | AT3G12990 | 27.338 | 139 | 98 | 1 | 28 | 166 | 17 | 152 | 1.29e-14 | 72.0 |
Find 72 sgRNAs with CRISPR-Local
Find 461 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATTTGTTCTCCGATTGTT+AGG | 0.294873 | 1.1:-12302417 | MS.gene31689:CDS |
| TCTGCTTCAGCAGGCCTGCC+AGG | 0.301518 | 1.1:+12302394 | None:intergenic |
| GACAAAGGAGCAAGTCAATA+AGG | 0.312720 | 1.1:-12298203 | MS.gene31689:CDS |
| TGTCACATGGGTTTCCACTA+TGG | 0.313492 | 1.1:+12298084 | None:intergenic |
| AATGCAGGATATCTATTGTT+TGG | 0.323709 | 1.1:-12301638 | MS.gene31689:intron |
| TCACCAGACGAGGGTTGTTT+AGG | 0.343972 | 1.1:-12302564 | MS.gene31689:intron |
| GGTGCTGTTGCATCTGCTAA+TGG | 0.344645 | 1.1:-12302778 | MS.gene31689:CDS |
| TCCTCCGTTGCAGCAGCATT+TGG | 0.348161 | 1.1:+12304005 | None:intergenic |
| TATGTTGACTGCCATTAAAA+TGG | 0.360089 | 1.1:-12302610 | MS.gene31689:CDS |
| AGTATGCATGTTAATGATAA+TGG | 0.378572 | 1.1:+12298151 | None:intergenic |
| CGAAATATCGAAGCGGGAAA+AGG | 0.386567 | 1.1:+12303946 | None:intergenic |
| AACCCATGTGACAATCGTTC+TGG | 0.387086 | 1.1:-12298074 | MS.gene31689:CDS |
| AGCTGCATGGATGGCTTACT+TGG | 0.402269 | 1.1:-12301793 | MS.gene31689:intron |
| TGCCTATACTTCTGCTATCC+AGG | 0.404216 | 1.1:-12298002 | MS.gene31689:intron |
| CTCCGATTGTTAGGCCTGGC+AGG | 0.405390 | 1.1:-12302408 | MS.gene31689:CDS |
| GGAGGATTTGTCGTCTGAAA+TGG | 0.407849 | 1.1:-12303988 | MS.gene31689:CDS |
| CGGAGGCATATGGAAGTCTA+TGG | 0.408748 | 1.1:+12302438 | None:intergenic |
| GATTAAAACTTGCCTTGTAA+TGG | 0.411652 | 1.1:+12302342 | None:intergenic |
| CAGGCCTGCTGAAGCAGAGC+CGG | 0.424939 | 1.1:-12302389 | MS.gene31689:CDS |
| GGAAGTTATGACTCCTTCCT+TGG | 0.451336 | 1.1:-12302589 | MS.gene31689:CDS |
| GTGCTGTTGCATCTGCTAAT+GGG | 0.462693 | 1.1:-12302777 | MS.gene31689:CDS |
| GGGTCAGCTCTTGTGAAGAT+TGG | 0.474905 | 1.1:-12302757 | MS.gene31689:CDS |
| GGCCTGCCAGGCCTAACAAT+CGG | 0.478065 | 1.1:+12302406 | None:intergenic |
| GAGAACAAATCGGAGGCATA+TGG | 0.481259 | 1.1:+12302428 | None:intergenic |
| ATCTATTGTTTGGATGCTGA+CGG | 0.493395 | 1.1:-12301628 | MS.gene31689:CDS |
| GAACCTAAACAACCCTCGTC+TGG | 0.494261 | 1.1:+12302561 | None:intergenic |
| GCAGAAGTATAGGCAAGAAC+TGG | 0.495829 | 1.1:+12298010 | None:intergenic |
| TTCCTTGGAGTCACCAGACG+AGG | 0.497940 | 1.1:-12302574 | MS.gene31689:CDS |
| CTAATATCTCTTTACAAGCC+TGG | 0.503737 | 1.1:-12298037 | MS.gene31689:CDS |
| ACAATCGTTCTGGATACATC+TGG | 0.510136 | 1.1:-12298064 | MS.gene31689:CDS |
| ATGGATTCTTCTTCTGCAGT+AGG | 0.517127 | 1.1:+12298103 | None:intergenic |
| ACAACCGGCTCTGCTTCAGC+AGG | 0.520816 | 1.1:+12302385 | None:intergenic |
| GACAACTGCTTTGACACAAC+CGG | 0.523266 | 1.1:+12302370 | None:intergenic |
| TCTATTGTTTGGATGCTGAC+GGG | 0.526345 | 1.1:-12301627 | MS.gene31689:CDS |
| CTTCACTCTTTGCCTAGTCA+AGG | 0.527124 | 1.1:+12297272 | None:intergenic |
| CAAAGAAAATTCTGCTATGG+AGG | 0.528144 | 1.1:-12297229 | MS.gene31689:CDS |
| AGACAAAGAAAATTCTGCTA+TGG | 0.528919 | 1.1:-12297232 | MS.gene31689:CDS |
| TTGAGAGAGTTGTCCTTGGT+TGG | 0.529563 | 1.1:-12301822 | MS.gene31689:CDS |
| CTAACAATCGGAGAACAAAT+CGG | 0.530418 | 1.1:+12302418 | None:intergenic |
| GCTGAATCTATTCGTTCTGA+TGG | 0.531863 | 1.1:-12303912 | MS.gene31689:CDS |
| TGATTTGAGAGAGTTGTCCT+TGG | 0.533720 | 1.1:-12301826 | MS.gene31689:CDS |
| TAGGCAAGAACTGGCCCACC+AGG | 0.534699 | 1.1:+12298019 | None:intergenic |
| GTACTCATGTCTGATGAAGA+TGG | 0.534833 | 1.1:-12298235 | MS.gene31689:CDS |
| AGGACTGTGTTGCCTTGACT+AGG | 0.535125 | 1.1:-12297284 | MS.gene31689:CDS |
| GACGTTCGAAATATCGAAGC+GGG | 0.537454 | 1.1:+12303940 | None:intergenic |
| ACTTCACAAGAACTACATCT+TGG | 0.539032 | 1.1:-12298131 | MS.gene31689:CDS |
| TCCAAATGCTGCTGCAACGG+AGG | 0.548875 | 1.1:-12304006 | MS.gene31689:CDS |
| TCATCATTCATGGCTACAGC+AGG | 0.551700 | 1.1:+12298268 | None:intergenic |
| AACTTGCCTTGTAATGGTGT+CGG | 0.554769 | 1.1:+12302348 | None:intergenic |
| TGTTCTCCGATTGTTAGGCC+TGG | 0.555136 | 1.1:-12302412 | MS.gene31689:CDS |
| AGCAAGTCAATAAGGAGAAG+AGG | 0.555566 | 1.1:-12298195 | MS.gene31689:CDS |
| TACCTGGATAGCAGAAGTAT+AGG | 0.563807 | 1.1:+12298000 | None:intergenic |
| TGGTGGAAAAGCTGCATGGA+TGG | 0.577853 | 1.1:-12301802 | MS.gene31689:CDS |
| TGCAGAAGAAGAATCCATAG+TGG | 0.580538 | 1.1:-12298098 | MS.gene31689:CDS |
| AGAGAGTTGTCCTTGGTTGG+TGG | 0.580724 | 1.1:-12301819 | MS.gene31689:CDS |
| AGTTGTCCGACACCATTACA+AGG | 0.583544 | 1.1:-12302354 | MS.gene31689:intron |
| TCTTGTGAAGATTGGATCCA+CGG | 0.589881 | 1.1:-12302749 | MS.gene31689:intron |
| ATCCAGAACGATTGTCACAT+GGG | 0.589969 | 1.1:+12298072 | None:intergenic |
| ACCCTCGTCTGGTGACTCCA+AGG | 0.603409 | 1.1:+12302572 | None:intergenic |
| TCGTCTGGTGACTCCAAGGA+AGG | 0.603806 | 1.1:+12302576 | None:intergenic |
| TATCCAGAACGATTGTCACA+TGG | 0.603874 | 1.1:+12298071 | None:intergenic |
| CTTGACTAGGCAAAGAGTGA+AGG | 0.612342 | 1.1:-12297271 | MS.gene31689:CDS |
| TGTTCCAAATGCTGCTGCAA+CGG | 0.613285 | 1.1:-12304009 | MS.gene31689:CDS |
| TATCTCTTTACAAGCCTGGT+GGG | 0.624143 | 1.1:-12298033 | MS.gene31689:CDS |
| GTATCTCTAGCTTCTCTAAG+CGG | 0.649076 | 1.1:+12303885 | None:intergenic |
| TGGTTGGTGGAAAAGCTGCA+TGG | 0.657772 | 1.1:-12301806 | MS.gene31689:CDS |
| TCCTTGGAGTCACCAGACGA+GGG | 0.659573 | 1.1:-12302573 | MS.gene31689:CDS |
| AGATGGACAGAAGCAGACAA+AGG | 0.661694 | 1.1:-12298218 | MS.gene31689:CDS |
| ATATCTCTTTACAAGCCTGG+TGG | 0.666867 | 1.1:-12298034 | MS.gene31689:CDS |
| GCTGTAGCCATGAATGATGA+CGG | 0.675670 | 1.1:-12298265 | MS.gene31689:CDS |
| TGACGTTCGAAATATCGAAG+CGG | 0.723382 | 1.1:+12303939 | None:intergenic |
| ACAATCGGAGAACAAATCGG+AGG | 0.723892 | 1.1:+12302421 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATAACATTG+CGG | + | chr1.1:12299696-12299715 | None:intergenic | 10.0% |
| !! | AAGAAATTAAAATAAGATAT+AGG | + | chr1.1:12299369-12299388 | None:intergenic | 10.0% |
| !!! | AGCAAAATATTTTTTTTTAA+TGG | - | chr1.1:12299958-12299977 | MS.gene31689:intron | 10.0% |
| !!! | ATTATTATTATTTTTTTGAC+AGG | - | chr1.1:12299703-12299722 | MS.gene31689:intron | 10.0% |
| !!! | GCAAAATATTTTTTTTTAAT+GGG | - | chr1.1:12299959-12299978 | MS.gene31689:intron | 10.0% |
| !! | ATAACATATAACGAAATTTA+AGG | - | chr1.1:12299839-12299858 | MS.gene31689:intron | 15.0% |
| !! | TAAAACAACATAAGTAAAAA+AGG | + | chr1.1:12302783-12302802 | None:intergenic | 15.0% |
| !! | TAAGAGTTTATATTATAAGT+TGG | - | chr1.1:12297963-12297982 | MS.gene31689:intron | 15.0% |
| !! | TAATTCTATTACAAAAGTAA+AGG | + | chr1.1:12298167-12298186 | None:intergenic | 15.0% |
| !! | TTACAACTATGATTAAAATT+TGG | - | chr1.1:12302644-12302663 | MS.gene31689:intron | 15.0% |
| !! | TTATAACTGAAGATAAATAA+AGG | - | chr1.1:12297598-12297617 | MS.gene31689:intron | 15.0% |
| !!! | AAAGTTAAGTTTTTTCTTAT+AGG | + | chr1.1:12297910-12297929 | None:intergenic | 15.0% |
| !!! | CATTTGTTATTATGATATAT+TGG | - | chr1.1:12300332-12300351 | MS.gene31689:intron | 15.0% |
| !!! | TCTATCATATTTTGATATAT+TGG | - | chr1.1:12300204-12300223 | MS.gene31689:intron | 15.0% |
| !! | AAAAAGTTCCTTTAAATCTA+AGG | + | chr1.1:12299066-12299085 | None:intergenic | 20.0% |
| !! | AAAGAAGAATAATGAGAAAA+TGG | - | chr1.1:12302083-12302102 | MS.gene31689:intron | 20.0% |
| !! | ACATATATCATTAACATTCA+TGG | - | chr1.1:12303311-12303330 | MS.gene31689:intron | 20.0% |
| !! | ACTACAAACTAAATATAGTA+AGG | + | chr1.1:12303656-12303675 | None:intergenic | 20.0% |
| !! | TTTATCCAACATAATTGTTT+GGG | - | chr1.1:12302610-12302629 | MS.gene31689:CDS | 20.0% |
| !!! | AAGCTATTTTCATAATGTAT+TGG | - | chr1.1:12297507-12297526 | MS.gene31689:intron | 20.0% |
| !!! | ATGTTATAATTTTGGGTAAT+CGG | - | chr1.1:12299275-12299294 | MS.gene31689:intron | 20.0% |
| !!! | CTTTATGTTATCTTTTGTTA+TGG | - | chr1.1:12297926-12297945 | MS.gene31689:intron | 20.0% |
| !!! | TAAAATTTGGTTTTGTGTTA+TGG | - | chr1.1:12302657-12302676 | MS.gene31689:intron | 20.0% |
| !!! | TAAAGTTGATTTTGTTTTAC+TGG | - | chr1.1:12303888-12303907 | MS.gene31689:CDS | 20.0% |
| !!! | TAATTGTATTGATTTGGAAA+AGG | + | chr1.1:12301786-12301805 | None:intergenic | 20.0% |
| !!! | TTCTTACTTTTATTTTGTTG+CGG | + | chr1.1:12300277-12300296 | None:intergenic | 20.0% |
| !!! | TTGGTCTATGTTATAATTTT+GGG | - | chr1.1:12299268-12299287 | MS.gene31689:intron | 20.0% |
| ! | AAAAAACAAATAACTAACCG+TGG | + | chr1.1:12298506-12298525 | None:intergenic | 25.0% |
| ! | AAACTAACCAAGAAAAATAC+TGG | + | chr1.1:12297375-12297394 | None:intergenic | 25.0% |
| ! | AAAGGAACAATTACAATTGA+TGG | + | chr1.1:12301768-12301787 | None:intergenic | 25.0% |
| ! | AATCGTGAATAACATACTAA+AGG | + | chr1.1:12298392-12298411 | None:intergenic | 25.0% |
| ! | ACAAACTAAATATAGTAAGG+TGG | + | chr1.1:12303653-12303672 | None:intergenic | 25.0% |
| ! | ACTTAAGGAAACTCAAATTT+AGG | + | chr1.1:12302742-12302761 | None:intergenic | 25.0% |
| ! | AGCTTAATATATAGCTCTTT+AGG | + | chr1.1:12301928-12301947 | None:intergenic | 25.0% |
| ! | AGTATGCATGTTAATGATAA+TGG | + | chr1.1:12303087-12303106 | None:intergenic | 25.0% |
| ! | ATAGATAGTTTAAATTCGAC+TGG | + | chr1.1:12299338-12299357 | None:intergenic | 25.0% |
| ! | ATGGAAAAGAGGAAAATAAA+GGG | - | chr1.1:12299022-12299041 | MS.gene31689:intron | 25.0% |
| ! | ATGGAACTAGCATTATATAA+GGG | - | chr1.1:12301598-12301617 | MS.gene31689:CDS | 25.0% |
| ! | ATTAATACAAAAGATCTCAG+AGG | - | chr1.1:12303522-12303541 | MS.gene31689:intron | 25.0% |
| ! | ATTATTGAATGACATAATGC+AGG | - | chr1.1:12299582-12299601 | MS.gene31689:intron | 25.0% |
| ! | ATTCACATTAACGATATCAA+TGG | + | chr1.1:12302865-12302884 | None:intergenic | 25.0% |
| ! | GCAATAATGAATTCATCAAA+GGG | + | chr1.1:12302016-12302035 | None:intergenic | 25.0% |
| ! | GTTTATCCAACATAATTGTT+TGG | - | chr1.1:12302609-12302628 | MS.gene31689:CDS | 25.0% |
| ! | GTTTGTATGTAATACAATGA+AGG | - | chr1.1:12303785-12303804 | MS.gene31689:intron | 25.0% |
| ! | TACATAGGTCAAAATCAATA+CGG | + | chr1.1:12302922-12302941 | None:intergenic | 25.0% |
| ! | TACTTCTATATGTGAATATC+AGG | - | chr1.1:12303601-12303620 | MS.gene31689:intron | 25.0% |
| ! | TATAGAAGTAAGCTTGAATA+TGG | + | chr1.1:12303591-12303610 | None:intergenic | 25.0% |
| ! | TATATGTGAATATCAGGATT+TGG | - | chr1.1:12303607-12303626 | MS.gene31689:intron | 25.0% |
| ! | TATGTTAATTACGATTGTTG+TGG | - | chr1.1:12303924-12303943 | MS.gene31689:CDS | 25.0% |
| ! | TCAAATAAGTAAATCCAAAC+AGG | + | chr1.1:12297758-12297777 | None:intergenic | 25.0% |
| ! | TTACAATGTCATTAAGTGAT+AGG | - | chr1.1:12300062-12300081 | MS.gene31689:intron | 25.0% |
| ! | TTAGTATGTTATTCACGATT+GGG | - | chr1.1:12298392-12298411 | MS.gene31689:intron | 25.0% |
| ! | TTTAGTATGTTATTCACGAT+TGG | - | chr1.1:12298391-12298410 | MS.gene31689:intron | 25.0% |
| !! | AAGTAATACAAAGAGCTTTT+CGG | - | chr1.1:12300388-12300407 | MS.gene31689:intron | 25.0% |
| !! | ACGATTTTTGTGATGAATTA+TGG | - | chr1.1:12303460-12303479 | MS.gene31689:intron | 25.0% |
| !! | AGTCATAACTTCCATTTTAA+TGG | + | chr1.1:12298639-12298658 | None:intergenic | 25.0% |
| !! | ATATTTTCCTCTCAAATTCA+AGG | - | chr1.1:12300569-12300588 | MS.gene31689:intron | 25.0% |
| !! | ATGTTGACTATGATATGATA+TGG | + | chr1.1:12303295-12303314 | None:intergenic | 25.0% |
| !! | ATTGACTTAATTGAGCTTAT+GGG | - | chr1.1:12297732-12297751 | MS.gene31689:intron | 25.0% |
| !! | ATTGATAACTACACATTCAA+AGG | + | chr1.1:12299564-12299583 | None:intergenic | 25.0% |
| !! | GAAATTTTCCACAAATTAGT+AGG | + | chr1.1:12302494-12302513 | None:intergenic | 25.0% |
| !! | TAGACAAATACATTCTAGTT+GGG | - | chr1.1:12299867-12299886 | MS.gene31689:intron | 25.0% |
| !! | TTGAGTTTCCTTAAGTATTT+TGG | - | chr1.1:12302746-12302765 | MS.gene31689:intron | 25.0% |
| !! | TTTGTTATCTTTGTTTCGTT+TGG | - | chr1.1:12297434-12297453 | MS.gene31689:intron | 25.0% |
| !!! | AAATTGTTTTTGAGAGCTTA+TGG | - | chr1.1:12298043-12298062 | MS.gene31689:CDS | 25.0% |
| !!! | AATTTTAAAACCAGTAGAAG+TGG | + | chr1.1:12299192-12299211 | None:intergenic | 25.0% |
| !!! | AGTTATATTCTTCTAGGATT+CGG | + | chr1.1:12301866-12301885 | None:intergenic | 25.0% |
| !!! | ATTTTAAAACCAGTAGAAGT+GGG | + | chr1.1:12299191-12299210 | None:intergenic | 25.0% |
| !!! | CTCTAGATTCTTACTTTTAT+TGG | + | chr1.1:12300097-12300116 | None:intergenic | 25.0% |
| !!! | CTTTTATTTTACCAGTTCAT+AGG | + | chr1.1:12298015-12298034 | None:intergenic | 25.0% |
| !!! | GAACTGTAATTGTATTGATT+TGG | + | chr1.1:12301792-12301811 | None:intergenic | 25.0% |
| !!! | GACTACAAACTCTTTTTTAA+AGG | + | chr1.1:12303490-12303509 | None:intergenic | 25.0% |
| !!! | GTTCATATAAGTTGTTTTCA+AGG | - | chr1.1:12297699-12297718 | MS.gene31689:intron | 25.0% |
| !!! | GTTGGTCTATGTTATAATTT+TGG | - | chr1.1:12299267-12299286 | MS.gene31689:intron | 25.0% |
| !!! | TAATTTCTTTTTTCCAGTTC+TGG | - | chr1.1:12299380-12299399 | MS.gene31689:intron | 25.0% |
| !!! | TGGAGTTTTTTAGTTGTTTT+TGG | - | chr1.1:12302690-12302709 | MS.gene31689:intron | 25.0% |
| !!! | TTATGATATATTGGCTTGAA+TGG | - | chr1.1:12300341-12300360 | MS.gene31689:intron | 25.0% |
| !!! | TTGCTTTTACCACAATAAAA+GGG | - | chr1.1:12298992-12299011 | MS.gene31689:intron | 25.0% |
| AAAACGTAAGAAAGACATGA+AGG | - | chr1.1:12301533-12301552 | MS.gene31689:intron | 30.0% | |
| AAAAGTAAGAATCTAGAGAG+AGG | - | chr1.1:12300099-12300118 | MS.gene31689:intron | 30.0% | |
| AAACAATGACAGTTCACATT+TGG | - | chr1.1:12301430-12301449 | MS.gene31689:intron | 30.0% | |
| AAACACAAGTACACAACAAA+AGG | + | chr1.1:12302593-12302612 | None:intergenic | 30.0% | |
| AAACACAGCCAAAATACTTA+AGG | + | chr1.1:12302757-12302776 | None:intergenic | 30.0% | |
| AAACGTAAGAAAGACATGAA+GGG | - | chr1.1:12301534-12301553 | MS.gene31689:intron | 30.0% | |
| AAAGTAAGAATCTAGAGAGA+GGG | - | chr1.1:12300100-12300119 | MS.gene31689:intron | 30.0% | |
| AAATCAATACGGTAATACGA+CGG | + | chr1.1:12302911-12302930 | None:intergenic | 30.0% | |
| AACAATGACAGTTCACATTT+GGG | - | chr1.1:12301431-12301450 | MS.gene31689:intron | 30.0% | |
| AACTAAAACGTGAGTGTTTA+GGG | + | chr1.1:12302432-12302451 | None:intergenic | 30.0% | |
| AAGAGAGTTGTGTTCTTTAA+CGG | + | chr1.1:12301243-12301262 | None:intergenic | 30.0% | |
| AATGAGATCATCAGTTAAAG+AGG | - | chr1.1:12301369-12301388 | MS.gene31689:intron | 30.0% | |
| AATGCAGGATATCTATTGTT+TGG | - | chr1.1:12299597-12299616 | MS.gene31689:intron | 30.0% | |
| ACTTATTTAAGCATGTCTAC+TGG | + | chr1.1:12298345-12298364 | None:intergenic | 30.0% | |
| AGACAAAGAAAATTCTGCTA+TGG | - | chr1.1:12304003-12304022 | MS.gene31689:CDS | 30.0% | |
| AGAGCTTATGAAATGTCTAT+TGG | + | chr1.1:12298296-12298315 | None:intergenic | 30.0% | |
| AGTATTGTAGCATATTAAGC+AGG | - | chr1.1:12300539-12300558 | MS.gene31689:intron | 30.0% | |
| AGTGCTTTATATGCAAGAAT+AGG | + | chr1.1:12299780-12299799 | None:intergenic | 30.0% | |
| ATATTATCACCTAACAGAAG+TGG | - | chr1.1:12300795-12300814 | MS.gene31689:intron | 30.0% | |
| ATGAAAAAGTAAGTTCACAG+TGG | - | chr1.1:12303749-12303768 | MS.gene31689:intron | 30.0% | |
| ATGAATACAAAAGATCTCAG+AGG | - | chr1.1:12303421-12303440 | MS.gene31689:intron | 30.0% | |
| CAAATCCCAAACAATTATGT+TGG | + | chr1.1:12302618-12302637 | None:intergenic | 30.0% | |
| CAATACTATATTCCATCACA+TGG | + | chr1.1:12300526-12300545 | None:intergenic | 30.0% | |
| CATAGAAACAATGCATTGTA+TGG | - | chr1.1:12299515-12299534 | MS.gene31689:intron | 30.0% | |
| CATGGAACTAGCATTATATA+AGG | - | chr1.1:12301597-12301616 | MS.gene31689:CDS | 30.0% | |
| CTAAATAATCAACACACAAG+TGG | + | chr1.1:12298719-12298738 | None:intergenic | 30.0% | |
| CTAGACAAATACATTCTAGT+TGG | - | chr1.1:12299866-12299885 | MS.gene31689:intron | 30.0% | |
| CTCAACTGATCAGTAAAATT+GGG | - | chr1.1:12299310-12299329 | MS.gene31689:intron | 30.0% | |
| GAAGGACATTATATTTGTGT+TGG | - | chr1.1:12299249-12299268 | MS.gene31689:intron | 30.0% | |
| GACTGAATATAATAACACTG+AGG | + | chr1.1:12299732-12299751 | None:intergenic | 30.0% | |
| GATGGAAAAGAGGAAAATAA+AGG | - | chr1.1:12299021-12299040 | MS.gene31689:intron | 30.0% | |
| GATTAAAACTTGCCTTGTAA+TGG | + | chr1.1:12298896-12298915 | None:intergenic | 30.0% | |
| GGCAATAATGAATTCATCAA+AGG | + | chr1.1:12302017-12302036 | None:intergenic | 30.0% | |
| GTCATAAACAATCCATAAGT+GGG | + | chr1.1:12299819-12299838 | None:intergenic | 30.0% | |
| GTGAAGATTACAGAAACATT+TGG | - | chr1.1:12300633-12300652 | MS.gene31689:intron | 30.0% | |
| GTGTACAGTCAAGAAAATAT+TGG | + | chr1.1:12303692-12303711 | None:intergenic | 30.0% | |
| GTTTAGGTCCTTAGATTTAA+AGG | - | chr1.1:12299055-12299074 | MS.gene31689:intron | 30.0% | |
| TAAAAGTTCAAACACGTAGT+GGG | + | chr1.1:12299131-12299150 | None:intergenic | 30.0% | |
| TAATCTTCACACTAAACTCA+GGG | + | chr1.1:12300623-12300642 | None:intergenic | 30.0% | |
| TGGAAAAGAGGAAAATAAAG+GGG | - | chr1.1:12299023-12299042 | MS.gene31689:intron | 30.0% | |
| TGGAACTAGCATTATATAAG+GGG | - | chr1.1:12301599-12301618 | MS.gene31689:CDS | 30.0% | |
| TGGACATAAAATAATGCATG+TGG | + | chr1.1:12302825-12302844 | None:intergenic | 30.0% | |
| TGTCATAAACAATCCATAAG+TGG | + | chr1.1:12299820-12299839 | None:intergenic | 30.0% | |
| TTAAAAGTTCAAACACGTAG+TGG | + | chr1.1:12299132-12299151 | None:intergenic | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr1.1:12297989-12298008 | MS.gene31689:intron | 30.0% | |
| TTAATGGGATATACTTAGCA+TGG | - | chr1.1:12299974-12299993 | MS.gene31689:intron | 30.0% | |
| TTATCCAAACAAGTATCCTT+GGG | - | chr1.1:12298244-12298263 | MS.gene31689:CDS | 30.0% | |
| TTGACAGTTATCTACGTAAA+TGG | - | chr1.1:12303849-12303868 | MS.gene31689:intron | 30.0% | |
| TTTAAGCTGTTTATCCAAAC+AGG | - | chr1.1:12297988-12298007 | MS.gene31689:intron | 30.0% | |
| TTTATCCAAACAAGTATCCT+TGG | - | chr1.1:12298243-12298262 | MS.gene31689:CDS | 30.0% | |
| TTTCTTCTTTGTATCATCTG+TGG | + | chr1.1:12300244-12300263 | None:intergenic | 30.0% | |
| ! | AAAATCGTTGAAAGCTTTGA+AGG | + | chr1.1:12303448-12303467 | None:intergenic | 30.0% |
| ! | AACATTCATGGTCTCATTTT+GGG | - | chr1.1:12303323-12303342 | MS.gene31689:intron | 30.0% |
| ! | AGACAAATACATTCTAGTTG+GGG | - | chr1.1:12299868-12299887 | MS.gene31689:intron | 30.0% |
| ! | AGAGATACCAGTATTTTTCT+TGG | - | chr1.1:12297365-12297384 | MS.gene31689:intron | 30.0% |
| ! | CTTTTATTGTGGTAAAAGCA+AGG | + | chr1.1:12298993-12299012 | None:intergenic | 30.0% |
| ! | GAAAATAAAGGGGAGTTTTT+AGG | - | chr1.1:12299033-12299052 | MS.gene31689:intron | 30.0% |
| ! | GATTGACTTAATTGAGCTTA+TGG | - | chr1.1:12297731-12297750 | MS.gene31689:intron | 30.0% |
| ! | GATTTTATGAAAACAGCTCA+TGG | - | chr1.1:12297813-12297832 | MS.gene31689:intron | 30.0% |
| ! | TAACATTCATGGTCTCATTT+TGG | - | chr1.1:12303322-12303341 | MS.gene31689:intron | 30.0% |
| ! | TATGTTGACTGCCATTAAAA+TGG | - | chr1.1:12298625-12298644 | MS.gene31689:intron | 30.0% |
| ! | TCTCTTTTGTCCGTTAAAAA+AGG | - | chr1.1:12301257-12301276 | MS.gene31689:intron | 30.0% |
| ! | TCTTGCTTTGAATATCAACT+GGG | + | chr1.1:12303568-12303587 | None:intergenic | 30.0% |
| ! | TGCTTTTACCACAATAAAAG+GGG | - | chr1.1:12298993-12299012 | MS.gene31689:intron | 30.0% |
| ! | TTCTTTCTGTTCTTTTCTCA+AGG | + | chr1.1:12300300-12300319 | None:intergenic | 30.0% |
| ! | TTGTTAAGTATGCCATTTCT+GGG | - | chr1.1:12302044-12302063 | MS.gene31689:intron | 30.0% |
| ! | TTTAGTTGTGCTGACATATT+GGG | - | chr1.1:12298740-12298759 | MS.gene31689:intron | 30.0% |
| ! | TTTTGTCCGTTAAAAAAGGA+TGG | - | chr1.1:12301261-12301280 | MS.gene31689:intron | 30.0% |
| !! | ATCTTTCATGTTGCTTTGTT+AGG | - | chr1.1:12298913-12298932 | MS.gene31689:intron | 30.0% |
| !! | CTTGCTTTTACCACAATAAA+AGG | - | chr1.1:12298991-12299010 | MS.gene31689:intron | 30.0% |
| !! | GCTGTTTTCATATACTATCA+TGG | + | chr1.1:12298113-12298132 | None:intergenic | 30.0% |
| !! | TACTTTAAGTGTGTCATTTG+TGG | + | chr1.1:12300373-12300392 | None:intergenic | 30.0% |
| !! | TGTGTTATGGATTTGCTATT+TGG | - | chr1.1:12302670-12302689 | MS.gene31689:intron | 30.0% |
| !! | TTTTAGTTGTGCTGACATAT+TGG | - | chr1.1:12298739-12298758 | MS.gene31689:intron | 30.0% |
| !!! | TTTTAAAACCAGTAGAAGTG+GGG | + | chr1.1:12299190-12299209 | None:intergenic | 30.0% |
| AAAAGTTCAAACACGTAGTG+GGG | + | chr1.1:12299130-12299149 | None:intergenic | 35.0% | |
| AAACCTTGTTACAAAGCACA+TGG | + | chr1.1:12300764-12300783 | None:intergenic | 35.0% | |
| AAATGCCCTTTCTGTTATTC+CGG | - | chr1.1:12300427-12300446 | MS.gene31689:intron | 35.0% | |
| AAGTAAGAATCTAGAGAGAG+GGG | - | chr1.1:12300101-12300120 | MS.gene31689:intron | 35.0% | |
| AATAGAACTTTGCCCACTTA+TGG | - | chr1.1:12299804-12299823 | MS.gene31689:intron | 35.0% | |
| AATCAATACGGTAATACGAC+GGG | + | chr1.1:12302910-12302929 | None:intergenic | 35.0% | |
| AATTCACATTACGTGCATTG+TGG | - | chr1.1:12301668-12301687 | MS.gene31689:intron | 35.0% | |
| ACATTGCAACGGAATTAAAG+AGG | - | chr1.1:12303265-12303284 | MS.gene31689:intron | 35.0% | |
| ACTCATTCACTTAAACTAGC+AGG | + | chr1.1:12300485-12300504 | None:intergenic | 35.0% | |
| ACTCTTTGCCTTGAAATTGT+TGG | + | chr1.1:12301335-12301354 | None:intergenic | 35.0% | |
| ACTTCACAAGAACTACATCT+TGG | - | chr1.1:12303104-12303123 | MS.gene31689:intron | 35.0% | |
| AGAAATGCTGATGAGCAATT+GGG | - | chr1.1:12301465-12301484 | MS.gene31689:intron | 35.0% | |
| AGAGAGTTGTGTTCTTTAAC+GGG | + | chr1.1:12301242-12301261 | None:intergenic | 35.0% | |
| AGGTTGTTTAGTGTTCTGAT+AGG | - | chr1.1:12300153-12300172 | MS.gene31689:intron | 35.0% | |
| AGTTGTAATTAAGCCTGCAA+TGG | - | chr1.1:12302448-12302467 | MS.gene31689:intron | 35.0% | |
| ATAATGTCCTTCAAAGCAGT+AGG | + | chr1.1:12299241-12299260 | None:intergenic | 35.0% | |
| ATACAGTTGCTGAAATCATC+TGG | + | chr1.1:12300847-12300866 | None:intergenic | 35.0% | |
| ATCTATTGTTTGGATGCTGA+CGG | - | chr1.1:12299607-12299626 | MS.gene31689:intron | 35.0% | |
| ATGAGTGATAAGTGTCCTTT+AGG | - | chr1.1:12301045-12301064 | MS.gene31689:intron | 35.0% | |
| ATTACGATTGTTGTGGTTTC+AGG | - | chr1.1:12303931-12303950 | MS.gene31689:CDS | 35.0% | |
| ATTCACATTACGTGCATTGT+GGG | - | chr1.1:12301669-12301688 | MS.gene31689:intron | 35.0% | |
| CAAACATATAACACGAGCAA+AGG | - | chr1.1:12300930-12300949 | MS.gene31689:intron | 35.0% | |
| CAAAGAAAATTCTGCTATGG+AGG | - | chr1.1:12304006-12304025 | MS.gene31689:CDS | 35.0% | |
| CAAATCAATCATTCCAGAAC+TGG | + | chr1.1:12299396-12299415 | None:intergenic | 35.0% | |
| CAACTAAAACGTGAGTGTTT+AGG | + | chr1.1:12302433-12302452 | None:intergenic | 35.0% | |
| CAATGTCATTAAGTGATAGG+AGG | - | chr1.1:12300065-12300084 | MS.gene31689:intron | 35.0% | |
| CAATTCAGAAAAGCAACACT+AGG | + | chr1.1:12299938-12299957 | None:intergenic | 35.0% | |
| CACAAATTAGTAGGCATAGT+GGG | + | chr1.1:12302485-12302504 | None:intergenic | 35.0% | |
| CCATGAACAGAAACAGAAAT+CGG | - | chr1.1:12302315-12302334 | MS.gene31689:intron | 35.0% | |
| CTAACAATCGGAGAACAAAT+CGG | + | chr1.1:12298820-12298839 | None:intergenic | 35.0% | |
| CTAATATCTCTTTACAAGCC+TGG | - | chr1.1:12303198-12303217 | MS.gene31689:intron | 35.0% | |
| CTAGCAACCAATAGACATTT+GGG | - | chr1.1:12300904-12300923 | MS.gene31689:intron | 35.0% | |
| CTATGATAAGCGATTATCCT+AGG | - | chr1.1:12298205-12298224 | MS.gene31689:CDS | 35.0% | |
| CTCTTTGCCTTGAAATTGTT+GGG | + | chr1.1:12301334-12301353 | None:intergenic | 35.0% | |
| CTTATTTACACAAACTCCCA+AGG | + | chr1.1:12298263-12298282 | None:intergenic | 35.0% | |
| CTTGAACGTTTCAACCATAT+GGG | - | chr1.1:12301201-12301220 | MS.gene31689:intron | 35.0% | |
| CTTGGGAGTTTGTGTAAATA+AGG | - | chr1.1:12298261-12298280 | MS.gene31689:CDS | 35.0% | |
| GAGAGCTTATAGAGATATGT+TGG | + | chr1.1:12298091-12298110 | None:intergenic | 35.0% | |
| GAGCTTATGGAAACAACTTA+TGG | - | chr1.1:12298056-12298075 | MS.gene31689:CDS | 35.0% | |
| GATCTGAGTTCATTCTTTGT+TGG | + | chr1.1:12300742-12300761 | None:intergenic | 35.0% | |
| GCAAGAATATGACACAATTG+CGG | - | chr1.1:12300695-12300714 | MS.gene31689:intron | 35.0% | |
| GCATGTACGACTTTATGTTA+TGG | - | chr1.1:12302712-12302731 | MS.gene31689:intron | 35.0% | |
| GCTCAACTGATCAGTAAAAT+TGG | - | chr1.1:12299309-12299328 | MS.gene31689:intron | 35.0% | |
| GCTTATAGAGATATGTTGGA+AGG | + | chr1.1:12298087-12298106 | None:intergenic | 35.0% | |
| GGAACTAGCATTATATAAGG+GGG | - | chr1.1:12301600-12301619 | MS.gene31689:CDS | 35.0% | |
| GGAATACTATTTCAGTTCTG+AGG | + | chr1.1:12301302-12301321 | None:intergenic | 35.0% | |
| GGCAAAATGGAAATGTACAT+AGG | + | chr1.1:12302937-12302956 | None:intergenic | 35.0% | |
| GGCAAAGAGTGAATTAAACT+TGG | - | chr1.1:12301345-12301364 | MS.gene31689:intron | 35.0% | |
| GGCATACTTAACAACTCAAT+GGG | + | chr1.1:12302038-12302057 | None:intergenic | 35.0% | |
| GTAATCTTCACACTAAACTC+AGG | + | chr1.1:12300624-12300643 | None:intergenic | 35.0% | |
| GTCAATTCTTCATTGCCTAA+AGG | + | chr1.1:12301063-12301082 | None:intergenic | 35.0% | |
| GTGATAGACTGTATATGTGA+AGG | - | chr1.1:12300133-12300152 | MS.gene31689:intron | 35.0% | |
| GTTATTCACGATTGGGAATT+CGG | - | chr1.1:12298399-12298418 | MS.gene31689:intron | 35.0% | |
| TAAAAAAGGATGGAGCCATT+TGG | - | chr1.1:12301271-12301290 | MS.gene31689:intron | 35.0% | |
| TAAAATTCTTCCTGTTCCTG+TGG | - | chr1.1:12299205-12299224 | MS.gene31689:intron | 35.0% | |
| TAGAAATGCTGATGAGCAAT+TGG | - | chr1.1:12301464-12301483 | MS.gene31689:intron | 35.0% | |
| TATGATAGAACCAAACCAAC+TGG | + | chr1.1:12300193-12300212 | None:intergenic | 35.0% | |
| TCTATGACCTTGAATTTGAG+AGG | + | chr1.1:12300579-12300598 | None:intergenic | 35.0% | |
| TCTATTCTGCGTTTGCATTT+GGG | - | chr1.1:12298537-12298556 | MS.gene31689:intron | 35.0% | |
| TGATGCTACTGACAAATTTC+TGG | + | chr1.1:12301957-12301976 | None:intergenic | 35.0% | |
| TGGAGAGTGATTTATGATGA+TGG | - | chr1.1:12301003-12301022 | MS.gene31689:intron | 35.0% | |
| TGGCAATACATAAACTCTCT+TGG | + | chr1.1:12302845-12302864 | None:intergenic | 35.0% | |
| TGGCATACTTAACAACTCAA+TGG | + | chr1.1:12302039-12302058 | None:intergenic | 35.0% | |
| TTATTCACGATTGGGAATTC+GGG | - | chr1.1:12298400-12298419 | MS.gene31689:intron | 35.0% | |
| TTATTGTTAGCCAGTTGGTT+TGG | - | chr1.1:12300180-12300199 | MS.gene31689:intron | 35.0% | |
| TTGCTCGTGTTATATGTTTG+AGG | + | chr1.1:12300930-12300949 | None:intergenic | 35.0% | |
| ! | AATTCGGGAGTATACTAAAG+TGG | - | chr1.1:12298415-12298434 | MS.gene31689:intron | 35.0% |
| ! | GTCTTGCTTTGAATATCAAC+TGG | + | chr1.1:12303569-12303588 | None:intergenic | 35.0% |
| ! | GTTGTTAAGTATGCCATTTC+TGG | - | chr1.1:12302043-12302062 | MS.gene31689:intron | 35.0% |
| ! | TATTTTGCCGTCATCATTCA+TGG | + | chr1.1:12302980-12302999 | None:intergenic | 35.0% |
| ! | TGCAGCAAATTCCTTTTTAC+CGG | + | chr1.1:12302140-12302159 | None:intergenic | 35.0% |
| !! | ATTTCTGTTTCTGTTCATGG+CGG | + | chr1.1:12302315-12302334 | None:intergenic | 35.0% |
| !!! | AAAGGGGAGTTTTTAGGTTT+AGG | - | chr1.1:12299039-12299058 | MS.gene31689:intron | 35.0% |
| !!! | ATGGCTCCATCCTTTTTTAA+CGG | + | chr1.1:12301270-12301289 | None:intergenic | 35.0% |
| !!! | GGCTGTTTCTCTTTTTGATT+AGG | - | chr1.1:12298436-12298455 | MS.gene31689:intron | 35.0% |
| AACTCCCAAGGATACTTGTT+TGG | + | chr1.1:12298251-12298270 | None:intergenic | 40.0% | |
| AACTTGCCTTGTAATGGTGT+CGG | + | chr1.1:12298890-12298909 | None:intergenic | 40.0% | |
| AAGTGGAGCAGAAATTTCCT+TGG | - | chr1.1:12300812-12300831 | MS.gene31689:intron | 40.0% | |
| ACAATAAAAGGGGACTTGGA+TGG | - | chr1.1:12299003-12299022 | MS.gene31689:intron | 40.0% | |
| ACAGAAACATTTGGCAGAGA+GGG | - | chr1.1:12300642-12300661 | MS.gene31689:intron | 40.0% | |
| AGCAAGTCAATAAGGAGAAG+AGG | - | chr1.1:12303040-12303059 | MS.gene31689:intron | 40.0% | |
| AGTCCATGTTGCAGAAAACA+TGG | - | chr1.1:12300983-12301002 | MS.gene31689:intron | 40.0% | |
| ATAGTAGAGAGACCATGTGA+TGG | - | chr1.1:12300511-12300530 | MS.gene31689:intron | 40.0% | |
| ATATCTCTTTACAAGCCTGG+TGG | - | chr1.1:12303201-12303220 | MS.gene31689:intron | 40.0% | |
| ATCCAGAACGATTGTCACAT+GGG | + | chr1.1:12303166-12303185 | None:intergenic | 40.0% | |
| ATGCTGCAAAGTTCCAACAA+TGG | - | chr1.1:12301127-12301146 | MS.gene31689:intron | 40.0% | |
| ATGGATTCTTCTTCTGCAGT+AGG | + | chr1.1:12303135-12303154 | None:intergenic | 40.0% | |
| ATTTCCAGTTTCCACCCATA+TGG | + | chr1.1:12301218-12301237 | None:intergenic | 40.0% | |
| ATTTCTGCTCCACTTCTGTT+AGG | + | chr1.1:12300807-12300826 | None:intergenic | 40.0% | |
| CAAAAGGTTGCACAAGATGA+TGG | + | chr1.1:12302577-12302596 | None:intergenic | 40.0% | |
| CACTTTGGTAGAGTTCAAAG+AGG | + | chr1.1:12299106-12299125 | None:intergenic | 40.0% | |
| CATTCACTTAAACTAGCAGG+TGG | + | chr1.1:12300482-12300501 | None:intergenic | 40.0% | |
| CCACAAATTAGTAGGCATAG+TGG | + | chr1.1:12302486-12302505 | None:intergenic | 40.0% | |
| CCACTATGCCTACTAATTTG+TGG | - | chr1.1:12302483-12302502 | MS.gene31689:intron | 40.0% | |
| CCTAGCAACCAATAGACATT+TGG | - | chr1.1:12300903-12300922 | MS.gene31689:intron | 40.0% | |
| GAACAGAAACAGAAATCGGT+GGG | - | chr1.1:12302319-12302338 | MS.gene31689:intron | 40.0% | |
| GACAAAGGAGCAAGTCAATA+AGG | - | chr1.1:12303032-12303051 | MS.gene31689:intron | 40.0% | |
| GAGAGTTGTGTTCTTTAACG+GGG | + | chr1.1:12301241-12301260 | None:intergenic | 40.0% | |
| GAGTTCATTCTTTGTTGGAG+AGG | + | chr1.1:12300737-12300756 | None:intergenic | 40.0% | |
| GATCCATGTGCTTTGTAACA+AGG | - | chr1.1:12300758-12300777 | MS.gene31689:intron | 40.0% | |
| GCATGCGATTTAAACTTCCA+TGG | + | chr1.1:12302243-12302262 | None:intergenic | 40.0% | |
| GCTGAATCTATTCGTTCTGA+TGG | - | chr1.1:12297323-12297342 | MS.gene31689:intron | 40.0% | |
| GCTTGAACGTTTCAACCATA+TGG | - | chr1.1:12301200-12301219 | MS.gene31689:intron | 40.0% | |
| GGGCTCAGTTATATTCTTCT+AGG | + | chr1.1:12301872-12301891 | None:intergenic | 40.0% | |
| GGTAAGCTTACACATTGCAA+CGG | - | chr1.1:12303254-12303273 | MS.gene31689:intron | 40.0% | |
| GGTCATAGAGTAACCTAAAG+AGG | - | chr1.1:12300590-12300609 | MS.gene31689:intron | 40.0% | |
| GGTTGAATAATAGCACAGCA+TGG | + | chr1.1:12300873-12300892 | None:intergenic | 40.0% | |
| GTACTCATGTCTGATGAAGA+TGG | - | chr1.1:12303000-12303019 | MS.gene31689:intron | 40.0% | |
| GTCTATTCTGCGTTTGCATT+TGG | - | chr1.1:12298536-12298555 | MS.gene31689:intron | 40.0% | |
| GTCTGTTATTGTTAGCCAGT+TGG | - | chr1.1:12300175-12300194 | MS.gene31689:intron | 40.0% | |
| TAAACTTCCATGGTATCCAC+AGG | + | chr1.1:12302233-12302252 | None:intergenic | 40.0% | |
| TACAGAAACATTTGGCAGAG+AGG | - | chr1.1:12300641-12300660 | MS.gene31689:intron | 40.0% | |
| TACCACAATAAAAGGGGACT+TGG | - | chr1.1:12298999-12299018 | MS.gene31689:intron | 40.0% | |
| TATCCAGAACGATTGTCACA+TGG | + | chr1.1:12303167-12303186 | None:intergenic | 40.0% | |
| TATCTCTTTACAAGCCTGGT+GGG | - | chr1.1:12303202-12303221 | MS.gene31689:intron | 40.0% | |
| TCTATTGTTTGGATGCTGAC+GGG | - | chr1.1:12299608-12299627 | MS.gene31689:intron | 40.0% | |
| TCTTGTGAAGATTGGATCCA+CGG | - | chr1.1:12298486-12298505 | MS.gene31689:intron | 40.0% | |
| TGAACAGAAACAGAAATCGG+TGG | - | chr1.1:12302318-12302337 | MS.gene31689:intron | 40.0% | |
| TGACGTTCGAAATATCGAAG+CGG | + | chr1.1:12297299-12297318 | None:intergenic | 40.0% | |
| TGATTTGAGAGAGTTGTCCT+TGG | - | chr1.1:12299409-12299428 | MS.gene31689:intron | 40.0% | |
| TGCAGAAGAAGAATCCATAG+TGG | - | chr1.1:12303137-12303156 | MS.gene31689:intron | 40.0% | |
| TGGAAGTTTAAATCGCATGC+AGG | - | chr1.1:12302243-12302262 | MS.gene31689:intron | 40.0% | |
| TTCAGAAAAGCAACACTAGG+AGG | + | chr1.1:12299935-12299954 | None:intergenic | 40.0% | |
| TTCATTCTTTGTTGGAGAGG+AGG | + | chr1.1:12300734-12300753 | None:intergenic | 40.0% | |
| TTGCAATGTGTAAGCTTACC+TGG | + | chr1.1:12303254-12303273 | None:intergenic | 40.0% | |
| TTTGCCTTGAAATTGTTGGG+TGG | + | chr1.1:12301331-12301350 | None:intergenic | 40.0% | |
| ! | ACAAGTGGCAAAGTTGGTTA+GGG | + | chr1.1:12298704-12298723 | None:intergenic | 40.0% |
| ! | ACAATCGTTCTGGATACATC+TGG | - | chr1.1:12303171-12303190 | MS.gene31689:intron | 40.0% |
| ! | ACGGGATGACAGCAATTTTA+AGG | + | chr1.1:12302892-12302911 | None:intergenic | 40.0% |
| ! | AGGAATTTGCACTGGCAAAA+TGG | + | chr1.1:12302950-12302969 | None:intergenic | 40.0% |
| ! | ATCCAAGTCCCCTTTTATTG+TGG | + | chr1.1:12299004-12299023 | None:intergenic | 40.0% |
| ! | CCAAATGTCTATTGGTTGCT+AGG | + | chr1.1:12300906-12300925 | None:intergenic | 40.0% |
| ! | CGATTTGTTCTCCGATTGTT+AGG | - | chr1.1:12298818-12298837 | MS.gene31689:intron | 40.0% |
| ! | GTATCTCTAGCTTCTCTAAG+CGG | + | chr1.1:12297353-12297372 | None:intergenic | 40.0% |
| ! | TACCTGGATAGCAGAAGTAT+AGG | + | chr1.1:12303238-12303257 | None:intergenic | 40.0% |
| ! | TCTAGGATTCGGTTTCTGAT+GGG | + | chr1.1:12301855-12301874 | None:intergenic | 40.0% |
| ! | TCTCCATGTTTTCTGCAACA+TGG | + | chr1.1:12300989-12301008 | None:intergenic | 40.0% |
| ! | TGGGCTTTTGACCAAAATGA+AGG | + | chr1.1:12301491-12301510 | None:intergenic | 40.0% |
| ! | TGTTTTCTGCAACATGGACT+AGG | + | chr1.1:12300983-12301002 | None:intergenic | 40.0% |
| ! | TTTGAGGCCCAAATGTCTAT+TGG | + | chr1.1:12300914-12300933 | None:intergenic | 40.0% |
| !! | CCGATTTCTGTTTCTGTTCA+TGG | + | chr1.1:12302318-12302337 | None:intergenic | 40.0% |
| !! | GAGTGATTTATGATGATGGC+TGG | - | chr1.1:12301007-12301026 | MS.gene31689:intron | 40.0% |
| !! | GCTGTTTTCATTAGCTGTCT+TGG | + | chr1.1:12297879-12297898 | None:intergenic | 40.0% |
| !! | GGTAAAAAGGAATTTGCTGC+AGG | - | chr1.1:12302139-12302158 | MS.gene31689:intron | 40.0% |
| !! | TTCTAGGATTCGGTTTCTGA+TGG | + | chr1.1:12301856-12301875 | None:intergenic | 40.0% |
| AAAACCAGTAGAAGTGGGGT+GGG | + | chr1.1:12299186-12299205 | None:intergenic | 45.0% | |
| AAAATGGCACCTGTTGTTGG+AGG | - | chr1.1:12302099-12302118 | MS.gene31689:intron | 45.0% | |
| AACAGCTTAGCGTAACACCT+AGG | + | chr1.1:12298225-12298244 | None:intergenic | 45.0% | |
| AACCCATGTGACAATCGTTC+TGG | - | chr1.1:12303161-12303180 | MS.gene31689:intron | 45.0% | |
| AAGAATCTAGAGAGAGGGGA+GGG | - | chr1.1:12300105-12300124 | MS.gene31689:intron | 45.0% | |
| AATGGACATGCCGCATAAGT+GGG | - | chr1.1:12301145-12301164 | MS.gene31689:intron | 45.0% | |
| ACAATCGGAGAACAAATCGG+AGG | + | chr1.1:12298817-12298836 | None:intergenic | 45.0% | |
| ACAATGCATTGTATGGCGTG+AGG | - | chr1.1:12299522-12299541 | MS.gene31689:intron | 45.0% | |
| ACAGCTCATGGCATGTTCAT+AGG | - | chr1.1:12297825-12297844 | MS.gene31689:intron | 45.0% | |
| ACGACCACCCAACAATTTCA+AGG | - | chr1.1:12301324-12301343 | MS.gene31689:intron | 45.0% | |
| ACGTTCAAGCTCATCAAGCA+TGG | + | chr1.1:12301190-12301209 | None:intergenic | 45.0% | |
| AGAAAAGCAACACTAGGAGG+TGG | + | chr1.1:12299932-12299951 | None:intergenic | 45.0% | |
| AGACATGAAGGGTAATGACG+TGG | - | chr1.1:12301545-12301564 | MS.gene31689:intron | 45.0% | |
| AGAGAGAGAACAGAACAGTC+CGG | + | chr1.1:12302355-12302374 | None:intergenic | 45.0% | |
| AGATGGACAGAAGCAGACAA+AGG | - | chr1.1:12303017-12303036 | MS.gene31689:intron | 45.0% | |
| AGTTGTCCGACACCATTACA+AGG | - | chr1.1:12298881-12298900 | MS.gene31689:intron | 45.0% | |
| ATGAAGGGTAATGACGTGGA+GGG | - | chr1.1:12301549-12301568 | MS.gene31689:intron | 45.0% | |
| ATTGAGCTTATGGGCCTGTT+TGG | - | chr1.1:12297741-12297760 | MS.gene31689:intron | 45.0% | |
| CAACACACAAGTGGCAAAGT+TGG | + | chr1.1:12298710-12298729 | None:intergenic | 45.0% | |
| CAAGGTTCATAGTGCGACTT+TGG | + | chr1.1:12298975-12298994 | None:intergenic | 45.0% | |
| CATGGAATGCATGTGATGCA+TGG | - | chr1.1:12301579-12301598 | MS.gene31689:CDS | 45.0% | |
| CGAAATATCGAAGCGGGAAA+AGG | + | chr1.1:12297292-12297311 | None:intergenic | 45.0% | |
| CTTCACTCTTTGCCTAGTCA+AGG | + | chr1.1:12303966-12303985 | None:intergenic | 45.0% | |
| CTTGACTAGGCAAAGAGTGA+AGG | - | chr1.1:12303964-12303983 | MS.gene31689:CDS | 45.0% | |
| GAACGTTTCAACCATATGGG+TGG | - | chr1.1:12301204-12301223 | MS.gene31689:intron | 45.0% | |
| GACAACTGCTTTGACACAAC+CGG | + | chr1.1:12298868-12298887 | None:intergenic | 45.0% | |
| GACGTTCGAAATATCGAAGC+GGG | + | chr1.1:12297298-12297317 | None:intergenic | 45.0% | |
| GAGAAAATGGCACCTGTTGT+TGG | - | chr1.1:12302096-12302115 | MS.gene31689:intron | 45.0% | |
| GCAACGAATCTGTGTGTACT+GGG | + | chr1.1:12302516-12302535 | None:intergenic | 45.0% | |
| GCAGAGAGGGATTGATTAGA+GGG | - | chr1.1:12300655-12300674 | MS.gene31689:intron | 45.0% | |
| GCATTATATAAGGGGGACAG+TGG | - | chr1.1:12301607-12301626 | MS.gene31689:CDS | 45.0% | |
| GCTGTAGCCATGAATGATGA+CGG | - | chr1.1:12302970-12302989 | MS.gene31689:intron | 45.0% | |
| GGAAGTTATGACTCCTTCCT+TGG | - | chr1.1:12298646-12298665 | MS.gene31689:intron | 45.0% | |
| GGAGGATTTGTCGTCTGAAA+TGG | - | chr1.1:12297247-12297266 | MS.gene31689:CDS | 45.0% | |
| GGTGAAAAACTAGCCATTGC+AGG | + | chr1.1:12302464-12302483 | None:intergenic | 45.0% | |
| GGTGATTAGGACCGGTAAAA+AGG | - | chr1.1:12302126-12302145 | MS.gene31689:intron | 45.0% | |
| GTCTGTTCAGGTGTTTGAAG+TGG | - | chr1.1:12302181-12302200 | MS.gene31689:intron | 45.0% | |
| TAAAACCAGTAGAAGTGGGG+TGG | + | chr1.1:12299187-12299206 | None:intergenic | 45.0% | |
| TAAGAATCTAGAGAGAGGGG+AGG | - | chr1.1:12300104-12300123 | MS.gene31689:intron | 45.0% | |
| TCAACCATATGGGTGGAAAC+TGG | - | chr1.1:12301211-12301230 | MS.gene31689:intron | 45.0% | |
| TCAGGGTTCTTGACCTCTTT+AGG | + | chr1.1:12300606-12300625 | None:intergenic | 45.0% | |
| TCAGTAGCATCAAAGCCAGA+TGG | - | chr1.1:12301965-12301984 | MS.gene31689:intron | 45.0% | |
| TCATCATTCATGGCTACAGC+AGG | + | chr1.1:12302970-12302989 | None:intergenic | 45.0% | |
| TCATCTGGATTACGAGACCA+AGG | + | chr1.1:12300832-12300851 | None:intergenic | 45.0% | |
| TGCAACGAATCTGTGTGTAC+TGG | + | chr1.1:12302517-12302536 | None:intergenic | 45.0% | |
| TGCATAAGCACTTGTGACAC+TGG | - | chr1.1:12297789-12297808 | MS.gene31689:intron | 45.0% | |
| TGCCTATACTTCTGCTATCC+AGG | - | chr1.1:12303233-12303252 | MS.gene31689:intron | 45.0% | |
| TGGGTCCTTGAAAGCTTCAA+AGG | + | chr1.1:12303549-12303568 | None:intergenic | 45.0% | |
| TGTCACATGGGTTTCCACTA+TGG | + | chr1.1:12303154-12303173 | None:intergenic | 45.0% | |
| TGTTCCAAATGCTGCTGCAA+CGG | - | chr1.1:12297226-12297245 | MS.gene31689:CDS | 45.0% | |
| TGTTGGAGGCAATGGTGATT+AGG | - | chr1.1:12302113-12302132 | MS.gene31689:intron | 45.0% | |
| TTATGCGGCATGTCCATTGT+TGG | + | chr1.1:12301143-12301162 | None:intergenic | 45.0% | |
| TTGAGAGAGTTGTCCTTGGT+TGG | - | chr1.1:12299413-12299432 | MS.gene31689:intron | 45.0% | |
| TTGGTCAAAAGCCCAAAGTG+TGG | - | chr1.1:12301496-12301515 | MS.gene31689:intron | 45.0% | |
| TTTCCTGCCTACTGCTTTGA+AGG | - | chr1.1:12299231-12299250 | MS.gene31689:intron | 45.0% | |
| TTTCTACGAGCCCACTTATG+CGG | + | chr1.1:12301158-12301177 | None:intergenic | 45.0% | |
| ! | AAGTATGCCATTTCTGGGTG+AGG | - | chr1.1:12302049-12302068 | MS.gene31689:intron | 45.0% |
| ! | CACAAGTGGCAAAGTTGGTT+AGG | + | chr1.1:12298705-12298724 | None:intergenic | 45.0% |
| ! | GAGAACAAATCGGAGGCATA+TGG | + | chr1.1:12298810-12298829 | None:intergenic | 45.0% |
| ! | GAGCAATTGGGCCTTCATTT+TGG | - | chr1.1:12301477-12301496 | MS.gene31689:intron | 45.0% |
| ! | GCAGAAGTATAGGCAAGAAC+TGG | + | chr1.1:12303228-12303247 | None:intergenic | 45.0% |
| ! | GTGCTGTTGCATCTGCTAAT+GGG | - | chr1.1:12298458-12298477 | MS.gene31689:intron | 45.0% |
| !! | ACAATCTCCCAAAAGCACCA+AGG | + | chr1.1:12301697-12301716 | None:intergenic | 45.0% |
| !! | GAGGTCCTTTGAAGCTTTCA+AGG | - | chr1.1:12303541-12303560 | MS.gene31689:intron | 45.0% |
| !! | GGTTGCACAAGATGATGGAA+AGG | + | chr1.1:12302572-12302591 | None:intergenic | 45.0% |
| !! | TTCTGCAACATGGACTAGGT+TGG | + | chr1.1:12300979-12300998 | None:intergenic | 45.0% |
| !!! | ATAGTTTTTATTTAATTAAA+AGG | - | chr1.1:12300004-12300023 | MS.gene31689:intron | 5.0% |
| AAACCAGTAGAAGTGGGGTG+GGG | + | chr1.1:12299185-12299204 | None:intergenic | 50.0% | |
| AAGGATGGAGCCATTTGGCT+TGG | - | chr1.1:12301276-12301295 | MS.gene31689:intron | 50.0% | |
| ACCAGTTCATAGGCCCTGTT+TGG | + | chr1.1:12298005-12298024 | None:intergenic | 50.0% | |
| AGAGAGTTGTCCTTGGTTGG+TGG | - | chr1.1:12299416-12299435 | MS.gene31689:intron | 50.0% | |
| AGCTGCATGGATGGCTTACT+TGG | - | chr1.1:12299442-12299461 | MS.gene31689:intron | 50.0% | |
| AGGACTGTGTTGCCTTGACT+AGG | - | chr1.1:12303951-12303970 | MS.gene31689:CDS | 50.0% | |
| AGGGGACTTGGATGGAAAAG+AGG | - | chr1.1:12299011-12299030 | MS.gene31689:intron | 50.0% | |
| AGTAGGCAGGAAATCACCAC+AGG | + | chr1.1:12299224-12299243 | None:intergenic | 50.0% | |
| ATAACTGAGCCCTCCAAACC+AGG | - | chr1.1:12301880-12301899 | MS.gene31689:intron | 50.0% | |
| CAAGAAGCCTGTGGATACCA+TGG | - | chr1.1:12302223-12302242 | MS.gene31689:intron | 50.0% | |
| CAATGGACATGCCGCATAAG+TGG | - | chr1.1:12301144-12301163 | MS.gene31689:intron | 50.0% | |
| CAGGAAATCACCACAGGAAC+AGG | + | chr1.1:12299218-12299237 | None:intergenic | 50.0% | |
| CATGAAGGGTAATGACGTGG+AGG | - | chr1.1:12301548-12301567 | MS.gene31689:intron | 50.0% | |
| CGGTCACAATGTGCAGGTAA+TGG | - | chr1.1:12301988-12302007 | MS.gene31689:intron | 50.0% | |
| CTCTTGACCTCACCCAGAAA+TGG | + | chr1.1:12302059-12302078 | None:intergenic | 50.0% | |
| GAAATTGTTGGGTGGTCGTC+AGG | + | chr1.1:12301323-12301342 | None:intergenic | 50.0% | |
| GAACCTAAACAACCCTCGTC+TGG | + | chr1.1:12298677-12298696 | None:intergenic | 50.0% | |
| GAGGCAATGGTGATTAGGAC+CGG | - | chr1.1:12302118-12302137 | MS.gene31689:intron | 50.0% | |
| GCTACAGCAGGAATTTGCAC+TGG | + | chr1.1:12302958-12302977 | None:intergenic | 50.0% | |
| GGCAGAGAGGGATTGATTAG+AGG | - | chr1.1:12300654-12300673 | MS.gene31689:intron | 50.0% | |
| GGCTGCCGGAATAACAGAAA+GGG | + | chr1.1:12300435-12300454 | None:intergenic | 50.0% | |
| GGGTCAGCTCTTGTGAAGAT+TGG | - | chr1.1:12298478-12298497 | MS.gene31689:intron | 50.0% | |
| GTAGCATCAAAGCCAGATGG+CGG | - | chr1.1:12301968-12301987 | MS.gene31689:intron | 50.0% | |
| GTTCTCTCTCTCGCATCTCT+GGG | - | chr1.1:12302364-12302383 | MS.gene31689:CDS | 50.0% | |
| TCACCAGACGAGGGTTGTTT+AGG | - | chr1.1:12298671-12298690 | MS.gene31689:intron | 50.0% | |
| TCACCATTGCCTCCAACAAC+AGG | + | chr1.1:12302111-12302130 | None:intergenic | 50.0% | |
| TCCAAACAGGGCCTATGAAC+TGG | - | chr1.1:12298001-12298020 | MS.gene31689:intron | 50.0% | |
| TCTGCGATCATGCTACCTCT+GGG | - | chr1.1:12302284-12302303 | MS.gene31689:intron | 50.0% | |
| TGGTGGAAAAGCTGCATGGA+TGG | - | chr1.1:12299433-12299452 | MS.gene31689:intron | 50.0% | |
| TGGTTGCTAGGCATAGCATG+AGG | + | chr1.1:12300894-12300913 | None:intergenic | 50.0% | |
| TGTCCTTCAAAGCAGTAGGC+AGG | + | chr1.1:12299237-12299256 | None:intergenic | 50.0% | |
| TGTTCTCCGATTGTTAGGCC+TGG | - | chr1.1:12298823-12298842 | MS.gene31689:intron | 50.0% | |
| TGTTCTCTCTCTCGCATCTC+TGG | - | chr1.1:12302363-12302382 | MS.gene31689:CDS | 50.0% | |
| TTCTGCGATCATGCTACCTC+TGG | - | chr1.1:12302283-12302302 | MS.gene31689:intron | 50.0% | |
| TTTCTGGGTGAGGTCAAGAG+TGG | - | chr1.1:12302059-12302078 | MS.gene31689:intron | 50.0% | |
| TTTGACCTGCAAGAAGCCTG+TGG | - | chr1.1:12302214-12302233 | MS.gene31689:intron | 50.0% | |
| ! | AACACGTAGTGGGGTCACTT+TGG | + | chr1.1:12299121-12299140 | None:intergenic | 50.0% |
| ! | AAGGTGAAGCGCTTGTCATC+TGG | - | chr1.1:12300949-12300968 | MS.gene31689:intron | 50.0% |
| ! | ATCGGTGGGATCTTTTGTGC+CGG | - | chr1.1:12302333-12302352 | MS.gene31689:intron | 50.0% |
| ! | CGGAGGCATATGGAAGTCTA+TGG | + | chr1.1:12298800-12298819 | None:intergenic | 50.0% |
| ! | TGCAGCTTTTCCACCAACCA+AGG | + | chr1.1:12299429-12299448 | None:intergenic | 50.0% |
| !! | AGTTCTGAGGCCAAGCCAAA+TGG | + | chr1.1:12301289-12301308 | None:intergenic | 50.0% |
| !! | GGTGCTGTTGCATCTGCTAA+TGG | - | chr1.1:12298457-12298476 | MS.gene31689:intron | 50.0% |
| !! | TGATGGCTGGTTTGAGAAGC+AGG | - | chr1.1:12301020-12301039 | MS.gene31689:intron | 50.0% |
| !! | TGGTTGGTGGAAAAGCTGCA+TGG | - | chr1.1:12299429-12299448 | MS.gene31689:intron | 50.0% |
| AACCAGTAGAAGTGGGGTGG+GGG | + | chr1.1:12299184-12299203 | None:intergenic | 55.0% | |
| AGGCCCAAGTTGCCTGTTTG+GGG | - | chr1.1:12301900-12301919 | MS.gene31689:intron | 55.0% | |
| CAGGCCCAAGTTGCCTGTTT+GGG | - | chr1.1:12301899-12301918 | MS.gene31689:intron | 55.0% | |
| CCTGAACAGACACCATGTCC+AGG | + | chr1.1:12302172-12302191 | None:intergenic | 55.0% | |
| CCTGGACATGGTGTCTGTTC+AGG | - | chr1.1:12302169-12302188 | MS.gene31689:intron | 55.0% | |
| CGGCTGCCGGAATAACAGAA+AGG | + | chr1.1:12300436-12300455 | None:intergenic | 55.0% | |
| GAACAGACACCATGTCCAGG+TGG | + | chr1.1:12302169-12302188 | None:intergenic | 55.0% | |
| GACCCCCAAACAGGCAACTT+GGG | + | chr1.1:12301906-12301925 | None:intergenic | 55.0% | |
| GACGTGGAGGGAATGATGCA+TGG | - | chr1.1:12301561-12301580 | MS.gene31689:intron | 55.0% | |
| GCACCTGTTGTTGGAGGCAA+TGG | - | chr1.1:12302105-12302124 | MS.gene31689:intron | 55.0% | |
| GGTATCCACAGGCTTCTTGC+AGG | + | chr1.1:12302222-12302241 | None:intergenic | 55.0% | |
| TACGTGCATTGTGGGAGCCT+TGG | - | chr1.1:12301677-12301696 | MS.gene31689:intron | 55.0% | |
| TCCAAATGCTGCTGCAACGG+AGG | - | chr1.1:12297229-12297248 | MS.gene31689:CDS | 55.0% | |
| TCCTCCGTTGCAGCAGCATT+TGG | + | chr1.1:12297233-12297252 | None:intergenic | 55.0% | |
| TCCTTGGAGTCACCAGACGA+GGG | - | chr1.1:12298662-12298681 | MS.gene31689:intron | 55.0% | |
| TCGTCTGGTGACTCCAAGGA+AGG | + | chr1.1:12298662-12298681 | None:intergenic | 55.0% | |
| TCTGTTATTCCGGCAGCCGA+CGG | - | chr1.1:12300437-12300456 | MS.gene31689:intron | 55.0% | |
| TGCACATTGTGACCGCCATC+TGG | + | chr1.1:12301983-12302002 | None:intergenic | 55.0% | |
| TGCAGCATGCGACTCTCATC+AGG | + | chr1.1:12301115-12301134 | None:intergenic | 55.0% | |
| TGCTGAGCTGGCATTTCCGT+CGG | + | chr1.1:12300456-12300475 | None:intergenic | 55.0% | |
| TTCCTTGGAGTCACCAGACG+AGG | - | chr1.1:12298661-12298680 | MS.gene31689:intron | 55.0% | |
| ! | AGATGGCGGTCACAATGTGC+AGG | - | chr1.1:12301982-12302001 | MS.gene31689:intron | 55.0% |
| !! | CAACTTGGGCCTGGTTTGGA+GGG | + | chr1.1:12301892-12301911 | None:intergenic | 55.0% |
| !! | GCTCTTTAGGACCCCCAAAC+AGG | + | chr1.1:12301915-12301934 | None:intergenic | 55.0% |
| !!! | GTGGGAGCCTTGGTGCTTTT+GGG | - | chr1.1:12301687-12301706 | MS.gene31689:intron | 55.0% |
| !!! | TGTGGGAGCCTTGGTGCTTT+TGG | - | chr1.1:12301686-12301705 | MS.gene31689:intron | 55.0% |
| ACCCTCGTCTGGTGACTCCA+AGG | + | chr1.1:12298666-12298685 | None:intergenic | 60.0% | |
| AGCAGGTGGTTGTGCTGAGC+TGG | + | chr1.1:12300468-12300487 | None:intergenic | 60.0% | |
| CAGGCAACTTGGGCCTGGTT+TGG | + | chr1.1:12301896-12301915 | None:intergenic | 60.0% | |
| CCAAACAGGCAACTTGGGCC+TGG | + | chr1.1:12301901-12301920 | None:intergenic | 60.0% | |
| CCAGGCCCAAGTTGCCTGTT+TGG | - | chr1.1:12301898-12301917 | MS.gene31689:intron | 60.0% | |
| CTCCGATTGTTAGGCCTGGC+AGG | - | chr1.1:12298827-12298846 | MS.gene31689:intron | 60.0% | |
| CTCTCGCATCTCTGGGTTCG+CGG | - | chr1.1:12302371-12302390 | MS.gene31689:CDS | 60.0% | |
| GCATGCGACTCTCATCAGGC+AGG | + | chr1.1:12301111-12301130 | None:intergenic | 60.0% | |
| GGACCCCCAAACAGGCAACT+TGG | + | chr1.1:12301907-12301926 | None:intergenic | 60.0% | |
| GGCCCAAGTTGCCTGTTTGG+GGG | - | chr1.1:12301901-12301920 | MS.gene31689:intron | 60.0% | |
| GGCCTGCCAGGCCTAACAAT+CGG | + | chr1.1:12298832-12298851 | None:intergenic | 60.0% | |
| TAGGCAAGAACTGGCCCACC+AGG | + | chr1.1:12303219-12303238 | None:intergenic | 60.0% | |
| TCTCGCATCTCTGGGTTCGC+GGG | - | chr1.1:12302372-12302391 | MS.gene31689:CDS | 60.0% | |
| TTCCCCCACCCCACTTCTAC+TGG | - | chr1.1:12299179-12299198 | MS.gene31689:intron | 60.0% | |
| TTTGCTGCAGGACTGCCACC+TGG | - | chr1.1:12302151-12302170 | MS.gene31689:intron | 60.0% | |
| ! | ACAACCGGCTCTGCTTCAGC+AGG | + | chr1.1:12298853-12298872 | None:intergenic | 60.0% |
| !! | GCAACTTGGGCCTGGTTTGG+AGG | + | chr1.1:12301893-12301912 | None:intergenic | 60.0% |
| !! | TTCATGGCGGACACTCCCAG+AGG | + | chr1.1:12302302-12302321 | None:intergenic | 60.0% |
| CAGGCCTGCTGAAGCAGAGC+CGG | - | chr1.1:12298846-12298865 | MS.gene31689:intron | 65.0% | |
| CTAGAGAGAGGGGAGGGCGA+GGG | - | chr1.1:12300111-12300130 | MS.gene31689:intron | 65.0% | |
| GCAGGACTGCCACCTGGACA+TGG | - | chr1.1:12302157-12302176 | MS.gene31689:intron | 65.0% | |
| TCTAGAGAGAGGGGAGGGCG+AGG | - | chr1.1:12300110-12300129 | MS.gene31689:intron | 65.0% | |
| TCTGCTTCAGCAGGCCTGCC+AGG | + | chr1.1:12298844-12298863 | None:intergenic | 65.0% | |
| ! | CTGGCATTTCCGTCGGCTGC+CGG | + | chr1.1:12300449-12300468 | None:intergenic | 65.0% |
| GCATCTCTGGGTTCGCGGGC+TGG | - | chr1.1:12302376-12302395 | MS.gene31689:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 12297221 | 12304036 | 12297221 | ID=MS.gene31689 |
| chr1.1 | mRNA | 12297221 | 12304036 | 12297221 | ID=MS.gene31689.t1;Parent=MS.gene31689 |
| chr1.1 | exon | 12303871 | 12304036 | 12303871 | ID=MS.gene31689.t1.exon1;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12303871 | 12304036 | 12303871 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12302750 | 12302799 | 12302750 | ID=MS.gene31689.t1.exon2;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12302750 | 12302799 | 12302750 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12302565 | 12302634 | 12302565 | ID=MS.gene31689.t1.exon3;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12302565 | 12302634 | 12302565 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12302355 | 12302460 | 12302355 | ID=MS.gene31689.t1.exon4;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12302355 | 12302460 | 12302355 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12301794 | 12301860 | 12301794 | ID=MS.gene31689.t1.exon5;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12301794 | 12301860 | 12301794 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12301578 | 12301653 | 12301578 | ID=MS.gene31689.t1.exon6;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12301578 | 12301653 | 12301578 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12298003 | 12298298 | 12298003 | ID=MS.gene31689.t1.exon7;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12298003 | 12298298 | 12298003 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| chr1.1 | exon | 12297221 | 12297304 | 12297221 | ID=MS.gene31689.t1.exon8;Parent=MS.gene31689.t1 |
| chr1.1 | CDS | 12297221 | 12297304 | 12297221 | ID=cds.MS.gene31689.t1;Parent=MS.gene31689.t1 |
| Gene Sequence |
| Protein sequence |
