Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33334.t1 | XP_013454718.1 | 83.5 | 315 | 12 | 1 | 1 | 275 | 1 | 315 | 6.50E-147 | 530 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33334.t1 | Q945B6 | 46.6 | 311 | 115 | 4 | 8 | 272 | 13 | 318 | 1.1e-75 | 284.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33334.t1 | A0A072UG76 | 83.5 | 315 | 12 | 1 | 1 | 275 | 1 | 315 | 4.7e-147 | 530.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene33334 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene33334 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene33334 | 0.809218 | 2.11E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene33334 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene33334 | 0.806024 | 1.01E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene33334 | 0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene33334 | 0.804128 | 2.51E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene33334 | 0.81765 | 2.95E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene33334 | 0.813951 | 1.97E-51 | -1.69E-46 |
| MS.gene056688 | MS.gene33334 | 0.8025 | 5.45E-49 | -1.69E-46 |
| MS.gene056697 | MS.gene33334 | 0.827479 | 1.53E-54 | -1.69E-46 |
| MS.gene056748 | MS.gene33334 | 0.809854 | 1.54E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene33334 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene33334 | 0.803914 | 2.78E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene33334 | 0.823647 | 1.24E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene33334 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene058381 | MS.gene33334 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene33334 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene33334 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene33334 | 0.809937 | 1.48E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene33334 | 0.819608 | 1.06E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33334.t1 | MTR_4g011690 | 83.492 | 315 | 12 | 1 | 1 | 275 | 1 | 315 | 0.0 | 534 |
| MS.gene33334.t1 | MTR_4g011720 | 72.063 | 315 | 47 | 2 | 1 | 275 | 1 | 314 | 4.72e-167 | 465 |
| MS.gene33334.t1 | MTR_4g011720 | 68.803 | 234 | 32 | 2 | 1 | 194 | 1 | 233 | 8.17e-110 | 318 |
| MS.gene33334.t1 | MTR_7g090520 | 32.915 | 319 | 167 | 7 | 1 | 275 | 1 | 316 | 9.07e-60 | 192 |
| MS.gene33334.t1 | MTR_3g108520 | 32.915 | 319 | 159 | 10 | 1 | 268 | 1 | 315 | 2.06e-49 | 166 |
| MS.gene33334.t1 | MTR_1g011600 | 32.765 | 293 | 145 | 8 | 1 | 243 | 1 | 291 | 3.06e-46 | 157 |
| MS.gene33334.t1 | MTR_4g021380 | 30.032 | 313 | 168 | 7 | 4 | 267 | 2 | 312 | 8.77e-44 | 151 |
| MS.gene33334.t1 | MTR_4g021360 | 30.284 | 317 | 168 | 9 | 1 | 268 | 1 | 313 | 9.17e-41 | 143 |
| MS.gene33334.t1 | MTR_6g035160 | 45.652 | 138 | 72 | 3 | 124 | 259 | 29 | 165 | 2.19e-35 | 125 |
| MS.gene33334.t1 | MTR_5g024940 | 30.769 | 260 | 150 | 8 | 31 | 267 | 21 | 273 | 1.59e-31 | 118 |
| MS.gene33334.t1 | MTR_8g030880 | 27.869 | 305 | 164 | 7 | 9 | 267 | 10 | 304 | 3.33e-26 | 105 |
| MS.gene33334.t1 | MTR_5g027230 | 26.812 | 276 | 155 | 6 | 32 | 266 | 22 | 291 | 3.77e-25 | 102 |
| MS.gene33334.t1 | MTR_5g025050 | 28.125 | 288 | 149 | 8 | 9 | 253 | 5 | 277 | 4.60e-25 | 101 |
| MS.gene33334.t1 | MTR_5g025090 | 25.000 | 300 | 172 | 8 | 9 | 271 | 5 | 288 | 1.84e-23 | 97.4 |
| MS.gene33334.t1 | MTR_5g032870 | 40.650 | 123 | 71 | 2 | 142 | 264 | 216 | 336 | 1.70e-22 | 95.5 |
| MS.gene33334.t1 | MTR_5g032880 | 29.373 | 303 | 163 | 9 | 9 | 264 | 376 | 674 | 2.54e-22 | 96.7 |
| MS.gene33334.t1 | MTR_5g032880 | 38.168 | 131 | 78 | 3 | 142 | 272 | 208 | 335 | 7.42e-21 | 92.4 |
| MS.gene33334.t1 | MTR_7g102820 | 27.129 | 317 | 166 | 10 | 8 | 267 | 66 | 374 | 1.40e-21 | 93.2 |
| MS.gene33334.t1 | MTR_7g077670 | 26.207 | 290 | 163 | 8 | 35 | 275 | 30 | 317 | 2.79e-21 | 91.7 |
| MS.gene33334.t1 | MTR_5g025060 | 27.027 | 259 | 164 | 8 | 9 | 253 | 6 | 253 | 3.24e-21 | 90.9 |
| MS.gene33334.t1 | MTR_1g070120 | 24.000 | 300 | 179 | 8 | 9 | 265 | 38 | 331 | 5.00e-21 | 91.3 |
| MS.gene33334.t1 | MTR_8g024120 | 24.161 | 298 | 175 | 6 | 5 | 258 | 38 | 328 | 3.13e-20 | 89.0 |
| MS.gene33334.t1 | MTR_0009s0050 | 38.211 | 123 | 73 | 3 | 142 | 263 | 38 | 158 | 6.82e-20 | 85.1 |
| MS.gene33334.t1 | MTR_4g087110 | 35.211 | 142 | 90 | 2 | 114 | 254 | 187 | 327 | 7.81e-20 | 88.2 |
| MS.gene33334.t1 | MTR_8g033380 | 31.250 | 160 | 104 | 3 | 113 | 268 | 206 | 363 | 1.60e-19 | 87.4 |
| MS.gene33334.t1 | MTR_7g451860 | 27.547 | 265 | 149 | 8 | 8 | 232 | 40 | 301 | 2.50e-19 | 86.7 |
| MS.gene33334.t1 | MTR_7g047670 | 27.547 | 265 | 149 | 8 | 8 | 232 | 40 | 301 | 2.50e-19 | 86.7 |
| MS.gene33334.t1 | MTR_0009s0050 | 38.211 | 123 | 73 | 3 | 142 | 263 | 120 | 240 | 3.16e-19 | 85.1 |
| MS.gene33334.t1 | MTR_0009s0050 | 38.211 | 123 | 73 | 3 | 142 | 263 | 120 | 240 | 4.07e-19 | 84.7 |
| MS.gene33334.t1 | MTR_1g034140 | 31.915 | 141 | 90 | 3 | 126 | 265 | 191 | 326 | 5.52e-19 | 85.5 |
| MS.gene33334.t1 | MTR_0009s0050 | 38.211 | 123 | 73 | 3 | 142 | 263 | 218 | 338 | 9.06e-19 | 85.1 |
| MS.gene33334.t1 | MTR_0009s0050 | 38.211 | 123 | 73 | 3 | 142 | 263 | 218 | 338 | 1.14e-18 | 84.7 |
| MS.gene33334.t1 | MTR_5g005570 | 26.502 | 283 | 162 | 9 | 8 | 253 | 36 | 309 | 1.26e-18 | 84.3 |
| MS.gene33334.t1 | MTR_1g062110 | 25.714 | 315 | 167 | 9 | 8 | 267 | 65 | 367 | 2.58e-18 | 84.0 |
| MS.gene33334.t1 | MTR_1g070135 | 31.429 | 140 | 94 | 2 | 126 | 265 | 194 | 331 | 2.89e-18 | 83.6 |
| MS.gene33334.t1 | MTR_2g083030 | 25.862 | 290 | 166 | 8 | 3 | 253 | 31 | 310 | 3.70e-18 | 83.2 |
| MS.gene33334.t1 | MTR_1g070110 | 36.975 | 119 | 73 | 2 | 144 | 262 | 107 | 223 | 3.85e-18 | 81.6 |
| MS.gene33334.t1 | MTR_3g117420 | 32.450 | 151 | 99 | 3 | 115 | 264 | 199 | 347 | 4.56e-18 | 83.2 |
| MS.gene33334.t1 | MTR_3g092890 | 25.574 | 305 | 168 | 10 | 9 | 266 | 38 | 330 | 5.17e-18 | 82.8 |
| MS.gene33334.t1 | MTR_8g093930 | 25.704 | 284 | 151 | 10 | 33 | 264 | 70 | 345 | 5.60e-18 | 82.8 |
| MS.gene33334.t1 | MTR_3g096500 | 25.152 | 330 | 175 | 11 | 8 | 275 | 65 | 384 | 6.88e-18 | 82.8 |
| MS.gene33334.t1 | MTR_7g081710 | 24.204 | 314 | 166 | 9 | 9 | 267 | 49 | 345 | 1.06e-17 | 82.0 |
| MS.gene33334.t1 | MTR_4g100600 | 26.087 | 322 | 172 | 11 | 1 | 265 | 1 | 313 | 1.27e-17 | 81.6 |
| MS.gene33334.t1 | MTR_1g034120 | 31.690 | 142 | 95 | 2 | 114 | 254 | 189 | 329 | 1.33e-17 | 81.6 |
| MS.gene33334.t1 | MTR_5g082750 | 29.452 | 292 | 149 | 12 | 4 | 245 | 44 | 328 | 1.67e-17 | 81.6 |
| MS.gene33334.t1 | MTR_4g087090 | 28.028 | 289 | 149 | 8 | 9 | 242 | 30 | 314 | 2.66e-17 | 80.9 |
| MS.gene33334.t1 | MTR_8g074050 | 32.911 | 158 | 101 | 5 | 115 | 269 | 199 | 354 | 3.78e-17 | 80.5 |
| MS.gene33334.t1 | MTR_1g070085 | 23.432 | 303 | 178 | 7 | 9 | 265 | 37 | 331 | 3.89e-17 | 80.5 |
| MS.gene33334.t1 | MTR_1g070085 | 23.432 | 303 | 178 | 7 | 9 | 265 | 37 | 331 | 3.89e-17 | 80.5 |
| MS.gene33334.t1 | MTR_1g070080 | 35.115 | 131 | 82 | 3 | 135 | 265 | 204 | 331 | 5.38e-17 | 80.1 |
| MS.gene33334.t1 | MTR_4g087140 | 32.639 | 144 | 95 | 2 | 112 | 254 | 186 | 328 | 6.48e-17 | 79.7 |
| MS.gene33334.t1 | MTR_1g070085 | 32.258 | 124 | 82 | 2 | 142 | 265 | 132 | 253 | 8.49e-17 | 78.6 |
| MS.gene33334.t1 | MTR_1g070100 | 27.815 | 151 | 107 | 2 | 115 | 265 | 101 | 249 | 8.79e-17 | 78.2 |
| MS.gene33334.t1 | MTR_6g464620 | 34.559 | 136 | 84 | 3 | 126 | 258 | 230 | 363 | 9.55e-17 | 79.7 |
| MS.gene33334.t1 | MTR_1g034060 | 30.986 | 142 | 96 | 2 | 114 | 254 | 189 | 329 | 1.01e-16 | 79.3 |
| MS.gene33334.t1 | MTR_1g086550 | 30.435 | 138 | 92 | 2 | 136 | 270 | 197 | 333 | 1.17e-16 | 79.0 |
| MS.gene33334.t1 | MTR_8g074070 | 32.278 | 158 | 102 | 4 | 115 | 269 | 180 | 335 | 2.21e-16 | 78.2 |
| MS.gene33334.t1 | MTR_1g102070 | 30.675 | 163 | 107 | 3 | 115 | 273 | 214 | 374 | 2.27e-16 | 78.6 |
| MS.gene33334.t1 | MTR_8g074070 | 32.278 | 158 | 102 | 4 | 115 | 269 | 199 | 354 | 2.62e-16 | 78.2 |
| MS.gene33334.t1 | MTR_7g062600 | 25.413 | 303 | 174 | 9 | 4 | 261 | 46 | 341 | 3.13e-16 | 77.8 |
| MS.gene33334.t1 | MTR_7g062570 | 34.615 | 130 | 82 | 3 | 127 | 255 | 211 | 338 | 3.37e-16 | 77.8 |
| MS.gene33334.t1 | MTR_1g081840 | 35.652 | 115 | 72 | 2 | 126 | 240 | 219 | 331 | 3.38e-16 | 77.8 |
| MS.gene33334.t1 | MTR_4g074130 | 25.843 | 267 | 156 | 9 | 8 | 235 | 39 | 302 | 4.80e-16 | 77.4 |
| MS.gene33334.t1 | MTR_4g123020 | 33.065 | 124 | 82 | 1 | 136 | 259 | 185 | 307 | 8.19e-16 | 76.3 |
| MS.gene33334.t1 | MTR_4g087100 | 30.000 | 140 | 96 | 2 | 116 | 254 | 189 | 327 | 8.84e-16 | 76.6 |
| MS.gene33334.t1 | MTR_3g043900 | 26.712 | 292 | 158 | 9 | 9 | 257 | 56 | 334 | 9.05e-16 | 76.6 |
| MS.gene33334.t1 | MTR_7g062580 | 33.094 | 139 | 90 | 3 | 127 | 264 | 211 | 347 | 1.18e-15 | 76.3 |
| MS.gene33334.t1 | MTR_5g048570 | 35.772 | 123 | 76 | 3 | 142 | 263 | 216 | 336 | 1.26e-15 | 76.3 |
| MS.gene33334.t1 | MTR_0009s0400 | 36.364 | 121 | 74 | 3 | 142 | 261 | 14 | 132 | 1.53e-15 | 72.4 |
| MS.gene33334.t1 | MTR_5g055680 | 35.772 | 123 | 76 | 3 | 142 | 263 | 218 | 338 | 1.61e-15 | 75.9 |
| MS.gene33334.t1 | MTR_3g088745 | 30.882 | 136 | 89 | 3 | 126 | 258 | 202 | 335 | 2.16e-15 | 75.5 |
| MS.gene33334.t1 | MTR_2g437380 | 37.097 | 124 | 74 | 3 | 142 | 263 | 131 | 252 | 2.65e-15 | 74.3 |
| MS.gene33334.t1 | MTR_2g072890 | 26.316 | 304 | 175 | 11 | 8 | 267 | 51 | 349 | 2.67e-15 | 75.1 |
| MS.gene33334.t1 | MTR_2g437380 | 26.403 | 303 | 169 | 10 | 9 | 263 | 50 | 346 | 3.22e-15 | 75.1 |
| MS.gene33334.t1 | MTR_5g048550 | 32.099 | 162 | 98 | 6 | 109 | 261 | 178 | 336 | 4.29e-15 | 74.7 |
| MS.gene33334.t1 | MTR_0056s0160 | 37.190 | 121 | 73 | 3 | 142 | 261 | 103 | 221 | 4.55e-15 | 73.2 |
| MS.gene33334.t1 | MTR_8g093980 | 25.490 | 306 | 172 | 9 | 8 | 264 | 58 | 356 | 6.13e-15 | 74.3 |
| MS.gene33334.t1 | MTR_6g015950 | 26.241 | 282 | 157 | 7 | 32 | 266 | 55 | 332 | 9.57e-15 | 73.6 |
| MS.gene33334.t1 | MTR_2g033270 | 29.851 | 134 | 92 | 2 | 141 | 273 | 186 | 318 | 1.01e-14 | 73.2 |
| MS.gene33334.t1 | MTR_5g055800 | 38.017 | 121 | 71 | 4 | 142 | 261 | 218 | 335 | 1.15e-14 | 73.2 |
| MS.gene33334.t1 | MTR_8g461330 | 32.500 | 120 | 80 | 1 | 142 | 261 | 203 | 321 | 1.32e-14 | 73.2 |
| MS.gene33334.t1 | MTR_5g055900 | 34.959 | 123 | 77 | 3 | 142 | 263 | 218 | 338 | 1.44e-14 | 73.2 |
| MS.gene33334.t1 | MTR_0328s0030 | 35.075 | 134 | 80 | 4 | 142 | 270 | 216 | 347 | 1.72e-14 | 72.8 |
| MS.gene33334.t1 | MTR_3g070860 | 26.502 | 283 | 159 | 9 | 9 | 245 | 50 | 329 | 1.99e-14 | 72.8 |
| MS.gene33334.t1 | MTR_3g063180 | 33.582 | 134 | 81 | 4 | 142 | 269 | 219 | 350 | 2.55e-14 | 72.4 |
| MS.gene33334.t1 | MTR_7g063730 | 26.498 | 317 | 175 | 13 | 8 | 275 | 63 | 370 | 2.71e-14 | 72.4 |
| MS.gene33334.t1 | MTR_0009s0480 | 25.902 | 305 | 171 | 11 | 3 | 261 | 40 | 335 | 2.93e-14 | 72.0 |
| MS.gene33334.t1 | MTR_4g015790 | 36.620 | 142 | 85 | 5 | 121 | 260 | 219 | 357 | 3.10e-14 | 72.4 |
| MS.gene33334.t1 | MTR_5g059130 | 25.517 | 290 | 152 | 10 | 8 | 246 | 43 | 319 | 3.59e-14 | 71.6 |
| MS.gene33334.t1 | MTR_5g048850 | 35.772 | 123 | 76 | 3 | 142 | 263 | 218 | 338 | 4.78e-14 | 71.6 |
| MS.gene33334.t1 | MTR_7g068650 | 28.669 | 293 | 157 | 12 | 9 | 253 | 54 | 342 | 5.37e-14 | 71.6 |
| MS.gene33334.t1 | MTR_2g083000 | 31.250 | 128 | 86 | 2 | 105 | 232 | 165 | 290 | 7.65e-14 | 70.9 |
| MS.gene33334.t1 | MTR_3g117485 | 32.231 | 121 | 79 | 3 | 127 | 246 | 139 | 257 | 1.07e-13 | 70.1 |
| MS.gene33334.t1 | MTR_4g116010 | 32.520 | 123 | 80 | 3 | 142 | 263 | 220 | 340 | 1.21e-13 | 70.5 |
| MS.gene33334.t1 | MTR_4g087130 | 33.333 | 141 | 92 | 2 | 114 | 253 | 186 | 325 | 1.30e-13 | 70.5 |
| MS.gene33334.t1 | MTR_8g064200 | 33.582 | 134 | 85 | 4 | 130 | 261 | 216 | 347 | 1.36e-13 | 70.5 |
| MS.gene33334.t1 | MTR_7g062550 | 25.253 | 297 | 169 | 10 | 4 | 255 | 55 | 343 | 1.36e-13 | 70.5 |
| MS.gene33334.t1 | MTR_8g064200 | 33.582 | 134 | 85 | 4 | 130 | 261 | 211 | 342 | 1.42e-13 | 70.1 |
| MS.gene33334.t1 | MTR_4g087120 | 32.353 | 136 | 90 | 2 | 114 | 248 | 187 | 321 | 1.81e-13 | 69.7 |
| MS.gene33334.t1 | MTR_3g117485 | 32.231 | 121 | 79 | 3 | 127 | 246 | 211 | 329 | 2.15e-13 | 69.7 |
| MS.gene33334.t1 | MTR_8g075830 | 35.484 | 124 | 76 | 4 | 133 | 255 | 205 | 325 | 2.54e-13 | 69.7 |
| MS.gene33334.t1 | MTR_1g033810 | 26.102 | 295 | 167 | 10 | 4 | 253 | 42 | 330 | 4.60e-13 | 68.6 |
| MS.gene33334.t1 | MTR_3g045230 | 38.462 | 117 | 65 | 4 | 143 | 257 | 224 | 335 | 5.31e-13 | 68.6 |
| MS.gene33334.t1 | MTR_4g093840 | 26.901 | 171 | 113 | 5 | 86 | 255 | 189 | 348 | 9.73e-13 | 67.8 |
| MS.gene33334.t1 | MTR_4g096840 | 24.186 | 215 | 151 | 6 | 61 | 269 | 121 | 329 | 9.84e-13 | 67.8 |
| MS.gene33334.t1 | MTR_2g019370 | 26.190 | 168 | 118 | 5 | 96 | 261 | 158 | 321 | 1.01e-12 | 67.8 |
| MS.gene33334.t1 | MTR_3g058610 | 33.871 | 124 | 78 | 4 | 133 | 255 | 205 | 325 | 1.02e-12 | 67.8 |
| MS.gene33334.t1 | MTR_8g075890 | 33.871 | 124 | 78 | 4 | 133 | 255 | 205 | 325 | 1.18e-12 | 67.4 |
| MS.gene33334.t1 | MTR_3g091350 | 23.492 | 315 | 174 | 8 | 1 | 264 | 51 | 349 | 1.25e-12 | 67.4 |
| MS.gene33334.t1 | MTR_2g102570 | 33.628 | 113 | 74 | 1 | 142 | 254 | 223 | 334 | 1.56e-12 | 67.4 |
| MS.gene33334.t1 | MTR_5g048740 | 24.013 | 304 | 179 | 9 | 3 | 261 | 39 | 335 | 4.65e-12 | 65.9 |
| MS.gene33334.t1 | MTR_8g102600 | 26.404 | 178 | 109 | 8 | 102 | 272 | 112 | 274 | 1.64e-11 | 63.5 |
| MS.gene33334.t1 | MTR_2g068840 | 32.520 | 123 | 76 | 3 | 142 | 258 | 225 | 346 | 1.66e-11 | 64.3 |
| MS.gene33334.t1 | MTR_8g102600 | 26.404 | 178 | 109 | 8 | 102 | 272 | 162 | 324 | 1.77e-11 | 63.9 |
| MS.gene33334.t1 | MTR_3g091360 | 35.398 | 113 | 70 | 3 | 142 | 254 | 226 | 335 | 2.29e-11 | 63.5 |
| MS.gene33334.t1 | MTR_6g088665 | 28.188 | 149 | 99 | 4 | 118 | 260 | 182 | 328 | 2.41e-11 | 63.5 |
| MS.gene33334.t1 | MTR_6g088665 | 28.188 | 149 | 99 | 4 | 118 | 260 | 181 | 327 | 2.47e-11 | 63.5 |
| MS.gene33334.t1 | MTR_3g072810 | 31.250 | 112 | 75 | 2 | 142 | 253 | 212 | 321 | 4.66e-11 | 62.8 |
| MS.gene33334.t1 | MTR_7g029655 | 32.800 | 125 | 70 | 5 | 142 | 257 | 235 | 354 | 5.07e-11 | 62.8 |
| MS.gene33334.t1 | MTR_2g070870 | 34.940 | 83 | 53 | 1 | 142 | 224 | 196 | 277 | 5.76e-11 | 62.4 |
| MS.gene33334.t1 | MTR_4g115990 | 32.520 | 123 | 80 | 3 | 142 | 263 | 199 | 319 | 8.19e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33334.t1 | AT1G52820 | 58.307 | 319 | 87 | 4 | 1 | 275 | 1 | 317 | 6.26e-134 | 381 |
| MS.gene33334.t1 | AT4G03070 | 46.178 | 314 | 117 | 4 | 8 | 274 | 13 | 321 | 8.31e-97 | 287 |
| MS.gene33334.t1 | AT1G52820 | 53.361 | 238 | 65 | 4 | 1 | 194 | 1 | 236 | 1.07e-82 | 249 |
| MS.gene33334.t1 | AT1G28030 | 42.122 | 311 | 135 | 6 | 9 | 275 | 13 | 322 | 3.11e-78 | 240 |
| MS.gene33334.t1 | AT1G52790 | 38.585 | 311 | 148 | 3 | 6 | 275 | 2 | 310 | 2.78e-75 | 232 |
| MS.gene33334.t1 | AT1G52800 | 38.585 | 311 | 147 | 5 | 6 | 275 | 7 | 314 | 6.93e-72 | 223 |
| MS.gene33334.t1 | AT1G52810 | 42.657 | 286 | 139 | 4 | 8 | 275 | 11 | 289 | 6.91e-70 | 218 |
| MS.gene33334.t1 | AT1G80320 | 31.902 | 326 | 163 | 7 | 1 | 275 | 1 | 318 | 4.20e-49 | 165 |
| MS.gene33334.t1 | AT1G15540 | 30.061 | 326 | 170 | 9 | 1 | 275 | 1 | 319 | 1.70e-42 | 148 |
| MS.gene33334.t1 | AT1G15540 | 30.061 | 326 | 170 | 9 | 1 | 275 | 1 | 319 | 1.70e-42 | 148 |
| MS.gene33334.t1 | AT1G15540 | 30.061 | 326 | 170 | 9 | 1 | 275 | 4 | 322 | 1.92e-42 | 148 |
| MS.gene33334.t1 | AT1G15540 | 30.061 | 326 | 170 | 9 | 1 | 275 | 8 | 326 | 2.25e-42 | 148 |
| MS.gene33334.t1 | AT4G03050 | 46.715 | 137 | 71 | 2 | 140 | 275 | 272 | 407 | 2.20e-41 | 147 |
| MS.gene33334.t1 | AT4G03050 | 33.721 | 172 | 70 | 3 | 1 | 132 | 1 | 168 | 8.57e-23 | 97.1 |
| MS.gene33334.t1 | AT4G03050 | 46.715 | 137 | 71 | 2 | 140 | 275 | 272 | 407 | 2.20e-41 | 147 |
| MS.gene33334.t1 | AT4G03050 | 33.721 | 172 | 70 | 3 | 1 | 132 | 1 | 168 | 8.57e-23 | 97.1 |
| MS.gene33334.t1 | AT4G23340 | 35.294 | 136 | 84 | 3 | 143 | 275 | 64 | 198 | 3.85e-21 | 89.0 |
| MS.gene33334.t1 | AT4G23340 | 35.294 | 136 | 84 | 3 | 143 | 275 | 182 | 316 | 6.89e-20 | 87.8 |
| MS.gene33334.t1 | AT4G10490 | 26.403 | 303 | 156 | 14 | 9 | 258 | 42 | 330 | 1.09e-19 | 87.8 |
| MS.gene33334.t1 | AT2G36690 | 25.890 | 309 | 169 | 9 | 8 | 267 | 60 | 357 | 3.44e-19 | 86.7 |
| MS.gene33334.t1 | AT2G36690 | 25.890 | 309 | 169 | 9 | 8 | 267 | 60 | 357 | 3.44e-19 | 86.7 |
| MS.gene33334.t1 | AT1G14130 | 26.236 | 263 | 153 | 6 | 27 | 250 | 20 | 280 | 6.48e-19 | 85.1 |
| MS.gene33334.t1 | AT1G50960 | 29.961 | 257 | 136 | 9 | 8 | 224 | 39 | 291 | 1.85e-18 | 84.0 |
| MS.gene33334.t1 | AT1G78550 | 36.364 | 121 | 74 | 3 | 142 | 261 | 148 | 266 | 1.27e-17 | 80.9 |
| MS.gene33334.t1 | AT3G19010 | 24.907 | 269 | 167 | 8 | 8 | 248 | 27 | 288 | 2.69e-17 | 80.5 |
| MS.gene33334.t1 | AT1G78550 | 36.364 | 121 | 74 | 3 | 142 | 261 | 226 | 344 | 2.78e-17 | 80.9 |
| MS.gene33334.t1 | AT1G14120 | 25.704 | 284 | 163 | 5 | 3 | 247 | 2 | 276 | 5.25e-17 | 79.7 |
| MS.gene33334.t1 | AT1G14120 | 25.704 | 284 | 163 | 5 | 3 | 247 | 2 | 276 | 5.25e-17 | 79.7 |
| MS.gene33334.t1 | AT1G14120 | 25.704 | 284 | 163 | 5 | 3 | 247 | 2 | 276 | 5.25e-17 | 79.7 |
| MS.gene33334.t1 | AT5G07200 | 37.008 | 127 | 74 | 4 | 114 | 238 | 213 | 335 | 6.60e-17 | 80.1 |
| MS.gene33334.t1 | AT5G51810 | 29.747 | 158 | 105 | 3 | 115 | 268 | 213 | 368 | 2.01e-16 | 78.6 |
| MS.gene33334.t1 | AT4G21200 | 34.375 | 128 | 82 | 2 | 105 | 232 | 173 | 298 | 2.82e-16 | 77.8 |
| MS.gene33334.t1 | AT5G20550 | 36.000 | 125 | 76 | 4 | 142 | 264 | 220 | 342 | 7.98e-16 | 76.6 |
| MS.gene33334.t1 | AT5G51310 | 34.375 | 128 | 75 | 4 | 143 | 263 | 182 | 307 | 2.17e-15 | 75.1 |
| MS.gene33334.t1 | AT1G44090 | 29.775 | 178 | 109 | 6 | 97 | 272 | 209 | 372 | 2.52e-15 | 75.5 |
| MS.gene33334.t1 | AT1G47990 | 30.370 | 135 | 92 | 2 | 140 | 273 | 186 | 319 | 3.72e-15 | 74.7 |
| MS.gene33334.t1 | AT4G10500 | 23.986 | 296 | 171 | 10 | 9 | 258 | 44 | 331 | 4.69e-15 | 74.7 |
| MS.gene33334.t1 | AT4G25420 | 32.258 | 124 | 82 | 2 | 115 | 238 | 215 | 336 | 9.75e-15 | 73.9 |
| MS.gene33334.t1 | AT1G78440 | 28.324 | 173 | 108 | 4 | 96 | 261 | 147 | 310 | 1.24e-14 | 73.2 |
| MS.gene33334.t1 | AT4G16765 | 31.875 | 160 | 93 | 5 | 102 | 255 | 88 | 237 | 1.28e-14 | 72.0 |
| MS.gene33334.t1 | AT4G16765 | 31.875 | 160 | 93 | 5 | 102 | 255 | 88 | 237 | 1.28e-14 | 72.0 |
| MS.gene33334.t1 | AT4G16765 | 31.875 | 160 | 93 | 5 | 102 | 255 | 88 | 237 | 1.28e-14 | 72.0 |
| MS.gene33334.t1 | AT3G19010 | 31.111 | 135 | 87 | 3 | 115 | 248 | 189 | 318 | 1.28e-14 | 73.2 |
| MS.gene33334.t1 | AT3G19010 | 31.111 | 135 | 87 | 3 | 115 | 248 | 189 | 318 | 1.28e-14 | 73.2 |
| MS.gene33334.t1 | AT1G02400 | 31.667 | 120 | 80 | 2 | 141 | 259 | 197 | 315 | 1.59e-14 | 72.8 |
| MS.gene33334.t1 | AT3G13610 | 36.975 | 119 | 71 | 4 | 142 | 258 | 230 | 346 | 2.27e-14 | 72.8 |
| MS.gene33334.t1 | AT1G30040 | 27.219 | 169 | 111 | 3 | 96 | 261 | 161 | 320 | 2.45e-14 | 72.4 |
| MS.gene33334.t1 | AT5G05600 | 26.129 | 310 | 177 | 10 | 3 | 263 | 53 | 359 | 2.55e-14 | 72.4 |
| MS.gene33334.t1 | AT3G21420 | 32.468 | 154 | 99 | 4 | 113 | 263 | 201 | 352 | 3.74e-14 | 72.0 |
| MS.gene33334.t1 | AT4G16765 | 32.653 | 147 | 83 | 5 | 102 | 242 | 88 | 224 | 1.23e-13 | 68.9 |
| MS.gene33334.t1 | AT2G34555 | 28.082 | 146 | 101 | 3 | 120 | 262 | 173 | 317 | 2.32e-13 | 69.7 |
| MS.gene33334.t1 | AT1G15550 | 25.333 | 300 | 162 | 8 | 9 | 259 | 57 | 343 | 2.54e-13 | 69.7 |
| MS.gene33334.t1 | AT3G51240 | 34.677 | 124 | 77 | 4 | 133 | 255 | 120 | 240 | 4.36e-13 | 68.2 |
| MS.gene33334.t1 | AT1G55290 | 32.203 | 118 | 78 | 2 | 142 | 258 | 230 | 346 | 4.53e-13 | 68.9 |
| MS.gene33334.t1 | AT2G44800 | 23.473 | 311 | 187 | 10 | 1 | 267 | 45 | 348 | 4.89e-13 | 68.6 |
| MS.gene33334.t1 | AT2G38240 | 26.246 | 301 | 161 | 11 | 3 | 253 | 42 | 331 | 5.08e-13 | 68.6 |
| MS.gene33334.t1 | AT1G60980 | 29.487 | 156 | 107 | 3 | 114 | 268 | 214 | 367 | 6.13e-13 | 68.6 |
| MS.gene33334.t1 | AT1G49390 | 33.600 | 125 | 78 | 4 | 142 | 264 | 141 | 262 | 7.13e-13 | 67.4 |
| MS.gene33334.t1 | AT3G51240 | 34.677 | 124 | 77 | 4 | 133 | 255 | 204 | 324 | 7.87e-13 | 68.2 |
| MS.gene33334.t1 | AT1G80340 | 32.000 | 125 | 81 | 2 | 142 | 266 | 220 | 340 | 1.34e-12 | 67.4 |
| MS.gene33334.t1 | AT4G16765 | 35.897 | 117 | 69 | 3 | 143 | 255 | 77 | 191 | 1.42e-12 | 65.5 |
| MS.gene33334.t1 | AT1G49390 | 33.600 | 125 | 78 | 4 | 142 | 264 | 220 | 341 | 1.62e-12 | 67.0 |
| MS.gene33334.t1 | AT3G19000 | 32.353 | 136 | 90 | 2 | 120 | 254 | 195 | 329 | 3.12e-12 | 66.2 |
| MS.gene33334.t1 | AT5G43935 | 24.221 | 289 | 163 | 10 | 6 | 258 | 16 | 284 | 3.17e-12 | 65.9 |
| MS.gene33334.t1 | AT5G20400 | 32.258 | 124 | 81 | 2 | 142 | 264 | 220 | 341 | 4.26e-12 | 65.9 |
| MS.gene33334.t1 | AT5G63595 | 24.583 | 240 | 145 | 7 | 5 | 218 | 21 | 250 | 4.40e-12 | 65.5 |
| MS.gene33334.t1 | AT1G80330 | 31.356 | 118 | 79 | 2 | 142 | 258 | 222 | 338 | 4.64e-12 | 65.9 |
| MS.gene33334.t1 | AT5G54000 | 32.895 | 152 | 97 | 4 | 115 | 264 | 114 | 262 | 5.53e-12 | 65.1 |
| MS.gene33334.t1 | AT5G54000 | 32.895 | 152 | 97 | 4 | 115 | 264 | 194 | 342 | 8.65e-12 | 65.1 |
| MS.gene33334.t1 | AT1G35190 | 23.950 | 238 | 139 | 8 | 35 | 232 | 31 | 266 | 9.45e-12 | 64.7 |
| MS.gene33334.t1 | AT3G46500 | 23.750 | 320 | 175 | 10 | 9 | 272 | 17 | 323 | 1.15e-11 | 64.3 |
| MS.gene33334.t1 | AT2G19590 | 30.994 | 171 | 98 | 7 | 94 | 261 | 122 | 275 | 1.35e-11 | 63.9 |
| MS.gene33334.t1 | AT2G19590 | 30.994 | 171 | 98 | 7 | 94 | 261 | 137 | 290 | 1.47e-11 | 63.9 |
| MS.gene33334.t1 | AT4G21690 | 32.231 | 121 | 76 | 3 | 142 | 259 | 221 | 338 | 1.56e-11 | 64.3 |
| MS.gene33334.t1 | AT3G11180 | 35.099 | 151 | 92 | 6 | 127 | 275 | 253 | 399 | 1.62e-11 | 64.3 |
| MS.gene33334.t1 | AT3G11180 | 36.029 | 136 | 82 | 5 | 127 | 260 | 253 | 385 | 4.11e-11 | 63.2 |
| MS.gene33334.t1 | AT3G60290 | 29.412 | 153 | 104 | 4 | 105 | 256 | 188 | 337 | 4.66e-11 | 62.8 |
| MS.gene33334.t1 | AT5G63600 | 30.159 | 126 | 85 | 3 | 121 | 245 | 179 | 302 | 5.50e-11 | 62.4 |
| MS.gene33334.t1 | AT3G46500 | 31.148 | 122 | 77 | 4 | 126 | 242 | 42 | 161 | 7.38e-11 | 60.5 |
| MS.gene33334.t1 | AT3G46480 | 31.250 | 112 | 70 | 4 | 126 | 232 | 138 | 247 | 7.89e-11 | 61.6 |
Find 67 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAACCCTCCACTTGATTT+TGG | 0.172318 | 4.4:+87851764 | None:intergenic |
| CATAACTCGGAGAAGATAAT+TGG | 0.235118 | 4.4:+87851867 | None:intergenic |
| CTCTTCTATTGAAGCAAATA+TGG | 0.247910 | 4.4:+87852496 | None:intergenic |
| CAAACAAGTGGCACAAAATT+AGG | 0.254155 | 4.4:-87851829 | MS.gene33334:CDS |
| TTTATAATGTACCCTTCTTT+GGG | 0.274338 | 4.4:+87851337 | None:intergenic |
| AAGTATTATTACACTGAAAA+AGG | 0.296469 | 4.4:-87851244 | MS.gene33334:CDS |
| AGCTACAAGCCTTCTTCTTC+AGG | 0.296513 | 4.4:-87851712 | MS.gene33334:CDS |
| AGGAACACCCTTTGCTCTTT+AGG | 0.302565 | 4.4:-87851291 | MS.gene33334:CDS |
| TTATGACCAAAGATGGAAAA+TGG | 0.328291 | 4.4:-87851738 | MS.gene33334:CDS |
| TAACTTCCAATTGGGACCTT+TGG | 0.342001 | 4.4:+87852604 | None:intergenic |
| AGGTTATTGAAGTCAATTAT+TGG | 0.351381 | 4.4:+87852638 | None:intergenic |
| AAATCAAGTGGAGGGTTTAG+AGG | 0.368484 | 4.4:-87851761 | MS.gene33334:CDS |
| AAGTCAATTATTGGAAGCTT+TGG | 0.372595 | 4.4:+87852647 | None:intergenic |
| GGCTGCATTCGCCGTTTCAT+CGG | 0.372856 | 4.4:-87851411 | MS.gene33334:CDS |
| GGACTTCACTAACTTCCAAT+TGG | 0.381616 | 4.4:+87852595 | None:intergenic |
| TCCTCATCCACCAGCTCCTC+AGG | 0.394498 | 4.4:+87851310 | None:intergenic |
| TGAGTAGCTTGGTTTGTAAA+GGG | 0.399695 | 4.4:+87852462 | None:intergenic |
| TTTAGGTGTTGAAAAGTACT+TGG | 0.418069 | 4.4:-87851908 | MS.gene33334:intron |
| TACAAGGCACTAGTAGAGTA+TGG | 0.427395 | 4.4:-87852566 | MS.gene33334:CDS |
| CTACTAGTGCCTTGTAGACT+TGG | 0.427530 | 4.4:+87852573 | None:intergenic |
| AAAGTGGAACCATAGGATAT+TGG | 0.429700 | 4.4:+87852405 | None:intergenic |
| TCCTGAGGAGCTGGTGGATG+AGG | 0.442309 | 4.4:-87851311 | MS.gene33334:CDS |
| TTAGAGGTTATGACCAAAGA+TGG | 0.443286 | 4.4:-87851745 | MS.gene33334:CDS |
| TTGAGTAGCTTGGTTTGTAA+AGG | 0.444697 | 4.4:+87852461 | None:intergenic |
| GCATAGCAAATTGATCCCTT+TGG | 0.445803 | 4.4:+87851221 | None:intergenic |
| AGAAATTCAACATGGTCATA+AGG | 0.455564 | 4.4:+87851268 | None:intergenic |
| AATGAGGCAAGATATTCAAC+AGG | 0.456964 | 4.4:-87851373 | MS.gene33334:CDS |
| GACTTCACTAACTTCCAATT+GGG | 0.457718 | 4.4:+87852596 | None:intergenic |
| TGGAAGCCAAAGGTCCCAAT+TGG | 0.459271 | 4.4:-87852610 | MS.gene33334:CDS |
| GCTGCATTCGCCGTTTCATC+GGG | 0.461406 | 4.4:-87851410 | MS.gene33334:CDS |
| CTCATCATCACCCGATGAAA+CGG | 0.468077 | 4.4:+87851400 | None:intergenic |
| CTTAGACACATTGAGTAGCT+TGG | 0.469557 | 4.4:+87852451 | None:intergenic |
| ATGGCTTTGCGAAGGTCTAA+AGG | 0.489454 | 4.4:+87852515 | None:intergenic |
| TATAAAAGCTCCTGAGGAGC+TGG | 0.492315 | 4.4:-87851320 | MS.gene33334:CDS |
| AAGCCTTATCATGGTTATGT+TGG | 0.495147 | 4.4:-87852428 | MS.gene33334:CDS |
| GGCCTTTGTATTTCATAACT+CGG | 0.505784 | 4.4:+87851854 | None:intergenic |
| TTATGTTGGCCAATATCCTA+TGG | 0.513696 | 4.4:-87852414 | MS.gene33334:CDS |
| GACCTTTGGCTTCCAAGTTG+AGG | 0.513817 | 4.4:+87852618 | None:intergenic |
| TGGCCAACATAACCATGATA+AGG | 0.515439 | 4.4:+87852425 | None:intergenic |
| TTGTTCTCTATCCCCAAAGA+AGG | 0.517620 | 4.4:-87851349 | MS.gene33334:CDS |
| TGACTTCAATAACCTCAACT+TGG | 0.518399 | 4.4:-87852630 | MS.gene33334:CDS |
| CATAAGGCCTAAAGAGCAAA+GGG | 0.533538 | 4.4:+87851284 | None:intergenic |
| ACAAAACTGCCTGAAGAAGA+AGG | 0.535328 | 4.4:+87851703 | None:intergenic |
| TTTGCTATGCACACTTATTG+TGG | 0.535358 | 4.4:-87851208 | MS.gene33334:CDS |
| GTGTCTAAGAAGCCTTATCA+TGG | 0.546828 | 4.4:-87852437 | MS.gene33334:CDS |
| AGTGAAGTCCCAAGTCTACA+AGG | 0.549683 | 4.4:-87852582 | MS.gene33334:CDS |
| TGCAGGCATGGTCAAACGGA+AGG | 0.550290 | 4.4:-87851432 | MS.gene33334:intron |
| AAAAGCTCCTGAGGAGCTGG+TGG | 0.553359 | 4.4:-87851317 | MS.gene33334:CDS |
| TTGTACCAAAATCAAGTGGA+GGG | 0.578480 | 4.4:-87851769 | MS.gene33334:CDS |
| AGGTGTTGAAAAGTACTTGG+AGG | 0.581664 | 4.4:-87851905 | MS.gene33334:CDS |
| TACTAGTGCCTTGTAGACTT+GGG | 0.582523 | 4.4:+87852574 | None:intergenic |
| TTTCATCGGGTGATGATGAG+TGG | 0.601192 | 4.4:-87851397 | MS.gene33334:CDS |
| TCATAAGGCCTAAAGAGCAA+AGG | 0.602630 | 4.4:+87851283 | None:intergenic |
| CTCCGAGTTATGAAATACAA+AGG | 0.607802 | 4.4:-87851856 | MS.gene33334:CDS |
| TTATAATGTACCCTTCTTTG+GGG | 0.608444 | 4.4:+87851338 | None:intergenic |
| GTACATTATAAAAGCTCCTG+AGG | 0.610724 | 4.4:-87851326 | MS.gene33334:CDS |
| CATATTGTACCAAAATCAAG+TGG | 0.618110 | 4.4:-87851773 | MS.gene33334:CDS |
| TACAAAGGCCCTCAAACAAG+TGG | 0.618602 | 4.4:-87851841 | MS.gene33334:CDS |
| ATTGTACCAAAATCAAGTGG+AGG | 0.620577 | 4.4:-87851770 | MS.gene33334:CDS |
| GGTGATGATGAGTGGAAATG+AGG | 0.625943 | 4.4:-87851389 | MS.gene33334:CDS |
| AAGCAAATATGGCTTTGCGA+AGG | 0.626163 | 4.4:+87852507 | None:intergenic |
| AACCTCAACTTGGAAGCCAA+AGG | 0.627785 | 4.4:-87852620 | MS.gene33334:CDS |
| AATTATTGGAAGCTTTGGAG+TGG | 0.639485 | 4.4:+87852652 | None:intergenic |
| TCTTGTCACTATGTGTGCTG+AGG | 0.642869 | 4.4:+87851806 | None:intergenic |
| TGTTCTCTATCCCCAAAGAA+GGG | 0.657730 | 4.4:-87851348 | MS.gene33334:CDS |
| AATACTTGAGAAATTCAACA+TGG | 0.726391 | 4.4:+87851260 | None:intergenic |
| ATGAGGCAAGATATTCAACA+GGG | 0.749856 | 4.4:-87851372 | MS.gene33334:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAACAAAATAATAAG+GGG | + | chr4.4:87851860-87851879 | None:intergenic | 10.0% |
| !!! | TTAATAATTAGTTTTCGATA+AGG | + | chr4.4:87852233-87852252 | None:intergenic | 15.0% |
| !! | AAGTATTATTACACTGAAAA+AGG | - | chr4.4:87852622-87852641 | MS.gene33334:CDS | 20.0% |
| !! | TATCAAATACTTTGATATCT+CGG | + | chr4.4:87852328-87852347 | None:intergenic | 20.0% |
| !!! | AATTATTAGGAAGATGATTT+TGG | - | chr4.4:87851931-87851950 | MS.gene33334:intron | 20.0% |
| !!! | ATCAAAACAAGTAACTTTTT+AGG | + | chr4.4:87851581-87851600 | None:intergenic | 20.0% |
| !!! | CAATGTTTAACATTCTTTTA+TGG | - | chr4.4:87851623-87851642 | MS.gene33334:intron | 20.0% |
| !!! | TTTTTAGGTACCTAAAATTT+TGG | + | chr4.4:87851566-87851585 | None:intergenic | 20.0% |
| ! | AAGAGTTGGATCAAATTATT+AGG | - | chr4.4:87851918-87851937 | MS.gene33334:intron | 25.0% |
| ! | AATACTTGAGAAATTCAACA+TGG | + | chr4.4:87852609-87852628 | None:intergenic | 25.0% |
| ! | AATTTGATCCCTACAATTAT+AGG | - | chr4.4:87851656-87851675 | MS.gene33334:intron | 25.0% |
| ! | AGGTTATTGAAGTCAATTAT+TGG | + | chr4.4:87851231-87851250 | None:intergenic | 25.0% |
| ! | ATCAAATACTTTGATATCTC+GGG | + | chr4.4:87852327-87852346 | None:intergenic | 25.0% |
| ! | ATTTGATCCCTACAATTATA+GGG | - | chr4.4:87851657-87851676 | MS.gene33334:intron | 25.0% |
| ! | TTTATAATGTACCCTTCTTT+GGG | + | chr4.4:87852532-87852551 | None:intergenic | 25.0% |
| !! | TATCAAAGTATTTGATATCG+TGG | - | chr4.4:87852331-87852350 | MS.gene33334:intron | 25.0% |
| !! | TTTTATAATGTACCCTTCTT+TGG | + | chr4.4:87852533-87852552 | None:intergenic | 25.0% |
| !!! | AATTAGTTTTCGATAAGGAA+TGG | + | chr4.4:87852228-87852247 | None:intergenic | 25.0% |
| AAGTCAATTATTGGAAGCTT+TGG | + | chr4.4:87851222-87851241 | None:intergenic | 30.0% | |
| AGAAATATAAGTCCTCCAAA+TGG | + | chr4.4:87851829-87851848 | None:intergenic | 30.0% | |
| AGAAATTCAACATGGTCATA+AGG | + | chr4.4:87852601-87852620 | None:intergenic | 30.0% | |
| ATTATTGTGAATGTGGCTTA+AGG | + | chr4.4:87852300-87852319 | None:intergenic | 30.0% | |
| CATATTGTACCAAAATCAAG+TGG | - | chr4.4:87852093-87852112 | MS.gene33334:intron | 30.0% | |
| CTCTTCTATTGAAGCAAATA+TGG | + | chr4.4:87851373-87851392 | None:intergenic | 30.0% | |
| TTATAATGTACCCTTCTTTG+GGG | + | chr4.4:87852531-87852550 | None:intergenic | 30.0% | |
| TTATGACCAAAGATGGAAAA+TGG | - | chr4.4:87852128-87852147 | MS.gene33334:intron | 30.0% | |
| TTGTTAATTGTGATTGCATC+AGG | - | chr4.4:87852272-87852291 | MS.gene33334:intron | 30.0% | |
| TTTCGATAAGGAATGGTTAA+TGG | + | chr4.4:87852221-87852240 | None:intergenic | 30.0% | |
| ! | CAGATGGAAACCAAAATTTT+AGG | - | chr4.4:87851553-87851572 | MS.gene33334:intron | 30.0% |
| ! | TCATATTAGAGCATCTCTAA+TGG | - | chr4.4:87851751-87851770 | MS.gene33334:CDS | 30.0% |
| ! | TCGTGTTATATGAATTTTGC+AGG | - | chr4.4:87852417-87852436 | MS.gene33334:CDS | 30.0% |
| ! | TTATATGAATTTTGCAGGCA+TGG | - | chr4.4:87852422-87852441 | MS.gene33334:CDS | 30.0% |
| !! | AAGATGATTTTGGAGAGTTT+AGG | - | chr4.4:87851941-87851960 | MS.gene33334:intron | 30.0% |
| !! | CACTTGATTTTGGTACAATA+TGG | + | chr4.4:87852095-87852114 | None:intergenic | 30.0% |
| !! | TTTAGGTGTTGAAAAGTACT+TGG | - | chr4.4:87851958-87851977 | MS.gene33334:intron | 30.0% |
| !!! | CTAAAATTTTGGTTTCCATC+TGG | + | chr4.4:87851555-87851574 | None:intergenic | 30.0% |
| AAAGTGGAACCATAGGATAT+TGG | + | chr4.4:87851464-87851483 | None:intergenic | 35.0% | |
| AAGCCACATTCACAATAATG+TGG | - | chr4.4:87852301-87852320 | MS.gene33334:intron | 35.0% | |
| AATGAGGCAAGATATTCAAC+AGG | - | chr4.4:87852493-87852512 | MS.gene33334:CDS | 35.0% | |
| ATGAGGCAAGATATTCAACA+GGG | - | chr4.4:87852494-87852513 | MS.gene33334:CDS | 35.0% | |
| ATTACACTGAAAAAGGCCAA+AGG | - | chr4.4:87852629-87852648 | MS.gene33334:CDS | 35.0% | |
| ATTGCTTAGTTAACGCTTCT+GGG | - | chr4.4:87851599-87851618 | MS.gene33334:intron | 35.0% | |
| ATTGTACCAAAATCAAGTGG+AGG | - | chr4.4:87852096-87852115 | MS.gene33334:intron | 35.0% | |
| CAAACAAGTGGCACAAAATT+AGG | - | chr4.4:87852037-87852056 | MS.gene33334:intron | 35.0% | |
| CATAACTCGGAGAAGATAAT+TGG | + | chr4.4:87852002-87852021 | None:intergenic | 35.0% | |
| CTCCGAGTTATGAAATACAA+AGG | - | chr4.4:87852010-87852029 | MS.gene33334:intron | 35.0% | |
| GACTTCACTAACTTCCAATT+GGG | + | chr4.4:87851273-87851292 | None:intergenic | 35.0% | |
| GATAGTGCCCTATAATTGTA+GGG | + | chr4.4:87851667-87851686 | None:intergenic | 35.0% | |
| GGCCTTTGTATTTCATAACT+CGG | + | chr4.4:87852015-87852034 | None:intergenic | 35.0% | |
| GTACATTATAAAAGCTCCTG+AGG | - | chr4.4:87852540-87852559 | MS.gene33334:CDS | 35.0% | |
| TGACTTCAATAACCTCAACT+TGG | - | chr4.4:87851236-87851255 | MS.gene33334:CDS | 35.0% | |
| TTACACTGAAAAAGGCCAAA+GGG | - | chr4.4:87852630-87852649 | MS.gene33334:CDS | 35.0% | |
| TTAGAGGTTATGACCAAAGA+TGG | - | chr4.4:87852121-87852140 | MS.gene33334:intron | 35.0% | |
| TTATGTTGGCCAATATCCTA+TGG | - | chr4.4:87851452-87851471 | MS.gene33334:intron | 35.0% | |
| TTGTACCAAAATCAAGTGGA+GGG | - | chr4.4:87852097-87852116 | MS.gene33334:intron | 35.0% | |
| ! | AAGCCTTATCATGGTTATGT+TGG | - | chr4.4:87851438-87851457 | MS.gene33334:intron | 35.0% |
| ! | ATTATAGGGCACTATCGATT+TGG | - | chr4.4:87851671-87851690 | MS.gene33334:intron | 35.0% |
| ! | GCTTATCCATTTTCCATCTT+TGG | + | chr4.4:87852137-87852156 | None:intergenic | 35.0% |
| ! | TTTGCTATGCACACTTATTG+TGG | - | chr4.4:87852658-87852677 | MS.gene33334:CDS | 35.0% |
| !! | AATTATTGGAAGCTTTGGAG+TGG | + | chr4.4:87851217-87851236 | None:intergenic | 35.0% |
| !! | TGAGTAGCTTGGTTTGTAAA+GGG | + | chr4.4:87851407-87851426 | None:intergenic | 35.0% |
| !! | TTGAGTAGCTTGGTTTGTAA+AGG | + | chr4.4:87851408-87851427 | None:intergenic | 35.0% |
| !!! | AATTTTGTGCCACTTGTTTG+AGG | + | chr4.4:87852037-87852056 | None:intergenic | 35.0% |
| !!! | ATTTTGTGCCACTTGTTTGA+GGG | + | chr4.4:87852036-87852055 | None:intergenic | 35.0% |
| AAATCAAGTGGAGGGTTTAG+AGG | - | chr4.4:87852105-87852124 | MS.gene33334:intron | 40.0% | |
| ACAAAACTGCCTGAAGAAGA+AGG | + | chr4.4:87852166-87852185 | None:intergenic | 40.0% | |
| ACAGTATGACCAACAACTTG+TGG | - | chr4.4:87851529-87851548 | MS.gene33334:intron | 40.0% | |
| ATGCATGTGTGACTACGATT+TGG | + | chr4.4:87852358-87852377 | None:intergenic | 40.0% | |
| CATAAGGCCTAAAGAGCAAA+GGG | + | chr4.4:87852585-87852604 | None:intergenic | 40.0% | |
| CCTTAACAAGTGTCACCATT+TGG | - | chr4.4:87851811-87851830 | MS.gene33334:CDS | 40.0% | |
| CGATAGTGCCCTATAATTGT+AGG | + | chr4.4:87851668-87851687 | None:intergenic | 40.0% | |
| CTCTCAAAAAGTGGAACCAT+AGG | + | chr4.4:87851471-87851490 | None:intergenic | 40.0% | |
| CTCTGATGAGCTAAAAGAGT+TGG | - | chr4.4:87851904-87851923 | MS.gene33334:CDS | 40.0% | |
| CTTAGACACATTGAGTAGCT+TGG | + | chr4.4:87851418-87851437 | None:intergenic | 40.0% | |
| GATTGCTTAGTTAACGCTTC+TGG | - | chr4.4:87851598-87851617 | MS.gene33334:intron | 40.0% | |
| GCATAGCAAATTGATCCCTT+TGG | + | chr4.4:87852648-87852667 | None:intergenic | 40.0% | |
| GGACTTCACTAACTTCCAAT+TGG | + | chr4.4:87851274-87851293 | None:intergenic | 40.0% | |
| TAACAAGTGTCACCATTTGG+AGG | - | chr4.4:87851814-87851833 | MS.gene33334:CDS | 40.0% | |
| TAACTTCCAATTGGGACCTT+TGG | + | chr4.4:87851265-87851284 | None:intergenic | 40.0% | |
| TACTAGTGCCTTGTAGACTT+GGG | + | chr4.4:87851295-87851314 | None:intergenic | 40.0% | |
| TCATAAGGCCTAAAGAGCAA+AGG | + | chr4.4:87852586-87852605 | None:intergenic | 40.0% | |
| TCTAATGGTAGTCTTTCGAG+AGG | - | chr4.4:87851766-87851785 | MS.gene33334:CDS | 40.0% | |
| TGCATGTGTGACTACGATTT+GGG | + | chr4.4:87852357-87852376 | None:intergenic | 40.0% | |
| TGGCCAACATAACCATGATA+AGG | + | chr4.4:87851444-87851463 | None:intergenic | 40.0% | |
| TGTTCTCTATCCCCAAAGAA+GGG | - | chr4.4:87852518-87852537 | MS.gene33334:CDS | 40.0% | |
| TTGTTCTCTATCCCCAAAGA+AGG | - | chr4.4:87852517-87852536 | MS.gene33334:CDS | 40.0% | |
| ! | AAGCAAATATGGCTTTGCGA+AGG | + | chr4.4:87851362-87851381 | None:intergenic | 40.0% |
| ! | ATTTTGCAGGCATGGTCAAA+CGG | - | chr4.4:87852430-87852449 | MS.gene33334:CDS | 40.0% |
| ! | CCAAATGGTGACACTTGTTA+AGG | + | chr4.4:87851814-87851833 | None:intergenic | 40.0% |
| ! | CTAAACCCTCCACTTGATTT+TGG | + | chr4.4:87852105-87852124 | None:intergenic | 40.0% |
| ! | GTGTCTAAGAAGCCTTATCA+TGG | - | chr4.4:87851429-87851448 | MS.gene33334:CDS | 40.0% |
| ! | TACAAGGCACTAGTAGAGTA+TGG | - | chr4.4:87851300-87851319 | MS.gene33334:CDS | 40.0% |
| !! | AGGTGTTGAAAAGTACTTGG+AGG | - | chr4.4:87851961-87851980 | MS.gene33334:intron | 40.0% |
| !! | GGCAGTTTTGTAGCAATGAT+TGG | - | chr4.4:87852175-87852194 | MS.gene33334:intron | 40.0% |
| !!! | CTCTTTTAGCTCATCAGAGA+AGG | + | chr4.4:87851903-87851922 | None:intergenic | 40.0% |
| !!! | GTTCCACTTTTTGAGAGCAT+GGG | - | chr4.4:87851474-87851493 | MS.gene33334:intron | 40.0% |
| AACCTCAACTTGGAAGCCAA+AGG | - | chr4.4:87851246-87851265 | MS.gene33334:CDS | 45.0% | |
| AGCTACAAGCCTTCTTCTTC+AGG | - | chr4.4:87852154-87852173 | MS.gene33334:intron | 45.0% | |
| AGGAACACCCTTTGCTCTTT+AGG | - | chr4.4:87852575-87852594 | MS.gene33334:CDS | 45.0% | |
| AGTGAAGTCCCAAGTCTACA+AGG | - | chr4.4:87851284-87851303 | MS.gene33334:CDS | 45.0% | |
| ATGCCCATGCTCTCAAAAAG+TGG | + | chr4.4:87851480-87851499 | None:intergenic | 45.0% | |
| CTACTAGTGCCTTGTAGACT+TGG | + | chr4.4:87851296-87851315 | None:intergenic | 45.0% | |
| CTCATCATCACCCGATGAAA+CGG | + | chr4.4:87852469-87852488 | None:intergenic | 45.0% | |
| GGGCCACATTATTGTGAATG+TGG | + | chr4.4:87852307-87852326 | None:intergenic | 45.0% | |
| TACAAAGGCCCTCAAACAAG+TGG | - | chr4.4:87852025-87852044 | MS.gene33334:intron | 45.0% | |
| TATAAAAGCTCCTGAGGAGC+TGG | - | chr4.4:87852546-87852565 | MS.gene33334:CDS | 45.0% | |
| TCTTGTCACTATGTGTGCTG+AGG | + | chr4.4:87852063-87852082 | None:intergenic | 45.0% | |
| ! | ATGGCTTTGCGAAGGTCTAA+AGG | + | chr4.4:87851354-87851373 | None:intergenic | 45.0% |
| ! | GGTGATGATGAGTGGAAATG+AGG | - | chr4.4:87852477-87852496 | MS.gene33334:CDS | 45.0% |
| ! | TTTCATCGGGTGATGATGAG+TGG | - | chr4.4:87852469-87852488 | MS.gene33334:CDS | 45.0% |
| !! | TAGGGCACTATCGATTTGGA+TGG | - | chr4.4:87851675-87851694 | MS.gene33334:intron | 45.0% |
| !!! | GGTTCCACTTTTTGAGAGCA+TGG | - | chr4.4:87851473-87851492 | MS.gene33334:intron | 45.0% |
| !! | AAAATTAAAACAAAATAATA+AGG | + | chr4.4:87851862-87851881 | None:intergenic | 5.0% |
| !! | AAACTAATTATTAATTATTA+AGG | - | chr4.4:87852239-87852258 | MS.gene33334:intron | 5.0% |
| !! | AAATTAAAACAAAATAATAA+GGG | + | chr4.4:87851861-87851880 | None:intergenic | 5.0% |
| ACCAACAACTTGTGGCCAGA+TGG | - | chr4.4:87851537-87851556 | MS.gene33334:intron | 50.0% | |
| TCCATCTGGCCACAAGTTGT+TGG | + | chr4.4:87851541-87851560 | None:intergenic | 50.0% | |
| TGGAAGCCAAAGGTCCCAAT+TGG | - | chr4.4:87851256-87851275 | MS.gene33334:CDS | 50.0% | |
| ! | GACCTTTGGCTTCCAAGTTG+AGG | + | chr4.4:87851251-87851270 | None:intergenic | 50.0% |
| AAAAGCTCCTGAGGAGCTGG+TGG | - | chr4.4:87852549-87852568 | MS.gene33334:CDS | 55.0% | |
| GCTGCATTCGCCGTTTCATC+GGG | - | chr4.4:87852456-87852475 | MS.gene33334:CDS | 55.0% | |
| GGCTGCATTCGCCGTTTCAT+CGG | - | chr4.4:87852455-87852474 | MS.gene33334:CDS | 55.0% | |
| TGCAGGCATGGTCAAACGGA+AGG | - | chr4.4:87852434-87852453 | MS.gene33334:CDS | 55.0% | |
| TCCTCATCCACCAGCTCCTC+AGG | + | chr4.4:87852559-87852578 | None:intergenic | 60.0% | |
| ! | TCCTGAGGAGCTGGTGGATG+AGG | - | chr4.4:87852555-87852574 | MS.gene33334:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 87851201 | 87852687 | 87851201 | ID=MS.gene33334 |
| chr4.4 | mRNA | 87851201 | 87852687 | 87851201 | ID=MS.gene33334.t1;Parent=MS.gene33334 |
| chr4.4 | exon | 87852357 | 87852687 | 87852357 | ID=MS.gene33334.t1.exon1;Parent=MS.gene33334.t1 |
| chr4.4 | CDS | 87852357 | 87852687 | 87852357 | ID=cds.MS.gene33334.t1;Parent=MS.gene33334.t1 |
| chr4.4 | exon | 87851678 | 87851925 | 87851678 | ID=MS.gene33334.t1.exon2;Parent=MS.gene33334.t1 |
| chr4.4 | CDS | 87851678 | 87851925 | 87851678 | ID=cds.MS.gene33334.t1;Parent=MS.gene33334.t1 |
| chr4.4 | exon | 87851201 | 87851449 | 87851201 | ID=MS.gene33334.t1.exon3;Parent=MS.gene33334.t1 |
| chr4.4 | CDS | 87851201 | 87851449 | 87851201 | ID=cds.MS.gene33334.t1;Parent=MS.gene33334.t1 |
| Gene Sequence |
| Protein sequence |
