Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32973.t1 | XP_003589039.2 | 88.2 | 644 | 57 | 3 | 1 | 642 | 1 | 627 | 4.50E-199 | 704.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32973.t1 | Q32PX7 | 34.2 | 184 | 103 | 4 | 108 | 277 | 265 | 444 | 5.4e-20 | 100.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32973.t1 | G7IBA6 | 88.2 | 644 | 57 | 3 | 1 | 642 | 1 | 627 | 3.2e-199 | 704.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04915 | MS.gene32973 | -0.813847 | 2.08E-51 | -1.69E-46 |
MS.gene04917 | MS.gene32973 | -0.81126 | 7.65E-51 | -1.69E-46 |
MS.gene050361 | MS.gene32973 | -0.832424 | 9.53E-56 | -1.69E-46 |
MS.gene050762 | MS.gene32973 | -0.843244 | 1.58E-58 | -1.69E-46 |
MS.gene050763 | MS.gene32973 | -0.841151 | 5.65E-58 | -1.69E-46 |
MS.gene051631 | MS.gene32973 | 0.98765 | 4.98E-171 | -1.69E-46 |
MS.gene052242 | MS.gene32973 | 0.816774 | 4.65E-52 | -1.69E-46 |
MS.gene054379 | MS.gene32973 | -0.831297 | 1.81E-55 | -1.69E-46 |
MS.gene056480 | MS.gene32973 | -0.806396 | 8.39E-50 | -1.69E-46 |
MS.gene057451 | MS.gene32973 | 0.815556 | 8.70E-52 | -1.69E-46 |
MS.gene060869 | MS.gene32973 | -0.805011 | 1.64E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene32973 | MS.gene03206 | PPI |
MS.gene46271 | MS.gene32973 | PPI |
MS.gene32973 | MS.gene013791 | PPI |
MS.gene013796 | MS.gene32973 | PPI |
MS.gene32973 | MS.gene73790 | PPI |
MS.gene32973 | MS.gene46269 | PPI |
MS.gene02577 | MS.gene32973 | PPI |
MS.gene73791 | MS.gene32973 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32973.t1 | MTR_1g016760 | 91.975 | 648 | 25 | 4 | 1 | 642 | 1 | 627 | 0.0 | 1052 |
MS.gene32973.t1 | MTR_3g104280 | 64.062 | 640 | 149 | 17 | 1 | 612 | 1 | 587 | 0.0 | 652 |
MS.gene32973.t1 | MTR_3g104270 | 62.593 | 671 | 156 | 19 | 1 | 642 | 1 | 605 | 0.0 | 628 |
MS.gene32973.t1 | MTR_5g008420 | 38.966 | 580 | 216 | 32 | 112 | 610 | 185 | 707 | 3.73e-66 | 232 |
MS.gene32973.t1 | MTR_1g090773 | 28.641 | 206 | 122 | 6 | 115 | 307 | 39 | 232 | 1.23e-12 | 70.1 |
MS.gene32973.t1 | MTR_7g010340 | 28.750 | 480 | 231 | 26 | 112 | 549 | 123 | 533 | 1.05e-11 | 68.2 |
MS.gene32973.t1 | MTR_7g010340 | 28.750 | 480 | 231 | 26 | 112 | 549 | 107 | 517 | 1.24e-11 | 68.2 |
MS.gene32973.t1 | MTR_4g093650 | 29.747 | 158 | 87 | 5 | 122 | 267 | 30 | 175 | 7.65e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32973.t1 | AT2G25970 | 52.782 | 665 | 195 | 33 | 1 | 611 | 1 | 600 | 1.29e-142 | 429 |
MS.gene32973.t1 | AT4G10070 | 44.882 | 254 | 125 | 7 | 110 | 353 | 174 | 422 | 3.15e-54 | 197 |
MS.gene32973.t1 | AT1G33680 | 36.464 | 543 | 266 | 25 | 110 | 618 | 230 | 727 | 4.78e-52 | 192 |
MS.gene32973.t1 | AT5G04430 | 27.653 | 311 | 158 | 12 | 69 | 366 | 9 | 265 | 8.48e-16 | 79.7 |
MS.gene32973.t1 | AT5G04430 | 29.817 | 218 | 115 | 8 | 69 | 279 | 9 | 195 | 6.61e-14 | 73.6 |
Find 258 sgRNAs with CRISPR-Local
Find 504 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAGGCCCACCTTGTTATT+TGG | 0.118001 | 1.1:+5637279 | None:intergenic |
GTTCGTCGTACTTGCGTTTC+AGG | 0.131446 | 1.1:+5639022 | None:intergenic |
ACTAATCTATTTGGAGAATT+AGG | 0.181216 | 1.1:+5637969 | None:intergenic |
GGAAGGGTTGGTGTTATTAT+TGG | 0.182914 | 1.1:-5638071 | MS.gene32973:CDS |
GTAAGCTCAACTAATCTATT+TGG | 0.259507 | 1.1:+5637960 | None:intergenic |
AGGAGGACCGTTGTCGAATT+TGG | 0.260354 | 1.1:+5638825 | None:intergenic |
CTTTCAGTGGATGTGTCGCC+TGG | 0.292557 | 1.1:+5636845 | None:intergenic |
CTTGTTATTTGGAATCTTCA+TGG | 0.296247 | 1.1:+5637290 | None:intergenic |
GCTCTTTGAGAGCCTGCTTC+TGG | 0.301980 | 1.1:+5632895 | None:intergenic |
AATAGATTAGTTGAGCTTAC+TGG | 0.304836 | 1.1:-5637957 | MS.gene32973:CDS |
TACAACTGGAGCAAGAATTC+AGG | 0.310281 | 1.1:-5637111 | MS.gene32973:intron |
AAATCAGCGGTGGCGGGAGG+GGG | 0.314498 | 1.1:+5638931 | None:intergenic |
CCTAATGCTGCTGGAGGTTA+TGG | 0.319168 | 1.1:-5632967 | MS.gene32973:CDS |
GGTGGATAGTTGGCAGCATT+TGG | 0.321788 | 1.1:+5633135 | None:intergenic |
AATCCAAGTTACCCGTGATA+TGG | 0.322309 | 1.1:-5638000 | MS.gene32973:CDS |
ATCCATAGTTGGTGGTAGTT+TGG | 0.325878 | 1.1:+5633232 | None:intergenic |
GAAATCAGCGGTGGCGGGAG+GGG | 0.335247 | 1.1:+5638930 | None:intergenic |
GCCTGCTGAGCTCCCTGTGC+AGG | 0.353119 | 1.1:+5632688 | None:intergenic |
AAGCTCGGCCACCCTCTAGC+TGG | 0.354172 | 1.1:-5633680 | MS.gene32973:CDS |
GGCCAAACTACCACCAACTA+TGG | 0.354270 | 1.1:-5633234 | MS.gene32973:CDS |
TTGAGAGCCTGCTTCTGGTT+GGG | 0.355943 | 1.1:+5632900 | None:intergenic |
ATAACACCAACCCTTCCATT+AGG | 0.362493 | 1.1:+5638077 | None:intergenic |
CATCCATATCACGGGTAACT+TGG | 0.363155 | 1.1:+5637997 | None:intergenic |
TCTTGAGCTGACCCATAGCT+TGG | 0.369291 | 1.1:+5633258 | None:intergenic |
TCTCAAAGAGCACCACCTTC+TGG | 0.375855 | 1.1:-5632883 | MS.gene32973:CDS |
CCTCAAACACAGTCTGGTTA+TGG | 0.378826 | 1.1:-5633048 | MS.gene32973:CDS |
TAACACCAACCCTTCCATTA+GGG | 0.380545 | 1.1:+5638078 | None:intergenic |
CTTGCTGAGGCACATTGTAC+TGG | 0.386367 | 1.1:+5633586 | None:intergenic |
CTGGTGGATATTCTACCAAT+TGG | 0.388293 | 1.1:-5633536 | MS.gene32973:CDS |
GTCCCATCAGCTGGAGGTGC+AGG | 0.392215 | 1.1:+5633432 | None:intergenic |
CAGCATTTGGGCTAGGCTGT+TGG | 0.392417 | 1.1:+5633148 | None:intergenic |
TATGATCAGCAGCAAATCTA+TGG | 0.393101 | 1.1:-5633288 | MS.gene32973:CDS |
CTTGAGCTGACCCATAGCTT+GGG | 0.393959 | 1.1:+5633259 | None:intergenic |
GGGGCTGCTCAGCCAAGTTA+TGG | 0.394510 | 1.1:-5633108 | MS.gene32973:CDS |
ATCCGCTGGTTATAACCAAC+CGG | 0.399371 | 1.1:-5633385 | MS.gene32973:CDS |
GCTTCTCAACAACCTGGTTA+TGG | 0.399715 | 1.1:-5633645 | MS.gene32973:CDS |
CCATATGCTGCTTGGGAGGT+TGG | 0.401024 | 1.1:+5633078 | None:intergenic |
AATTGAATCTGCAAAACAAT+TGG | 0.402759 | 1.1:-5636792 | MS.gene32973:CDS |
CCATAACCTCCAGCAGCATT+AGG | 0.408998 | 1.1:+5632967 | None:intergenic |
AGAGCACCACCTTCTGGTTA+TGG | 0.409292 | 1.1:-5632877 | MS.gene32973:CDS |
ACCTGCACAGGGAGCTCAGC+AGG | 0.412517 | 1.1:-5632689 | MS.gene32973:CDS |
ACCACCAACTATGGATCAAA+AGG | 0.413986 | 1.1:-5633225 | MS.gene32973:CDS |
CAGGCTGAGTCTGGAGGTAA+TGG | 0.416113 | 1.1:-5637360 | MS.gene32973:CDS |
TTGGCTGCCATATGCTGCTT+GGG | 0.417515 | 1.1:+5633071 | None:intergenic |
AAGAGTATGCAAGCTACAAC+TGG | 0.418295 | 1.1:-5637125 | MS.gene32973:CDS |
GCTGGGCAGTTGCAGTGGAC+TGG | 0.419977 | 1.1:+5633511 | None:intergenic |
CCAACCTCCCAAGCAGCATA+TGG | 0.421508 | 1.1:-5633078 | MS.gene32973:CDS |
TATCAACAACCACCACAATC+AGG | 0.423047 | 1.1:-5633330 | MS.gene32973:CDS |
AGGAGGTCCGTCGGAGAAAC+CGG | 0.425705 | 1.1:+5638975 | None:intergenic |
GTTGGTGTTATTATTGGAAA+AGG | 0.426073 | 1.1:-5638065 | MS.gene32973:CDS |
GGGCTGCTCAGCCAAGTTAT+GGG | 0.426222 | 1.1:-5633107 | MS.gene32973:CDS |
AATCAGCGGTGGCGGGAGGG+GGG | 0.427004 | 1.1:+5638932 | None:intergenic |
GGTCCTGCACCTCCAGCTGA+TGG | 0.427874 | 1.1:-5633435 | MS.gene32973:CDS |
GTCGCCGCTCGTCTCCTCTC+TGG | 0.429663 | 1.1:-5638880 | MS.gene32973:CDS |
GGTTATGGTCCTCCATCATA+TGG | 0.431553 | 1.1:-5632862 | MS.gene32973:CDS |
CTTGTTACTCGACGAATGAC+TGG | 0.434663 | 1.1:-5637336 | MS.gene32973:CDS |
AAGGTTGGACAGGTGGAACT+TGG | 0.436476 | 1.1:+5633193 | None:intergenic |
GTGGATAGTTGGCAGCATTT+GGG | 0.441115 | 1.1:+5633136 | None:intergenic |
GCAGGCGGTCAACCTGGTTA+TGG | 0.441342 | 1.1:-5632817 | MS.gene32973:CDS |
GAGTAACCACCGGACATTGA+TGG | 0.441729 | 1.1:+5633717 | None:intergenic |
TTCGTCGTACTTGCGTTTCA+GGG | 0.443304 | 1.1:+5639023 | None:intergenic |
AGCTAGAGGGTGGCCGAGCT+TGG | 0.443328 | 1.1:+5633682 | None:intergenic |
AGCTCGGCCACCCTCTAGCT+GGG | 0.447088 | 1.1:-5633679 | MS.gene32973:CDS |
CCATAACCAGACTGTGTTTG+AGG | 0.447473 | 1.1:+5633048 | None:intergenic |
CTACAGGTTGGTCTTATAAT+CGG | 0.447978 | 1.1:-5637167 | MS.gene32973:intron |
CCGTCATATGGTGCTCCTGC+AGG | 0.448573 | 1.1:-5632835 | MS.gene32973:CDS |
GGTGTTATTATTGGAAAAGG+TGG | 0.450115 | 1.1:-5638062 | MS.gene32973:CDS |
AAGAAGATTGAAATCCCTAA+TGG | 0.454062 | 1.1:-5638092 | MS.gene32973:CDS |
GTTGGCTGCCATATGCTGCT+TGG | 0.454556 | 1.1:+5633070 | None:intergenic |
GAGTTCGAAATCAGCGGTGG+CGG | 0.458495 | 1.1:+5638924 | None:intergenic |
CTCCCTCTGATGTCGTCAAA+CGG | 0.458508 | 1.1:-5638849 | MS.gene32973:CDS |
TCGTACTTGCGTTTCAGGGA+AGG | 0.461758 | 1.1:+5639027 | None:intergenic |
TTTGAGAGCCTGCTTCTGGT+TGG | 0.462877 | 1.1:+5632899 | None:intergenic |
TCATATGGTCCTCCGTCATA+TGG | 0.465714 | 1.1:-5632847 | MS.gene32973:CDS |
AAGTATCTTCAGTTGCAATC+TGG | 0.466830 | 1.1:-5638029 | MS.gene32973:CDS |
CAACCTTCACAACAAGGTTA+TGG | 0.467298 | 1.1:-5633177 | MS.gene32973:CDS |
CTCAGCAAGGTTACCAAGCT+CGG | 0.468815 | 1.1:-5633695 | MS.gene32973:CDS |
CCTTCCCCTTACGATTCATC+AGG | 0.470277 | 1.1:-5638805 | MS.gene32973:intron |
CGAAATCAGCGGTGGCGGGA+GGG | 0.470982 | 1.1:+5638929 | None:intergenic |
GGTTATCCTCCCCACTCAGC+TGG | 0.471437 | 1.1:-5633555 | MS.gene32973:CDS |
GTCCTGCACCTCCAGCTGAT+GGG | 0.471850 | 1.1:-5633434 | MS.gene32973:CDS |
CAGGCACCACATGGTTCCTA+TGG | 0.475333 | 1.1:-5632793 | MS.gene32973:CDS |
TAGTTGGCAGCATTTGGGCT+AGG | 0.476978 | 1.1:+5633141 | None:intergenic |
AGCCCCTTGTGGTGGATAGT+TGG | 0.478569 | 1.1:+5633125 | None:intergenic |
GCTCCTGCAGGCGGTCAACC+TGG | 0.480776 | 1.1:-5632823 | MS.gene32973:CDS |
GCTGGAGGTTATGGTCAACC+TGG | 0.480952 | 1.1:-5632958 | MS.gene32973:CDS |
CCACATGGTTCCTATGGTGC+TGG | 0.481020 | 1.1:-5632787 | MS.gene32973:CDS |
CATAACCTTGTTGTGAAGGT+TGG | 0.482142 | 1.1:+5633178 | None:intergenic |
TGCAGTGGACTGGTCCCAAT+TGG | 0.482391 | 1.1:+5633521 | None:intergenic |
TATGGCTCAGCCCCAAGCTA+TGG | 0.483146 | 1.1:-5633270 | MS.gene32973:CDS |
GCCCGTGGTGGTAGCTATGA+TGG | 0.484526 | 1.1:-5632715 | MS.gene32973:CDS |
TGGTTATAACCAACCGGGGC+AGG | 0.484946 | 1.1:-5633379 | MS.gene32973:CDS |
TATTGCGATTCGTCAGCCAT+TGG | 0.486803 | 1.1:+5639063 | None:intergenic |
TTTCAGTGGATGTGTCGCCT+GGG | 0.488134 | 1.1:+5636846 | None:intergenic |
TGCTGCTGATCATATGATGT+TGG | 0.488312 | 1.1:+5633297 | None:intergenic |
AGAATATCCACCAGCTGAGT+GGG | 0.492850 | 1.1:+5633545 | None:intergenic |
CTATGATGGAGCACCTGCAC+AGG | 0.493101 | 1.1:-5632701 | MS.gene32973:CDS |
CTATGGTGCTGGTTATCCTC+AGG | 0.495560 | 1.1:-5632776 | MS.gene32973:CDS |
TGGTGGATATTCTACCAATT+GGG | 0.499810 | 1.1:-5633535 | MS.gene32973:CDS |
TCGAAATCAGCGGTGGCGGG+AGG | 0.502438 | 1.1:+5638928 | None:intergenic |
TACCATCAGCAGAATATGCT+GGG | 0.503201 | 1.1:+5632752 | None:intergenic |
CCACCAACTATGGATCAAAA+GGG | 0.503822 | 1.1:-5633224 | MS.gene32973:CDS |
CCTCAGCAACAGCAGAATCC+TGG | 0.504044 | 1.1:-5633459 | MS.gene32973:CDS |
AATAATCATAGGTAGACTGC+TGG | 0.504119 | 1.1:+5633493 | None:intergenic |
GGCACATTGTACTGGGAAGT+TGG | 0.504619 | 1.1:+5633594 | None:intergenic |
CGGTCAACCTGGTTATGGTC+AGG | 0.506940 | 1.1:-5632812 | MS.gene32973:CDS |
CTGTTGATTATAATAATCAT+AGG | 0.509838 | 1.1:+5633482 | None:intergenic |
TTGTACTGGGAAGTTGGACC+AGG | 0.509939 | 1.1:+5633600 | None:intergenic |
AGCCAACCTCAAACACAGTC+TGG | 0.515940 | 1.1:-5633054 | MS.gene32973:CDS |
TAGAATATCCACCAGCTGAG+TGG | 0.517553 | 1.1:+5633544 | None:intergenic |
TCACAGTCACCTAATGCTGC+TGG | 0.518137 | 1.1:-5632976 | MS.gene32973:CDS |
AGTTCGAAATCAGCGGTGGC+GGG | 0.519442 | 1.1:+5638925 | None:intergenic |
ACCGGGGCAGGTATATTCTC+AGG | 0.519963 | 1.1:-5633367 | MS.gene32973:CDS |
GACTGTGATTGTCCGTATGC+AGG | 0.520554 | 1.1:+5632991 | None:intergenic |
CCAGGATTCTGCTGTTGCTG+AGG | 0.520990 | 1.1:+5633459 | None:intergenic |
TTGTAAGCAGTCCCATCAGC+TGG | 0.522053 | 1.1:+5633423 | None:intergenic |
TTCAGTGGATGTGTCGCCTG+GGG | 0.528218 | 1.1:+5636847 | None:intergenic |
TGCAGATTCAATTTGTTCAG+AGG | 0.529509 | 1.1:+5636802 | None:intergenic |
TCCTGAGAATATACCTGCCC+CGG | 0.531982 | 1.1:+5633366 | None:intergenic |
CCTCCTCACTCACGAACCAC+CGG | 0.532065 | 1.1:-5638994 | MS.gene32973:CDS |
GTTGGACCAGGGTATGCTCC+AGG | 0.533306 | 1.1:+5633612 | None:intergenic |
ATGGCTCAGCCCCAAGCTAT+GGG | 0.534329 | 1.1:-5633269 | MS.gene32973:CDS |
CCAGGTTGTTGAGAAGCGGC+AGG | 0.535004 | 1.1:+5633651 | None:intergenic |
GAATACGAAGGTATACTCAT+AGG | 0.536049 | 1.1:+5638131 | None:intergenic |
GGATATTCCCAACCAGAAGC+AGG | 0.537520 | 1.1:-5632907 | MS.gene32973:CDS |
AGTGGTACTCCGCCTGCATA+CGG | 0.538474 | 1.1:-5633003 | MS.gene32973:CDS |
TTACCATCAGCAGAATATGC+TGG | 0.541168 | 1.1:+5632751 | None:intergenic |
CTTAGAAATCCATCAATGTC+CGG | 0.541667 | 1.1:-5633726 | MS.gene32973:CDS |
GGCTGAGCAGCCCCTTGTGG+TGG | 0.542062 | 1.1:+5633117 | None:intergenic |
GGCTGGGAAGGAGGATACCC+AGG | 0.542313 | 1.1:+5632940 | None:intergenic |
GGTTATGGCTATGCACAGCC+TGG | 0.542437 | 1.1:-5633630 | MS.gene32973:CDS |
ATACCTTCGTATTCGCATCA+AGG | 0.542939 | 1.1:-5638122 | MS.gene32973:CDS |
TAACCAGGTTGACCGCCTGC+AGG | 0.543015 | 1.1:+5632820 | None:intergenic |
GCTGGAGGTGCAGGACCACC+AGG | 0.543305 | 1.1:+5633441 | None:intergenic |
GTGCCTCAGCAAGCTTATGC+AGG | 0.543329 | 1.1:-5633576 | MS.gene32973:CDS |
AAGCTATGGGTCAGCTCAAG+AGG | 0.543556 | 1.1:-5633256 | MS.gene32973:CDS |
GTTGGTCTTATAATCGGTAA+AGG | 0.545344 | 1.1:-5637161 | MS.gene32973:CDS |
TATGCTGCTTGGGAGGTTGG+CGG | 0.549360 | 1.1:+5633081 | None:intergenic |
AGGTTGTTGAGAAGCGGCAG+GGG | 0.550505 | 1.1:+5633653 | None:intergenic |
CCTTGTTGTGAAGGTTGGAC+AGG | 0.552316 | 1.1:+5633183 | None:intergenic |
TTGCTGAGGCACATTGTACT+GGG | 0.553886 | 1.1:+5633587 | None:intergenic |
TACTCGACGAATGACTGGAC+AGG | 0.554297 | 1.1:-5637331 | MS.gene32973:CDS |
AGACTGCTGGGCAGTTGCAG+TGG | 0.556554 | 1.1:+5633506 | None:intergenic |
CATGAAGATTCCAAATAACA+AGG | 0.558461 | 1.1:-5637289 | MS.gene32973:intron |
GTATATTCTCAGGATGGCTA+TGG | 0.559901 | 1.1:-5633357 | MS.gene32973:CDS |
CTACCATAACCTTGTTGTGA+AGG | 0.561165 | 1.1:+5633174 | None:intergenic |
CTGAGGATAACCAGCACCAT+AGG | 0.562921 | 1.1:+5632777 | None:intergenic |
TAGGATCAGCATCCATATCA+CGG | 0.563712 | 1.1:+5637988 | None:intergenic |
GAAATCCCTAATGGAAGGGT+TGG | 0.564633 | 1.1:-5638083 | MS.gene32973:CDS |
CACTGACCTGATGAATCGTA+AGG | 0.565644 | 1.1:+5638799 | None:intergenic |
AAACCGGTGGTTCGTGAGTG+AGG | 0.566199 | 1.1:+5638991 | None:intergenic |
GGGACGTTGTTGTAAGAAGG+AGG | 0.568413 | 1.1:+5638952 | None:intergenic |
CAGGTTGTTGAGAAGCGGCA+GGG | 0.569198 | 1.1:+5633652 | None:intergenic |
GCCCCAGCATATTCTGCTGA+TGG | 0.569348 | 1.1:-5632754 | MS.gene32973:CDS |
TACAATCAACCACCATCCGC+TGG | 0.570184 | 1.1:-5633399 | MS.gene32973:CDS |
AGAAGGAGGAGGAGGTCCGT+CGG | 0.571000 | 1.1:+5638966 | None:intergenic |
GTGGTTCGTGAGTGAGGAGG+TGG | 0.571087 | 1.1:+5638997 | None:intergenic |
GTCCGTTTGACGACATCAGA+GGG | 0.572785 | 1.1:+5638847 | None:intergenic |
GGCTGTGCATAGCCATAACC+AGG | 0.572820 | 1.1:+5633633 | None:intergenic |
CCCCGGTTGGTTATAACCAG+CGG | 0.574388 | 1.1:+5633383 | None:intergenic |
GTTGGCGGTACCCCATAACT+TGG | 0.574628 | 1.1:+5633096 | None:intergenic |
CGAACCACCGGTTTCTCCGA+CGG | 0.574726 | 1.1:-5638982 | MS.gene32973:CDS |
TATCCTCCCCACTCAGCTGG+TGG | 0.575900 | 1.1:-5633552 | MS.gene32973:CDS |
TCCATCATAGCTACCACCAC+GGG | 0.578817 | 1.1:+5632714 | None:intergenic |
TGGTTATAACCAGCGGATGG+TGG | 0.581931 | 1.1:+5633390 | None:intergenic |
GCAGAATATGCTGGGGCCTG+AGG | 0.582180 | 1.1:+5632760 | None:intergenic |
TCCGCTGGTTATAACCAACC+GGG | 0.583200 | 1.1:-5633384 | MS.gene32973:CDS |
TACCTTCGTATTCGCATCAA+GGG | 0.584599 | 1.1:-5638121 | MS.gene32973:CDS |
TACTTGCGTTTCAGGGAAGG+TGG | 0.584666 | 1.1:+5639030 | None:intergenic |
TTGAGCTGACCCATAGCTTG+GGG | 0.586253 | 1.1:+5633260 | None:intergenic |
CCTGTCCAACCTTCACAACA+AGG | 0.586296 | 1.1:-5633183 | MS.gene32973:CDS |
AGGTTGGACAGGTGGAACTT+GGG | 0.587507 | 1.1:+5633194 | None:intergenic |
GCTGCCATATGCTGCTTGGG+AGG | 0.588178 | 1.1:+5633074 | None:intergenic |
AGGATCAGCATCCATATCAC+GGG | 0.589305 | 1.1:+5637989 | None:intergenic |
AGATTGAAATCCCTAATGGA+AGG | 0.590386 | 1.1:-5638088 | MS.gene32973:CDS |
CTTGGCTGAGCAGCCCCTTG+TGG | 0.595602 | 1.1:+5633114 | None:intergenic |
GGCTGAGCATACCCTGATTG+TGG | 0.596057 | 1.1:+5633318 | None:intergenic |
TGGGAATATCCAGAAGGAGG+GGG | 0.597039 | 1.1:+5632919 | None:intergenic |
TATGACGGAGGACCATATGA+TGG | 0.597938 | 1.1:+5632850 | None:intergenic |
GAGAATATACCTGCCCCGGT+TGG | 0.599934 | 1.1:+5633370 | None:intergenic |
TATGCAGGCGGAGTACCACT+TGG | 0.600643 | 1.1:+5633006 | None:intergenic |
CCTGCAGGAGCACCATATGA+CGG | 0.602443 | 1.1:+5632835 | None:intergenic |
TTGTTGTAAGAAGGAGGAGG+AGG | 0.606553 | 1.1:+5638958 | None:intergenic |
AACCAGACTGTGTTTGAGGT+TGG | 0.607137 | 1.1:+5633052 | None:intergenic |
CCTGATGAATCGTAAGGGGA+AGG | 0.609958 | 1.1:+5638805 | None:intergenic |
GGTCCGTTTGACGACATCAG+AGG | 0.610197 | 1.1:+5638846 | None:intergenic |
ATCAACAACCACCACAATCA+GGG | 0.610790 | 1.1:-5633329 | MS.gene32973:CDS |
ATAATCATAGGTAGACTGCT+GGG | 0.611439 | 1.1:+5633494 | None:intergenic |
GATTGAAATCCCTAATGGAA+GGG | 0.612326 | 1.1:-5638087 | MS.gene32973:CDS |
TTTGATGAGTTCGAAATCAG+CGG | 0.613457 | 1.1:+5638918 | None:intergenic |
CTGGAGGTTATGGTCAACCT+GGG | 0.614290 | 1.1:-5632957 | MS.gene32973:CDS |
CCTGCCGCTTCTCAACAACC+TGG | 0.615048 | 1.1:-5633651 | MS.gene32973:CDS |
GTTGGGAATATCCAGAAGGA+GGG | 0.618770 | 1.1:+5632917 | None:intergenic |
AGGGAGCAGCGGCACCAGAG+AGG | 0.621571 | 1.1:+5638866 | None:intergenic |
TCATATGGTGCTCCTGCAGG+CGG | 0.623705 | 1.1:-5632832 | MS.gene32973:CDS |
TATGATGGAGCACCTGCACA+GGG | 0.625096 | 1.1:-5632700 | MS.gene32973:CDS |
TGTTGTGAAGGTTGGACAGG+TGG | 0.625828 | 1.1:+5633186 | None:intergenic |
TGCCAACTATCCACCACAAG+GGG | 0.627557 | 1.1:-5633127 | MS.gene32973:CDS |
GGCTGCTCAGCCAAGTTATG+GGG | 0.628058 | 1.1:-5633106 | MS.gene32973:CDS |
ACGTTGTTGTAAGAAGGAGG+AGG | 0.630187 | 1.1:+5638955 | None:intergenic |
ACTGACCTGATGAATCGTAA+GGG | 0.631319 | 1.1:+5638800 | None:intergenic |
ATAACCAGGTTGTTGAGAAG+CGG | 0.633923 | 1.1:+5633647 | None:intergenic |
GCACAGCCTGGAGCATACCC+TGG | 0.637236 | 1.1:-5633618 | MS.gene32973:CDS |
TCTGCTGATGGTAATGCAAG+TGG | 0.639056 | 1.1:-5632742 | MS.gene32973:CDS |
CATCAATGAAGTTCTTGCTG+AGG | 0.639266 | 1.1:-5637901 | MS.gene32973:intron |
GGTTGTTGAGAAGCGGCAGG+GGG | 0.640268 | 1.1:+5633654 | None:intergenic |
GATGAATCGTAAGGGGAAGG+AGG | 0.641309 | 1.1:+5638808 | None:intergenic |
CACCAACTATGGATCAAAAG+GGG | 0.641638 | 1.1:-5633223 | MS.gene32973:CDS |
GGTCTTATAATCGGTAAAGG+TGG | 0.641992 | 1.1:-5637158 | MS.gene32973:CDS |
GACGACATCAGAGGGAGCAG+CGG | 0.642009 | 1.1:+5638855 | None:intergenic |
GGTTGGGAATATCCAGAAGG+AGG | 0.643058 | 1.1:+5632916 | None:intergenic |
TCCGGTGGTTACTCTCAGCA+AGG | 0.644168 | 1.1:-5633708 | MS.gene32973:CDS |
CTGACCTGATGAATCGTAAG+GGG | 0.646597 | 1.1:+5638801 | None:intergenic |
GGTTATGGTCAGGCACCACA+TGG | 0.648967 | 1.1:-5632802 | MS.gene32973:CDS |
AGCTATGGGTCAGCTCAAGA+GGG | 0.656317 | 1.1:-5633255 | MS.gene32973:CDS |
AGGTCCGTCGGAGAAACCGG+TGG | 0.656677 | 1.1:+5638978 | None:intergenic |
TATCCACCAGCTGAGTGGGG+AGG | 0.656693 | 1.1:+5633549 | None:intergenic |
GATGAGTTCGAAATCAGCGG+TGG | 0.658474 | 1.1:+5638921 | None:intergenic |
GGCACCAGAGAGGAGACGAG+CGG | 0.659053 | 1.1:+5638876 | None:intergenic |
GGTTGGTTATAACCAGCGGA+TGG | 0.660203 | 1.1:+5633387 | None:intergenic |
TGATTCAATCCTCAGTGGCG+AGG | 0.661659 | 1.1:-5636768 | MS.gene32973:intron |
TCAGTGGATGTGTCGCCTGG+GGG | 0.664235 | 1.1:+5636848 | None:intergenic |
TAACCTGCATAAGCTTGCTG+AGG | 0.668745 | 1.1:+5633573 | None:intergenic |
TGAGCATACCCTGATTGTGG+TGG | 0.669029 | 1.1:+5633321 | None:intergenic |
GATGGAGGACCATAACCAGA+AGG | 0.670007 | 1.1:+5632868 | None:intergenic |
TAAGCAGTCCCATCAGCTGG+AGG | 0.671420 | 1.1:+5633426 | None:intergenic |
ACCTTGCTGAGAGTAACCAC+CGG | 0.672988 | 1.1:+5633707 | None:intergenic |
GGGCAGGTATATTCTCAGGA+TGG | 0.673213 | 1.1:-5633363 | MS.gene32973:CDS |
CTGCCAACTATCCACCACAA+GGG | 0.674671 | 1.1:-5633128 | MS.gene32973:CDS |
CTCCATCATAGCTACCACCA+CGG | 0.675902 | 1.1:+5632713 | None:intergenic |
GACCCTTGATGCGAATACGA+AGG | 0.677168 | 1.1:+5638119 | None:intergenic |
GACGGAGGACCATATGATGG+AGG | 0.678171 | 1.1:+5632853 | None:intergenic |
GAATATCCACCAGCTGAGTG+GGG | 0.679261 | 1.1:+5633546 | None:intergenic |
TCTGGTTGGGAATATCCAGA+AGG | 0.680022 | 1.1:+5632913 | None:intergenic |
CTGCTGATGGTAATGCAAGT+GGG | 0.680991 | 1.1:-5632741 | MS.gene32973:CDS |
ACTCGACGAATGACTGGACA+GGG | 0.681409 | 1.1:-5637330 | MS.gene32973:CDS |
AGAAATCCATCAATGTCCGG+TGG | 0.682404 | 1.1:-5633723 | MS.gene32973:CDS |
TTGGGAATATCCAGAAGGAG+GGG | 0.684340 | 1.1:+5632918 | None:intergenic |
TGTGATTGTCCGTATGCAGG+CGG | 0.684703 | 1.1:+5632994 | None:intergenic |
CAGTCACCTAATGCTGCTGG+AGG | 0.687355 | 1.1:-5632973 | MS.gene32973:CDS |
GGAGGACCATAACCAGAAGG+TGG | 0.687831 | 1.1:+5632871 | None:intergenic |
TGTGGTGCCTGACCATAACC+AGG | 0.688833 | 1.1:+5632805 | None:intergenic |
GCTGCCAACTATCCACCACA+AGG | 0.689795 | 1.1:-5633129 | MS.gene32973:CDS |
TTGGTTGATTCAATCCTCAG+TGG | 0.689871 | 1.1:-5636773 | MS.gene32973:CDS |
CCTCAAACTCAAAAGCCAAG+TGG | 0.690391 | 1.1:-5633021 | MS.gene32973:CDS |
ACCATCAGCAGAATATGCTG+GGG | 0.694973 | 1.1:+5632753 | None:intergenic |
CCGCTGGTTATAACCAACCG+GGG | 0.703478 | 1.1:-5633383 | MS.gene32973:CDS |
CAGCAACAGCAGAATCCTGG+TGG | 0.703625 | 1.1:-5633456 | MS.gene32973:CDS |
ATATTAGTACATCAGCTCTG+AGG | 0.707129 | 1.1:+5632649 | None:intergenic |
CCGGTGGTTCGTGAGTGAGG+AGG | 0.707715 | 1.1:+5638994 | None:intergenic |
AAACGGACCAAATTCGACAA+CGG | 0.710424 | 1.1:-5638832 | MS.gene32973:CDS |
AATGCAAGTGGGAATGCCCG+TGG | 0.712985 | 1.1:-5632730 | MS.gene32973:CDS |
TGTACTGGGAAGTTGGACCA+GGG | 0.721480 | 1.1:+5633601 | None:intergenic |
CGACGAATGACTGGACAGGG+TGG | 0.727236 | 1.1:-5637327 | MS.gene32973:CDS |
GCAGGAGCACCATATGACGG+AGG | 0.739248 | 1.1:+5632838 | None:intergenic |
CAAAACATACCTCGCCACTG+AGG | 0.741645 | 1.1:+5636759 | None:intergenic |
GCAAGTGGGAATGCCCGTGG+TGG | 0.753231 | 1.1:-5632727 | MS.gene32973:CDS |
CCAGCACCATAGGAACCATG+TGG | 0.763459 | 1.1:+5632787 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTGTTAATCTTATTATT+TGG | - | chr1.1:5633503-5633522 | MS.gene32973:CDS | 10.0% |
!! | ATATAAATAACACAATATTA+AGG | + | chr1.1:5637845-5637864 | None:intergenic | 10.0% |
!! | TATAAATAACACAATATTAA+GGG | + | chr1.1:5637844-5637863 | None:intergenic | 10.0% |
!! | AAAGAACATTAAAAATTGAA+GGG | - | chr1.1:5634894-5634913 | MS.gene32973:intron | 15.0% |
!! | ACCTAAAATTAAGTAAAATT+AGG | + | chr1.1:5632977-5632996 | None:intergenic | 15.0% |
!! | ACTTAATAATAATATATGGA+AGG | + | chr1.1:5636447-5636466 | None:intergenic | 15.0% |
!! | AGGAACTTAATAATAATATA+TGG | + | chr1.1:5636451-5636470 | None:intergenic | 15.0% |
!! | ATTTATGTAAATGTGATTTA+GGG | - | chr1.1:5635626-5635645 | MS.gene32973:intron | 15.0% |
!! | CTTAATAATAATATATGGAA+GGG | + | chr1.1:5636446-5636465 | None:intergenic | 15.0% |
!! | TAATCATTATTTATGTTAGA+TGG | - | chr1.1:5635109-5635128 | MS.gene32973:intron | 15.0% |
!! | TTATTATTGAAACAATTGTA+CGG | - | chr1.1:5636140-5636159 | MS.gene32973:intron | 15.0% |
!! | TTGTATGTGAATATTTAATT+TGG | - | chr1.1:5634094-5634113 | MS.gene32973:intron | 15.0% |
!!! | AAGATAATTTTGATAAACTT+AGG | + | chr1.1:5635772-5635791 | None:intergenic | 15.0% |
!!! | AATTTCGATTATTTGATAAT+TGG | - | chr1.1:5633535-5633554 | MS.gene32973:CDS | 15.0% |
!!! | AGAAAATTTAAAATCTCTTA+GGG | - | chr1.1:5633910-5633929 | MS.gene32973:intron | 15.0% |
!!! | GTATCATAGTTATATTATTT+TGG | - | chr1.1:5635740-5635759 | MS.gene32973:intron | 15.0% |
!!! | TAGAAAATTTAAAATCTCTT+AGG | - | chr1.1:5633909-5633928 | MS.gene32973:intron | 15.0% |
!!! | TCCTAATTTTACTTAATTTT+AGG | - | chr1.1:5632973-5632992 | MS.gene32973:CDS | 15.0% |
!! | AAAGAGTCTATAGATAAAAT+AGG | + | chr1.1:5633848-5633867 | None:intergenic | 20.0% |
!! | AAGAGTCTATAGATAAAATA+GGG | + | chr1.1:5633847-5633866 | None:intergenic | 20.0% |
!! | ACAATTCTATTGCAAAATAT+GGG | + | chr1.1:5637593-5637612 | None:intergenic | 20.0% |
!! | AGTTCATTTGTATTTATTTG+TGG | - | chr1.1:5637945-5637964 | MS.gene32973:CDS | 20.0% |
!! | ATATTGTATCTCAAAATACT+GGG | + | chr1.1:5637625-5637644 | None:intergenic | 20.0% |
!! | ATCACATTTACATAAATCAA+AGG | + | chr1.1:5635623-5635642 | None:intergenic | 20.0% |
!! | ATGTATTCATAGAATTGATT+CGG | - | chr1.1:5635875-5635894 | MS.gene32973:intron | 20.0% |
!! | ATTTCTGCTGTTAAATTATT+AGG | - | chr1.1:5637039-5637058 | MS.gene32973:intron | 20.0% |
!! | GAAAACAAGTTTGTAATAAA+AGG | + | chr1.1:5635466-5635485 | None:intergenic | 20.0% |
!! | GAAAGAACATTAAAAATTGA+AGG | - | chr1.1:5634893-5634912 | MS.gene32973:intron | 20.0% |
!! | GATTTATGTAAATGTGATTT+AGG | - | chr1.1:5635625-5635644 | MS.gene32973:intron | 20.0% |
!! | GTGGTTATTATTAATGTTAT+TGG | - | chr1.1:5634707-5634726 | MS.gene32973:intron | 20.0% |
!! | TAATTGAATTGTGATAAAAG+AGG | + | chr1.1:5632952-5632971 | None:intergenic | 20.0% |
!! | TACAATTCTATTGCAAAATA+TGG | + | chr1.1:5637594-5637613 | None:intergenic | 20.0% |
!! | TATATTGTATCTCAAAATAC+TGG | + | chr1.1:5637626-5637645 | None:intergenic | 20.0% |
!! | TGTGAACAACAATAATATAA+GGG | + | chr1.1:5634809-5634828 | None:intergenic | 20.0% |
!! | TTCATTGTTGGAAATATTTA+TGG | - | chr1.1:5636883-5636902 | MS.gene32973:intron | 20.0% |
!! | TTGTGAACAACAATAATATA+AGG | + | chr1.1:5634810-5634829 | None:intergenic | 20.0% |
!!! | AATTTTTAATGTTCTTTCAG+TGG | + | chr1.1:5634891-5634910 | None:intergenic | 20.0% |
!!! | AATTTTTCTTCTTTTTTGGT+TGG | - | chr1.1:5634513-5634532 | MS.gene32973:intron | 20.0% |
!!! | ACTCAATTTTTCTTCTTTTT+TGG | - | chr1.1:5634509-5634528 | MS.gene32973:intron | 20.0% |
!!! | AGTATGGATTTGAAATATAT+AGG | - | chr1.1:5634207-5634226 | MS.gene32973:intron | 20.0% |
!!! | ATTAACTCTAATATTTGTTG+CGG | - | chr1.1:5637177-5637196 | MS.gene32973:intron | 20.0% |
!!! | ATTTTGGAGTGATTTATATT+TGG | + | chr1.1:5633214-5633233 | None:intergenic | 20.0% |
!!! | CTGTTGATTATAATAATCAT+AGG | + | chr1.1:5638241-5638260 | None:intergenic | 20.0% |
!!! | TAGTTCTTACTAATTGATTT+GGG | - | chr1.1:5635434-5635453 | MS.gene32973:intron | 20.0% |
!!! | TCTTGACAATTTGTATATTT+TGG | - | chr1.1:5637474-5637493 | MS.gene32973:intron | 20.0% |
!!! | TGATTTTAATAGAGTCTATT+TGG | - | chr1.1:5633004-5633023 | MS.gene32973:CDS | 20.0% |
!!! | TTAATGAATCAGTTTCTTTT+GGG | - | chr1.1:5634318-5634337 | MS.gene32973:intron | 20.0% |
!!! | TTAGTTCTTACTAATTGATT+TGG | - | chr1.1:5635433-5635452 | MS.gene32973:intron | 20.0% |
!!! | TTATACGTACTTTTATTTGA+GGG | - | chr1.1:5637280-5637299 | MS.gene32973:intron | 20.0% |
!!! | TTTAATGAATCAGTTTCTTT+TGG | - | chr1.1:5634317-5634336 | MS.gene32973:intron | 20.0% |
!!! | TTTATACGTACTTTTATTTG+AGG | - | chr1.1:5637279-5637298 | MS.gene32973:intron | 20.0% |
! | AAACAATCATGGTTGAAAAA+AGG | + | chr1.1:5636471-5636490 | None:intergenic | 25.0% |
! | AACAAGCTTAATTATTGTGT+GGG | + | chr1.1:5635275-5635294 | None:intergenic | 25.0% |
! | AACTAAACAAGCTAAATGTA+GGG | + | chr1.1:5637539-5637558 | None:intergenic | 25.0% |
! | AAGACTCATTTGAATTAGTA+TGG | - | chr1.1:5634191-5634210 | MS.gene32973:intron | 25.0% |
! | AATTGAATCTGCAAAACAAT+TGG | - | chr1.1:5634928-5634947 | MS.gene32973:intron | 25.0% |
! | ACTAATCTATTTGGAGAATT+AGG | + | chr1.1:5633754-5633773 | None:intergenic | 25.0% |
! | ATAAATCATCATCATTGTTG+TGG | - | chr1.1:5634688-5634707 | MS.gene32973:intron | 25.0% |
! | ATGATAAAAATTACGAGAAG+AGG | + | chr1.1:5637159-5637178 | None:intergenic | 25.0% |
! | CAATTCTATTGCAAAATATG+GGG | + | chr1.1:5637592-5637611 | None:intergenic | 25.0% |
! | CTTAAAACTCAATTCTTTCT+TGG | - | chr1.1:5635247-5635266 | MS.gene32973:intron | 25.0% |
! | GTATAGACTAAGTATATGTT+CGG | + | chr1.1:5633475-5633494 | None:intergenic | 25.0% |
! | GTTTGTTCTCTTAGATTATT+GGG | - | chr1.1:5637391-5637410 | MS.gene32973:intron | 25.0% |
! | TAACTAAACAAGCTAAATGT+AGG | + | chr1.1:5637540-5637559 | None:intergenic | 25.0% |
! | TACATTATCAGATACCATAT+GGG | + | chr1.1:5637816-5637835 | None:intergenic | 25.0% |
! | TAGATTATTGGGTGATATTT+GGG | - | chr1.1:5637402-5637421 | MS.gene32973:intron | 25.0% |
! | TAGTTTAACAACTACAAAAC+AGG | + | chr1.1:5637005-5637024 | None:intergenic | 25.0% |
! | TATAATTCCTATGAGTATCT+AGG | + | chr1.1:5636083-5636102 | None:intergenic | 25.0% |
! | TATCTTACCATCTAAACATT+TGG | + | chr1.1:5635507-5635526 | None:intergenic | 25.0% |
! | TATTATGCCAAATACAAGTT+GGG | + | chr1.1:5636389-5636408 | None:intergenic | 25.0% |
! | TGTATGTAATACTACATCTT+GGG | - | chr1.1:5637920-5637939 | MS.gene32973:CDS | 25.0% |
! | TTAAAATTATGCAGTATACG+AGG | + | chr1.1:5636419-5636438 | None:intergenic | 25.0% |
! | TTACATTATCAGATACCATA+TGG | + | chr1.1:5637817-5637836 | None:intergenic | 25.0% |
! | TTAGATTATTGGGTGATATT+TGG | - | chr1.1:5637401-5637420 | MS.gene32973:intron | 25.0% |
! | TTTATGTCTATGTCTATAGA+TGG | - | chr1.1:5636320-5636339 | MS.gene32973:intron | 25.0% |
! | TTTCTATTTACTTGTAGCAA+AGG | - | chr1.1:5637435-5637454 | MS.gene32973:intron | 25.0% |
!! | AGTTTGTTCTCTTAGATTAT+TGG | - | chr1.1:5637390-5637409 | MS.gene32973:intron | 25.0% |
!! | ATAATTGACTTTGACATGTT+TGG | - | chr1.1:5633249-5633268 | MS.gene32973:CDS | 25.0% |
!! | ATTGTTAGCTTAAACAATCA+TGG | + | chr1.1:5636482-5636501 | None:intergenic | 25.0% |
!! | TAAGATCACGATTTTTACTT+TGG | - | chr1.1:5635349-5635368 | MS.gene32973:intron | 25.0% |
!! | TATACCTCTACAATCAATTT+TGG | + | chr1.1:5633230-5633249 | None:intergenic | 25.0% |
!! | TGATTCTAGAAAGTAGAAAT+TGG | - | chr1.1:5633314-5633333 | MS.gene32973:CDS | 25.0% |
!! | TGTATTCATAGAATTGATTC+GGG | - | chr1.1:5635876-5635895 | MS.gene32973:intron | 25.0% |
!! | TTAGTTGTTAAGCATTTTAG+TGG | - | chr1.1:5637084-5637103 | MS.gene32973:intron | 25.0% |
!!! | AGTTCTTACTAATTGATTTG+GGG | - | chr1.1:5635435-5635454 | MS.gene32973:intron | 25.0% |
!!! | ATTGTACGGTTAGTTTATAT+TGG | - | chr1.1:5636154-5636173 | MS.gene32973:intron | 25.0% |
!!! | ATTTGTATATTTTGGAGTCA+TGG | - | chr1.1:5637482-5637501 | MS.gene32973:intron | 25.0% |
!!! | ATTTGTGTTGTGTTTTTAAC+AGG | - | chr1.1:5634341-5634360 | MS.gene32973:intron | 25.0% |
!!! | TGTACTGATTAATTCATTGT+TGG | - | chr1.1:5636871-5636890 | MS.gene32973:intron | 25.0% |
AAATCCAACAGTAAAGCATA+GGG | + | chr1.1:5634989-5635008 | None:intergenic | 30.0% | |
AACAAAACAAAATGAAGGCA+TGG | + | chr1.1:5634649-5634668 | None:intergenic | 30.0% | |
AAGAAGATTGAAATCCCTAA+TGG | - | chr1.1:5633628-5633647 | MS.gene32973:CDS | 30.0% | |
AAGATTCCAAATAACAAGGT+GGG | - | chr1.1:5634435-5634454 | MS.gene32973:intron | 30.0% | |
AGATACAGACAATAACTACA+AGG | + | chr1.1:5635086-5635105 | None:intergenic | 30.0% | |
AGATTATTGGGTGATATTTG+GGG | - | chr1.1:5637403-5637422 | MS.gene32973:intron | 30.0% | |
AGCACAACAAAACAAAATGA+AGG | + | chr1.1:5634654-5634673 | None:intergenic | 30.0% | |
ATACCATATGGGATTAGAAA+GGG | + | chr1.1:5637805-5637824 | None:intergenic | 30.0% | |
ATATGATATTCATTGCCTCA+AGG | + | chr1.1:5637657-5637676 | None:intergenic | 30.0% | |
CAATATAGTGTATTTCCTTG+AGG | - | chr1.1:5637639-5637658 | MS.gene32973:intron | 30.0% | |
CATGAAGATTCCAAATAACA+AGG | - | chr1.1:5634431-5634450 | MS.gene32973:intron | 30.0% | |
CTATTATGCCAAATACAAGT+TGG | + | chr1.1:5636390-5636409 | None:intergenic | 30.0% | |
CTGTATGTAATACTACATCT+TGG | - | chr1.1:5637919-5637938 | MS.gene32973:CDS | 30.0% | |
GAACAAGCTTAATTATTGTG+TGG | + | chr1.1:5635276-5635295 | None:intergenic | 30.0% | |
GCAACTAAAATTGAGTATAG+AGG | - | chr1.1:5633060-5633079 | MS.gene32973:CDS | 30.0% | |
GTAAGCTCAACTAATCTATT+TGG | + | chr1.1:5633763-5633782 | None:intergenic | 30.0% | |
GTTTGTTCTCCTAGATTATT+GGG | - | chr1.1:5637313-5637332 | MS.gene32973:CDS | 30.0% | |
TAGATTATTGGGTGAAGTTT+GGG | - | chr1.1:5637324-5637343 | MS.gene32973:CDS | 30.0% | |
TTGTACTTGTATGTTCTTTC+AGG | - | chr1.1:5634832-5634851 | MS.gene32973:intron | 30.0% | |
! | AATAGATTAGTTGAGCTTAC+TGG | - | chr1.1:5633763-5633782 | MS.gene32973:intron | 30.0% |
! | AGAATTGATTCTGACATGTT+TGG | - | chr1.1:5633086-5633105 | MS.gene32973:CDS | 30.0% |
! | AGTTTGTTCTCCTAGATTAT+TGG | - | chr1.1:5637312-5637331 | MS.gene32973:CDS | 30.0% |
! | CACAATAATTAAGCTTGTTC+AGG | - | chr1.1:5635276-5635295 | MS.gene32973:intron | 30.0% |
! | TTGGCGTAAAAGTTTTTGAT+AGG | - | chr1.1:5634113-5634132 | MS.gene32973:intron | 30.0% |
!! | CTTGTTATTTGGAATCTTCA+TGG | + | chr1.1:5634433-5634452 | None:intergenic | 30.0% |
!! | GTTGGTGTTATTATTGGAAA+AGG | - | chr1.1:5633655-5633674 | MS.gene32973:CDS | 30.0% |
!! | TGTGTTGATTAGTTCATTGT+GGG | - | chr1.1:5636542-5636561 | MS.gene32973:intron | 30.0% |
!! | TTGTGTTGATTAGTTCATTG+TGG | - | chr1.1:5636541-5636560 | MS.gene32973:intron | 30.0% |
!!! | TTCTTCTTTTTTGGTTGGAA+TGG | - | chr1.1:5634518-5634537 | MS.gene32973:intron | 30.0% |
AAGTATCTTCAGTTGCAATC+TGG | - | chr1.1:5633691-5633710 | MS.gene32973:CDS | 35.0% | |
AATAATCATAGGTAGACTGC+TGG | + | chr1.1:5638230-5638249 | None:intergenic | 35.0% | |
AATCAAGGGATAAAGACAAG+TGG | + | chr1.1:5637235-5637254 | None:intergenic | 35.0% | |
AATTATAGCCTGTTCAACAG+TGG | - | chr1.1:5636096-5636115 | MS.gene32973:intron | 35.0% | |
ACAACTACAAAACAGGATGT+TGG | + | chr1.1:5636998-5637017 | None:intergenic | 35.0% | |
AGATTATTGGGTGAAGTTTG+GGG | - | chr1.1:5637325-5637344 | MS.gene32973:CDS | 35.0% | |
AGATTGAAATCCCTAATGGA+AGG | - | chr1.1:5633632-5633651 | MS.gene32973:CDS | 35.0% | |
AGCAAAACAAGCTATAACCA+AGG | + | chr1.1:5635014-5635033 | None:intergenic | 35.0% | |
AGCAATATGAGAGGAAATCA+AGG | + | chr1.1:5637250-5637269 | None:intergenic | 35.0% | |
AGCTTAGCCAAATGTTTAGA+TGG | - | chr1.1:5635497-5635516 | MS.gene32973:intron | 35.0% | |
ATAATCATAGGTAGACTGCT+GGG | + | chr1.1:5638229-5638248 | None:intergenic | 35.0% | |
ATGTACGTACTTCTATCTGA+TGG | - | chr1.1:5637358-5637377 | MS.gene32973:CDS | 35.0% | |
ATTCATTTCGAATAGGGAGA+GGG | - | chr1.1:5637717-5637736 | MS.gene32973:intron | 35.0% | |
ATTCTCTTATGATTGCTGGA+TGG | - | chr1.1:5635208-5635227 | MS.gene32973:intron | 35.0% | |
ATTTCCTCTCATATTGCTGT+TGG | - | chr1.1:5637252-5637271 | MS.gene32973:intron | 35.0% | |
CAAACTTCACCCAATAATCT+AGG | + | chr1.1:5637325-5637344 | None:intergenic | 35.0% | |
CAAATCCAACAGTAAAGCAT+AGG | + | chr1.1:5634990-5635009 | None:intergenic | 35.0% | |
CACTCCAAAATTGATTGTAG+AGG | - | chr1.1:5633223-5633242 | MS.gene32973:CDS | 35.0% | |
CTAGATTATTGGGTGAAGTT+TGG | - | chr1.1:5637323-5637342 | MS.gene32973:CDS | 35.0% | |
CTATGCTTTACTGTTGGATT+TGG | - | chr1.1:5634988-5635007 | MS.gene32973:intron | 35.0% | |
CTGAAAAATGGCAGTCAAAA+CGG | + | chr1.1:5636358-5636377 | None:intergenic | 35.0% | |
CTTAGAAATCCATCAATGTC+CGG | - | chr1.1:5637994-5638013 | MS.gene32973:CDS | 35.0% | |
GAAGATTCCAAATAACAAGG+TGG | - | chr1.1:5634434-5634453 | MS.gene32973:intron | 35.0% | |
GATAAGTAGCCATTTCTTCA+TGG | - | chr1.1:5635523-5635542 | MS.gene32973:intron | 35.0% | |
GATACCATATGGGATTAGAA+AGG | + | chr1.1:5637806-5637825 | None:intergenic | 35.0% | |
GATTGAAATCCCTAATGGAA+GGG | - | chr1.1:5633633-5633652 | MS.gene32973:CDS | 35.0% | |
GCAATATGAGAGGAAATCAA+GGG | + | chr1.1:5637249-5637268 | None:intergenic | 35.0% | |
GGATGTTGGAATAAGAGTTT+CGG | + | chr1.1:5636984-5637003 | None:intergenic | 35.0% | |
GTACCCATTCATTTCGAATA+GGG | - | chr1.1:5637711-5637730 | MS.gene32973:intron | 35.0% | |
GTGTAAGAAACACCAACAAA+GGG | + | chr1.1:5636205-5636224 | None:intergenic | 35.0% | |
GTGTAGATGTGATCATTGTA+TGG | - | chr1.1:5634281-5634300 | MS.gene32973:intron | 35.0% | |
GTTAGTCATGAAGTAAATCC+AGG | + | chr1.1:5636808-5636827 | None:intergenic | 35.0% | |
GTTTCGGAATAAAAAGCTTC+AGG | + | chr1.1:5636968-5636987 | None:intergenic | 35.0% | |
TAAACCAACAGCAATATGAG+AGG | + | chr1.1:5637259-5637278 | None:intergenic | 35.0% | |
TAATAAGACCACTGTTGAAC+AGG | + | chr1.1:5636107-5636126 | None:intergenic | 35.0% | |
TACCATATGGGATTAGAAAG+GGG | + | chr1.1:5637804-5637823 | None:intergenic | 35.0% | |
TATGATCAGCAGCAAATCTA+TGG | - | chr1.1:5638432-5638451 | MS.gene32973:intron | 35.0% | |
TCATATGCTGGAGTTATGTT+TGG | - | chr1.1:5636605-5636624 | MS.gene32973:intron | 35.0% | |
TCGAAATGAATGGGTACAAA+AGG | + | chr1.1:5637708-5637727 | None:intergenic | 35.0% | |
TCTAAGAGAACAAACTTGAC+TGG | + | chr1.1:5637386-5637405 | None:intergenic | 35.0% | |
TCTCCCTATTCGAAATGAAT+GGG | + | chr1.1:5637717-5637736 | None:intergenic | 35.0% | |
TCTGATACCCAACTTGTATT+TGG | - | chr1.1:5636379-5636398 | MS.gene32973:intron | 35.0% | |
TGCTATTCTCTTATGATTGC+TGG | - | chr1.1:5635204-5635223 | MS.gene32973:intron | 35.0% | |
TGCTATTGTTCATGCATTGA+AGG | - | chr1.1:5635321-5635340 | MS.gene32973:intron | 35.0% | |
TGTACCCATTCATTTCGAAT+AGG | - | chr1.1:5637710-5637729 | MS.gene32973:intron | 35.0% | |
TGTGTAAGAAACACCAACAA+AGG | + | chr1.1:5636206-5636225 | None:intergenic | 35.0% | |
TTAGATTCATAGGGATGTCT+GGG | - | chr1.1:5636041-5636060 | MS.gene32973:intron | 35.0% | |
TTATGCAGTATACGAGGTTA+AGG | + | chr1.1:5636413-5636432 | None:intergenic | 35.0% | |
TTCTCTTATGATTGCTGGAT+GGG | - | chr1.1:5635209-5635228 | MS.gene32973:intron | 35.0% | |
TTGCAAAATATGGGGTGATA+TGG | + | chr1.1:5637584-5637603 | None:intergenic | 35.0% | |
TTTAGATTCATAGGGATGTC+TGG | - | chr1.1:5636040-5636059 | MS.gene32973:intron | 35.0% | |
TTTGATGAGTTCGAAATCAG+CGG | + | chr1.1:5632805-5632824 | None:intergenic | 35.0% | |
! | AACAAAGCACCATAACAAGA+AGG | + | chr1.1:5637123-5637142 | None:intergenic | 35.0% |
! | ATGTTGCGCTTTAGATTCAT+AGG | - | chr1.1:5636031-5636050 | MS.gene32973:intron | 35.0% |
! | CTGAATCTCTTATTTCAACC+TGG | - | chr1.1:5636787-5636806 | MS.gene32973:CDS | 35.0% |
! | CTGAGCATCAAGTCTTATAT+TGG | - | chr1.1:5636264-5636283 | MS.gene32973:intron | 35.0% |
! | GAATACGAAGGTATACTCAT+AGG | + | chr1.1:5633592-5633611 | None:intergenic | 35.0% |
! | GCATCAAGTCTTATATTGGT+CGG | - | chr1.1:5636268-5636287 | MS.gene32973:intron | 35.0% |
! | GTGTTTTGTACATTACTCCT+AGG | + | chr1.1:5634461-5634480 | None:intergenic | 35.0% |
! | TGCAGATTCAATTTGTTCAG+AGG | + | chr1.1:5634921-5634940 | None:intergenic | 35.0% |
! | TGGTGGATATTCTACCAATT+GGG | - | chr1.1:5638185-5638204 | MS.gene32973:intron | 35.0% |
! | TGTTGCGCTTTAGATTCATA+GGG | - | chr1.1:5636032-5636051 | MS.gene32973:intron | 35.0% |
! | TTCCATGTTAGTGTCACTAA+TGG | + | chr1.1:5636181-5636200 | None:intergenic | 35.0% |
! | TTTTATGCTGGAGCTATGTT+TGG | - | chr1.1:5636934-5636953 | MS.gene32973:intron | 35.0% |
!! | ATTCATAGAATTGATTCGGG+AGG | - | chr1.1:5635879-5635898 | MS.gene32973:intron | 35.0% |
!! | CTACAGGTTGGTCTTATAAT+CGG | - | chr1.1:5634553-5634572 | MS.gene32973:intron | 35.0% |
!! | GGTGTTATTATTGGAAAAGG+TGG | - | chr1.1:5633658-5633677 | MS.gene32973:CDS | 35.0% |
!! | GTACTTTTATTTGAGGGTTC+CGG | - | chr1.1:5637286-5637305 | MS.gene32973:intron | 35.0% |
!! | GTTGGTCTTATAATCGGTAA+AGG | - | chr1.1:5634559-5634578 | MS.gene32973:intron | 35.0% |
AAAAAGCCTGCGCAAAAGAT+TGG | + | chr1.1:5635981-5636000 | None:intergenic | 40.0% | |
AAACGGACCAAATTCGACAA+CGG | - | chr1.1:5632888-5632907 | MS.gene32973:CDS | 40.0% | |
AAGCACCATAACAAGAAGGT+AGG | + | chr1.1:5637119-5637138 | None:intergenic | 40.0% | |
AATCCAAGTTACCCGTGATA+TGG | - | chr1.1:5633720-5633739 | MS.gene32973:CDS | 40.0% | |
ACCACCAACTATGGATCAAA+AGG | - | chr1.1:5638495-5638514 | MS.gene32973:intron | 40.0% | |
ACTGACCTGATGAATCGTAA+GGG | + | chr1.1:5632923-5632942 | None:intergenic | 40.0% | |
ATAACACCAACCCTTCCATT+AGG | + | chr1.1:5633646-5633665 | None:intergenic | 40.0% | |
ATAACCAGGTTGTTGAGAAG+CGG | + | chr1.1:5638076-5638095 | None:intergenic | 40.0% | |
ATACCTTCGTATTCGCATCA+AGG | - | chr1.1:5633598-5633617 | MS.gene32973:CDS | 40.0% | |
ATCAACAACCACCACAATCA+GGG | - | chr1.1:5638391-5638410 | MS.gene32973:intron | 40.0% | |
CAACCTTCACAACAAGGTTA+TGG | - | chr1.1:5638543-5638562 | MS.gene32973:intron | 40.0% | |
CACCAACTATGGATCAAAAG+GGG | - | chr1.1:5638497-5638516 | MS.gene32973:intron | 40.0% | |
CATATAGACTGCATAAGCAG+CGG | + | chr1.1:5637511-5637530 | None:intergenic | 40.0% | |
CATATGCTTGTCTACTTCTG+TGG | - | chr1.1:5637672-5637691 | MS.gene32973:intron | 40.0% | |
CATCAATGAAGTTCTTGCTG+AGG | - | chr1.1:5633819-5633838 | MS.gene32973:intron | 40.0% | |
CATTCATTTCGAATAGGGAG+AGG | - | chr1.1:5637716-5637735 | MS.gene32973:intron | 40.0% | |
CCACCAACTATGGATCAAAA+GGG | - | chr1.1:5638496-5638515 | MS.gene32973:intron | 40.0% | |
CTAACATGGAATCCCTTTGT+TGG | - | chr1.1:5636190-5636209 | MS.gene32973:intron | 40.0% | |
CTCTCCCTATTCGAAATGAA+TGG | + | chr1.1:5637718-5637737 | None:intergenic | 40.0% | |
CTTCGAAGCAAAACTAGACT+TGG | + | chr1.1:5635046-5635065 | None:intergenic | 40.0% | |
GACCATTAGTGACACTAACA+TGG | - | chr1.1:5636176-5636195 | MS.gene32973:intron | 40.0% | |
GATTATTGGGTGAAGTTTGG+GGG | - | chr1.1:5637326-5637345 | MS.gene32973:CDS | 40.0% | |
GATTCAGAATGAAAAGCTGC+TGG | + | chr1.1:5636774-5636793 | None:intergenic | 40.0% | |
GGTGTTTCTTACACATGCAA+GGG | - | chr1.1:5636211-5636230 | MS.gene32973:intron | 40.0% | |
GTATATTCTCAGGATGGCTA+TGG | - | chr1.1:5638363-5638382 | MS.gene32973:intron | 40.0% | |
GTCACAACCTAGATACTCAT+AGG | - | chr1.1:5636073-5636092 | MS.gene32973:intron | 40.0% | |
TAACACCAACCCTTCCATTA+GGG | + | chr1.1:5633645-5633664 | None:intergenic | 40.0% | |
TAACTCCAGCATACAACAAG+AGG | + | chr1.1:5636736-5636755 | None:intergenic | 40.0% | |
TAACTCCAGCATATGACACA+AGG | + | chr1.1:5636601-5636620 | None:intergenic | 40.0% | |
TACAACTGGAGCAAGAATTC+AGG | - | chr1.1:5634609-5634628 | MS.gene32973:intron | 40.0% | |
TACCATCAGCAGAATATGCT+GGG | + | chr1.1:5638971-5638990 | None:intergenic | 40.0% | |
TACCCCTTTCTAATCCCATA+TGG | - | chr1.1:5637799-5637818 | MS.gene32973:intron | 40.0% | |
TACCTTCGTATTCGCATCAA+GGG | - | chr1.1:5633599-5633618 | MS.gene32973:CDS | 40.0% | |
TAGCCATTTCTTCATGGCTA+AGG | - | chr1.1:5635529-5635548 | MS.gene32973:intron | 40.0% | |
TAGGATCAGCATCCATATCA+CGG | + | chr1.1:5633735-5633754 | None:intergenic | 40.0% | |
TATCAACAACCACCACAATC+AGG | - | chr1.1:5638390-5638409 | MS.gene32973:intron | 40.0% | |
TATTGGGTGATATTTGGGGA+AGG | - | chr1.1:5637407-5637426 | MS.gene32973:intron | 40.0% | |
TCACTCCTACCTTCTTGTTA+TGG | - | chr1.1:5637111-5637130 | MS.gene32973:intron | 40.0% | |
TCTAGGAGAACAAACTTGAC+CGG | + | chr1.1:5637308-5637327 | None:intergenic | 40.0% | |
TCTTGACCTATGCAATCTGT+CGG | - | chr1.1:5635400-5635419 | MS.gene32973:intron | 40.0% | |
TGCTGCTGATCATATGATGT+TGG | + | chr1.1:5638426-5638445 | None:intergenic | 40.0% | |
TGGGTATCAGACCTGAAAAA+TGG | + | chr1.1:5636370-5636389 | None:intergenic | 40.0% | |
TGGTGTTTCTTACACATGCA+AGG | - | chr1.1:5636210-5636229 | MS.gene32973:intron | 40.0% | |
TGTACCCTATGCTTTACTGT+TGG | - | chr1.1:5634982-5635001 | MS.gene32973:intron | 40.0% | |
TTACCATCAGCAGAATATGC+TGG | + | chr1.1:5638972-5638991 | None:intergenic | 40.0% | |
TTCTTACACATGCAAGGGTA+TGG | - | chr1.1:5636216-5636235 | MS.gene32973:intron | 40.0% | |
TTTACTGTTGGATTTGGCCT+TGG | - | chr1.1:5634994-5635013 | MS.gene32973:intron | 40.0% | |
! | AAGAGTATGCAAGCTACAAC+TGG | - | chr1.1:5634595-5634614 | MS.gene32973:intron | 40.0% |
! | AATGAAGGCATGGCTTAAGA+AGG | + | chr1.1:5634639-5634658 | None:intergenic | 40.0% |
! | AATGACAATGTGTTTGCTGC+AGG | + | chr1.1:5636639-5636658 | None:intergenic | 40.0% |
! | ATCCCCTTTTGATCCATAGT+TGG | + | chr1.1:5638502-5638521 | None:intergenic | 40.0% |
! | ATGGTTTTTCCTGTGTCTAC+AGG | - | chr1.1:5634537-5634556 | MS.gene32973:intron | 40.0% |
! | CATAACCTTGTTGTGAAGGT+TGG | + | chr1.1:5638545-5638564 | None:intergenic | 40.0% |
! | CTACCATAACCTTGTTGTGA+AGG | + | chr1.1:5638549-5638568 | None:intergenic | 40.0% |
! | CTGGTGGATATTCTACCAAT+TGG | - | chr1.1:5638184-5638203 | MS.gene32973:intron | 40.0% |
! | GGGATTAGAAAGGGGTATAA+AGG | + | chr1.1:5637796-5637815 | None:intergenic | 40.0% |
! | GGTCTTATAATCGGTAAAGG+TGG | - | chr1.1:5634562-5634581 | MS.gene32973:intron | 40.0% |
! | TGTTGTGCGTTGAGTTCTTT+TGG | - | chr1.1:5634486-5634505 | MS.gene32973:intron | 40.0% |
! | TTGGTTGATTCAATCCTCAG+TGG | - | chr1.1:5634947-5634966 | MS.gene32973:intron | 40.0% |
! | TTTTTCCTGTGTCTACAGGT+TGG | - | chr1.1:5634541-5634560 | MS.gene32973:intron | 40.0% |
!! | AACTCAGTTTTGTCTCGATC+TGG | - | chr1.1:5637757-5637776 | MS.gene32973:intron | 40.0% |
!! | AGTTTTGTCTCGATCTGGTA+CGG | - | chr1.1:5637762-5637781 | MS.gene32973:intron | 40.0% |
!! | ATCCATAGTTGGTGGTAGTT+TGG | + | chr1.1:5638491-5638510 | None:intergenic | 40.0% |
!! | GGAAGGGTTGGTGTTATTAT+TGG | - | chr1.1:5633649-5633668 | MS.gene32973:CDS | 40.0% |
!! | TGTTTTTAACAGGCTGAGTC+TGG | - | chr1.1:5634351-5634370 | MS.gene32973:intron | 40.0% |
!!! | ACTTGGCTTTTGAGTTTGAG+GGG | + | chr1.1:5638700-5638719 | None:intergenic | 40.0% |
!!! | ATTGTGAGCTGGTTTTTGGA+GGG | - | chr1.1:5633937-5633956 | MS.gene32973:intron | 40.0% |
!!! | CACTTGGCTTTTGAGTTTGA+GGG | + | chr1.1:5638701-5638720 | None:intergenic | 40.0% |
!!! | CGTTTTGACTGCCATTTTTC+AGG | - | chr1.1:5636356-5636375 | MS.gene32973:intron | 40.0% |
!!! | TGTCATTGTGAGCTGGTTTT+TGG | - | chr1.1:5633933-5633952 | MS.gene32973:intron | 40.0% |
ACCATCAGCAGAATATGCTG+GGG | + | chr1.1:5638970-5638989 | None:intergenic | 45.0% | |
ACGAGAAGAGGCTATAAGAG+CGG | + | chr1.1:5637147-5637166 | None:intergenic | 45.0% | |
ACGCCTTAGCCATGAAGAAA+TGG | + | chr1.1:5635535-5635554 | None:intergenic | 45.0% | |
ACGTTGTTGTAAGAAGGAGG+AGG | + | chr1.1:5632768-5632787 | None:intergenic | 45.0% | |
AGAAATCCATCAATGTCCGG+TGG | - | chr1.1:5637997-5638016 | MS.gene32973:CDS | 45.0% | |
AGAATATCCACCAGCTGAGT+GGG | + | chr1.1:5638178-5638197 | None:intergenic | 45.0% | |
AGGATCAGCATCCATATCAC+GGG | + | chr1.1:5633734-5633753 | None:intergenic | 45.0% | |
AGTATCTAGGTTGTGACCAG+AGG | + | chr1.1:5636070-5636089 | None:intergenic | 45.0% | |
CACTGACCTGATGAATCGTA+AGG | + | chr1.1:5632924-5632943 | None:intergenic | 45.0% | |
CATCCATATCACGGGTAACT+TGG | + | chr1.1:5633726-5633745 | None:intergenic | 45.0% | |
CCATAACCAGACTGTGTTTG+AGG | + | chr1.1:5638675-5638694 | None:intergenic | 45.0% | |
CCTCAAACACAGTCTGGTTA+TGG | - | chr1.1:5638672-5638691 | MS.gene32973:intron | 45.0% | |
CCTCAAACTCAAAAGCCAAG+TGG | - | chr1.1:5638699-5638718 | MS.gene32973:intron | 45.0% | |
CTGACCTGATGAATCGTAAG+GGG | + | chr1.1:5632922-5632941 | None:intergenic | 45.0% | |
CTTCTCAGTCCTTGCTAACT+CGG | - | chr1.1:5635795-5635814 | MS.gene32973:intron | 45.0% | |
CTTGTTACTCGACGAATGAC+TGG | - | chr1.1:5634384-5634403 | MS.gene32973:intron | 45.0% | |
GAAATCCCTAATGGAAGGGT+TGG | - | chr1.1:5633637-5633656 | MS.gene32973:CDS | 45.0% | |
GACACAAAACCGAGTTAGCA+AGG | + | chr1.1:5635807-5635826 | None:intergenic | 45.0% | |
GCAAAACTAGACTTGGCACA+TGG | + | chr1.1:5635039-5635058 | None:intergenic | 45.0% | |
GCTTCTCAACAACCTGGTTA+TGG | - | chr1.1:5638075-5638094 | MS.gene32973:CDS | 45.0% | |
GGTTATGGTCCTCCATCATA+TGG | - | chr1.1:5638858-5638877 | MS.gene32973:CDS | 45.0% | |
GTGGATAGTTGGCAGCATTT+GGG | + | chr1.1:5638587-5638606 | None:intergenic | 45.0% | |
GTTGGGAATATCCAGAAGGA+GGG | + | chr1.1:5638806-5638825 | None:intergenic | 45.0% | |
GTTGTCCTTGTGTCATATGC+TGG | - | chr1.1:5636593-5636612 | MS.gene32973:intron | 45.0% | |
TAAGACCAACCTGTAGACAC+AGG | + | chr1.1:5634549-5634568 | None:intergenic | 45.0% | |
TAGAATATCCACCAGCTGAG+TGG | + | chr1.1:5638179-5638198 | None:intergenic | 45.0% | |
TAGCTCCAGCATAAAACACG+AGG | + | chr1.1:5636930-5636949 | None:intergenic | 45.0% | |
TCATATGGTCCTCCGTCATA+TGG | - | chr1.1:5638873-5638892 | MS.gene32973:CDS | 45.0% | |
TCTGGTTGGGAATATCCAGA+AGG | + | chr1.1:5638810-5638829 | None:intergenic | 45.0% | |
TTCGTCGTACTTGCGTTTCA+GGG | + | chr1.1:5632700-5632719 | None:intergenic | 45.0% | |
TTGCTGAGGCACATTGTACT+GGG | + | chr1.1:5638136-5638155 | None:intergenic | 45.0% | |
TTGGGAATATCCAGAAGGAG+GGG | + | chr1.1:5638805-5638824 | None:intergenic | 45.0% | |
TTGTTGTAAGAAGGAGGAGG+AGG | + | chr1.1:5632765-5632784 | None:intergenic | 45.0% | |
! | AACCAGACTGTGTTTGAGGT+TGG | + | chr1.1:5638671-5638690 | None:intergenic | 45.0% |
! | ATCCGCTGGTTATAACCAAC+CGG | - | chr1.1:5638335-5638354 | MS.gene32973:intron | 45.0% |
! | CCCTTTTGATCCATAGTTGG+TGG | + | chr1.1:5638499-5638518 | None:intergenic | 45.0% |
! | CTGCTGATGGTAATGCAAGT+GGG | - | chr1.1:5638979-5638998 | MS.gene32973:CDS | 45.0% |
! | GTGATACCAATCTTTTGCGC+AGG | - | chr1.1:5635972-5635991 | MS.gene32973:intron | 45.0% |
! | GTTGTCCTCGTGTTTTATGC+TGG | - | chr1.1:5636922-5636941 | MS.gene32973:intron | 45.0% |
! | GTTGTCCTCTTGTTGTATGC+TGG | - | chr1.1:5636728-5636747 | MS.gene32973:intron | 45.0% |
! | TATGACGGAGGACCATATGA+TGG | + | chr1.1:5638873-5638892 | None:intergenic | 45.0% |
! | TCTGCTGATGGTAATGCAAG+TGG | - | chr1.1:5638978-5638997 | MS.gene32973:CDS | 45.0% |
! | TTTTAACAGGCTGAGTCTGG+AGG | - | chr1.1:5634354-5634373 | MS.gene32973:intron | 45.0% |
!! | CTATGCAATCTGTCGGCTTT+CGG | - | chr1.1:5635407-5635426 | MS.gene32973:intron | 45.0% |
!! | TAACCTGCATAAGCTTGCTG+AGG | + | chr1.1:5638150-5638169 | None:intergenic | 45.0% |
!!! | AGCTGGTTTTTGGAGGGTTT+TGG | - | chr1.1:5633943-5633962 | MS.gene32973:intron | 45.0% |
!!! | CATTGTGAGCTGGTTTTTGG+AGG | - | chr1.1:5633936-5633955 | MS.gene32973:intron | 45.0% |
!!! | CCACTTGGCTTTTGAGTTTG+AGG | + | chr1.1:5638702-5638721 | None:intergenic | 45.0% |
!!! | CTTGGCTTTTGAGTTTGAGG+GGG | + | chr1.1:5638699-5638718 | None:intergenic | 45.0% |
!!! | TATTTTTTATTTGAAAATAT+AGG | - | chr1.1:5634240-5634259 | MS.gene32973:intron | 5.0% |
AAGCTATGGGTCAGCTCAAG+AGG | - | chr1.1:5638464-5638483 | MS.gene32973:intron | 50.0% | |
AAGGTTGGACAGGTGGAACT+TGG | + | chr1.1:5638530-5638549 | None:intergenic | 50.0% | |
ACCTTGCTGAGAGTAACCAC+CGG | + | chr1.1:5638016-5638035 | None:intergenic | 50.0% | |
ACTCGACGAATGACTGGACA+GGG | - | chr1.1:5634390-5634409 | MS.gene32973:intron | 50.0% | |
ACTTAGCCCTCCAAAGCTCT+TGG | + | chr1.1:5633971-5633990 | None:intergenic | 50.0% | |
AGCCAACCTCAAACACAGTC+TGG | - | chr1.1:5638666-5638685 | MS.gene32973:intron | 50.0% | |
AGCTATGGGTCAGCTCAAGA+GGG | - | chr1.1:5638465-5638484 | MS.gene32973:intron | 50.0% | |
AGGAGGACCGTTGTCGAATT+TGG | + | chr1.1:5632898-5632917 | None:intergenic | 50.0% | |
AGGTTGGACAGGTGGAACTT+GGG | + | chr1.1:5638529-5638548 | None:intergenic | 50.0% | |
ATTCCTCTTCATCTTCCCCC+AGG | - | chr1.1:5634857-5634876 | MS.gene32973:intron | 50.0% | |
CAAAACATACCTCGCCACTG+AGG | + | chr1.1:5634964-5634983 | None:intergenic | 50.0% | |
CCAAATAACAAGGTGGGCCT+AGG | - | chr1.1:5634441-5634460 | MS.gene32973:intron | 50.0% | |
CCATAACCTCCAGCAGCATT+AGG | + | chr1.1:5638756-5638775 | None:intergenic | 50.0% | |
CCTAATGCTGCTGGAGGTTA+TGG | - | chr1.1:5638753-5638772 | MS.gene32973:intron | 50.0% | |
CCTGATGAATCGTAAGGGGA+AGG | + | chr1.1:5632918-5632937 | None:intergenic | 50.0% | |
CCTGTCCAACCTTCACAACA+AGG | - | chr1.1:5638537-5638556 | MS.gene32973:intron | 50.0% | |
CCTTCCCCTTACGATTCATC+AGG | - | chr1.1:5632915-5632934 | MS.gene32973:CDS | 50.0% | |
CGAAAGCCGACAGATTGCAT+AGG | + | chr1.1:5635409-5635428 | None:intergenic | 50.0% | |
CTCAGCAAGGTTACCAAGCT+CGG | - | chr1.1:5638025-5638044 | MS.gene32973:CDS | 50.0% | |
CTCCATCATAGCTACCACCA+CGG | + | chr1.1:5639010-5639029 | None:intergenic | 50.0% | |
CTCCCTCTGATGTCGTCAAA+CGG | - | chr1.1:5632871-5632890 | MS.gene32973:CDS | 50.0% | |
CTCGATCTGGTACGGTATGT+TGG | - | chr1.1:5637770-5637789 | MS.gene32973:intron | 50.0% | |
CTGAGGATAACCAGCACCAT+AGG | + | chr1.1:5638946-5638965 | None:intergenic | 50.0% | |
CTGCCAACTATCCACCACAA+GGG | - | chr1.1:5638592-5638611 | MS.gene32973:intron | 50.0% | |
CTGGAGGTTATGGTCAACCT+GGG | - | chr1.1:5638763-5638782 | MS.gene32973:intron | 50.0% | |
CTTGAGCTGACCCATAGCTT+GGG | + | chr1.1:5638464-5638483 | None:intergenic | 50.0% | |
CTTGCTGAGGCACATTGTAC+TGG | + | chr1.1:5638137-5638156 | None:intergenic | 50.0% | |
GAATATCCACCAGCTGAGTG+GGG | + | chr1.1:5638177-5638196 | None:intergenic | 50.0% | |
GACCCTTGATGCGAATACGA+AGG | + | chr1.1:5633604-5633623 | None:intergenic | 50.0% | |
GACTGTGATTGTCCGTATGC+AGG | + | chr1.1:5638732-5638751 | None:intergenic | 50.0% | |
GAGTAACCACCGGACATTGA+TGG | + | chr1.1:5638006-5638025 | None:intergenic | 50.0% | |
GATGAATCGTAAGGGGAAGG+AGG | + | chr1.1:5632915-5632934 | None:intergenic | 50.0% | |
GATGAGTTCGAAATCAGCGG+TGG | + | chr1.1:5632802-5632821 | None:intergenic | 50.0% | |
GATGGAGGACCATAACCAGA+AGG | + | chr1.1:5638855-5638874 | None:intergenic | 50.0% | |
GGATATTCCCAACCAGAAGC+AGG | - | chr1.1:5638813-5638832 | MS.gene32973:CDS | 50.0% | |
GGCACATTGTACTGGGAAGT+TGG | + | chr1.1:5638129-5638148 | None:intergenic | 50.0% | |
GGCCAAACTACCACCAACTA+TGG | - | chr1.1:5638486-5638505 | MS.gene32973:intron | 50.0% | |
GGGACGTTGTTGTAAGAAGG+AGG | + | chr1.1:5632771-5632790 | None:intergenic | 50.0% | |
GGGCAGGTATATTCTCAGGA+TGG | - | chr1.1:5638357-5638376 | MS.gene32973:intron | 50.0% | |
GGTCGGTATGATGTCATCAC+TGG | - | chr1.1:5636285-5636304 | MS.gene32973:intron | 50.0% | |
GGTGGATAGTTGGCAGCATT+TGG | + | chr1.1:5638588-5638607 | None:intergenic | 50.0% | |
GGTTGGGAATATCCAGAAGG+AGG | + | chr1.1:5638807-5638826 | None:intergenic | 50.0% | |
GTCCGTTTGACGACATCAGA+GGG | + | chr1.1:5632876-5632895 | None:intergenic | 50.0% | |
GTTCGTCGTACTTGCGTTTC+AGG | + | chr1.1:5632701-5632720 | None:intergenic | 50.0% | |
TACAATCAACCACCATCCGC+TGG | - | chr1.1:5638321-5638340 | MS.gene32973:intron | 50.0% | |
TACTCGACGAATGACTGGAC+AGG | - | chr1.1:5634389-5634408 | MS.gene32973:intron | 50.0% | |
TACTTGCGTTTCAGGGAAGG+TGG | + | chr1.1:5632693-5632712 | None:intergenic | 50.0% | |
TAGTTGGCAGCATTTGGGCT+AGG | + | chr1.1:5638582-5638601 | None:intergenic | 50.0% | |
TATTGGGTGAAGTTTGGGGG+AGG | - | chr1.1:5637329-5637348 | MS.gene32973:CDS | 50.0% | |
TCACAGTCACCTAATGCTGC+TGG | - | chr1.1:5638744-5638763 | MS.gene32973:intron | 50.0% | |
TCCATCATAGCTACCACCAC+GGG | + | chr1.1:5639009-5639028 | None:intergenic | 50.0% | |
TCCTGAGAATATACCTGCCC+CGG | + | chr1.1:5638357-5638376 | None:intergenic | 50.0% | |
TCGTACTTGCGTTTCAGGGA+AGG | + | chr1.1:5632696-5632715 | None:intergenic | 50.0% | |
TCTTGAGCTGACCCATAGCT+TGG | + | chr1.1:5638465-5638484 | None:intergenic | 50.0% | |
TGAGCATACCCTGATTGTGG+TGG | + | chr1.1:5638402-5638421 | None:intergenic | 50.0% | |
TGATTCAATCCTCAGTGGCG+AGG | - | chr1.1:5634952-5634971 | MS.gene32973:intron | 50.0% | |
TGCCAACTATCCACCACAAG+GGG | - | chr1.1:5638593-5638612 | MS.gene32973:intron | 50.0% | |
TGGGAATATCCAGAAGGAGG+GGG | + | chr1.1:5638804-5638823 | None:intergenic | 50.0% | |
TGGTTATAACCAGCGGATGG+TGG | + | chr1.1:5638333-5638352 | None:intergenic | 50.0% | |
TGTACTGGGAAGTTGGACCA+GGG | + | chr1.1:5638122-5638141 | None:intergenic | 50.0% | |
TGTGATTGTCCGTATGCAGG+CGG | + | chr1.1:5638729-5638748 | None:intergenic | 50.0% | |
TGTTGTGAAGGTTGGACAGG+TGG | + | chr1.1:5638537-5638556 | None:intergenic | 50.0% | |
TTGAGCTGACCCATAGCTTG+GGG | + | chr1.1:5638463-5638482 | None:intergenic | 50.0% | |
TTGTAAGCAGTCCCATCAGC+TGG | + | chr1.1:5638300-5638319 | None:intergenic | 50.0% | |
TTGTACTGGGAAGTTGGACC+AGG | + | chr1.1:5638123-5638142 | None:intergenic | 50.0% | |
TTTCAGTGGATGTGTCGCCT+GGG | + | chr1.1:5634877-5634896 | None:intergenic | 50.0% | |
TTTGAGAGCCTGCTTCTGGT+TGG | + | chr1.1:5638824-5638843 | None:intergenic | 50.0% | |
! | AGAGCACCACCTTCTGGTTA+TGG | - | chr1.1:5638843-5638862 | MS.gene32973:CDS | 50.0% |
! | CCTTGTTGTGAAGGTTGGAC+AGG | + | chr1.1:5638540-5638559 | None:intergenic | 50.0% |
! | GGTTGGTTATAACCAGCGGA+TGG | + | chr1.1:5638336-5638355 | None:intergenic | 50.0% |
! | TATGATGGAGCACCTGCACA+GGG | - | chr1.1:5639020-5639039 | MS.gene32973:CDS | 50.0% |
! | TCCGCTGGTTATAACCAACC+GGG | - | chr1.1:5638336-5638355 | MS.gene32973:intron | 50.0% |
! | TTGAGAGCCTGCTTCTGGTT+GGG | + | chr1.1:5638823-5638842 | None:intergenic | 50.0% |
! | TTGGCTGCCATATGCTGCTT+GGG | + | chr1.1:5638652-5638671 | None:intergenic | 50.0% |
! | TTTGGAGCCAAGAGCTTTGG+AGG | - | chr1.1:5633961-5633980 | MS.gene32973:intron | 50.0% |
!! | CCTAGGCCCACCTTGTTATT+TGG | + | chr1.1:5634444-5634463 | None:intergenic | 50.0% |
!! | CTATGGTGCTGGTTATCCTC+AGG | - | chr1.1:5638944-5638963 | MS.gene32973:CDS | 50.0% |
!! | CTTAGGGTGTCATTGTGAGC+TGG | - | chr1.1:5633926-5633945 | MS.gene32973:intron | 50.0% |
!! | TCTCAAAGAGCACCACCTTC+TGG | - | chr1.1:5638837-5638856 | MS.gene32973:CDS | 50.0% |
!! | TTGGAGCCAAGAGCTTTGGA+GGG | - | chr1.1:5633962-5633981 | MS.gene32973:intron | 50.0% |
!!! | GGTTTTGGAGCCAAGAGCTT+TGG | - | chr1.1:5633958-5633977 | MS.gene32973:intron | 50.0% |
AAACCGGTGGTTCGTGAGTG+AGG | + | chr1.1:5632732-5632751 | None:intergenic | 55.0% | |
AATATCCAGAAGGAGGGGGC+TGG | + | chr1.1:5638800-5638819 | None:intergenic | 55.0% | |
AATGCAAGTGGGAATGCCCG+TGG | - | chr1.1:5638990-5639009 | MS.gene32973:CDS | 55.0% | |
ACCGGGGCAGGTATATTCTC+AGG | - | chr1.1:5638353-5638372 | MS.gene32973:intron | 55.0% | |
AGGGATGTCTGGGTTTCCTC+TGG | - | chr1.1:5636051-5636070 | MS.gene32973:intron | 55.0% | |
AGGTTGTTGAGAAGCGGCAG+GGG | + | chr1.1:5638070-5638089 | None:intergenic | 55.0% | |
AGTGGTACTCCGCCTGCATA+CGG | - | chr1.1:5638717-5638736 | MS.gene32973:intron | 55.0% | |
AGTTCGAAATCAGCGGTGGC+GGG | + | chr1.1:5632798-5632817 | None:intergenic | 55.0% | |
ATATCCAGAAGGAGGGGGCT+GGG | + | chr1.1:5638799-5638818 | None:intergenic | 55.0% | |
ATGGCTCAGCCCCAAGCTAT+GGG | - | chr1.1:5638451-5638470 | MS.gene32973:intron | 55.0% | |
CAGCAACAGCAGAATCCTGG+TGG | - | chr1.1:5638264-5638283 | MS.gene32973:intron | 55.0% | |
CAGGCACCACATGGTTCCTA+TGG | - | chr1.1:5638927-5638946 | MS.gene32973:CDS | 55.0% | |
CAGGCTGAGTCTGGAGGTAA+TGG | - | chr1.1:5634360-5634379 | MS.gene32973:intron | 55.0% | |
CAGGTTGTTGAGAAGCGGCA+GGG | + | chr1.1:5638071-5638090 | None:intergenic | 55.0% | |
CAGTCACCTAATGCTGCTGG+AGG | - | chr1.1:5638747-5638766 | MS.gene32973:intron | 55.0% | |
CCAACCTCCCAAGCAGCATA+TGG | - | chr1.1:5638642-5638661 | MS.gene32973:intron | 55.0% | |
CCACATGGTTCCTATGGTGC+TGG | - | chr1.1:5638933-5638952 | MS.gene32973:CDS | 55.0% | |
CCAGCACCATAGGAACCATG+TGG | + | chr1.1:5638936-5638955 | None:intergenic | 55.0% | |
CCAGGATTCTGCTGTTGCTG+AGG | + | chr1.1:5638264-5638283 | None:intergenic | 55.0% | |
CCTCAGCAACAGCAGAATCC+TGG | - | chr1.1:5638261-5638280 | MS.gene32973:intron | 55.0% | |
CGGTCAACCTGGTTATGGTC+AGG | - | chr1.1:5638908-5638927 | MS.gene32973:CDS | 55.0% | |
CTTTCAGTGGATGTGTCGCC+TGG | + | chr1.1:5634878-5634897 | None:intergenic | 55.0% | |
GACGGAGGACCATATGATGG+AGG | + | chr1.1:5638870-5638889 | None:intergenic | 55.0% | |
GAGAATATACCTGCCCCGGT+TGG | + | chr1.1:5638353-5638372 | None:intergenic | 55.0% | |
GAGTTCGAAATCAGCGGTGG+CGG | + | chr1.1:5632799-5632818 | None:intergenic | 55.0% | |
GCCCCAGCATATTCTGCTGA+TGG | - | chr1.1:5638966-5638985 | MS.gene32973:CDS | 55.0% | |
GCTGCCAACTATCCACCACA+AGG | - | chr1.1:5638591-5638610 | MS.gene32973:intron | 55.0% | |
GCTGGAGGTTATGGTCAACC+TGG | - | chr1.1:5638762-5638781 | MS.gene32973:intron | 55.0% | |
GGAGGACCATAACCAGAAGG+TGG | + | chr1.1:5638852-5638871 | None:intergenic | 55.0% | |
GGCTGAGCATACCCTGATTG+TGG | + | chr1.1:5638405-5638424 | None:intergenic | 55.0% | |
GGCTGCTCAGCCAAGTTATG+GGG | - | chr1.1:5638614-5638633 | MS.gene32973:intron | 55.0% | |
GGCTGTGCATAGCCATAACC+AGG | + | chr1.1:5638090-5638109 | None:intergenic | 55.0% | |
GGGCTGCTCAGCCAAGTTAT+GGG | - | chr1.1:5638613-5638632 | MS.gene32973:intron | 55.0% | |
GGGGGGACGTTGTTGTAAGA+AGG | + | chr1.1:5632774-5632793 | None:intergenic | 55.0% | |
GGTCCGTTTGACGACATCAG+AGG | + | chr1.1:5632877-5632896 | None:intergenic | 55.0% | |
GGTTATGGCTATGCACAGCC+TGG | - | chr1.1:5638090-5638109 | MS.gene32973:CDS | 55.0% | |
GGTTATGGTCAGGCACCACA+TGG | - | chr1.1:5638918-5638937 | MS.gene32973:CDS | 55.0% | |
GTGCCTCAGCAAGCTTATGC+AGG | - | chr1.1:5638144-5638163 | MS.gene32973:CDS | 55.0% | |
GTTGGCGGTACCCCATAACT+TGG | + | chr1.1:5638627-5638646 | None:intergenic | 55.0% | |
GTTGGCTGCCATATGCTGCT+TGG | + | chr1.1:5638653-5638672 | None:intergenic | 55.0% | |
TAAGCAGTCCCATCAGCTGG+AGG | + | chr1.1:5638297-5638316 | None:intergenic | 55.0% | |
TATGGCTCAGCCCCAAGCTA+TGG | - | chr1.1:5638450-5638469 | MS.gene32973:intron | 55.0% | |
TCATATGGTGCTCCTGCAGG+CGG | - | chr1.1:5638888-5638907 | MS.gene32973:CDS | 55.0% | |
TCCGGTGGTTACTCTCAGCA+AGG | - | chr1.1:5638012-5638031 | MS.gene32973:CDS | 55.0% | |
TGGTTATAACCAACCGGGGC+AGG | - | chr1.1:5638341-5638360 | MS.gene32973:intron | 55.0% | |
TGTGGTGCCTGACCATAACC+AGG | + | chr1.1:5638918-5638937 | None:intergenic | 55.0% | |
TTCAGTGGATGTGTCGCCTG+GGG | + | chr1.1:5634876-5634895 | None:intergenic | 55.0% | |
! | CAGCATTTGGGCTAGGCTGT+TGG | + | chr1.1:5638575-5638594 | None:intergenic | 55.0% |
! | CCATATGCTGCTTGGGAGGT+TGG | + | chr1.1:5638645-5638664 | None:intergenic | 55.0% |
! | CCCCGGTTGGTTATAACCAG+CGG | + | chr1.1:5638340-5638359 | None:intergenic | 55.0% |
! | CCGCTGGTTATAACCAACCG+GGG | - | chr1.1:5638337-5638356 | MS.gene32973:intron | 55.0% |
! | CTATGATGGAGCACCTGCAC+AGG | - | chr1.1:5639019-5639038 | MS.gene32973:CDS | 55.0% |
! | GCTCTTTGAGAGCCTGCTTC+TGG | + | chr1.1:5638828-5638847 | None:intergenic | 55.0% |
! | TATGCAGGCGGAGTACCACT+TGG | + | chr1.1:5638717-5638736 | None:intergenic | 55.0% |
! | TATGCTGCTTGGGAGGTTGG+CGG | + | chr1.1:5638642-5638661 | None:intergenic | 55.0% |
!! | AGCCCCTTGTGGTGGATAGT+TGG | + | chr1.1:5638598-5638617 | None:intergenic | 55.0% |
!! | CCTGCAGGAGCACCATATGA+CGG | + | chr1.1:5638888-5638907 | None:intergenic | 55.0% |
!! | TGCAGTGGACTGGTCCCAAT+TGG | + | chr1.1:5638202-5638221 | None:intergenic | 55.0% |
AGAAGGAGGAGGAGGTCCGT+CGG | + | chr1.1:5632757-5632776 | None:intergenic | 60.0% | |
AGACTGCTGGGCAGTTGCAG+TGG | + | chr1.1:5638217-5638236 | None:intergenic | 60.0% | |
AGGAGGTCCGTCGGAGAAAC+CGG | + | chr1.1:5632748-5632767 | None:intergenic | 60.0% | |
CCAGGTTGTTGAGAAGCGGC+AGG | + | chr1.1:5638072-5638091 | None:intergenic | 60.0% | |
CCGTCATATGGTGCTCCTGC+AGG | - | chr1.1:5638885-5638904 | MS.gene32973:CDS | 60.0% | |
CCTCCTCACTCACGAACCAC+CGG | - | chr1.1:5632726-5632745 | MS.gene32973:CDS | 60.0% | |
CGACGAATGACTGGACAGGG+TGG | - | chr1.1:5634393-5634412 | MS.gene32973:intron | 60.0% | |
GACGACATCAGAGGGAGCAG+CGG | + | chr1.1:5632868-5632887 | None:intergenic | 60.0% | |
GCAGAATATGCTGGGGCCTG+AGG | + | chr1.1:5638963-5638982 | None:intergenic | 60.0% | |
GCAGGCGGTCAACCTGGTTA+TGG | - | chr1.1:5638903-5638922 | MS.gene32973:CDS | 60.0% | |
GCCCGTGGTGGTAGCTATGA+TGG | - | chr1.1:5639005-5639024 | MS.gene32973:CDS | 60.0% | |
GGGGCTGCTCAGCCAAGTTA+TGG | - | chr1.1:5638612-5638631 | MS.gene32973:intron | 60.0% | |
GGTTATCCTCCCCACTCAGC+TGG | - | chr1.1:5638165-5638184 | MS.gene32973:intron | 60.0% | |
GGTTGTTGAGAAGCGGCAGG+GGG | + | chr1.1:5638069-5638088 | None:intergenic | 60.0% | |
GTCCTGCACCTCCAGCTGAT+GGG | - | chr1.1:5638286-5638305 | MS.gene32973:intron | 60.0% | |
GTGGTTCGTGAGTGAGGAGG+TGG | + | chr1.1:5632726-5632745 | None:intergenic | 60.0% | |
GTTGGACCAGGGTATGCTCC+AGG | + | chr1.1:5638111-5638130 | None:intergenic | 60.0% | |
TATCCACCAGCTGAGTGGGG+AGG | + | chr1.1:5638174-5638193 | None:intergenic | 60.0% | |
TATCCTCCCCACTCAGCTGG+TGG | - | chr1.1:5638168-5638187 | MS.gene32973:intron | 60.0% | |
TCAGTGGATGTGTCGCCTGG+GGG | + | chr1.1:5634875-5634894 | None:intergenic | 60.0% | |
TCGCCTGGGGGAAGATGAAG+AGG | + | chr1.1:5634863-5634882 | None:intergenic | 60.0% | |
! | CCTGCCGCTTCTCAACAACC+TGG | - | chr1.1:5638069-5638088 | MS.gene32973:CDS | 60.0% |
! | GCTGCCATATGCTGCTTGGG+AGG | + | chr1.1:5638649-5638668 | None:intergenic | 60.0% |
! | TAACCAGGTTGACCGCCTGC+AGG | + | chr1.1:5638903-5638922 | None:intergenic | 60.0% |
!! | CGAACCACCGGTTTCTCCGA+CGG | - | chr1.1:5632738-5632757 | MS.gene32973:CDS | 60.0% |
!! | GCAGGAGCACCATATGACGG+AGG | + | chr1.1:5638885-5638904 | None:intergenic | 60.0% |
AAGCTCGGCCACCCTCTAGC+TGG | - | chr1.1:5638040-5638059 | MS.gene32973:CDS | 65.0% | |
ACCTGCACAGGGAGCTCAGC+AGG | - | chr1.1:5639031-5639050 | MS.gene32973:CDS | 65.0% | |
AGCTAGAGGGTGGCCGAGCT+TGG | + | chr1.1:5638041-5638060 | None:intergenic | 65.0% | |
AGCTCGGCCACCCTCTAGCT+GGG | - | chr1.1:5638041-5638060 | MS.gene32973:CDS | 65.0% | |
AGGTCCGTCGGAGAAACCGG+TGG | + | chr1.1:5632745-5632764 | None:intergenic | 65.0% | |
CCGGTGGTTCGTGAGTGAGG+AGG | + | chr1.1:5632729-5632748 | None:intergenic | 65.0% | |
CTTGGCTGAGCAGCCCCTTG+TGG | + | chr1.1:5638609-5638628 | None:intergenic | 65.0% | |
GCAAGTGGGAATGCCCGTGG+TGG | - | chr1.1:5638993-5639012 | MS.gene32973:CDS | 65.0% | |
GCACAGCCTGGAGCATACCC+TGG | - | chr1.1:5638102-5638121 | MS.gene32973:CDS | 65.0% | |
GCTGGGCAGTTGCAGTGGAC+TGG | + | chr1.1:5638212-5638231 | None:intergenic | 65.0% | |
GGCACCAGAGAGGAGACGAG+CGG | + | chr1.1:5632847-5632866 | None:intergenic | 65.0% | |
GGCTGGGAAGGAGGATACCC+AGG | + | chr1.1:5638783-5638802 | None:intergenic | 65.0% | |
GGTCCTGCACCTCCAGCTGA+TGG | - | chr1.1:5638285-5638304 | MS.gene32973:intron | 65.0% | |
! | GGGAGAGGGTGTGCTTCTGC+TGG | - | chr1.1:5637731-5637750 | MS.gene32973:intron | 65.0% |
! | GTCCCATCAGCTGGAGGTGC+AGG | + | chr1.1:5638291-5638310 | None:intergenic | 65.0% |
!! | AAATCAGCGGTGGCGGGAGG+GGG | + | chr1.1:5632792-5632811 | None:intergenic | 65.0% |
!! | CGAAATCAGCGGTGGCGGGA+GGG | + | chr1.1:5632794-5632813 | None:intergenic | 65.0% |
!! | GAAATCAGCGGTGGCGGGAG+GGG | + | chr1.1:5632793-5632812 | None:intergenic | 65.0% |
!! | TCGAAATCAGCGGTGGCGGG+AGG | + | chr1.1:5632795-5632814 | None:intergenic | 65.0% |
AGGGAGCAGCGGCACCAGAG+AGG | + | chr1.1:5632857-5632876 | None:intergenic | 70.0% | |
CCAGAAGGAGGGGGCTGGGA+AGG | + | chr1.1:5638795-5638814 | None:intergenic | 70.0% | |
CCTTCCCAGCCCCCTCCTTC+TGG | - | chr1.1:5638792-5638811 | MS.gene32973:intron | 70.0% | |
GAAGGAGGGGGCTGGGAAGG+AGG | + | chr1.1:5638792-5638811 | None:intergenic | 70.0% | |
GCAGGGGGAGCCCAGCTAGA+GGG | + | chr1.1:5638054-5638073 | None:intergenic | 70.0% | |
GCCTGCTGAGCTCCCTGTGC+AGG | + | chr1.1:5639035-5639054 | None:intergenic | 70.0% | |
GCTCCTGCAGGCGGTCAACC+TGG | - | chr1.1:5638897-5638916 | MS.gene32973:CDS | 70.0% | |
GGCTGAGCAGCCCCTTGTGG+TGG | + | chr1.1:5638606-5638625 | None:intergenic | 70.0% | |
GTCGCCGCTCGTCTCCTCTC+TGG | - | chr1.1:5632840-5632859 | MS.gene32973:CDS | 70.0% | |
! | GCTGGAGGTGCAGGACCACC+AGG | + | chr1.1:5638282-5638301 | None:intergenic | 70.0% |
!! | AATCAGCGGTGGCGGGAGGG+GGG | + | chr1.1:5632791-5632810 | None:intergenic | 70.0% |
GGCAGGGGGAGCCCAGCTAG+AGG | + | chr1.1:5638055-5638074 | None:intergenic | 75.0% | |
GGGGGAGCCCAGCTAGAGGG+TGG | + | chr1.1:5638051-5638070 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 5632660 | 5639082 | 5632660 | ID=MS.gene32973 |
chr1.1 | mRNA | 5632660 | 5639082 | 5632660 | ID=MS.gene32973.t1;Parent=MS.gene32973 |
chr1.1 | exon | 5638806 | 5639082 | 5638806 | ID=MS.gene32973.t1.exon1;Parent=MS.gene32973.t1 |
chr1.1 | CDS | 5638806 | 5639082 | 5638806 | ID=cds.MS.gene32973.t1;Parent=MS.gene32973.t1 |
chr1.1 | exon | 5637902 | 5638176 | 5637902 | ID=MS.gene32973.t1.exon2;Parent=MS.gene32973.t1 |
chr1.1 | CDS | 5637902 | 5638176 | 5637902 | ID=cds.MS.gene32973.t1;Parent=MS.gene32973.t1 |
chr1.1 | exon | 5637290 | 5637379 | 5637290 | ID=MS.gene32973.t1.exon3;Parent=MS.gene32973.t1 |
chr1.1 | CDS | 5637290 | 5637379 | 5637290 | ID=cds.MS.gene32973.t1;Parent=MS.gene32973.t1 |
chr1.1 | exon | 5637112 | 5637183 | 5637112 | ID=MS.gene32973.t1.exon4;Parent=MS.gene32973.t1 |
chr1.1 | CDS | 5637112 | 5637183 | 5637112 | ID=cds.MS.gene32973.t1;Parent=MS.gene32973.t1 |
chr1.1 | exon | 5636769 | 5636888 | 5636769 | ID=MS.gene32973.t1.exon5;Parent=MS.gene32973.t1 |
chr1.1 | CDS | 5636769 | 5636888 | 5636769 | ID=cds.MS.gene32973.t1;Parent=MS.gene32973.t1 |
chr1.1 | exon | 5632660 | 5633754 | 5632660 | ID=MS.gene32973.t1.exon6;Parent=MS.gene32973.t1 |
chr1.1 | CDS | 5632660 | 5633754 | 5632660 | ID=cds.MS.gene32973.t1;Parent=MS.gene32973.t1 |
Gene Sequence |
Protein sequence |