Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33341.t1 | XP_013454727.1 | 91.4 | 476 | 27 | 2 | 7 | 471 | 49 | 521 | 2.10E-233 | 818.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33341.t1 | Q9SEX2 | 74.7 | 475 | 113 | 3 | 7 | 474 | 44 | 518 | 2.7e-189 | 663.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33341.t1 | A0A072UI08 | 91.4 | 476 | 27 | 2 | 7 | 471 | 49 | 521 | 1.5e-233 | 818.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene33341 | MS.gene58365 | PPI |
MS.gene33341 | MS.gene71874 | PPI |
MS.gene33341 | MS.gene068635 | PPI |
MS.gene33341 | MS.gene059032 | PPI |
MS.gene069168 | MS.gene33341 | PPI |
MS.gene33341 | MS.gene049080 | PPI |
MS.gene33341 | MS.gene027846 | PPI |
MS.gene33341 | MS.gene060690 | PPI |
MS.gene015797 | MS.gene33341 | PPI |
MS.gene33341 | MS.gene05876 | PPI |
MS.gene015792 | MS.gene33341 | PPI |
MS.gene33341 | MS.gene053443 | PPI |
MS.gene33341 | MS.gene027844 | PPI |
MS.gene33341 | MS.gene073888 | PPI |
MS.gene33341 | MS.gene94817 | PPI |
MS.gene33341 | MS.gene059767 | PPI |
MS.gene53517 | MS.gene33341 | PPI |
MS.gene060688 | MS.gene33341 | PPI |
MS.gene33341 | MS.gene71248 | PPI |
MS.gene33341 | MS.gene05950 | PPI |
MS.gene33341 | MS.gene038038 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33341.t1 | MTR_4g011810 | 95.560 | 473 | 13 | 1 | 7 | 471 | 49 | 521 | 0.0 | 911 |
MS.gene33341.t1 | MTR_4g096870 | 48.929 | 280 | 133 | 4 | 177 | 454 | 104 | 375 | 2.62e-87 | 278 |
MS.gene33341.t1 | MTR_7g018380 | 86.875 | 160 | 21 | 0 | 474 | 633 | 524 | 683 | 2.63e-87 | 287 |
MS.gene33341.t1 | MTR_8g075040 | 86.875 | 160 | 21 | 0 | 474 | 633 | 575 | 734 | 9.44e-87 | 287 |
MS.gene33341.t1 | MTR_1g066620 | 85.000 | 160 | 24 | 0 | 474 | 633 | 370 | 529 | 1.57e-85 | 278 |
MS.gene33341.t1 | MTR_2g086160 | 42.462 | 325 | 152 | 5 | 175 | 471 | 112 | 429 | 1.68e-81 | 264 |
MS.gene33341.t1 | MTR_4g053350 | 42.089 | 316 | 151 | 4 | 181 | 471 | 116 | 424 | 8.35e-81 | 262 |
MS.gene33341.t1 | MTR_4g053350 | 42.089 | 316 | 151 | 4 | 181 | 471 | 116 | 424 | 1.24e-80 | 261 |
MS.gene33341.t1 | MTR_2g086160 | 50.413 | 242 | 108 | 4 | 175 | 412 | 112 | 345 | 1.66e-78 | 253 |
MS.gene33341.t1 | MTR_6g023875 | 42.000 | 300 | 161 | 4 | 174 | 471 | 364 | 652 | 6.33e-74 | 250 |
MS.gene33341.t1 | MTR_6g023855 | 41.196 | 301 | 161 | 6 | 175 | 471 | 229 | 517 | 3.63e-71 | 239 |
MS.gene33341.t1 | MTR_7g075520 | 41.509 | 318 | 153 | 7 | 117 | 421 | 138 | 435 | 8.77e-68 | 229 |
MS.gene33341.t1 | MTR_1g088750 | 39.869 | 306 | 167 | 4 | 176 | 470 | 921 | 1220 | 2.85e-62 | 224 |
MS.gene33341.t1 | MTR_1g088750 | 40.196 | 306 | 166 | 5 | 176 | 470 | 872 | 1171 | 3.32e-62 | 224 |
MS.gene33341.t1 | MTR_5g009840 | 38.415 | 328 | 188 | 6 | 99 | 424 | 428 | 743 | 5.32e-62 | 221 |
MS.gene33341.t1 | MTR_8g099065 | 39.130 | 322 | 158 | 7 | 173 | 462 | 514 | 829 | 5.61e-62 | 221 |
MS.gene33341.t1 | MTR_6g023865 | 34.946 | 372 | 182 | 9 | 141 | 471 | 90 | 442 | 7.37e-62 | 213 |
MS.gene33341.t1 | MTR_1g088730 | 41.275 | 298 | 158 | 5 | 176 | 462 | 915 | 1206 | 2.00e-61 | 222 |
MS.gene33341.t1 | MTR_6g033740 | 43.750 | 256 | 135 | 4 | 171 | 424 | 478 | 726 | 9.78e-60 | 214 |
MS.gene33341.t1 | MTR_3g089100 | 45.614 | 228 | 116 | 2 | 191 | 416 | 901 | 1122 | 8.47e-59 | 214 |
MS.gene33341.t1 | MTR_3g089100 | 45.614 | 228 | 116 | 2 | 191 | 416 | 896 | 1117 | 8.81e-59 | 214 |
MS.gene33341.t1 | MTR_3g089100 | 45.614 | 228 | 116 | 2 | 191 | 416 | 930 | 1151 | 9.30e-59 | 214 |
MS.gene33341.t1 | MTR_1g099480 | 41.634 | 257 | 140 | 4 | 171 | 424 | 446 | 695 | 1.11e-58 | 211 |
MS.gene33341.t1 | MTR_1g101870 | 42.063 | 252 | 136 | 4 | 173 | 421 | 485 | 729 | 7.87e-56 | 203 |
MS.gene33341.t1 | MTR_1g101870 | 42.063 | 252 | 136 | 4 | 173 | 421 | 537 | 781 | 9.73e-56 | 203 |
MS.gene33341.t1 | MTR_1g063380 | 39.404 | 302 | 160 | 7 | 183 | 470 | 469 | 761 | 5.13e-55 | 201 |
MS.gene33341.t1 | MTR_1g063380 | 42.373 | 236 | 124 | 4 | 192 | 424 | 205 | 431 | 4.36e-46 | 175 |
MS.gene33341.t1 | MTR_7g101870 | 38.411 | 302 | 162 | 6 | 183 | 470 | 470 | 761 | 1.24e-54 | 199 |
MS.gene33341.t1 | MTR_7g101870 | 41.949 | 236 | 125 | 4 | 192 | 424 | 206 | 432 | 1.14e-45 | 174 |
MS.gene33341.t1 | MTR_2g095210 | 38.411 | 302 | 163 | 6 | 183 | 470 | 397 | 689 | 5.01e-54 | 197 |
MS.gene33341.t1 | MTR_2g095210 | 41.121 | 107 | 59 | 2 | 172 | 274 | 184 | 290 | 2.02e-14 | 77.0 |
MS.gene33341.t1 | MTR_1g099470 | 41.700 | 247 | 133 | 5 | 173 | 416 | 414 | 652 | 9.60e-54 | 196 |
MS.gene33341.t1 | MTR_7g089040 | 39.869 | 306 | 152 | 6 | 170 | 471 | 663 | 940 | 2.25e-51 | 191 |
MS.gene33341.t1 | MTR_7g089040 | 35.586 | 222 | 130 | 6 | 229 | 447 | 422 | 633 | 2.73e-26 | 115 |
MS.gene33341.t1 | MTR_3g092070 | 37.736 | 265 | 150 | 5 | 192 | 454 | 81 | 332 | 5.24e-49 | 176 |
MS.gene33341.t1 | MTR_3g092080 | 38.491 | 265 | 148 | 6 | 192 | 454 | 84 | 335 | 1.80e-48 | 173 |
MS.gene33341.t1 | MTR_3g092070 | 38.866 | 247 | 142 | 4 | 192 | 436 | 81 | 320 | 3.05e-48 | 172 |
MS.gene33341.t1 | MTR_3g092080 | 38.491 | 265 | 148 | 6 | 192 | 454 | 84 | 335 | 3.10e-48 | 174 |
MS.gene33341.t1 | MTR_7g088830 | 38.567 | 293 | 148 | 6 | 183 | 471 | 649 | 913 | 3.37e-47 | 179 |
MS.gene33341.t1 | MTR_7g088830 | 30.851 | 282 | 174 | 9 | 169 | 442 | 370 | 638 | 3.94e-23 | 105 |
MS.gene33341.t1 | MTR_1g099480 | 44.231 | 208 | 105 | 4 | 159 | 363 | 436 | 635 | 4.04e-47 | 176 |
MS.gene33341.t1 | MTR_6g023845 | 32.407 | 324 | 152 | 8 | 169 | 471 | 82 | 359 | 6.08e-47 | 169 |
MS.gene33341.t1 | MTR_8g099065 | 46.114 | 193 | 96 | 4 | 173 | 363 | 514 | 700 | 8.52e-47 | 176 |
MS.gene33341.t1 | MTR_3g117230 | 39.844 | 256 | 131 | 9 | 174 | 421 | 125 | 365 | 1.65e-46 | 169 |
MS.gene33341.t1 | MTR_3g112260 | 39.844 | 256 | 131 | 9 | 174 | 421 | 122 | 362 | 2.94e-46 | 169 |
MS.gene33341.t1 | MTR_4g094270 | 37.367 | 281 | 142 | 7 | 186 | 459 | 150 | 403 | 5.11e-46 | 168 |
MS.gene33341.t1 | MTR_4g074920 | 37.818 | 275 | 140 | 6 | 191 | 462 | 668 | 914 | 5.48e-46 | 175 |
MS.gene33341.t1 | MTR_2g095320 | 36.458 | 288 | 153 | 6 | 190 | 466 | 419 | 687 | 2.26e-45 | 172 |
MS.gene33341.t1 | MTR_2g095320 | 38.996 | 259 | 139 | 6 | 172 | 424 | 130 | 375 | 1.48e-41 | 161 |
MS.gene33341.t1 | MTR_1g083330 | 39.344 | 244 | 131 | 6 | 186 | 422 | 161 | 394 | 3.09e-42 | 158 |
MS.gene33341.t1 | MTR_4g033235 | 39.344 | 244 | 131 | 6 | 186 | 422 | 162 | 395 | 3.73e-42 | 158 |
MS.gene33341.t1 | MTR_1g069105 | 36.538 | 260 | 151 | 5 | 186 | 440 | 182 | 432 | 2.86e-41 | 156 |
MS.gene33341.t1 | MTR_7g099640 | 36.923 | 260 | 150 | 5 | 186 | 440 | 181 | 431 | 3.25e-41 | 155 |
MS.gene33341.t1 | MTR_7g089290 | 34.965 | 286 | 172 | 6 | 190 | 470 | 665 | 941 | 4.69e-41 | 160 |
MS.gene33341.t1 | MTR_7g089290 | 34.965 | 286 | 172 | 6 | 190 | 470 | 637 | 913 | 5.31e-41 | 160 |
MS.gene33341.t1 | MTR_7g099640 | 37.860 | 243 | 138 | 4 | 186 | 423 | 181 | 415 | 6.11e-41 | 154 |
MS.gene33341.t1 | MTR_3g115110 | 37.743 | 257 | 136 | 7 | 191 | 441 | 248 | 486 | 1.82e-39 | 154 |
MS.gene33341.t1 | MTR_2g438140 | 37.698 | 252 | 143 | 5 | 186 | 432 | 220 | 462 | 2.22e-39 | 154 |
MS.gene33341.t1 | MTR_2g438140 | 37.698 | 252 | 143 | 5 | 186 | 432 | 280 | 522 | 3.28e-39 | 153 |
MS.gene33341.t1 | MTR_2g007010 | 32.993 | 294 | 178 | 6 | 183 | 471 | 519 | 798 | 5.08e-39 | 154 |
MS.gene33341.t1 | MTR_2g007010 | 32.639 | 288 | 168 | 8 | 191 | 460 | 237 | 516 | 1.15e-34 | 140 |
MS.gene33341.t1 | MTR_7g088850 | 36.100 | 241 | 139 | 5 | 190 | 424 | 280 | 511 | 7.54e-39 | 151 |
MS.gene33341.t1 | MTR_7g088850 | 29.437 | 231 | 144 | 9 | 199 | 422 | 24 | 242 | 6.26e-14 | 75.1 |
MS.gene33341.t1 | MTR_3g062510 | 34.874 | 238 | 142 | 4 | 190 | 422 | 157 | 386 | 2.03e-38 | 147 |
MS.gene33341.t1 | MTR_7g010800 | 37.154 | 253 | 143 | 7 | 186 | 432 | 200 | 442 | 5.84e-38 | 150 |
MS.gene33341.t1 | MTR_4g094662 | 37.549 | 253 | 142 | 6 | 186 | 432 | 223 | 465 | 1.14e-37 | 149 |
MS.gene33341.t1 | MTR_1g095660 | 36.398 | 261 | 139 | 9 | 174 | 421 | 104 | 350 | 3.28e-37 | 143 |
MS.gene33341.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 125 | 365 | 6.03e-37 | 143 |
MS.gene33341.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 207 | 447 | 3.15e-36 | 142 |
MS.gene33341.t1 | MTR_7g088980 | 34.911 | 169 | 96 | 6 | 260 | 422 | 18 | 178 | 4.97e-12 | 68.9 |
MS.gene33341.t1 | MTR_2g101290 | 37.121 | 264 | 145 | 7 | 164 | 421 | 392 | 640 | 3.32e-36 | 145 |
MS.gene33341.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 275 | 515 | 4.13e-36 | 143 |
MS.gene33341.t1 | MTR_7g088980 | 36.441 | 236 | 133 | 9 | 195 | 422 | 20 | 246 | 1.81e-26 | 114 |
MS.gene33341.t1 | MTR_2g101290 | 37.121 | 264 | 145 | 7 | 164 | 421 | 392 | 640 | 6.42e-36 | 145 |
MS.gene33341.t1 | MTR_7g096060 | 38.431 | 255 | 132 | 8 | 192 | 434 | 240 | 481 | 7.81e-36 | 144 |
MS.gene33341.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 301 | 541 | 8.10e-36 | 142 |
MS.gene33341.t1 | MTR_7g088980 | 35.681 | 213 | 123 | 6 | 216 | 422 | 68 | 272 | 6.32e-24 | 106 |
MS.gene33341.t1 | MTR_3g104470 | 36.466 | 266 | 146 | 9 | 186 | 447 | 220 | 466 | 1.53e-35 | 143 |
MS.gene33341.t1 | MTR_3g104480 | 39.749 | 239 | 127 | 8 | 183 | 417 | 215 | 440 | 1.63e-35 | 143 |
MS.gene33341.t1 | MTR_3g023900 | 31.310 | 313 | 176 | 7 | 181 | 472 | 520 | 814 | 3.34e-35 | 142 |
MS.gene33341.t1 | MTR_3g023900 | 33.562 | 292 | 171 | 8 | 191 | 462 | 233 | 521 | 8.73e-32 | 132 |
MS.gene33341.t1 | MTR_7g078570 | 37.698 | 252 | 138 | 7 | 192 | 434 | 192 | 433 | 7.63e-35 | 140 |
MS.gene33341.t1 | MTR_2g078630 | 33.333 | 267 | 146 | 7 | 181 | 424 | 41 | 298 | 1.71e-34 | 140 |
MS.gene33341.t1 | MTR_2g078630 | 33.333 | 267 | 146 | 7 | 181 | 424 | 569 | 826 | 3.62e-34 | 140 |
MS.gene33341.t1 | MTR_4g067100 | 36.546 | 249 | 136 | 7 | 186 | 423 | 374 | 611 | 4.60e-34 | 139 |
MS.gene33341.t1 | MTR_4g067100 | 36.546 | 249 | 136 | 7 | 186 | 423 | 374 | 611 | 4.73e-34 | 139 |
MS.gene33341.t1 | MTR_6g016600 | 37.349 | 249 | 141 | 6 | 189 | 432 | 314 | 552 | 2.61e-33 | 135 |
MS.gene33341.t1 | MTR_4g064350 | 34.295 | 312 | 163 | 11 | 188 | 490 | 316 | 594 | 4.10e-33 | 136 |
MS.gene33341.t1 | MTR_2g095440 | 40.909 | 154 | 87 | 1 | 474 | 627 | 350 | 499 | 4.21e-33 | 134 |
MS.gene33341.t1 | MTR_2g095440 | 40.909 | 154 | 87 | 1 | 474 | 627 | 356 | 505 | 4.48e-33 | 134 |
MS.gene33341.t1 | MTR_4g057795 | 41.558 | 154 | 86 | 1 | 474 | 627 | 300 | 449 | 4.72e-33 | 133 |
MS.gene33341.t1 | MTR_2g095440 | 40.909 | 154 | 87 | 1 | 474 | 627 | 410 | 559 | 6.68e-33 | 134 |
MS.gene33341.t1 | MTR_5g069780 | 36.039 | 308 | 155 | 10 | 192 | 490 | 313 | 587 | 7.13e-33 | 135 |
MS.gene33341.t1 | MTR_1g069105 | 38.614 | 202 | 111 | 4 | 186 | 382 | 182 | 375 | 9.09e-33 | 130 |
MS.gene33341.t1 | MTR_1g028390 | 35.793 | 271 | 152 | 8 | 181 | 447 | 318 | 570 | 1.36e-32 | 134 |
MS.gene33341.t1 | MTR_4g057795 | 41.558 | 154 | 86 | 1 | 474 | 627 | 410 | 559 | 2.06e-32 | 132 |
MS.gene33341.t1 | MTR_3g062510 | 35.124 | 242 | 144 | 4 | 134 | 370 | 101 | 334 | 2.13e-32 | 129 |
MS.gene33341.t1 | MTR_0376s0020 | 36.255 | 251 | 142 | 7 | 192 | 434 | 1 | 241 | 2.16e-32 | 132 |
MS.gene33341.t1 | MTR_6g059690 | 36.508 | 252 | 141 | 7 | 192 | 434 | 197 | 438 | 2.44e-32 | 133 |
MS.gene33341.t1 | MTR_5g075340 | 35.019 | 257 | 145 | 8 | 169 | 421 | 213 | 451 | 6.54e-32 | 132 |
MS.gene33341.t1 | MTR_3g462930 | 35.065 | 308 | 158 | 10 | 192 | 490 | 304 | 578 | 4.72e-31 | 129 |
MS.gene33341.t1 | MTR_2g024440 | 34.413 | 247 | 140 | 5 | 192 | 428 | 214 | 448 | 1.56e-30 | 125 |
MS.gene33341.t1 | MTR_2g024440 | 34.413 | 247 | 140 | 5 | 192 | 428 | 297 | 531 | 2.11e-30 | 126 |
MS.gene33341.t1 | MTR_3g080970 | 42.857 | 154 | 84 | 2 | 474 | 627 | 538 | 687 | 2.44e-30 | 127 |
MS.gene33341.t1 | MTR_2g024440 | 34.413 | 247 | 140 | 5 | 192 | 428 | 296 | 530 | 2.50e-30 | 126 |
MS.gene33341.t1 | MTR_3g023890 | 31.366 | 322 | 176 | 8 | 181 | 479 | 374 | 673 | 3.44e-30 | 126 |
MS.gene33341.t1 | MTR_3g023890 | 30.952 | 294 | 166 | 11 | 194 | 462 | 94 | 375 | 3.55e-24 | 107 |
MS.gene33341.t1 | MTR_8g099605 | 30.690 | 290 | 154 | 8 | 151 | 423 | 139 | 398 | 6.96e-28 | 119 |
MS.gene33341.t1 | MTR_8g099605 | 30.690 | 290 | 154 | 8 | 151 | 423 | 380 | 639 | 8.22e-28 | 119 |
MS.gene33341.t1 | MTR_8g023550 | 32.549 | 255 | 136 | 8 | 174 | 421 | 151 | 376 | 1.04e-27 | 116 |
MS.gene33341.t1 | MTR_3g096000 | 35.409 | 257 | 146 | 7 | 187 | 432 | 291 | 538 | 2.18e-27 | 118 |
MS.gene33341.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 12 | 234 | 1.05e-26 | 114 |
MS.gene33341.t1 | MTR_7g088980 | 36.441 | 236 | 133 | 9 | 195 | 422 | 20 | 246 | 1.07e-26 | 114 |
MS.gene33341.t1 | MTR_7g088980 | 29.435 | 248 | 121 | 6 | 181 | 424 | 275 | 472 | 4.20e-22 | 100 |
MS.gene33341.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 62 | 284 | 3.08e-26 | 113 |
MS.gene33341.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 188 | 410 | 3.11e-26 | 114 |
MS.gene33341.t1 | MTR_3g104490 | 35.088 | 228 | 115 | 7 | 192 | 417 | 207 | 403 | 6.42e-26 | 113 |
MS.gene33341.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 238 | 460 | 6.43e-26 | 113 |
MS.gene33341.t1 | MTR_8g469460 | 35.965 | 228 | 105 | 7 | 192 | 417 | 207 | 395 | 1.36e-25 | 112 |
MS.gene33341.t1 | MTR_7g088980 | 35.681 | 213 | 123 | 6 | 216 | 422 | 68 | 272 | 4.37e-24 | 107 |
MS.gene33341.t1 | MTR_7g088980 | 29.435 | 248 | 121 | 6 | 181 | 424 | 301 | 498 | 6.55e-22 | 100 |
MS.gene33341.t1 | MTR_4g088885 | 32.959 | 267 | 141 | 11 | 223 | 468 | 256 | 505 | 2.93e-23 | 105 |
MS.gene33341.t1 | MTR_8g056860 | 30.000 | 220 | 146 | 5 | 206 | 421 | 484 | 699 | 2.30e-22 | 102 |
MS.gene33341.t1 | MTR_5g074850 | 27.988 | 343 | 210 | 12 | 99 | 421 | 403 | 728 | 4.61e-19 | 92.4 |
MS.gene33341.t1 | MTR_1g044600 | 32.973 | 185 | 109 | 4 | 257 | 434 | 193 | 369 | 3.60e-18 | 88.6 |
MS.gene33341.t1 | MTR_6g005760 | 27.488 | 211 | 117 | 6 | 227 | 412 | 362 | 561 | 3.89e-14 | 75.9 |
MS.gene33341.t1 | MTR_6g005760 | 27.488 | 211 | 117 | 6 | 227 | 412 | 234 | 433 | 4.39e-14 | 75.5 |
MS.gene33341.t1 | MTR_5g020530 | 27.830 | 212 | 112 | 7 | 227 | 411 | 387 | 584 | 1.66e-13 | 73.9 |
MS.gene33341.t1 | MTR_3g076930 | 30.412 | 194 | 109 | 5 | 204 | 379 | 171 | 356 | 2.52e-13 | 73.2 |
MS.gene33341.t1 | MTR_4g083460 | 27.600 | 250 | 111 | 8 | 194 | 421 | 839 | 1040 | 2.10e-12 | 70.9 |
MS.gene33341.t1 | MTR_4g077880 | 25.943 | 212 | 120 | 6 | 227 | 412 | 368 | 568 | 1.09e-11 | 68.2 |
MS.gene33341.t1 | MTR_4g112600 | 43.038 | 79 | 43 | 2 | 195 | 271 | 3 | 81 | 4.37e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33341.t1 | AT1G80350 | 79.455 | 477 | 87 | 5 | 7 | 474 | 44 | 518 | 0.0 | 768 |
MS.gene33341.t1 | AT2G34560 | 49.110 | 281 | 132 | 5 | 177 | 454 | 85 | 357 | 3.96e-89 | 282 |
MS.gene33341.t1 | AT2G34560 | 49.110 | 281 | 132 | 5 | 177 | 454 | 94 | 366 | 5.05e-89 | 282 |
MS.gene33341.t1 | AT3G54540 | 84.375 | 160 | 25 | 0 | 474 | 633 | 532 | 691 | 1.13e-84 | 280 |
MS.gene33341.t1 | AT3G54540 | 84.375 | 160 | 25 | 0 | 474 | 633 | 532 | 691 | 1.13e-84 | 280 |
MS.gene33341.t1 | AT2G27600 | 40.823 | 316 | 155 | 3 | 181 | 471 | 118 | 426 | 4.54e-78 | 255 |
MS.gene33341.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 62 | 346 | 1.50e-73 | 240 |
MS.gene33341.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 62 | 346 | 1.50e-73 | 240 |
MS.gene33341.t1 | AT3G27120 | 41.806 | 299 | 161 | 4 | 174 | 470 | 382 | 669 | 9.61e-73 | 247 |
MS.gene33341.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 195 | 479 | 7.96e-72 | 240 |
MS.gene33341.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 199 | 483 | 8.71e-72 | 240 |
MS.gene33341.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 205 | 489 | 1.64e-71 | 239 |
MS.gene33341.t1 | AT3G19740 | 40.876 | 274 | 151 | 4 | 191 | 462 | 700 | 964 | 1.86e-62 | 224 |
MS.gene33341.t1 | AT4G28000 | 44.314 | 255 | 133 | 5 | 172 | 424 | 496 | 743 | 3.65e-62 | 221 |
MS.gene33341.t1 | AT4G28000 | 41.971 | 274 | 150 | 5 | 172 | 443 | 496 | 762 | 6.40e-62 | 221 |
MS.gene33341.t1 | AT4G28000 | 41.971 | 274 | 150 | 5 | 172 | 443 | 494 | 760 | 8.02e-62 | 220 |
MS.gene33341.t1 | AT4G02480 | 45.902 | 244 | 123 | 3 | 176 | 416 | 943 | 1180 | 3.78e-61 | 221 |
MS.gene33341.t1 | AT5G52882 | 44.094 | 254 | 133 | 5 | 173 | 424 | 494 | 740 | 1.97e-60 | 216 |
MS.gene33341.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 492 | 793 | 2.12e-60 | 216 |
MS.gene33341.t1 | AT1G50140 | 45.536 | 224 | 114 | 3 | 191 | 412 | 688 | 905 | 2.43e-60 | 218 |
MS.gene33341.t1 | AT1G50140 | 45.536 | 224 | 114 | 3 | 191 | 412 | 688 | 905 | 2.43e-60 | 218 |
MS.gene33341.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 497 | 798 | 2.57e-60 | 216 |
MS.gene33341.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 497 | 798 | 2.57e-60 | 216 |
MS.gene33341.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 495 | 796 | 2.72e-60 | 216 |
MS.gene33341.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 495 | 796 | 2.72e-60 | 216 |
MS.gene33341.t1 | AT1G50140 | 45.536 | 224 | 114 | 3 | 191 | 412 | 710 | 927 | 2.77e-60 | 218 |
MS.gene33341.t1 | AT1G50140 | 45.536 | 224 | 114 | 3 | 191 | 412 | 710 | 927 | 2.77e-60 | 218 |
MS.gene33341.t1 | AT1G50140 | 45.536 | 224 | 114 | 3 | 191 | 412 | 710 | 927 | 2.77e-60 | 218 |
MS.gene33341.t1 | AT1G02890 | 41.611 | 298 | 157 | 6 | 176 | 462 | 924 | 1215 | 3.14e-60 | 218 |
MS.gene33341.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 778 | 1034 | 8.60e-57 | 208 |
MS.gene33341.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 805 | 1061 | 1.01e-56 | 207 |
MS.gene33341.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 803 | 1059 | 1.08e-56 | 207 |
MS.gene33341.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 801 | 1057 | 1.09e-56 | 207 |
MS.gene33341.t1 | AT5G03340 | 38.944 | 303 | 160 | 6 | 183 | 470 | 468 | 760 | 6.53e-55 | 201 |
MS.gene33341.t1 | AT5G03340 | 40.541 | 259 | 139 | 5 | 172 | 424 | 181 | 430 | 1.15e-45 | 174 |
MS.gene33341.t1 | AT3G09840 | 37.874 | 301 | 166 | 6 | 183 | 470 | 468 | 760 | 2.51e-52 | 193 |
MS.gene33341.t1 | AT3G09840 | 40.541 | 259 | 139 | 5 | 172 | 424 | 181 | 430 | 1.11e-45 | 174 |
MS.gene33341.t1 | AT3G53230 | 39.130 | 299 | 163 | 5 | 183 | 470 | 469 | 759 | 8.72e-52 | 191 |
MS.gene33341.t1 | AT3G53230 | 40.927 | 259 | 138 | 5 | 172 | 424 | 182 | 431 | 5.78e-46 | 174 |
MS.gene33341.t1 | AT4G27680 | 36.531 | 271 | 157 | 4 | 192 | 460 | 81 | 338 | 6.45e-50 | 179 |
MS.gene33341.t1 | AT3G56690 | 39.542 | 306 | 161 | 8 | 183 | 479 | 712 | 1002 | 4.76e-49 | 185 |
MS.gene33341.t1 | AT3G56690 | 36.607 | 224 | 125 | 6 | 226 | 446 | 416 | 625 | 8.69e-32 | 132 |
MS.gene33341.t1 | AT5G53540 | 35.793 | 271 | 159 | 5 | 192 | 460 | 84 | 341 | 5.09e-48 | 174 |
MS.gene33341.t1 | AT1G62130 | 41.949 | 236 | 113 | 6 | 191 | 424 | 742 | 955 | 4.07e-47 | 179 |
MS.gene33341.t1 | AT1G62130 | 41.949 | 236 | 113 | 6 | 191 | 424 | 749 | 962 | 5.18e-47 | 179 |
MS.gene33341.t1 | AT5G19990 | 38.868 | 265 | 141 | 7 | 186 | 438 | 94 | 349 | 2.30e-46 | 168 |
MS.gene33341.t1 | AT5G19990 | 38.868 | 265 | 141 | 7 | 186 | 438 | 152 | 407 | 6.36e-46 | 168 |
MS.gene33341.t1 | AT5G19990 | 38.868 | 265 | 141 | 7 | 186 | 438 | 152 | 407 | 6.36e-46 | 168 |
MS.gene33341.t1 | AT5G20000 | 38.868 | 265 | 141 | 7 | 186 | 438 | 152 | 407 | 9.03e-46 | 168 |
MS.gene33341.t1 | AT5G43010 | 39.062 | 256 | 133 | 9 | 174 | 421 | 122 | 362 | 1.26e-45 | 167 |
MS.gene33341.t1 | AT1G45000 | 39.062 | 256 | 133 | 9 | 174 | 421 | 122 | 362 | 1.73e-45 | 166 |
MS.gene33341.t1 | AT1G02890 | 36.577 | 298 | 144 | 7 | 176 | 462 | 924 | 1187 | 4.92e-44 | 170 |
MS.gene33341.t1 | AT1G03000 | 35.764 | 288 | 168 | 7 | 190 | 470 | 653 | 930 | 1.17e-43 | 168 |
MS.gene33341.t1 | AT3G05530 | 38.683 | 243 | 134 | 5 | 186 | 422 | 162 | 395 | 2.82e-42 | 158 |
MS.gene33341.t1 | AT1G09100 | 39.344 | 244 | 131 | 6 | 186 | 422 | 161 | 394 | 3.68e-42 | 158 |
MS.gene33341.t1 | AT2G20140 | 37.860 | 243 | 138 | 4 | 186 | 423 | 179 | 413 | 1.19e-41 | 157 |
MS.gene33341.t1 | AT4G29040 | 37.449 | 243 | 139 | 4 | 186 | 423 | 179 | 413 | 2.81e-41 | 156 |
MS.gene33341.t1 | AT1G53750 | 37.255 | 255 | 139 | 7 | 174 | 421 | 151 | 391 | 2.94e-40 | 152 |
MS.gene33341.t1 | AT1G50250 | 38.113 | 265 | 138 | 8 | 183 | 441 | 252 | 496 | 1.33e-39 | 155 |
MS.gene33341.t1 | AT5G42270 | 37.743 | 257 | 136 | 7 | 191 | 441 | 246 | 484 | 3.11e-39 | 154 |
MS.gene33341.t1 | AT5G15250 | 37.037 | 243 | 137 | 6 | 186 | 422 | 215 | 447 | 6.73e-39 | 153 |
MS.gene33341.t1 | AT2G03670 | 36.759 | 253 | 144 | 5 | 181 | 426 | 272 | 515 | 1.37e-38 | 151 |
MS.gene33341.t1 | AT2G03670 | 34.615 | 234 | 139 | 6 | 196 | 422 | 23 | 249 | 2.67e-29 | 123 |
MS.gene33341.t1 | AT5G58290 | 34.874 | 238 | 142 | 4 | 190 | 422 | 150 | 379 | 1.77e-38 | 147 |
MS.gene33341.t1 | AT2G26140 | 37.838 | 259 | 140 | 9 | 193 | 447 | 225 | 466 | 9.05e-37 | 147 |
MS.gene33341.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 222 | 454 | 1.12e-36 | 146 |
MS.gene33341.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 218 | 450 | 1.31e-36 | 146 |
MS.gene33341.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 218 | 450 | 1.31e-36 | 146 |
MS.gene33341.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 218 | 450 | 1.31e-36 | 146 |
MS.gene33341.t1 | AT1G06430 | 37.349 | 249 | 137 | 7 | 186 | 428 | 211 | 446 | 1.53e-36 | 145 |
MS.gene33341.t1 | AT1G06430 | 37.349 | 249 | 137 | 7 | 186 | 428 | 211 | 446 | 1.53e-36 | 145 |
MS.gene33341.t1 | AT1G06430 | 37.349 | 249 | 137 | 7 | 186 | 428 | 211 | 446 | 1.53e-36 | 145 |
MS.gene33341.t1 | AT3G01610 | 32.353 | 340 | 194 | 9 | 156 | 474 | 473 | 797 | 2.88e-36 | 145 |
MS.gene33341.t1 | AT3G01610 | 33.106 | 293 | 179 | 5 | 186 | 462 | 224 | 515 | 8.55e-36 | 144 |
MS.gene33341.t1 | AT1G53780 | 36.047 | 258 | 144 | 7 | 174 | 423 | 323 | 567 | 2.93e-36 | 144 |
MS.gene33341.t1 | AT1G53780 | 36.047 | 258 | 144 | 7 | 174 | 423 | 323 | 567 | 2.93e-36 | 144 |
MS.gene33341.t1 | AT1G53780 | 36.047 | 258 | 144 | 7 | 174 | 423 | 322 | 566 | 2.93e-36 | 144 |
MS.gene33341.t1 | AT1G53780 | 36.047 | 258 | 144 | 7 | 174 | 423 | 344 | 588 | 3.41e-36 | 144 |
MS.gene33341.t1 | AT3G01610 | 32.353 | 340 | 194 | 9 | 156 | 474 | 473 | 797 | 3.77e-36 | 145 |
MS.gene33341.t1 | AT3G01610 | 33.106 | 293 | 179 | 5 | 186 | 462 | 224 | 515 | 8.91e-36 | 144 |
MS.gene33341.t1 | AT5G15250 | 34.211 | 266 | 136 | 7 | 186 | 422 | 215 | 470 | 1.79e-35 | 140 |
MS.gene33341.t1 | AT3G16290 | 37.121 | 264 | 145 | 7 | 164 | 421 | 384 | 632 | 2.40e-35 | 143 |
MS.gene33341.t1 | AT3G02450 | 37.751 | 249 | 140 | 6 | 189 | 432 | 328 | 566 | 4.48e-34 | 138 |
MS.gene33341.t1 | AT1G07510 | 33.442 | 308 | 163 | 9 | 192 | 490 | 324 | 598 | 6.86e-34 | 138 |
MS.gene33341.t1 | AT1G05910 | 32.288 | 319 | 189 | 9 | 114 | 423 | 309 | 609 | 7.24e-34 | 139 |
MS.gene33341.t1 | AT3G47060 | 36.039 | 308 | 155 | 11 | 192 | 490 | 322 | 596 | 2.81e-33 | 136 |
MS.gene33341.t1 | AT5G53170 | 37.450 | 251 | 140 | 8 | 194 | 440 | 361 | 598 | 3.39e-33 | 136 |
MS.gene33341.t1 | AT3G15120 | 34.454 | 238 | 138 | 6 | 194 | 422 | 728 | 956 | 1.20e-32 | 135 |
MS.gene33341.t1 | AT3G15120 | 34.454 | 238 | 138 | 6 | 194 | 422 | 718 | 946 | 1.21e-32 | 135 |
MS.gene33341.t1 | AT2G29080 | 34.202 | 307 | 161 | 9 | 192 | 490 | 319 | 592 | 3.85e-32 | 133 |
MS.gene33341.t1 | AT5G58870 | 34.314 | 306 | 163 | 8 | 192 | 490 | 326 | 600 | 1.13e-31 | 131 |
MS.gene33341.t1 | AT5G60790 | 40.909 | 154 | 87 | 1 | 474 | 627 | 415 | 564 | 2.97e-31 | 129 |
MS.gene33341.t1 | AT4G04180 | 34.894 | 235 | 129 | 6 | 192 | 415 | 311 | 532 | 3.66e-31 | 129 |
MS.gene33341.t1 | AT4G04180 | 34.894 | 235 | 129 | 6 | 192 | 415 | 316 | 537 | 3.82e-31 | 129 |
MS.gene33341.t1 | AT2G03670 | 34.615 | 234 | 139 | 6 | 196 | 422 | 23 | 249 | 4.74e-30 | 123 |
MS.gene33341.t1 | AT2G03670 | 39.241 | 158 | 90 | 3 | 181 | 333 | 272 | 428 | 8.73e-21 | 95.9 |
MS.gene33341.t1 | AT1G64550 | 42.282 | 149 | 82 | 2 | 474 | 622 | 539 | 683 | 4.02e-29 | 123 |
MS.gene33341.t1 | AT5G08470 | 33.333 | 237 | 140 | 5 | 194 | 424 | 834 | 1058 | 5.86e-29 | 123 |
MS.gene33341.t1 | AT5G08470 | 33.333 | 237 | 140 | 5 | 194 | 424 | 843 | 1067 | 6.00e-29 | 123 |
MS.gene33341.t1 | AT1G45000 | 41.420 | 169 | 86 | 6 | 174 | 336 | 122 | 283 | 7.92e-29 | 118 |
MS.gene33341.t1 | AT5G64580 | 35.019 | 257 | 147 | 7 | 187 | 432 | 308 | 555 | 4.00e-27 | 117 |
MS.gene33341.t1 | AT4G23940 | 33.465 | 254 | 139 | 7 | 186 | 422 | 421 | 661 | 5.86e-27 | 117 |
MS.gene33341.t1 | AT4G04910 | 33.333 | 267 | 140 | 12 | 223 | 468 | 246 | 495 | 5.60e-25 | 110 |
MS.gene33341.t1 | AT1G79560 | 31.818 | 198 | 127 | 5 | 229 | 422 | 527 | 720 | 2.16e-23 | 106 |
MS.gene33341.t1 | AT1G79560 | 31.818 | 198 | 127 | 5 | 229 | 422 | 527 | 720 | 2.38e-23 | 105 |
MS.gene33341.t1 | AT1G79560 | 31.818 | 198 | 127 | 5 | 229 | 422 | 527 | 720 | 2.41e-23 | 105 |
MS.gene33341.t1 | AT5G08470 | 37.956 | 137 | 77 | 3 | 194 | 326 | 843 | 975 | 5.29e-19 | 92.0 |
MS.gene33341.t1 | AT3G04340 | 37.079 | 178 | 90 | 8 | 211 | 378 | 799 | 964 | 1.56e-15 | 81.3 |
MS.gene33341.t1 | AT2G18330 | 25.229 | 218 | 120 | 6 | 227 | 412 | 384 | 590 | 4.17e-13 | 72.8 |
MS.gene33341.t1 | AT5G16930 | 26.415 | 212 | 119 | 7 | 227 | 412 | 397 | 597 | 1.69e-12 | 70.9 |
MS.gene33341.t1 | AT4G36580 | 25.581 | 215 | 120 | 6 | 227 | 412 | 381 | 584 | 2.17e-12 | 70.5 |
MS.gene33341.t1 | AT3G03060 | 29.114 | 158 | 100 | 4 | 227 | 383 | 385 | 531 | 1.94e-11 | 67.4 |
Find 179 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCTAATCAAGATAGTAAA+TGG | 0.183201 | 4.4:+87799624 | MS.gene33341:CDS |
TTATGTAAAAGCAGCCTTTC+TGG | 0.203295 | 4.4:+87802827 | MS.gene33341:intron |
ACTTGTTTCATCAGGGCTTC+TGG | 0.207403 | 4.4:+87801266 | MS.gene33341:intron |
AACGAAGATTTAGTAGAAAT+TGG | 0.208184 | 4.4:-87799473 | None:intergenic |
ATCCATTTCGCACGAATTAA+AGG | 0.213735 | 4.4:-87799344 | None:intergenic |
TCGTTACGACTCTCAAAATT+TGG | 0.227432 | 4.4:-87801604 | None:intergenic |
TCAAGCATTTCAGCCAATTC+AGG | 0.249762 | 4.4:-87800330 | None:intergenic |
CGTGCAAAACTTAGTAAATT+CGG | 0.275058 | 4.4:+87803049 | MS.gene33341:CDS |
AGCAACTGGATGCAGATAAA+AGG | 0.283997 | 4.4:+87799408 | MS.gene33341:CDS |
AAGCCGTTGTGCTTCCCTTA+TGG | 0.308493 | 4.4:+87800433 | MS.gene33341:CDS |
CTGCTACTTTAGCTTCTAAA+TGG | 0.310247 | 4.4:+87800909 | MS.gene33341:CDS |
TGAAAGCTCGGGTGGTATTC+AGG | 0.318013 | 4.4:+87803122 | MS.gene33341:CDS |
ACCCACTTGACCACCCCTTC+CGG | 0.318156 | 4.4:-87799594 | None:intergenic |
GATGCACCACCTTTCTTTAC+CGG | 0.324656 | 4.4:-87799744 | None:intergenic |
GTCCTTATGTTTGGTCCTCC+TGG | 0.327313 | 4.4:+87800818 | MS.gene33341:CDS |
TGGAAAGGTGTCCTTATGTT+TGG | 0.341007 | 4.4:+87800809 | MS.gene33341:CDS |
AGAAGTGTCTTTCCAGTTCC+AGG | 0.347867 | 4.4:-87800836 | None:intergenic |
ACCCTTTAATTCGTGCGAAA+TGG | 0.354478 | 4.4:+87799342 | MS.gene33341:CDS |
ATGGATGCCTGAATATTTCC+AGG | 0.363539 | 4.4:+87800452 | MS.gene33341:CDS |
CCCACTTGACCACCCCTTCC+GGG | 0.366495 | 4.4:-87799593 | None:intergenic |
ATCCCCACTGTCAAACTATC+AGG | 0.369183 | 4.4:+87803094 | MS.gene33341:CDS |
AAGGTTACCTGGAAATATTC+AGG | 0.370724 | 4.4:-87800459 | None:intergenic |
GGTCTGGATGTAGCCGAAAA+AGG | 0.371302 | 4.4:-87802997 | None:intergenic |
TCCATTTCGCACGAATTAAA+GGG | 0.372533 | 4.4:-87799343 | None:intergenic |
GAATGTTAAGAAAGCTCTTT+CGG | 0.384287 | 4.4:+87799367 | MS.gene33341:CDS |
ATGTTTGGTCCTCCTGGAAC+TGG | 0.386041 | 4.4:+87800824 | MS.gene33341:CDS |
GTAAAGAAAGGTGGTGCATC+TGG | 0.387564 | 4.4:+87799747 | MS.gene33341:CDS |
TGCATATCCAAATGATTTGT+GGG | 0.387983 | 4.4:-87803187 | None:intergenic |
CTTCCGCCTCATTCCATTCA+AGG | 0.388968 | 4.4:-87802317 | None:intergenic |
TGTCGCGATGCTTCCTTGAA+TGG | 0.390266 | 4.4:+87802304 | MS.gene33341:CDS |
AACTGAAGTTGTAAAGCAAC+TGG | 0.394956 | 4.4:+87799394 | MS.gene33341:CDS |
AGATGAACCCACAAATCATT+TGG | 0.396989 | 4.4:+87803180 | MS.gene33341:CDS |
CGAAGGTCCTGACCCTGAAT+TGG | 0.398187 | 4.4:+87800317 | MS.gene33341:CDS |
GAAGTAAGAAATTGAGGATA+GGG | 0.398585 | 4.4:+87802918 | MS.gene33341:CDS |
GAACTTCTAGTTCAGGTTGA+TGG | 0.408367 | 4.4:+87801320 | MS.gene33341:CDS |
TGAAATTAAGAGTATGTCTA+AGG | 0.408663 | 4.4:+87802360 | MS.gene33341:CDS |
GAAGTCTGAACTTCTAGTTC+AGG | 0.421119 | 4.4:+87801313 | MS.gene33341:CDS |
TTAGTAGAAATTGGAGGAGA+CGG | 0.421242 | 4.4:-87799464 | None:intergenic |
TTACTAAGTCCCTCCTGGTC+TGG | 0.421538 | 4.4:-87803013 | None:intergenic |
GGGATCATCGAAGGAAGAAT+TGG | 0.426570 | 4.4:-87799531 | None:intergenic |
GAGAGCATGAATCATCTAGA+AGG | 0.428309 | 4.4:+87801288 | MS.gene33341:CDS |
CAACAGTCTTCAAATTTATC+CGG | 0.432454 | 4.4:-87801633 | None:intergenic |
CGCCGGACTGATGGCTATAG+TGG | 0.434719 | 4.4:+87802262 | MS.gene33341:CDS |
GAGATATTCCCAACACTTTG+TGG | 0.436079 | 4.4:+87802940 | MS.gene33341:CDS |
TTCGAAGAAGTAAGAAATTG+AGG | 0.438056 | 4.4:+87802912 | MS.gene33341:CDS |
TCAAAATCACACATGGCAAC+AGG | 0.440279 | 4.4:-87802400 | None:intergenic |
GAAGTAGGATACTCATCTAA+TGG | 0.443032 | 4.4:-87799506 | None:intergenic |
TCTTTACCGGAGTTGATCCT+CGG | 0.447984 | 4.4:-87799731 | None:intergenic |
CCGAAAATTAGTAATGGTCT+TGG | 0.448313 | 4.4:+87801376 | MS.gene33341:CDS |
GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 4.4:-87802964 | None:intergenic |
GAAATATTCAGGCATCCATA+AGG | 0.458081 | 4.4:-87800448 | None:intergenic |
TCATCAATGAAAATTGTACT+TGG | 0.458381 | 4.4:-87800989 | None:intergenic |
GACGGAGGACGTCTTCCAAT+CGG | 0.458534 | 4.4:-87799446 | None:intergenic |
AGAAGTAAGAAATTGAGGAT+AGG | 0.461250 | 4.4:+87802917 | MS.gene33341:CDS |
GTGCAAAACTTAGTAAATTC+GGG | 0.461602 | 4.4:+87803050 | MS.gene33341:CDS |
ATTTCAGCCAATTCAGGGTC+AGG | 0.462738 | 4.4:-87800324 | None:intergenic |
CAAGCATTTCAGCCAATTCA+GGG | 0.466679 | 4.4:-87800329 | None:intergenic |
GCAACTGGATGCAGATAAAA+GGG | 0.468454 | 4.4:+87799409 | MS.gene33341:CDS |
GTTTGACAGTGGGGATAAGA+TGG | 0.469208 | 4.4:-87803087 | None:intergenic |
TATCAGGAGGGCTGAAAGCT+CGG | 0.475198 | 4.4:+87803110 | MS.gene33341:CDS |
ATCAGGAGGGCTGAAAGCTC+GGG | 0.475634 | 4.4:+87803111 | MS.gene33341:CDS |
TCCAGGGAATTAGAAGACCT+TGG | 0.475874 | 4.4:+87800789 | MS.gene33341:intron |
TTGCATATCCAAATGATTTG+TGG | 0.476672 | 4.4:-87803188 | None:intergenic |
TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 4.4:-87802948 | None:intergenic |
TGATGCATTGGCTGATCCGC+TGG | 0.481349 | 4.4:+87803216 | MS.gene33341:CDS |
ACGGAGGACGTCTTCCAATC+GGG | 0.481723 | 4.4:-87799445 | None:intergenic |
AATTGGCTGAAATGCTTGAA+AGG | 0.482451 | 4.4:+87800334 | MS.gene33341:CDS |
TGATTCTCTTTGCAACGCTA+GGG | 0.484042 | 4.4:+87801015 | MS.gene33341:CDS |
ACTGGTCGTGGCGCAAAGGC+TGG | 0.484398 | 4.4:+87799680 | MS.gene33341:CDS |
AGGCTGGTGGTGCTACTAGC+AGG | 0.485231 | 4.4:+87799696 | MS.gene33341:CDS |
TTGATTCTCTTTGCAACGCT+AGG | 0.487060 | 4.4:+87801014 | MS.gene33341:CDS |
CTTGCTTACTAAGTCCCTCC+TGG | 0.488701 | 4.4:-87803018 | None:intergenic |
GGAATGAGGCGGAAGATAGC+AGG | 0.488883 | 4.4:+87802325 | MS.gene33341:CDS |
CTAGGCGGCCTCCACATGTC+GGG | 0.490035 | 4.4:-87799551 | None:intergenic |
GTGAGATGGGATGATGTTGC+AGG | 0.493791 | 4.4:+87800381 | MS.gene33341:CDS |
TTCCAGGAGGACCAAACATA+AGG | 0.497922 | 4.4:-87800820 | None:intergenic |
GAAGATTTAGTAGAAATTGG+AGG | 0.500738 | 4.4:-87799470 | None:intergenic |
ACCCGGAAGGGGTGGTCAAG+TGG | 0.503616 | 4.4:+87799592 | MS.gene33341:CDS |
TAGAATGGTGATGGTGAAGA+TGG | 0.504832 | 4.4:+87800273 | MS.gene33341:intron |
ATCTAATCAAGATAGTAAAT+GGG | 0.505265 | 4.4:+87799625 | MS.gene33341:CDS |
GATCCGCTGGATGAATTCAC+TGG | 0.507000 | 4.4:+87803229 | MS.gene33341:CDS |
TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 4.4:-87802949 | None:intergenic |
AATGTAATGCAGGAGAAGGC+TGG | 0.512666 | 4.4:+87801558 | MS.gene33341:intron |
AACCTCTCCTGGAGTGAGAT+GGG | 0.514638 | 4.4:+87800368 | MS.gene33341:CDS |
GATGTGTTAGAAACCTCTCC+TGG | 0.517926 | 4.4:+87800357 | MS.gene33341:CDS |
CGACTCTCAAAATTTGGAAG+AGG | 0.517986 | 4.4:-87801598 | None:intergenic |
AGAGTCGTAACGAGTTGATC+CGG | 0.518492 | 4.4:+87801614 | MS.gene33341:CDS |
AAATATTCAGGCATCCATAA+GGG | 0.520528 | 4.4:-87800447 | None:intergenic |
CTTCTACTAGTATCTCTACT+AGG | 0.529634 | 4.4:-87799569 | None:intergenic |
TACTAGTAGAAGACCCGGAA+GGG | 0.533945 | 4.4:+87799580 | MS.gene33341:CDS |
AAACCTCTCCTGGAGTGAGA+TGG | 0.536341 | 4.4:+87800367 | MS.gene33341:CDS |
TGCTACTAGCAGGACTAACT+CGG | 0.540160 | 4.4:+87799706 | MS.gene33341:CDS |
CTTTACCGGAGTTGATCCTC+GGG | 0.541461 | 4.4:-87799730 | None:intergenic |
GGTTCAACGAAGTGTTTCTC+CGG | 0.543070 | 4.4:+87802438 | MS.gene33341:CDS |
ACTAGGCGGCCTCCACATGT+CGG | 0.543358 | 4.4:-87799552 | None:intergenic |
AACTCTTCTAGCTGGTGATG+TGG | 0.543575 | 4.4:+87802871 | MS.gene33341:CDS |
GGATCAACTCCGGTAAAGAA+AGG | 0.545338 | 4.4:+87799735 | MS.gene33341:CDS |
AAAGCAGTTGCTACTGAATG+TGG | 0.546539 | 4.4:+87800863 | MS.gene33341:CDS |
TGGCAGCTACTAACTTCCCA+TGG | 0.547739 | 4.4:+87801396 | MS.gene33341:CDS |
AATGTGTACATGGTAGAGAA+AGG | 0.548437 | 4.4:-87799024 | None:intergenic |
ACATCATCCCATCTCACTCC+AGG | 0.555451 | 4.4:-87800375 | None:intergenic |
AGTGCCTCATCTATGTCCCA+TGG | 0.556771 | 4.4:-87801413 | None:intergenic |
ATTGGCTGAAATGCTTGAAA+GGG | 0.558913 | 4.4:+87800335 | MS.gene33341:CDS |
AGAATGGTGATGGTGAAGAT+GGG | 0.559086 | 4.4:+87800274 | MS.gene33341:intron |
AACAGTGCAACAAATGAAGA+TGG | 0.563634 | 4.4:+87801350 | MS.gene33341:CDS |
TCATCTAACATTAAAATGTG+AGG | 0.565274 | 4.4:-87803163 | None:intergenic |
AAGGAAGAATTGGATGAAGT+AGG | 0.565663 | 4.4:-87799521 | None:intergenic |
GGGACATAGATGAGGCACTA+AGG | 0.566845 | 4.4:+87801417 | MS.gene33341:CDS |
CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 4.4:+87802955 | MS.gene33341:CDS |
ACATAGATGAAGTGGCTCGC+CGG | 0.567612 | 4.4:+87802245 | MS.gene33341:CDS |
GGGATAAGATGGTTATGACT+AGG | 0.567912 | 4.4:-87803076 | None:intergenic |
ATTCATGAAACCACTTCTCA+TGG | 0.568402 | 4.4:-87802474 | None:intergenic |
ATATTGAACGCCATGAGAAG+TGG | 0.568930 | 4.4:+87802464 | MS.gene33341:CDS |
TGATGTCAACATAGATGAAG+TGG | 0.569864 | 4.4:+87802237 | MS.gene33341:CDS |
GCGTTTAAAGATAACCCGAT+TGG | 0.569886 | 4.4:+87799431 | MS.gene33341:CDS |
TATGCAAAGCATTGATGCAT+TGG | 0.571753 | 4.4:+87803204 | MS.gene33341:CDS |
GAAGTGGCTCGCCGGACTGA+TGG | 0.574862 | 4.4:+87802253 | MS.gene33341:CDS |
TACCACTGGTCGTGGCGCAA+AGG | 0.575227 | 4.4:+87799676 | MS.gene33341:CDS |
CTCCACTATAGCCATCAGTC+CGG | 0.578208 | 4.4:-87802264 | None:intergenic |
ACACTTATAACTCTTCTAGC+TGG | 0.579323 | 4.4:+87802863 | MS.gene33341:CDS |
TCATGGCGTTCAATATCAGC+CGG | 0.580580 | 4.4:-87802457 | None:intergenic |
CCCGGAAGGGGTGGTCAAGT+GGG | 0.581390 | 4.4:+87799593 | MS.gene33341:CDS |
AGCCTTTGCGCCACGACCAG+TGG | 0.582186 | 4.4:-87799678 | None:intergenic |
GATAAATTTGAAGACTGTTG+AGG | 0.583479 | 4.4:+87801636 | MS.gene33341:CDS |
CCTCCTGATAGTTTGACAGT+GGG | 0.583525 | 4.4:-87803097 | None:intergenic |
ACAACAAGTACCACTGGTCG+TGG | 0.583638 | 4.4:+87799668 | MS.gene33341:CDS |
GTGCCTCATCTATGTCCCAT+GGG | 0.589159 | 4.4:-87801412 | None:intergenic |
ACTTTAGCTTCTAAATGGCG+TGG | 0.593643 | 4.4:+87800914 | MS.gene33341:CDS |
CCACATGTCGGGATCATCGA+AGG | 0.598651 | 4.4:-87799540 | None:intergenic |
ATCACGTGTCTGTGAGGATG+AGG | 0.603057 | 4.4:+87803288 | MS.gene33341:CDS |
ATGCTTCCTTGAATGGAATG+AGG | 0.604253 | 4.4:+87802311 | MS.gene33341:CDS |
GGTCGTGGCGCAAAGGCTGG+TGG | 0.607296 | 4.4:+87799683 | MS.gene33341:CDS |
AGAGATACTAGTAGAAGACC+CGG | 0.607403 | 4.4:+87799575 | MS.gene33341:CDS |
ACAAAGACAACAAGTACCAC+TGG | 0.607828 | 4.4:+87799662 | MS.gene33341:CDS |
GGTGATGTGGTTCGAAGTGA+AGG | 0.608891 | 4.4:+87802884 | MS.gene33341:CDS |
ATCCCATCTCACTCCAGGAG+AGG | 0.610773 | 4.4:-87800370 | None:intergenic |
GATTCTCTTTGCAACGCTAG+GGG | 0.614887 | 4.4:+87801016 | MS.gene33341:CDS |
CCTTCGATGATCCCGACATG+TGG | 0.615865 | 4.4:+87799540 | MS.gene33341:CDS |
GGCAGCTACTAACTTCCCAT+GGG | 0.620186 | 4.4:+87801397 | MS.gene33341:CDS |
TGGTAGCCGAAAATTAGTAA+TGG | 0.621203 | 4.4:+87801370 | MS.gene33341:CDS |
AAGCAGTTGCTACTGAATGT+GGG | 0.621604 | 4.4:+87800864 | MS.gene33341:CDS |
GGAGGGACTTAGTAAGCAAG+AGG | 0.623814 | 4.4:+87803021 | MS.gene33341:CDS |
CAAGATAGTAAATGGGCTCG+AGG | 0.624871 | 4.4:+87799632 | MS.gene33341:CDS |
CCCACTGTCAAACTATCAGG+AGG | 0.625194 | 4.4:+87803097 | MS.gene33341:CDS |
TCGATGATCCCGACATGTGG+AGG | 0.626148 | 4.4:+87799543 | MS.gene33341:CDS |
ATTCTCTTTGCAACGCTAGG+GGG | 0.626497 | 4.4:+87801017 | MS.gene33341:CDS |
AACATAAGGACACCTTTCCA+AGG | 0.627199 | 4.4:-87800806 | None:intergenic |
GTCTAAGGATGAGATTTCAA+AGG | 0.631259 | 4.4:+87802375 | MS.gene33341:CDS |
CCCTCCTGATAGTTTGACAG+TGG | 0.633165 | 4.4:-87803098 | None:intergenic |
AGTAGAAGACCCGGAAGGGG+TGG | 0.634193 | 4.4:+87799584 | MS.gene33341:CDS |
ACTAGTAGAAGACCCGGAAG+GGG | 0.634263 | 4.4:+87799581 | MS.gene33341:CDS |
AGAGCATGAATCATCTAGAA+GGG | 0.636154 | 4.4:+87801289 | MS.gene33341:CDS |
TTCATCTATGTTGACATCAG+CGG | 0.638522 | 4.4:-87802233 | None:intergenic |
AGGAGGGCTGAAAGCTCGGG+TGG | 0.644501 | 4.4:+87803114 | MS.gene33341:CDS |
TGCTTCTTCAAAATCACACA+TGG | 0.645740 | 4.4:-87802407 | None:intergenic |
TGTTAAGAAAGCTCTTTCGG+AGG | 0.646855 | 4.4:+87799370 | MS.gene33341:CDS |
CCGCTGGATGAATTCACTGG+TGG | 0.648121 | 4.4:+87803232 | MS.gene33341:CDS |
GCAGGACTAACTCGGGCCCG+AGG | 0.653959 | 4.4:+87799714 | MS.gene33341:CDS |
CGGCTACATCCAGACCAGGA+GGG | 0.656777 | 4.4:+87803004 | MS.gene33341:CDS |
GTAGAAATTGGAGGAGACGG+AGG | 0.660499 | 4.4:-87799461 | None:intergenic |
CTTCCTTGAATGGAATGAGG+CGG | 0.660510 | 4.4:+87802314 | MS.gene33341:CDS |
GCGTGGAGAAAGTGAGCGAA+TGG | 0.660809 | 4.4:+87800931 | MS.gene33341:CDS |
TCAACTCCGGTAAAGAAAGG+TGG | 0.662437 | 4.4:+87799738 | MS.gene33341:CDS |
CATCCATAAGGGAAGCACAA+CGG | 0.667497 | 4.4:-87800436 | None:intergenic |
GGAATTAGAAGACCTTGGAA+AGG | 0.669356 | 4.4:+87800794 | MS.gene33341:CDS |
CTTCCCATGGGACATAGATG+AGG | 0.669966 | 4.4:+87801409 | MS.gene33341:CDS |
ATACTAGTAGAAGACCCGGA+AGG | 0.671745 | 4.4:+87799579 | MS.gene33341:CDS |
CTCCTGATAGTTTGACAGTG+GGG | 0.680441 | 4.4:-87803096 | None:intergenic |
GCTACTAGCAGGACTAACTC+GGG | 0.681260 | 4.4:+87799707 | MS.gene33341:CDS |
CCACTGTCAAACTATCAGGA+GGG | 0.685381 | 4.4:+87803098 | MS.gene33341:CDS |
GTGTCTGTGAGGATGAGGAA+CGG | 0.685783 | 4.4:+87803293 | MS.gene33341:CDS |
TCGGCTACATCCAGACCAGG+AGG | 0.687323 | 4.4:+87803003 | MS.gene33341:CDS |
TCAAATAAGAGAATATACGA+AGG | 0.694533 | 4.4:+87800300 | MS.gene33341:CDS |
TCGGGCCCGAGGATCAACTC+CGG | 0.708342 | 4.4:+87799725 | MS.gene33341:CDS |
CCACCAGTGAATTCATCCAG+CGG | 0.715399 | 4.4:-87803232 | None:intergenic |
ATTGATATCACGTGTCTGTG+AGG | 0.732247 | 4.4:+87803282 | MS.gene33341:CDS |
AGTGTCTTTCCAGTTCCAGG+AGG | 0.734815 | 4.4:-87800833 | None:intergenic |
CTACTAGTATCTCTACTAGG+CGG | 0.741802 | 4.4:-87799566 | None:intergenic |
GAGAAAGTGAGCGAATGGTG+CGG | 0.752385 | 4.4:+87800936 | MS.gene33341:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACATATATTAAATGTAAT+CGG | - | chr4.4:87799065-87799084 | None:intergenic | 10.0% |
!! | GCAATAATAATATCATAAAT+CGG | - | chr4.4:87800669-87800688 | None:intergenic | 15.0% |
!!! | ATTATTTTCTTAGCTTATAT+AGG | + | chr4.4:87801675-87801694 | MS.gene33341:intron | 15.0% |
!!! | TGTTTAAAGTTTTATTTCTT+AGG | + | chr4.4:87801791-87801810 | MS.gene33341:intron | 15.0% |
!!! | TTTGTGAATGTTTTTTTATT+AGG | + | chr4.4:87801881-87801900 | MS.gene33341:intron | 15.0% |
!! | AATCTAATCAAGATAGTAAA+TGG | + | chr4.4:87799624-87799643 | MS.gene33341:CDS | 20.0% |
!! | ATCTAATCAAGATAGTAAAT+GGG | + | chr4.4:87799625-87799644 | MS.gene33341:CDS | 20.0% |
!! | ATGATACAATCAGTTAAAAA+GGG | - | chr4.4:87802199-87802218 | None:intergenic | 20.0% |
!! | ATGATATTATTATTGCGAAT+AGG | + | chr4.4:87800673-87800692 | MS.gene33341:intron | 20.0% |
!! | ATTCCTACGTATTATTTATT+TGG | + | chr4.4:87799868-87799887 | MS.gene33341:intron | 20.0% |
!! | TGATATTCATAGTAGAAATT+TGG | - | chr4.4:87801751-87801770 | None:intergenic | 20.0% |
!!! | ATGTATAGATTTTTTTGATC+TGG | + | chr4.4:87799079-87799098 | MS.gene33341:intron | 20.0% |
!!! | CAATATTTTTGAAAAACCTT+CGG | - | chr4.4:87799162-87799181 | None:intergenic | 20.0% |
!!! | GTATTTGTACTTTTATAGAA+TGG | + | chr4.4:87800258-87800277 | MS.gene33341:intron | 20.0% |
!!! | GTTTAGAATTCTTATAATTG+TGG | + | chr4.4:87800529-87800548 | MS.gene33341:intron | 20.0% |
!!! | TTAATATTTTGTTGAGTCTA+TGG | - | chr4.4:87799936-87799955 | None:intergenic | 20.0% |
!!! | TTTTATTTATACTACCACTT+TGG | + | chr4.4:87802534-87802553 | MS.gene33341:intron | 20.0% |
!!! | TTTTTAACTGTTTCATTTCT+AGG | + | chr4.4:87800712-87800731 | MS.gene33341:intron | 20.0% |
! | AAATACCATTCAAAACCATA+AGG | - | chr4.4:87800244-87800263 | None:intergenic | 25.0% |
! | AACGAAGATTTAGTAGAAAT+TGG | - | chr4.4:87799476-87799495 | None:intergenic | 25.0% |
! | AATAAAACTAACACTACCAT+TGG | - | chr4.4:87802521-87802540 | None:intergenic | 25.0% |
! | AGATAGAAAGATAACTAAGT+TGG | - | chr4.4:87802767-87802786 | None:intergenic | 25.0% |
! | ATAAGTGCAGTTTATTGAAA+GGG | + | chr4.4:87801931-87801950 | MS.gene33341:intron | 25.0% |
! | ATTGCCAACAAAACAAAAAA+TGG | + | chr4.4:87801827-87801846 | MS.gene33341:intron | 25.0% |
! | ATTGTAAGTTCCAATTTCTA+TGG | + | chr4.4:87799792-87799811 | MS.gene33341:intron | 25.0% |
! | CAACCAAATAAATAATACGT+AGG | - | chr4.4:87799874-87799893 | None:intergenic | 25.0% |
! | CAGAAGAACTTATTCAATTA+TGG | - | chr4.4:87800026-87800045 | None:intergenic | 25.0% |
! | GATGATACAATCAGTTAAAA+AGG | - | chr4.4:87802200-87802219 | None:intergenic | 25.0% |
! | TCAAATAAGAGAATATACGA+AGG | + | chr4.4:87800300-87800319 | MS.gene33341:CDS | 25.0% |
! | TCATCAATGAAAATTGTACT+TGG | - | chr4.4:87800992-87801011 | None:intergenic | 25.0% |
! | TCATCTAACATTAAAATGTG+AGG | - | chr4.4:87803166-87803185 | None:intergenic | 25.0% |
! | TCTTAGCTTATATAGGATAT+AGG | + | chr4.4:87801682-87801701 | MS.gene33341:intron | 25.0% |
! | TTTCATGTTTAATGTAATGC+AGG | + | chr4.4:87801548-87801567 | MS.gene33341:intron | 25.0% |
!! | AATCCATCACACATAATTTT+TGG | + | chr4.4:87801063-87801082 | MS.gene33341:intron | 25.0% |
!! | CAAAAAGAGTATAGAATGAT+GGG | + | chr4.4:87800095-87800114 | MS.gene33341:intron | 25.0% |
!! | TGAAATTAAGAGTATGTCTA+AGG | + | chr4.4:87802360-87802379 | MS.gene33341:CDS | 25.0% |
!! | TTATTCAATTATGGTTCTGT+AGG | - | chr4.4:87800017-87800036 | None:intergenic | 25.0% |
!! | TTTTTCATCTATCTTTGACT+TGG | + | chr4.4:87801182-87801201 | MS.gene33341:intron | 25.0% |
!!! | AATGCCATTTTTTGTTTTGT+TGG | - | chr4.4:87801834-87801853 | None:intergenic | 25.0% |
!!! | ATTTGACTTGTTTTTTCTGA+CGG | + | chr4.4:87802599-87802618 | MS.gene33341:intron | 25.0% |
!!! | CTGTTTTTTTTTTTCTTCCA+GGG | + | chr4.4:87800773-87800792 | MS.gene33341:intron | 25.0% |
!!! | GTTTTATTTCTTAGGATTTG+AGG | + | chr4.4:87801799-87801818 | MS.gene33341:intron | 25.0% |
!!! | TCTGTTTTTTTTTTTCTTCC+AGG | + | chr4.4:87800772-87800791 | MS.gene33341:intron | 25.0% |
!!! | TTTTCATCTATCTTTGACTT+GGG | + | chr4.4:87801183-87801202 | MS.gene33341:intron | 25.0% |
AAATATTCAGGCATCCATAA+GGG | - | chr4.4:87800450-87800469 | None:intergenic | 30.0% | |
AACAGAAATAATGAGCTCAA+TGG | - | chr4.4:87800758-87800777 | None:intergenic | 30.0% | |
AACTGATTGTATCATCTTGA+GGG | + | chr4.4:87802003-87802022 | MS.gene33341:intron | 30.0% | |
AAGTTGCATGTTCATTTACA+TGG | - | chr4.4:87802801-87802820 | None:intergenic | 30.0% | |
AGAAGTAAGAAATTGAGGAT+AGG | + | chr4.4:87802917-87802936 | MS.gene33341:CDS | 30.0% | |
AGTTGGAAATTCAAATGCTA+AGG | - | chr4.4:87802750-87802769 | None:intergenic | 30.0% | |
ATGGAACAAGTCTAATAGAA+TGG | - | chr4.4:87800739-87800758 | None:intergenic | 30.0% | |
CAACAGTCTTCAAATTTATC+CGG | - | chr4.4:87801636-87801655 | None:intergenic | 30.0% | |
CATAAGTGCAGTTTATTGAA+AGG | + | chr4.4:87801930-87801949 | MS.gene33341:intron | 30.0% | |
CGTGCAAAACTTAGTAAATT+CGG | + | chr4.4:87803049-87803068 | MS.gene33341:CDS | 30.0% | |
GAAGATTTAGTAGAAATTGG+AGG | - | chr4.4:87799473-87799492 | None:intergenic | 30.0% | |
GAAGTAAGAAATTGAGGATA+GGG | + | chr4.4:87802918-87802937 | MS.gene33341:CDS | 30.0% | |
GAATGTTAAGAAAGCTCTTT+CGG | + | chr4.4:87799367-87799386 | MS.gene33341:CDS | 30.0% | |
GATAAATTTGAAGACTGTTG+AGG | + | chr4.4:87801636-87801655 | MS.gene33341:CDS | 30.0% | |
GTGCAAAACTTAGTAAATTC+GGG | + | chr4.4:87803050-87803069 | MS.gene33341:CDS | 30.0% | |
GTTCCAAAAATTATGTGTGA+TGG | - | chr4.4:87801069-87801088 | None:intergenic | 30.0% | |
TAACTGATTGTATCATCTTG+AGG | + | chr4.4:87802002-87802021 | MS.gene33341:intron | 30.0% | |
TAAGTGCAGTTTATTGAAAG+GGG | + | chr4.4:87801932-87801951 | MS.gene33341:intron | 30.0% | |
TGTGTTATAGTTAGTTCGTT+TGG | + | chr4.4:87799236-87799255 | MS.gene33341:intron | 30.0% | |
TTAATGTTTAGACCCTTGAT+TGG | + | chr4.4:87800598-87800617 | MS.gene33341:intron | 30.0% | |
TTACAAAGCAAACCTTACAA+GGG | - | chr4.4:87801721-87801740 | None:intergenic | 30.0% | |
TTCATCAAAAAGCCAATCAA+GGG | - | chr4.4:87800613-87800632 | None:intergenic | 30.0% | |
TTCGAAGAAGTAAGAAATTG+AGG | + | chr4.4:87802912-87802931 | MS.gene33341:CDS | 30.0% | |
TTGCATATCCAAATGATTTG+TGG | - | chr4.4:87803191-87803210 | None:intergenic | 30.0% | |
TTTACAAAGCAAACCTTACA+AGG | - | chr4.4:87801722-87801741 | None:intergenic | 30.0% | |
TTTGAATCTTGTGTGATTTC+AGG | + | chr4.4:87799300-87799319 | MS.gene33341:intron | 30.0% | |
! | CATTTGCTAAAATGTGTACA+TGG | - | chr4.4:87799037-87799056 | None:intergenic | 30.0% |
! | CCAAAAAGAGTATAGAATGA+TGG | + | chr4.4:87800094-87800113 | MS.gene33341:intron | 30.0% |
! | CCAAGACCATTACTAATTTT+CGG | - | chr4.4:87801379-87801398 | None:intergenic | 30.0% |
! | CCATCATTCTATACTCTTTT+TGG | - | chr4.4:87800097-87800116 | None:intergenic | 30.0% |
! | CGAATTTACTAAGTTTTGCA+CGG | - | chr4.4:87803051-87803070 | None:intergenic | 30.0% |
! | GTACTTTTATAGAATGGTGA+TGG | + | chr4.4:87800264-87800283 | MS.gene33341:intron | 30.0% |
! | TGCATATCCAAATGATTTGT+GGG | - | chr4.4:87803190-87803209 | None:intergenic | 30.0% |
!! | ATTTTTGAAAAACCTTCGGA+AGG | - | chr4.4:87799158-87799177 | None:intergenic | 30.0% |
!! | CTCTTAATTTGTACTCTATC+TGG | + | chr4.4:87801210-87801229 | MS.gene33341:intron | 30.0% |
!!! | TCATTGTTGTTTTATGGTGT+TGG | + | chr4.4:87802625-87802644 | MS.gene33341:intron | 30.0% |
!!! | TTTGACTTGTTTTTTCTGAC+GGG | + | chr4.4:87802600-87802619 | MS.gene33341:intron | 30.0% |
!!! | TTTGTCCTTATGGTTTTGAA+TGG | + | chr4.4:87800236-87800255 | MS.gene33341:intron | 30.0% |
!!! | TTTTGAAGAAGCATTGGTAA+AGG | + | chr4.4:87802417-87802436 | MS.gene33341:CDS | 30.0% |
AAACTATCCAAACAGTAGTC+AGG | - | chr4.4:87800188-87800207 | None:intergenic | 35.0% | |
AACAGTGCAACAAATGAAGA+TGG | + | chr4.4:87801350-87801369 | MS.gene33341:CDS | 35.0% | |
AACTATCCAAACAGTAGTCA+GGG | - | chr4.4:87800187-87800206 | None:intergenic | 35.0% | |
AACTGAAGTTGTAAAGCAAC+TGG | + | chr4.4:87799394-87799413 | MS.gene33341:CDS | 35.0% | |
AAGGAAGAATTGGATGAAGT+AGG | - | chr4.4:87799524-87799543 | None:intergenic | 35.0% | |
AAGGTTACCTGGAAATATTC+AGG | - | chr4.4:87800462-87800481 | None:intergenic | 35.0% | |
AAGTGCAGTTTATTGAAAGG+GGG | + | chr4.4:87801933-87801952 | MS.gene33341:intron | 35.0% | |
AATGTGTACATGGTAGAGAA+AGG | - | chr4.4:87799027-87799046 | None:intergenic | 35.0% | |
AATTGGCTGAAATGCTTGAA+AGG | + | chr4.4:87800334-87800353 | MS.gene33341:CDS | 35.0% | |
ACAACCTCTTGTGTAAAAAC+AGG | + | chr4.4:87802093-87802112 | MS.gene33341:intron | 35.0% | |
ACACTTATAACTCTTCTAGC+TGG | + | chr4.4:87802863-87802882 | MS.gene33341:CDS | 35.0% | |
ACTGATTGTATCATCTTGAG+GGG | + | chr4.4:87802004-87802023 | MS.gene33341:intron | 35.0% | |
AGAGCATGAATCATCTAGAA+GGG | + | chr4.4:87801289-87801308 | MS.gene33341:CDS | 35.0% | |
AGATGAACCCACAAATCATT+TGG | + | chr4.4:87803180-87803199 | MS.gene33341:CDS | 35.0% | |
ATCCATTTCGCACGAATTAA+AGG | - | chr4.4:87799347-87799366 | None:intergenic | 35.0% | |
ATTCATGAAACCACTTCTCA+TGG | - | chr4.4:87802477-87802496 | None:intergenic | 35.0% | |
ATTCTAAACTTCAGACAAGC+AGG | - | chr4.4:87800518-87800537 | None:intergenic | 35.0% | |
ATTGGCTGAAATGCTTGAAA+GGG | + | chr4.4:87800335-87800354 | MS.gene33341:CDS | 35.0% | |
CAACCTCTTGTGTAAAAACA+GGG | + | chr4.4:87802094-87802113 | MS.gene33341:intron | 35.0% | |
CCATAAGGACAAAACAACAA+AGG | - | chr4.4:87800229-87800248 | None:intergenic | 35.0% | |
CCGAAAATTAGTAATGGTCT+TGG | + | chr4.4:87801376-87801395 | MS.gene33341:CDS | 35.0% | |
CTTCTACTAGTATCTCTACT+AGG | - | chr4.4:87799572-87799591 | None:intergenic | 35.0% | |
GAAATATTCAGGCATCCATA+AGG | - | chr4.4:87800451-87800470 | None:intergenic | 35.0% | |
GAAGTAGGATACTCATCTAA+TGG | - | chr4.4:87799509-87799528 | None:intergenic | 35.0% | |
GAGAAGTGGTTTCATGAATT+TGG | + | chr4.4:87802478-87802497 | MS.gene33341:intron | 35.0% | |
GTCTAAGGATGAGATTTCAA+AGG | + | chr4.4:87802375-87802394 | MS.gene33341:CDS | 35.0% | |
GTGTTTCATCCATTGTTAGT+AGG | - | chr4.4:87802967-87802986 | None:intergenic | 35.0% | |
GTTCATCAAAAAGCCAATCA+AGG | - | chr4.4:87800614-87800633 | None:intergenic | 35.0% | |
GTTTAATGTAATGCAGGAGA+AGG | + | chr4.4:87801554-87801573 | MS.gene33341:intron | 35.0% | |
TCCATTTCGCACGAATTAAA+GGG | - | chr4.4:87799346-87799365 | None:intergenic | 35.0% | |
TCGTTACGACTCTCAAAATT+TGG | - | chr4.4:87801607-87801626 | None:intergenic | 35.0% | |
TCTTGTGTAAAAACAGGGTA+AGG | + | chr4.4:87802099-87802118 | MS.gene33341:intron | 35.0% | |
TGATGTCAACATAGATGAAG+TGG | + | chr4.4:87802237-87802256 | MS.gene33341:CDS | 35.0% | |
TGATTGTATCATCTTGCATC+AGG | + | chr4.4:87802207-87802226 | MS.gene33341:intron | 35.0% | |
TGCTTCTTCAAAATCACACA+TGG | - | chr4.4:87802410-87802429 | None:intergenic | 35.0% | |
TGGTAGCCGAAAATTAGTAA+TGG | + | chr4.4:87801370-87801389 | MS.gene33341:CDS | 35.0% | |
TTAGTAGAAATTGGAGGAGA+CGG | - | chr4.4:87799467-87799486 | None:intergenic | 35.0% | |
TTATGTAAAAGCAGCCTTTC+TGG | + | chr4.4:87802827-87802846 | MS.gene33341:intron | 35.0% | |
TTCATCTATGTTGACATCAG+CGG | - | chr4.4:87802236-87802255 | None:intergenic | 35.0% | |
TTTGCAGTGAGAATTGTCTA+AGG | - | chr4.4:87800481-87800500 | None:intergenic | 35.0% | |
! | TGTTTGATAATACCTTCCGA+AGG | + | chr4.4:87799143-87799162 | MS.gene33341:intron | 35.0% |
!! | AGAGTTGACTTGTTTCATCA+GGG | + | chr4.4:87801259-87801278 | MS.gene33341:intron | 35.0% |
!! | CTGCTACTTTAGCTTCTAAA+TGG | + | chr4.4:87800909-87800928 | MS.gene33341:CDS | 35.0% |
!! | GTGTGATTTTGAAGAAGCAT+TGG | + | chr4.4:87802411-87802430 | MS.gene33341:CDS | 35.0% |
!! | TAGAGTTGACTTGTTTCATC+AGG | + | chr4.4:87801258-87801277 | MS.gene33341:intron | 35.0% |
!! | TAGATTTTTCAGCACCAGAA+AGG | - | chr4.4:87802844-87802863 | None:intergenic | 35.0% |
!! | TATGCAAAGCATTGATGCAT+TGG | + | chr4.4:87803204-87803223 | MS.gene33341:CDS | 35.0% |
!!! | CCTTTGTTGTTTTGTCCTTA+TGG | + | chr4.4:87800226-87800245 | MS.gene33341:intron | 35.0% |
!!! | CGGGTTTCATTGTTGTTTTA+TGG | + | chr4.4:87802619-87802638 | MS.gene33341:intron | 35.0% |
!!! | TTACCCTGTTTTTACACAAG+AGG | - | chr4.4:87802100-87802119 | None:intergenic | 35.0% |
!!! | TTGTTGTTTTATGGTGTTGG+AGG | + | chr4.4:87802628-87802647 | MS.gene33341:intron | 35.0% |
AAAGCAGTTGCTACTGAATG+TGG | + | chr4.4:87800863-87800882 | MS.gene33341:CDS | 40.0% | |
AACATAAGGACACCTTTCCA+AGG | - | chr4.4:87800809-87800828 | None:intergenic | 40.0% | |
AAGCAGTTGCTACTGAATGT+GGG | + | chr4.4:87800864-87800883 | MS.gene33341:CDS | 40.0% | |
ACAAAGACAACAAGTACCAC+TGG | + | chr4.4:87799662-87799681 | MS.gene33341:CDS | 40.0% | |
ACCCTTTAATTCGTGCGAAA+TGG | + | chr4.4:87799342-87799361 | MS.gene33341:CDS | 40.0% | |
AGAGATACTAGTAGAAGACC+CGG | + | chr4.4:87799575-87799594 | MS.gene33341:CDS | 40.0% | |
AGCAACTGGATGCAGATAAA+AGG | + | chr4.4:87799408-87799427 | MS.gene33341:CDS | 40.0% | |
AGTGCAGTTTATTGAAAGGG+GGG | + | chr4.4:87801934-87801953 | MS.gene33341:intron | 40.0% | |
ATATTGAACGCCATGAGAAG+TGG | + | chr4.4:87802464-87802483 | MS.gene33341:CDS | 40.0% | |
ATCAGTTAAAAAGGGCAACC+CGG | - | chr4.4:87802191-87802210 | None:intergenic | 40.0% | |
ATGCTTCCTTGAATGGAATG+AGG | + | chr4.4:87802311-87802330 | MS.gene33341:CDS | 40.0% | |
ATGGATGCCTGAATATTTCC+AGG | + | chr4.4:87800452-87800471 | MS.gene33341:CDS | 40.0% | |
ATTGATATCACGTGTCTGTG+AGG | + | chr4.4:87803282-87803301 | MS.gene33341:CDS | 40.0% | |
ATTTGAGCTTGACCCTTGTA+AGG | + | chr4.4:87801706-87801725 | MS.gene33341:intron | 40.0% | |
CAAGCATTTCAGCCAATTCA+GGG | - | chr4.4:87800332-87800351 | None:intergenic | 40.0% | |
CGACTCTCAAAATTTGGAAG+AGG | - | chr4.4:87801601-87801620 | None:intergenic | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr4.4:87802125-87802144 | MS.gene33341:intron | 40.0% | |
CTACTAGTATCTCTACTAGG+CGG | - | chr4.4:87799569-87799588 | None:intergenic | 40.0% | |
CTTTGTGGACCTACTAACAA+TGG | + | chr4.4:87802955-87802974 | MS.gene33341:CDS | 40.0% | |
GAGATATTCCCAACACTTTG+TGG | + | chr4.4:87802940-87802959 | MS.gene33341:CDS | 40.0% | |
GCAACTGGATGCAGATAAAA+GGG | + | chr4.4:87799409-87799428 | MS.gene33341:CDS | 40.0% | |
GCAGAATGCTCCATAGAAAT+TGG | - | chr4.4:87799805-87799824 | None:intergenic | 40.0% | |
GCGAATAGGTTCATGCTAAT+AGG | + | chr4.4:87800687-87800706 | MS.gene33341:intron | 40.0% | |
GCGTTTAAAGATAACCCGAT+TGG | + | chr4.4:87799431-87799450 | MS.gene33341:CDS | 40.0% | |
GGAATTAGAAGACCTTGGAA+AGG | + | chr4.4:87800794-87800813 | MS.gene33341:CDS | 40.0% | |
GGGATAAGATGGTTATGACT+AGG | - | chr4.4:87803079-87803098 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | + | chr4.4:87802049-87802068 | MS.gene33341:intron | 40.0% | |
GTTTATCCCTGACTACTGTT+TGG | + | chr4.4:87800178-87800197 | MS.gene33341:intron | 40.0% | |
TCAAAATCACACATGGCAAC+AGG | - | chr4.4:87802403-87802422 | None:intergenic | 40.0% | |
TCAAGCATTTCAGCCAATTC+AGG | - | chr4.4:87800333-87800352 | None:intergenic | 40.0% | |
TCAGCATAAAGACACACCAA+TGG | + | chr4.4:87802502-87802521 | MS.gene33341:intron | 40.0% | |
TGATTCTCTTTGCAACGCTA+GGG | + | chr4.4:87801015-87801034 | MS.gene33341:CDS | 40.0% | |
TGTTAAGAAAGCTCTTTCGG+AGG | + | chr4.4:87799370-87799389 | MS.gene33341:CDS | 40.0% | |
TTAGTAGGTCCACAAAGTGT+TGG | - | chr4.4:87802952-87802971 | None:intergenic | 40.0% | |
TTGATTCTCTTTGCAACGCT+AGG | + | chr4.4:87801014-87801033 | MS.gene33341:CDS | 40.0% | |
TTGTATCATCTTGCATCAGG+TGG | + | chr4.4:87802210-87802229 | MS.gene33341:intron | 40.0% | |
! | ACTTTAGCTTCTAAATGGCG+TGG | + | chr4.4:87800914-87800933 | MS.gene33341:CDS | 40.0% |
! | ATTTCTATGGAGCATTCTGC+TGG | + | chr4.4:87799805-87799824 | MS.gene33341:intron | 40.0% |
! | GAGAATTGTCTAAGGTTACC+TGG | - | chr4.4:87800473-87800492 | None:intergenic | 40.0% |
! | GAGAGCATGAATCATCTAGA+AGG | + | chr4.4:87801288-87801307 | MS.gene33341:CDS | 40.0% |
! | GAGGCACTAAGGTTTGTATT+TGG | + | chr4.4:87801428-87801447 | MS.gene33341:intron | 40.0% |
! | TAGTAGGTCCACAAAGTGTT+GGG | - | chr4.4:87802951-87802970 | None:intergenic | 40.0% |
! | TGTTGAGTCTATGGTTCTGT+AGG | - | chr4.4:87799927-87799946 | None:intergenic | 40.0% |
! | TTACACAAGAGGTTGTTTCC+AGG | - | chr4.4:87802089-87802108 | None:intergenic | 40.0% |
!! | ACTTTGGTTCTCTGTTGTGT+GGG | + | chr4.4:87802550-87802569 | MS.gene33341:intron | 40.0% |
!! | AGAATGATGGGCTTTATGAG+AGG | + | chr4.4:87800107-87800126 | MS.gene33341:intron | 40.0% |
!! | AGAATGGTGATGGTGAAGAT+GGG | + | chr4.4:87800274-87800293 | MS.gene33341:intron | 40.0% |
!! | ATGGGCTTTATGAGAGGTTT+TGG | + | chr4.4:87800113-87800132 | MS.gene33341:intron | 40.0% |
!! | GAACTTCTAGTTCAGGTTGA+TGG | + | chr4.4:87801320-87801339 | MS.gene33341:CDS | 40.0% |
!! | GAAGTCTGAACTTCTAGTTC+AGG | + | chr4.4:87801313-87801332 | MS.gene33341:CDS | 40.0% |
!! | TAGAATGGTGATGGTGAAGA+TGG | + | chr4.4:87800273-87800292 | MS.gene33341:intron | 40.0% |
!! | TGGAAAGGTGTCCTTATGTT+TGG | + | chr4.4:87800809-87800828 | MS.gene33341:CDS | 40.0% |
AAGACTGTTGAGGCAAGTAG+TGG | + | chr4.4:87801646-87801665 | MS.gene33341:intron | 45.0% | |
AATGTAATGCAGGAGAAGGC+TGG | + | chr4.4:87801558-87801577 | MS.gene33341:intron | 45.0% | |
ACTTGTTTCATCAGGGCTTC+TGG | + | chr4.4:87801266-87801285 | MS.gene33341:intron | 45.0% | |
ATACTAGTAGAAGACCCGGA+AGG | + | chr4.4:87799579-87799598 | MS.gene33341:CDS | 45.0% | |
ATCATCTTGAGGGGTAACCT+TGG | + | chr4.4:87802013-87802032 | MS.gene33341:intron | 45.0% | |
ATCCCCACTGTCAAACTATC+AGG | + | chr4.4:87803094-87803113 | MS.gene33341:CDS | 45.0% | |
ATTCTCTTTGCAACGCTAGG+GGG | + | chr4.4:87801017-87801036 | MS.gene33341:CDS | 45.0% | |
ATTTCAGCCAATTCAGGGTC+AGG | - | chr4.4:87800327-87800346 | None:intergenic | 45.0% | |
CACACAACAGAGAACCAAAG+TGG | - | chr4.4:87802551-87802570 | None:intergenic | 45.0% | |
CCACTGTCAAACTATCAGGA+GGG | + | chr4.4:87803098-87803117 | MS.gene33341:CDS | 45.0% | |
CCTCCTGATAGTTTGACAGT+GGG | - | chr4.4:87803100-87803119 | None:intergenic | 45.0% | |
CTCCTGATAGTTTGACAGTG+GGG | - | chr4.4:87803099-87803118 | None:intergenic | 45.0% | |
CTTCCTTGAATGGAATGAGG+CGG | + | chr4.4:87802314-87802333 | MS.gene33341:CDS | 45.0% | |
GAGGAACGGAGTCAAATATG+AGG | + | chr4.4:87803307-87803326 | MS.gene33341:CDS | 45.0% | |
GATGCACCACCTTTCTTTAC+CGG | - | chr4.4:87799747-87799766 | None:intergenic | 45.0% | |
GATGTGTTAGAAACCTCTCC+TGG | + | chr4.4:87800357-87800376 | MS.gene33341:CDS | 45.0% | |
GATTCTCTTTGCAACGCTAG+GGG | + | chr4.4:87801016-87801035 | MS.gene33341:CDS | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr4.4:87802124-87802143 | MS.gene33341:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr4.4:87802121-87802140 | MS.gene33341:intron | 45.0% | |
GGATCAACTCCGGTAAAGAA+AGG | + | chr4.4:87799735-87799754 | MS.gene33341:CDS | 45.0% | |
GGATGTAGCCGAAAAAGGTA+CGG | - | chr4.4:87802995-87803014 | None:intergenic | 45.0% | |
GGGATCATCGAAGGAAGAAT+TGG | - | chr4.4:87799534-87799553 | None:intergenic | 45.0% | |
GTAAAGAAAGGTGGTGCATC+TGG | + | chr4.4:87799747-87799766 | MS.gene33341:CDS | 45.0% | |
GTTTGACAGTGGGGATAAGA+TGG | - | chr4.4:87803090-87803109 | None:intergenic | 45.0% | |
TACTAGTAGAAGACCCGGAA+GGG | + | chr4.4:87799580-87799599 | MS.gene33341:CDS | 45.0% | |
TCAACTCCGGTAAAGAAAGG+TGG | + | chr4.4:87799738-87799757 | MS.gene33341:CDS | 45.0% | |
TCATGGCGTTCAATATCAGC+CGG | - | chr4.4:87802460-87802479 | None:intergenic | 45.0% | |
TCATGTGACTGTAAGGTCAC+AGG | + | chr4.4:87802056-87802075 | MS.gene33341:intron | 45.0% | |
TCCAAGGTCTTCTAATTCCC+TGG | - | chr4.4:87800793-87800812 | None:intergenic | 45.0% | |
TCCAGGGAATTAGAAGACCT+TGG | + | chr4.4:87800789-87800808 | MS.gene33341:intron | 45.0% | |
TGCTACTAGCAGGACTAACT+CGG | + | chr4.4:87799706-87799725 | MS.gene33341:CDS | 45.0% | |
TTCCAGGAGGACCAAACATA+AGG | - | chr4.4:87800823-87800842 | None:intergenic | 45.0% | |
! | AACTCTTCTAGCTGGTGATG+TGG | + | chr4.4:87802871-87802890 | MS.gene33341:CDS | 45.0% |
! | CAAGATAGTAAATGGGCTCG+AGG | + | chr4.4:87799632-87799651 | MS.gene33341:CDS | 45.0% |
! | CACCTGTTCCGTACCTTTTT+CGG | + | chr4.4:87802984-87803003 | MS.gene33341:CDS | 45.0% |
! | CATCCATAAGGGAAGCACAA+CGG | - | chr4.4:87800439-87800458 | None:intergenic | 45.0% |
! | GGTTCAACGAAGTGTTTCTC+CGG | + | chr4.4:87802438-87802457 | MS.gene33341:CDS | 45.0% |
! | TCTTTACCGGAGTTGATCCT+CGG | - | chr4.4:87799734-87799753 | None:intergenic | 45.0% |
!! | AACCACGCGAAAAGCACTTA+GGG | + | chr4.4:87799182-87799201 | MS.gene33341:intron | 45.0% |
!! | AGAAGTGTCTTTCCAGTTCC+AGG | - | chr4.4:87800839-87800858 | None:intergenic | 45.0% |
!! | AGAGTCGTAACGAGTTGATC+CGG | + | chr4.4:87801614-87801633 | MS.gene33341:CDS | 45.0% |
!! | CACTTTGGTTCTCTGTTGTG+TGG | + | chr4.4:87802549-87802568 | MS.gene33341:intron | 45.0% |
AAACCTCTCCTGGAGTGAGA+TGG | + | chr4.4:87800367-87800386 | MS.gene33341:CDS | 50.0% | |
AACCTCTCCTGGAGTGAGAT+GGG | + | chr4.4:87800368-87800387 | MS.gene33341:CDS | 50.0% | |
AAGCCGTTGTGCTTCCCTTA+TGG | + | chr4.4:87800433-87800452 | MS.gene33341:CDS | 50.0% | |
AAGGTCACAGGTTCAAGTCC+TGG | + | chr4.4:87802068-87802087 | MS.gene33341:intron | 50.0% | |
ACAACAAGTACCACTGGTCG+TGG | + | chr4.4:87799668-87799687 | MS.gene33341:CDS | 50.0% | |
ACATAGATGAAGTGGCTCGC+CGG | + | chr4.4:87802245-87802264 | MS.gene33341:CDS | 50.0% | |
ACATCATCCCATCTCACTCC+AGG | - | chr4.4:87800378-87800397 | None:intergenic | 50.0% | |
ACTAGTAGAAGACCCGGAAG+GGG | + | chr4.4:87799581-87799600 | MS.gene33341:CDS | 50.0% | |
AGTGCCTCATCTATGTCCCA+TGG | - | chr4.4:87801416-87801435 | None:intergenic | 50.0% | |
AGTGTCTTTCCAGTTCCAGG+AGG | - | chr4.4:87800836-87800855 | None:intergenic | 50.0% | |
ATCACGTGTCTGTGAGGATG+AGG | + | chr4.4:87803288-87803307 | MS.gene33341:CDS | 50.0% | |
ATGTTTGGTCCTCCTGGAAC+TGG | + | chr4.4:87800824-87800843 | MS.gene33341:CDS | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | - | chr4.4:87802033-87802052 | None:intergenic | 50.0% | |
CCACCAGTGAATTCATCCAG+CGG | - | chr4.4:87803235-87803254 | None:intergenic | 50.0% | |
CCCACTGTCAAACTATCAGG+AGG | + | chr4.4:87803097-87803116 | MS.gene33341:CDS | 50.0% | |
CCCTCCTGATAGTTTGACAG+TGG | - | chr4.4:87803101-87803120 | None:intergenic | 50.0% | |
CTCCACTATAGCCATCAGTC+CGG | - | chr4.4:87802267-87802286 | None:intergenic | 50.0% | |
CTTCCCATGGGACATAGATG+AGG | + | chr4.4:87801409-87801428 | MS.gene33341:CDS | 50.0% | |
CTTCCGCCTCATTCCATTCA+AGG | - | chr4.4:87802320-87802339 | None:intergenic | 50.0% | |
GAGAAAGTGAGCGAATGGTG+CGG | + | chr4.4:87800936-87800955 | MS.gene33341:CDS | 50.0% | |
GATCCGCTGGATGAATTCAC+TGG | + | chr4.4:87803229-87803248 | MS.gene33341:CDS | 50.0% | |
GCTACTAGCAGGACTAACTC+GGG | + | chr4.4:87799707-87799726 | MS.gene33341:CDS | 50.0% | |
GCTGCAGTGTGTCAGAAACT+TGG | - | chr4.4:87800144-87800163 | None:intergenic | 50.0% | |
GGAGGGACTTAGTAAGCAAG+AGG | + | chr4.4:87803021-87803040 | MS.gene33341:CDS | 50.0% | |
GGCAGCTACTAACTTCCCAT+GGG | + | chr4.4:87801397-87801416 | MS.gene33341:CDS | 50.0% | |
GGTCTGGATGTAGCCGAAAA+AGG | - | chr4.4:87803000-87803019 | None:intergenic | 50.0% | |
GGTGATGTGGTTCGAAGTGA+AGG | + | chr4.4:87802884-87802903 | MS.gene33341:CDS | 50.0% | |
GTAGAAATTGGAGGAGACGG+AGG | - | chr4.4:87799464-87799483 | None:intergenic | 50.0% | |
GTCCTTATGTTTGGTCCTCC+TGG | + | chr4.4:87800818-87800837 | MS.gene33341:CDS | 50.0% | |
GTGAGATGGGATGATGTTGC+AGG | + | chr4.4:87800381-87800400 | MS.gene33341:CDS | 50.0% | |
GTGCCTCATCTATGTCCCAT+GGG | - | chr4.4:87801415-87801434 | None:intergenic | 50.0% | |
GTGTCTGTGAGGATGAGGAA+CGG | + | chr4.4:87803293-87803312 | MS.gene33341:CDS | 50.0% | |
TATCAGGAGGGCTGAAAGCT+CGG | + | chr4.4:87803110-87803129 | MS.gene33341:CDS | 50.0% | |
TGAAAGCTCGGGTGGTATTC+AGG | + | chr4.4:87803122-87803141 | MS.gene33341:CDS | 50.0% | |
TGGCAGCTACTAACTTCCCA+TGG | + | chr4.4:87801396-87801415 | MS.gene33341:CDS | 50.0% | |
TGTCGCGATGCTTCCTTGAA+TGG | + | chr4.4:87802304-87802323 | MS.gene33341:CDS | 50.0% | |
! | AGCCGAAAAAGGTACGGAAC+AGG | - | chr4.4:87802989-87803008 | None:intergenic | 50.0% |
! | CTTTACCGGAGTTGATCCTC+GGG | - | chr4.4:87799733-87799752 | None:intergenic | 50.0% |
! | GGGACATAGATGAGGCACTA+AGG | + | chr4.4:87801417-87801436 | MS.gene33341:CDS | 50.0% |
!! | GAACCACGCGAAAAGCACTT+AGG | + | chr4.4:87799181-87799200 | MS.gene33341:intron | 50.0% |
ACGGAGGACGTCTTCCAATC+GGG | - | chr4.4:87799448-87799467 | None:intergenic | 55.0% | |
ATCAGGAGGGCTGAAAGCTC+GGG | + | chr4.4:87803111-87803130 | MS.gene33341:CDS | 55.0% | |
ATCCCATCTCACTCCAGGAG+AGG | - | chr4.4:87800373-87800392 | None:intergenic | 55.0% | |
CCACATGTCGGGATCATCGA+AGG | - | chr4.4:87799543-87799562 | None:intergenic | 55.0% | |
CCGCTGGATGAATTCACTGG+TGG | + | chr4.4:87803232-87803251 | MS.gene33341:CDS | 55.0% | |
CCTTCGATGATCCCGACATG+TGG | + | chr4.4:87799540-87799559 | MS.gene33341:CDS | 55.0% | |
CGAAGGTCCTGACCCTGAAT+TGG | + | chr4.4:87800317-87800336 | MS.gene33341:CDS | 55.0% | |
GACGGAGGACGTCTTCCAAT+CGG | - | chr4.4:87799449-87799468 | None:intergenic | 55.0% | |
GCGTGGAGAAAGTGAGCGAA+TGG | + | chr4.4:87800931-87800950 | MS.gene33341:CDS | 55.0% | |
GGAATGAGGCGGAAGATAGC+AGG | + | chr4.4:87802325-87802344 | MS.gene33341:CDS | 55.0% | |
TCGATGATCCCGACATGTGG+AGG | + | chr4.4:87799543-87799562 | MS.gene33341:CDS | 55.0% | |
! | CTCCCTAAGTGCTTTTCGCG+TGG | - | chr4.4:87799187-87799206 | None:intergenic | 55.0% |
!! | TGATGCATTGGCTGATCCGC+TGG | + | chr4.4:87803216-87803235 | MS.gene33341:CDS | 55.0% |
ACCCACTTGACCACCCCTTC+CGG | - | chr4.4:87799597-87799616 | None:intergenic | 60.0% | |
ACTAGGCGGCCTCCACATGT+CGG | - | chr4.4:87799555-87799574 | None:intergenic | 60.0% | |
ACTGAAGCTCCCGCATACGC+AGG | - | chr4.4:87802165-87802184 | None:intergenic | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | + | chr4.4:87802022-87802041 | MS.gene33341:intron | 60.0% | |
AGTAGAAGACCCGGAAGGGG+TGG | + | chr4.4:87799584-87799603 | MS.gene33341:CDS | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | + | chr4.4:87802169-87802188 | MS.gene33341:intron | 60.0% | |
CGCCGGACTGATGGCTATAG+TGG | + | chr4.4:87802262-87802281 | MS.gene33341:CDS | 60.0% | |
CTGAAGCTCCCGCATACGCA+GGG | - | chr4.4:87802164-87802183 | None:intergenic | 60.0% | |
TACCACTGGTCGTGGCGCAA+AGG | + | chr4.4:87799676-87799695 | MS.gene33341:CDS | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4.4:87802137-87802156 | MS.gene33341:intron | 60.0% |
!! | AGGCTGGTGGTGCTACTAGC+AGG | + | chr4.4:87799696-87799715 | MS.gene33341:CDS | 60.0% |
ACCCGGAAGGGGTGGTCAAG+TGG | + | chr4.4:87799592-87799611 | MS.gene33341:CDS | 65.0% | |
ACTGGTCGTGGCGCAAAGGC+TGG | + | chr4.4:87799680-87799699 | MS.gene33341:CDS | 65.0% | |
AGCCTTTGCGCCACGACCAG+TGG | - | chr4.4:87799681-87799700 | None:intergenic | 65.0% | |
AGGAGGGCTGAAAGCTCGGG+TGG | + | chr4.4:87803114-87803133 | MS.gene33341:CDS | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | - | chr4.4:87802152-87802171 | None:intergenic | 65.0% | |
CCCACTTGACCACCCCTTCC+GGG | - | chr4.4:87799596-87799615 | None:intergenic | 65.0% | |
CCCGGAAGGGGTGGTCAAGT+GGG | + | chr4.4:87799593-87799612 | MS.gene33341:CDS | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr4.4:87802139-87802158 | None:intergenic | 65.0% | |
CTAGGCGGCCTCCACATGTC+GGG | - | chr4.4:87799554-87799573 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | + | chr4.4:87802152-87802171 | MS.gene33341:intron | 65.0% | |
GAAGTGGCTCGCCGGACTGA+TGG | + | chr4.4:87802253-87802272 | MS.gene33341:CDS | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | - | chr4.4:87802153-87802172 | None:intergenic | 65.0% | |
TCGGGCCCGAGGATCAACTC+CGG | + | chr4.4:87799725-87799744 | MS.gene33341:CDS | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | + | chr4.4:87802170-87802189 | MS.gene33341:intron | 65.0% | |
TTCCCGGACCCTGCGTATGC+GGG | + | chr4.4:87802153-87802172 | MS.gene33341:intron | 65.0% | |
CGCATACGCAGGGTCCGGGA+AGG | - | chr4.4:87802154-87802173 | None:intergenic | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | - | chr4.4:87802158-87802177 | None:intergenic | 70.0% | |
GCAGGACTAACTCGGGCCCG+AGG | + | chr4.4:87799714-87799733 | MS.gene33341:CDS | 70.0% | |
GCTCCCGCATACGCAGGGTC+CGG | - | chr4.4:87802159-87802178 | None:intergenic | 70.0% | |
GGTCGTGGCGCAAAGGCTGG+TGG | + | chr4.4:87799683-87799702 | MS.gene33341:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 87799021 | 87803327 | 87799021 | ID=MS.gene33341 |
chr4.4 | mRNA | 87799021 | 87803327 | 87799021 | ID=MS.gene33341.t1;Parent=MS.gene33341 |
chr4.4 | exon | 87799021 | 87799037 | 87799021 | ID=MS.gene33341.t1.exon1;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87799021 | 87799037 | 87799021 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87799322 | 87799772 | 87799322 | ID=MS.gene33341.t1.exon2;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87799322 | 87799772 | 87799322 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87800276 | 87800473 | 87800276 | ID=MS.gene33341.t1.exon3;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87800276 | 87800473 | 87800276 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87800794 | 87801038 | 87800794 | ID=MS.gene33341.t1.exon4;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87800794 | 87801038 | 87800794 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87801280 | 87801438 | 87801280 | ID=MS.gene33341.t1.exon5;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87801280 | 87801438 | 87801280 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87801570 | 87801657 | 87801570 | ID=MS.gene33341.t1.exon6;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87801570 | 87801657 | 87801570 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87802229 | 87802485 | 87802229 | ID=MS.gene33341.t1.exon7;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87802229 | 87802485 | 87802229 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
chr4.4 | exon | 87802841 | 87803327 | 87802841 | ID=MS.gene33341.t1.exon8;Parent=MS.gene33341.t1 |
chr4.4 | CDS | 87802841 | 87803327 | 87802841 | ID=cds.MS.gene33341.t1;Parent=MS.gene33341.t1 |
Gene Sequence |
Protein sequence |