AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33343

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33343.t1 MTR_4g011810 98.866 529 2 1 1 525 1 529 0.0 1065
MS.gene33343.t1 MTR_4g096870 46.129 310 153 6 197 500 74 375 7.04e-90 281
MS.gene33343.t1 MTR_2g086160 42.598 331 155 5 221 523 112 435 1.72e-85 271
MS.gene33343.t1 MTR_4g053350 42.236 322 154 4 227 523 116 430 5.60e-85 270
MS.gene33343.t1 MTR_4g053350 42.236 322 154 4 227 523 116 430 1.09e-84 269
MS.gene33343.t1 MTR_6g023875 38.889 378 197 9 167 524 296 659 7.93e-81 265
MS.gene33343.t1 MTR_2g086160 50.413 242 108 4 221 458 112 345 6.23e-80 254
MS.gene33343.t1 MTR_6g023855 37.405 393 216 9 150 524 144 524 2.19e-76 250
MS.gene33343.t1 MTR_7g075520 38.542 384 209 8 150 524 120 485 1.32e-74 244
MS.gene33343.t1 MTR_6g023865 34.048 373 206 7 179 522 86 447 2.11e-66 222
MS.gene33343.t1 MTR_8g099065 38.056 360 183 8 181 508 478 829 2.08e-64 225
MS.gene33343.t1 MTR_1g088750 39.048 315 173 5 222 523 921 1229 4.44e-64 226
MS.gene33343.t1 MTR_1g088750 39.048 315 173 5 222 523 872 1180 5.72e-64 226
MS.gene33343.t1 MTR_1g088730 41.275 298 158 5 222 508 915 1206 8.54e-63 223
MS.gene33343.t1 MTR_5g009840 42.969 256 138 3 217 470 494 743 4.05e-62 218
MS.gene33343.t1 MTR_6g033740 43.750 256 135 4 217 470 478 726 9.77e-61 214
MS.gene33343.t1 MTR_3g089100 45.614 228 116 2 237 462 896 1117 4.14e-60 215
MS.gene33343.t1 MTR_3g089100 45.614 228 116 2 237 462 901 1122 4.17e-60 215
MS.gene33343.t1 MTR_3g089100 45.614 228 116 2 237 462 930 1151 4.52e-60 215
MS.gene33343.t1 MTR_1g099480 41.634 257 140 4 217 470 446 695 7.72e-60 211
MS.gene33343.t1 MTR_1g101870 42.063 252 136 4 219 467 537 781 6.45e-57 204
MS.gene33343.t1 MTR_1g101870 42.063 252 136 4 219 467 485 729 7.39e-57 203
MS.gene33343.t1 MTR_1g063380 39.145 304 162 7 229 518 469 763 7.17e-56 201
MS.gene33343.t1 MTR_1g063380 42.373 236 124 4 238 470 205 431 3.98e-47 176
MS.gene33343.t1 MTR_7g101870 38.158 304 164 6 229 518 470 763 1.71e-55 199
MS.gene33343.t1 MTR_7g101870 41.949 236 125 4 238 470 206 432 1.22e-46 174
MS.gene33343.t1 MTR_2g095210 38.158 304 165 6 229 518 397 691 6.36e-55 197
MS.gene33343.t1 MTR_2g095210 41.121 107 59 2 218 320 184 290 1.42e-14 77.0
MS.gene33343.t1 MTR_1g099470 41.700 247 133 5 219 462 414 652 2.23e-54 196
MS.gene33343.t1 MTR_7g089040 38.218 348 178 8 185 525 631 948 1.66e-53 195
MS.gene33343.t1 MTR_7g089040 35.586 222 130 6 275 493 422 633 2.50e-26 114
MS.gene33343.t1 MTR_6g023845 32.931 331 155 8 215 524 82 366 5.95e-51 178
MS.gene33343.t1 MTR_3g092070 37.736 265 150 5 238 500 81 332 5.88e-50 176
MS.gene33343.t1 MTR_3g092080 38.491 265 148 6 238 500 84 335 2.40e-49 174
MS.gene33343.t1 MTR_3g092080 38.491 265 148 6 238 500 84 335 3.99e-49 174
MS.gene33343.t1 MTR_8g099065 43.290 231 121 5 181 409 478 700 4.17e-49 180
MS.gene33343.t1 MTR_3g092070 38.866 247 142 4 238 482 81 320 7.43e-49 172
MS.gene33343.t1 MTR_7g088830 38.206 301 154 6 229 525 649 921 2.85e-48 180
MS.gene33343.t1 MTR_7g088830 30.851 282 174 9 215 488 370 638 7.45e-24 106
MS.gene33343.t1 MTR_1g099480 44.898 196 99 3 217 409 446 635 5.92e-48 176
MS.gene33343.t1 MTR_4g094270 36.054 294 154 7 232 518 150 416 1.88e-47 170
MS.gene33343.t1 MTR_3g117230 39.844 256 131 9 220 467 125 365 4.18e-47 169
MS.gene33343.t1 MTR_3g112260 39.844 256 131 9 220 467 122 362 4.57e-47 169
MS.gene33343.t1 MTR_4g074920 36.644 292 152 7 237 523 668 931 2.80e-46 174
MS.gene33343.t1 MTR_2g095320 36.770 291 148 7 236 512 419 687 1.19e-45 171
MS.gene33343.t1 MTR_2g095320 38.996 259 139 6 218 470 130 375 2.32e-42 161
MS.gene33343.t1 MTR_1g083330 38.683 243 134 5 232 468 161 394 6.39e-43 158
MS.gene33343.t1 MTR_4g033235 38.683 243 134 5 232 468 162 395 7.36e-43 158
MS.gene33343.t1 MTR_1g069105 36.538 260 151 5 232 486 182 432 3.57e-42 157
MS.gene33343.t1 MTR_7g099640 36.923 260 150 5 232 486 181 431 4.11e-42 156
MS.gene33343.t1 MTR_7g089290 34.589 292 177 6 236 522 637 919 5.72e-42 161
MS.gene33343.t1 MTR_7g089290 34.589 292 177 6 236 522 665 947 7.32e-42 160
MS.gene33343.t1 MTR_7g099640 37.860 243 138 4 232 469 181 415 8.75e-42 155
MS.gene33343.t1 MTR_2g007010 32.450 302 185 6 229 525 519 806 7.73e-40 154
MS.gene33343.t1 MTR_2g007010 32.639 288 168 8 237 506 237 516 1.34e-35 142
MS.gene33343.t1 MTR_3g115110 37.736 265 139 8 229 487 242 486 1.89e-39 152
MS.gene33343.t1 MTR_2g438140 37.302 252 144 5 232 478 220 462 3.22e-39 152
MS.gene33343.t1 MTR_3g062510 34.874 238 142 4 236 468 157 386 3.45e-39 147
MS.gene33343.t1 MTR_7g088850 36.100 241 139 5 236 470 280 511 5.43e-39 150
MS.gene33343.t1 MTR_7g088850 29.437 231 144 9 245 468 24 242 2.10e-14 76.3
MS.gene33343.t1 MTR_2g438140 37.698 252 143 5 232 478 280 522 5.65e-39 151
MS.gene33343.t1 MTR_7g010800 37.154 253 143 7 232 478 200 442 4.06e-38 149
MS.gene33343.t1 MTR_4g094662 37.154 253 143 6 232 478 223 465 1.04e-37 147
MS.gene33343.t1 MTR_1g095660 36.398 261 139 9 220 467 104 350 1.38e-37 142
MS.gene33343.t1 MTR_7g088980 35.200 250 147 5 227 470 125 365 2.69e-37 142
MS.gene33343.t1 MTR_3g104470 34.551 301 165 10 233 525 215 491 1.06e-36 144
MS.gene33343.t1 MTR_3g104480 35.974 303 160 11 229 525 215 489 1.13e-36 144
MS.gene33343.t1 MTR_7g088980 35.200 250 147 5 227 470 275 515 1.76e-36 142
MS.gene33343.t1 MTR_7g088980 36.017 236 134 9 241 468 20 246 6.47e-27 114
MS.gene33343.t1 MTR_7g088980 36.100 241 139 5 236 470 216 447 1.87e-36 141
MS.gene33343.t1 MTR_7g088980 34.118 170 98 6 305 468 17 178 2.86e-12 69.3
MS.gene33343.t1 MTR_7g088980 35.200 250 147 5 227 470 301 541 3.67e-36 142
MS.gene33343.t1 MTR_7g088980 35.211 213 124 6 262 468 68 272 1.93e-24 107
MS.gene33343.t1 MTR_2g101290 37.121 264 145 7 210 467 392 640 6.11e-36 142
MS.gene33343.t1 MTR_3g023900 31.847 314 171 8 227 519 520 811 1.17e-35 142
MS.gene33343.t1 MTR_3g023900 33.562 292 171 8 237 508 233 521 1.29e-32 133
MS.gene33343.t1 MTR_7g096060 38.431 255 132 8 238 480 240 481 1.24e-35 141
MS.gene33343.t1 MTR_2g101290 37.121 264 145 7 210 467 392 640 1.25e-35 142
MS.gene33343.t1 MTR_2g078630 33.333 267 146 7 227 470 41 298 6.07e-35 140
MS.gene33343.t1 MTR_2g078630 33.333 267 146 7 227 470 569 826 7.69e-35 140
MS.gene33343.t1 MTR_7g078570 36.027 297 158 10 238 525 192 465 8.16e-35 139
MS.gene33343.t1 MTR_4g067100 36.032 247 140 6 232 469 374 611 1.06e-34 139
MS.gene33343.t1 MTR_4g067100 36.032 247 140 6 232 469 374 611 1.07e-34 139
MS.gene33343.t1 MTR_6g016600 36.948 249 142 6 235 478 314 552 1.80e-33 134
MS.gene33343.t1 MTR_1g069105 38.614 202 111 4 232 428 182 375 2.10e-33 131
MS.gene33343.t1 MTR_4g064350 35.216 301 163 10 234 525 316 593 2.73e-33 135
MS.gene33343.t1 MTR_5g075340 32.492 317 175 11 215 525 213 496 4.00e-33 134
MS.gene33343.t1 MTR_1g028390 35.793 271 152 8 227 493 318 570 1.88e-32 132
MS.gene33343.t1 MTR_3g062510 40.860 186 97 4 236 416 157 334 2.22e-32 128
MS.gene33343.t1 MTR_6g059690 37.255 255 135 8 238 480 197 438 3.13e-32 131
MS.gene33343.t1 MTR_5g069780 34.783 299 164 11 238 525 313 591 3.81e-32 131
MS.gene33343.t1 MTR_0376s0020 36.255 251 142 7 238 480 1 241 4.59e-32 130
MS.gene33343.t1 MTR_2g024440 34.677 248 138 6 238 474 296 530 9.83e-31 126
MS.gene33343.t1 MTR_2g024440 34.677 248 138 6 238 474 297 531 1.04e-30 126
MS.gene33343.t1 MTR_2g024440 34.677 248 138 6 238 474 214 448 1.14e-30 125
MS.gene33343.t1 MTR_3g023890 31.546 317 172 9 227 520 374 668 3.23e-30 125
MS.gene33343.t1 MTR_3g023890 30.952 294 166 11 240 508 94 375 9.78e-25 108
MS.gene33343.t1 MTR_3g462930 33.670 297 170 10 238 525 304 582 1.36e-29 124
MS.gene33343.t1 MTR_5g075360 33.221 298 169 10 232 525 12 283 1.88e-28 118
MS.gene33343.t1 MTR_5g075360 33.221 298 169 10 232 525 62 333 6.42e-28 117
MS.gene33343.t1 MTR_5g075360 33.221 298 169 10 232 525 188 459 7.51e-28 118
MS.gene33343.t1 MTR_8g023550 31.834 289 156 9 191 467 117 376 7.73e-28 115
MS.gene33343.t1 MTR_8g099605 33.730 252 137 7 235 469 401 639 1.14e-27 118
MS.gene33343.t1 MTR_5g075360 33.221 298 169 10 232 525 238 509 1.32e-27 117
MS.gene33343.t1 MTR_8g099605 33.730 252 137 7 235 469 160 398 1.50e-27 117
MS.gene33343.t1 MTR_3g096000 35.409 257 146 7 233 478 291 538 1.87e-27 117
MS.gene33343.t1 MTR_8g469460 33.559 295 132 10 238 525 207 444 3.72e-27 116
MS.gene33343.t1 MTR_7g088980 36.017 236 134 9 241 468 20 246 3.91e-27 115
MS.gene33343.t1 MTR_7g088980 29.435 248 121 6 227 470 275 472 2.52e-22 100
MS.gene33343.t1 MTR_3g104490 32.542 295 143 10 238 525 207 452 1.11e-26 114
MS.gene33343.t1 MTR_7g088980 35.211 213 124 6 262 468 68 272 1.55e-24 107
MS.gene33343.t1 MTR_7g088980 29.435 248 121 6 227 470 301 498 4.54e-22 100
MS.gene33343.t1 MTR_4g088885 33.333 267 140 12 269 514 256 505 8.62e-24 105
MS.gene33343.t1 MTR_8g056860 30.000 220 146 5 252 467 484 699 2.84e-22 101
MS.gene33343.t1 MTR_5g074850 32.653 196 120 5 275 467 542 728 8.18e-19 90.9
MS.gene33343.t1 MTR_1g044600 31.739 230 129 7 303 525 193 401 4.45e-18 87.4
MS.gene33343.t1 MTR_6g005760 27.488 211 117 6 273 458 362 561 4.04e-14 75.5
MS.gene33343.t1 MTR_6g005760 27.488 211 117 6 273 458 234 433 4.47e-14 75.1
MS.gene33343.t1 MTR_5g020530 27.830 212 112 7 273 457 387 584 5.51e-14 75.1
MS.gene33343.t1 MTR_3g076930 28.926 242 132 8 202 425 137 356 1.65e-13 73.2
MS.gene33343.t1 MTR_4g083460 28.400 250 109 9 240 467 839 1040 2.88e-12 70.1
MS.gene33343.t1 MTR_4g077880 25.943 212 120 6 273 458 368 568 9.36e-12 68.2
MS.gene33343.t1 MTR_4g112600 43.038 79 43 2 241 317 3 81 3.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33343.t1 AT1G80350 81.489 524 92 5 4 525 3 523 0.0 874
MS.gene33343.t1 AT2G34560 44.186 344 168 9 192 524 50 380 8.67e-92 286
MS.gene33343.t1 AT2G34560 44.186 344 168 9 192 524 59 389 1.15e-91 286
MS.gene33343.t1 AT2G27600 40.683 322 159 4 227 523 118 432 1.80e-82 263
MS.gene33343.t1 AT2G45500 42.151 344 174 8 185 524 31 353 8.60e-82 259
MS.gene33343.t1 AT2G45500 42.151 344 174 8 185 524 31 353 8.60e-82 259
MS.gene33343.t1 AT2G45500 42.151 344 174 8 185 524 164 486 5.33e-80 258
MS.gene33343.t1 AT2G45500 42.151 344 174 8 185 524 168 490 6.94e-80 258
MS.gene33343.t1 AT2G45500 42.151 344 174 8 185 524 174 496 8.94e-80 258
MS.gene33343.t1 AT3G27120 42.020 307 165 4 220 524 382 677 3.01e-78 259
MS.gene33343.t1 AT3G19740 39.863 291 162 5 237 523 700 981 1.22e-64 227
MS.gene33343.t1 AT4G28000 41.971 274 150 5 218 489 496 762 2.56e-63 221
MS.gene33343.t1 AT4G28000 41.971 274 150 5 218 489 496 762 3.58e-63 221
MS.gene33343.t1 AT4G28000 41.971 274 150 5 218 489 494 760 3.68e-63 221
MS.gene33343.t1 AT4G02480 39.241 316 171 6 222 523 943 1251 1.23e-62 222
MS.gene33343.t1 AT1G02890 40.000 315 170 7 222 523 924 1232 4.31e-62 221
MS.gene33343.t1 AT1G64110 38.462 325 175 7 218 523 495 813 7.18e-62 218
MS.gene33343.t1 AT1G64110 38.462 325 175 7 218 523 495 813 7.18e-62 218
MS.gene33343.t1 AT1G64110 38.462 325 175 7 218 523 497 815 7.33e-62 218
MS.gene33343.t1 AT1G64110 38.462 325 175 7 218 523 497 815 7.33e-62 218
MS.gene33343.t1 AT1G64110 38.462 325 175 7 218 523 492 810 8.32e-62 217
MS.gene33343.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene33343.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene33343.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene33343.t1 AT5G52882 44.094 254 133 5 219 470 494 740 1.82e-61 216
MS.gene33343.t1 AT1G50140 40.273 293 158 7 237 523 688 969 2.41e-61 218
MS.gene33343.t1 AT1G50140 40.273 293 158 7 237 523 688 969 2.41e-61 218
MS.gene33343.t1 AT4G24860 39.163 263 152 2 226 486 778 1034 2.91e-58 209
MS.gene33343.t1 AT4G24860 39.163 263 152 2 226 486 801 1057 3.58e-58 209
MS.gene33343.t1 AT4G24860 39.163 263 152 2 226 486 805 1061 4.85e-58 209
MS.gene33343.t1 AT4G24860 39.163 263 152 2 226 486 803 1059 4.92e-58 209
MS.gene33343.t1 AT5G03340 38.689 305 162 6 229 518 468 762 5.81e-56 201
MS.gene33343.t1 AT5G03340 40.541 259 139 5 218 470 181 430 1.87e-46 174
MS.gene33343.t1 AT3G09840 37.705 305 165 6 229 518 468 762 1.33e-53 194
MS.gene33343.t1 AT3G09840 40.541 259 139 5 218 470 181 430 1.24e-46 174
MS.gene33343.t1 AT3G53230 38.870 301 165 5 229 518 469 761 6.81e-53 192
MS.gene33343.t1 AT3G53230 40.927 259 138 5 218 470 182 431 5.40e-47 175
MS.gene33343.t1 AT4G27680 36.531 271 157 4 238 506 81 338 8.78e-51 179
MS.gene33343.t1 AT3G56690 39.933 298 155 8 229 517 712 994 8.64e-50 184
MS.gene33343.t1 AT3G56690 36.607 224 125 6 272 492 416 625 3.51e-32 132
MS.gene33343.t1 AT5G53540 36.604 265 153 5 238 500 84 335 7.12e-49 174
MS.gene33343.t1 AT1G62130 41.949 236 113 6 237 470 742 955 5.67e-48 179
MS.gene33343.t1 AT1G62130 41.949 236 113 6 237 470 749 962 6.28e-48 179
MS.gene33343.t1 AT5G19990 36.054 294 154 7 232 518 94 360 6.85e-47 167
MS.gene33343.t1 AT5G19990 36.054 294 154 7 232 518 152 418 1.00e-46 168
MS.gene33343.t1 AT5G19990 36.054 294 154 7 232 518 152 418 1.00e-46 168
MS.gene33343.t1 AT5G20000 36.054 294 154 7 232 518 152 418 1.26e-46 168
MS.gene33343.t1 AT5G43010 39.062 256 133 9 220 467 122 362 1.95e-46 167
MS.gene33343.t1 AT1G45000 39.062 256 133 9 220 467 122 362 2.27e-46 167
MS.gene33343.t1 AT1G02890 35.556 315 156 9 222 523 924 1204 1.23e-45 172
MS.gene33343.t1 AT1G03000 35.374 294 173 7 236 522 653 936 9.77e-45 169
MS.gene33343.t1 AT3G05530 38.683 243 134 5 232 468 162 395 4.89e-43 159
MS.gene33343.t1 AT1G09100 38.683 243 134 5 232 468 161 394 1.19e-42 157
MS.gene33343.t1 AT2G20140 37.860 243 138 4 232 469 179 413 2.03e-42 157
MS.gene33343.t1 AT4G29040 37.449 243 139 4 232 469 179 413 4.11e-42 156
MS.gene33343.t1 AT1G53750 35.986 289 159 8 191 467 117 391 1.11e-40 152
MS.gene33343.t1 AT1G50250 38.113 265 138 8 229 487 252 496 1.09e-39 154
MS.gene33343.t1 AT2G03670 34.000 300 175 7 180 472 232 515 1.59e-39 152
MS.gene33343.t1 AT2G03670 34.615 234 139 6 242 468 23 249 6.19e-30 124
MS.gene33343.t1 AT5G58290 34.874 238 142 4 236 468 150 379 2.81e-39 148
MS.gene33343.t1 AT5G42270 37.736 265 139 8 229 487 240 484 3.57e-39 152
MS.gene33343.t1 AT5G15250 37.037 243 137 6 232 468 215 447 5.06e-39 151
MS.gene33343.t1 AT2G26140 36.082 291 158 9 239 525 225 491 3.29e-38 149
MS.gene33343.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene33343.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene33343.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene33343.t1 AT1G53780 36.047 258 144 7 220 469 323 567 1.61e-36 143
MS.gene33343.t1 AT1G53780 36.047 258 144 7 220 469 323 567 1.61e-36 143
MS.gene33343.t1 AT2G30950 36.364 242 140 5 232 468 222 454 1.74e-36 144
MS.gene33343.t1 AT1G53780 36.047 258 144 7 220 469 322 566 1.82e-36 143
MS.gene33343.t1 AT1G53780 36.047 258 144 7 220 469 344 588 1.98e-36 143
MS.gene33343.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene33343.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene33343.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene33343.t1 AT3G01610 32.416 327 186 8 203 508 474 786 2.40e-36 144
MS.gene33343.t1 AT3G01610 33.106 293 179 5 232 508 224 515 3.51e-36 144
MS.gene33343.t1 AT3G01610 32.219 329 184 9 203 508 474 786 2.61e-36 144
MS.gene33343.t1 AT3G01610 33.106 293 179 5 232 508 224 515 4.11e-36 143
MS.gene33343.t1 AT5G15250 34.211 266 136 7 232 468 215 470 1.91e-35 139
MS.gene33343.t1 AT3G16290 37.121 264 145 7 210 467 384 632 4.66e-35 140
MS.gene33343.t1 AT1G07510 34.437 302 156 10 238 525 324 597 1.97e-34 138
MS.gene33343.t1 AT3G02450 37.751 249 140 6 235 478 328 566 2.21e-34 137
MS.gene33343.t1 AT1G05910 35.628 247 141 6 232 469 372 609 4.02e-34 138
MS.gene33343.t1 AT3G15120 34.454 238 138 6 240 468 718 946 1.53e-33 136
MS.gene33343.t1 AT3G15120 34.454 238 138 6 240 468 728 956 1.83e-33 136
MS.gene33343.t1 AT5G53170 36.822 258 141 8 240 493 361 600 3.56e-33 134
MS.gene33343.t1 AT2G29080 35.216 301 154 10 238 525 319 591 1.04e-32 133
MS.gene33343.t1 AT4G04180 34.894 235 129 6 238 461 316 537 5.46e-32 130
MS.gene33343.t1 AT4G04180 34.894 235 129 6 238 461 311 532 5.75e-32 130
MS.gene33343.t1 AT3G47060 38.333 240 129 7 238 468 322 551 1.34e-31 130
MS.gene33343.t1 AT2G03670 34.615 234 139 6 242 468 23 249 1.04e-30 124
MS.gene33343.t1 AT2G03670 34.634 205 121 5 180 379 232 428 2.79e-21 96.7
MS.gene33343.t1 AT5G58870 33.220 295 174 7 238 525 326 604 4.43e-30 125
MS.gene33343.t1 AT5G08470 33.333 237 140 5 240 470 834 1058 1.42e-29 124
MS.gene33343.t1 AT5G08470 33.333 237 140 5 240 470 843 1067 1.57e-29 124
MS.gene33343.t1 AT1G45000 41.420 169 86 6 220 382 122 283 5.07e-29 117
MS.gene33343.t1 AT5G64580 35.019 257 147 7 233 478 308 555 4.73e-27 116
MS.gene33343.t1 AT4G23940 33.865 251 136 7 235 468 424 661 7.33e-27 115
MS.gene33343.t1 AT4G04910 33.333 267 140 12 269 514 246 495 1.38e-25 111
MS.gene33343.t1 AT1G79560 31.818 198 127 5 275 468 527 720 3.93e-23 104
MS.gene33343.t1 AT1G79560 31.818 198 127 5 275 468 527 720 4.21e-23 104
MS.gene33343.t1 AT1G79560 29.218 243 151 7 243 468 482 720 5.12e-23 103
MS.gene33343.t1 AT5G08470 37.956 137 77 3 240 372 843 975 5.08e-19 91.7
MS.gene33343.t1 AT3G04340 33.831 201 110 9 235 425 778 965 2.17e-15 80.1
MS.gene33343.t1 AT2G18330 30.872 149 91 4 273 420 384 521 7.28e-13 71.6
MS.gene33343.t1 AT5G16930 26.415 212 119 7 273 458 397 597 1.41e-12 70.9
MS.gene33343.t1 AT4G36580 25.581 215 120 6 273 458 381 584 2.90e-12 69.7
MS.gene33343.t1 AT3G03060 29.114 158 100 4 273 429 385 531 1.67e-11 67.4

Find 147 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCGCCTCATTCCATTTA+AGG 0.090167 4.4:-87795195 None:intergenic
GAGAAGTGGTTTCATGAATT+TGG 0.158813 4.4:+87795356 MS.gene33343:CDS
TCTTTACGGCTCTCAAAATT+TGG 0.181779 4.4:-87794694 None:intergenic
TGTCGCGATGCTTCCTTAAA+TGG 0.182078 4.4:+87795182 MS.gene33343:CDS
AATCTAATCAAGATAGTAAA+TGG 0.189772 4.4:+87792793 MS.gene33343:CDS
AACGAAGATTTCGTAGAAAT+TGG 0.195781 4.4:-87792642 None:intergenic
TTCTATTTCATCAGGGCTTC+TGG 0.217335 4.4:+87794336 MS.gene33343:intron
AATTTCATCACGAGTCTTTC+CGG 0.227864 4.4:-87795222 None:intergenic
ATCCTTTAATTCGTGCAAAA+TGG 0.233606 4.4:+87792511 MS.gene33343:CDS
TCAAGCATTTCAGCCAATTC+AGG 0.249762 4.4:-87793398 None:intergenic
AGCAACTAGATGCGGATAAA+AGG 0.252571 4.4:+87792577 MS.gene33343:CDS
CCAAGACCATTACTAATTTC+CGG 0.282331 4.4:-87794446 None:intergenic
GAACTTCTGGTTCAGGTTGA+TGG 0.286049 4.4:+87794390 MS.gene33343:CDS
ACTTCTATCATCTTCTTTGA+TGG 0.304578 4.4:+87791496 MS.gene33343:CDS
TTATCCGGATCAACTCTTTA+CGG 0.305622 4.4:-87794708 None:intergenic
AAGCCGTTGTGCTTCCCTTA+TGG 0.308493 4.4:+87793501 MS.gene33343:CDS
CTGCTACTTTAGCTTCTAAA+TGG 0.310247 4.4:+87793966 MS.gene33343:CDS
GATGCACCACCTTTCTTTAC+CGG 0.324656 4.4:-87792915 None:intergenic
GTCCTTATGTTTGGTCCTCC+TGG 0.327313 4.4:+87793875 MS.gene33343:CDS
AAGGGTGAAGTCTGAACTTC+TGG 0.334804 4.4:+87794377 MS.gene33343:CDS
TGGAAAGGTGTCCTTATGTT+TGG 0.341007 4.4:+87793866 MS.gene33343:CDS
CCCACTTGACCACCCCTTCC+AGG 0.344566 4.4:-87792762 None:intergenic
AGAAGTGTCTTTCCAGTTCC+AGG 0.347867 4.4:-87793893 None:intergenic
CGGTGGTGGTGGTTCTTCAT+TGG 0.361816 4.4:+87791414 MS.gene33343:CDS
GAAGTCTGAACTTCTGGTTC+AGG 0.362123 4.4:+87794383 MS.gene33343:CDS
ATGGATGCCTGAATATTTCC+AGG 0.363539 4.4:+87793520 MS.gene33343:CDS
AAGGTTACCTGGAAATATTC+AGG 0.370724 4.4:-87793527 None:intergenic
GAATGTTAAGAAAGCTCTTT+CGG 0.384287 4.4:+87792536 MS.gene33343:CDS
ATGTTTGGTCCTCCTGGAAC+TGG 0.386041 4.4:+87793881 MS.gene33343:CDS
GTAAAGAAAGGTGGTGCATC+TGG 0.387564 4.4:+87792918 MS.gene33343:CDS
CGAAGGTCCTGACCCTGAAT+TGG 0.398187 4.4:+87793385 MS.gene33343:CDS
GGGATCATCAAAGGAAGAAT+TGG 0.407025 4.4:-87792700 None:intergenic
TGAAATTAAGAGTATGTCTA+AGG 0.408663 4.4:+87795238 MS.gene33343:CDS
GCAAGAGATTACGCTCTTGA+AGG 0.422552 4.4:+87791463 MS.gene33343:CDS
GGTGGTGGTTCTTCATTGGC+AGG 0.425015 4.4:+87791418 MS.gene33343:CDS
GAGAGCATGAATCATCTAGA+AGG 0.428309 4.4:+87794358 MS.gene33343:CDS
CAACAGTCTTCAAATTTATC+CGG 0.432454 4.4:-87794723 None:intergenic
CGTCGAACTGATGGCTATAG+TGG 0.438729 4.4:+87795140 MS.gene33343:CDS
TCAAAATCACACATGGCAAC+AGG 0.440279 4.4:-87795278 None:intergenic
GAAGTAGGATACTCATCTAA+TGG 0.443032 4.4:-87792675 None:intergenic
GCAACTAGATGCGGATAAAA+GGG 0.454010 4.4:+87792578 MS.gene33343:CDS
GAAATATTCAGGCATCCATA+AGG 0.458081 4.4:-87793516 None:intergenic
TCATCAATGAAAATTGTACT+TGG 0.458381 4.4:-87794046 None:intergenic
GACGGAGGACGTCTTCCAAT+CGG 0.458534 4.4:-87792615 None:intergenic
GTGCTGTTGCACAAATCAAC+AGG 0.461564 4.4:+87791518 MS.gene33343:CDS
ATTTCAGCCAATTCAGGGTC+AGG 0.462738 4.4:-87793392 None:intergenic
CAAGCATTTCAGCCAATTCA+GGG 0.466679 4.4:-87793397 None:intergenic
ACTGGCCGTGGCGCAAAGGC+TGG 0.474587 4.4:+87792849 MS.gene33343:CDS
AGAACAATGGCCGGTGGTGG+TGG 0.478709 4.4:+87791403 None:intergenic
ACGGAGGACGTCTTCCAATC+GGG 0.481723 4.4:-87792614 None:intergenic
AATTGGCTGAAATGCTTGAA+AGG 0.482451 4.4:+87793402 MS.gene33343:CDS
CTTCTACTAGTATCTCTACT+AGG 0.483702 4.4:-87792738 None:intergenic
AGGCTGGTGGTGCTACTAGC+AGG 0.485231 4.4:+87792865 MS.gene33343:CDS
AATGTAATGCAGGAGAAGAC+TGG 0.486029 4.4:+87794648 MS.gene33343:intron
TTCGTAGAAATTGGAGGAGA+CGG 0.495797 4.4:-87792633 None:intergenic
CCGGAAATTAGTAATGGTCT+TGG 0.496592 4.4:+87794446 MS.gene33343:CDS
TTCCAGGAGGACCAAACATA+AGG 0.497922 4.4:-87793877 None:intergenic
TTCAGGGAATTAGAAGACCT+TGG 0.498155 4.4:+87793846 MS.gene33343:intron
AAACCTCTCCTGGAGTAAGA+TGG 0.502693 4.4:+87793435 MS.gene33343:CDS
TAGAATGGTGATGGTGAAGA+TGG 0.504832 4.4:+87793341 MS.gene33343:intron
ATCTAATCAAGATAGTAAAT+GGG 0.505265 4.4:+87792794 MS.gene33343:CDS
ACCTGGAAGGGGTGGTCAAG+TGG 0.507866 4.4:+87792761 MS.gene33343:CDS
GAAGATTTCGTAGAAATTGG+AGG 0.510508 4.4:-87792639 None:intergenic
AGAGCCGTAAAGAGTTGATC+CGG 0.511678 4.4:+87794704 MS.gene33343:CDS
CAATGAAGAACCACCACCAC+CGG 0.515825 4.4:-87791413 None:intergenic
CGGCTCTCAAAATTTGGAAG+AGG 0.517636 4.4:-87794688 None:intergenic
GATGTGTTAGAAACCTCTCC+TGG 0.517926 4.4:+87793425 MS.gene33343:CDS
AAATATTCAGGCATCCATAA+GGG 0.520528 4.4:-87793515 None:intergenic
TTGATTCCCTATGCAACGCT+AGG 0.521036 4.4:+87794071 MS.gene33343:CDS
GTAAGATGGGATGATGTTGC+AGG 0.524094 4.4:+87793449 MS.gene33343:CDS
AACCTCTCCTGGAGTAAGAT+GGG 0.525804 4.4:+87793436 MS.gene33343:CDS
AGCCTTTGCGCCACGGCCAG+TGG 0.526659 4.4:-87792847 None:intergenic
CCTTTGATGATCCCGACGTA+TGG 0.526767 4.4:+87792709 MS.gene33343:CDS
GAGAGAACAATGGCCGGTGG+TGG 0.529484 4.4:+87791400 None:intergenic
GGGGTGGTCAAGTGGGTACT+CGG 0.534251 4.4:+87792769 MS.gene33343:CDS
CTAGGTGGCCTCCATACGTC+GGG 0.534872 4.4:-87792720 None:intergenic
TACCACTGGCCGTGGCGCAA+AGG 0.538736 4.4:+87792845 MS.gene33343:CDS
GGCTCTCAAAATTTGGAAGA+GGG 0.541378 4.4:-87794687 None:intergenic
GAAGTGGCTCGTCGAACTGA+TGG 0.544733 4.4:+87795131 MS.gene33343:CDS
GGATCAACTCCGGTAAAGAA+AGG 0.545338 4.4:+87792906 MS.gene33343:CDS
AAAGCAGTTGCTACTGAATG+TGG 0.546539 4.4:+87793920 MS.gene33343:CDS
TGGCAGCTACTAACTTCCCA+TGG 0.547739 4.4:+87794466 MS.gene33343:CDS
TGATTCCCTATGCAACGCTA+GGG 0.550187 4.4:+87794072 MS.gene33343:CDS
GGTCCAACGAAGTGTTTCTC+CGG 0.550231 4.4:+87795316 MS.gene33343:CDS
TACTAGTAGAAGACCTGGAA+GGG 0.551379 4.4:+87792749 MS.gene33343:CDS
GGCCGTGGCGCAAAGGCTGG+TGG 0.554155 4.4:+87792852 MS.gene33343:CDS
AGTGCCTCATCTATGTCCCA+TGG 0.556771 4.4:-87794483 None:intergenic
GGAATGAGGCGAAAGATAGC+CGG 0.558593 4.4:+87795203 MS.gene33343:CDS
ATTGGCTGAAATGCTTGAAA+GGG 0.558913 4.4:+87793403 MS.gene33343:CDS
AGAATGGTGATGGTGAAGAT+GGG 0.559086 4.4:+87793342 MS.gene33343:intron
ACATCATCCCATCTTACTCC+AGG 0.560188 4.4:-87793443 None:intergenic
AACAGTGCAACAAATGAAGA+TGG 0.563634 4.4:+87794420 MS.gene33343:CDS
CCTGGAAGGGGTGGTCAAGT+GGG 0.564850 4.4:+87792762 MS.gene33343:CDS
CACCACCAGCCTTTGCGCCA+CGG 0.565084 4.4:-87792854 None:intergenic
CAACAAATGAAGATGGTAGC+CGG 0.566756 4.4:+87794427 MS.gene33343:CDS
GGGACATAGATGAGGCACTA+AGG 0.566845 4.4:+87794487 MS.gene33343:CDS
ATTCATGAAACCACTTCTCA+TGG 0.568402 4.4:-87795352 None:intergenic
AAGGAAGAATTGGATGAAGT+AGG 0.568473 4.4:-87792690 None:intergenic
ATATTGAACGCCATGAGAAG+TGG 0.568930 4.4:+87795342 MS.gene33343:CDS
TGATGTCAACATAGATGAAG+TGG 0.569864 4.4:+87795115 MS.gene33343:CDS
GCGTTTAAAGATAACCCGAT+TGG 0.569886 4.4:+87792600 MS.gene33343:CDS
AGAGATACTAGTAGAAGACC+TGG 0.573343 4.4:+87792744 MS.gene33343:CDS
ACAACAAGTACCACTGGCCG+TGG 0.574301 4.4:+87792837 MS.gene33343:CDS
GGAAGCATCGCGACAGACGT+TGG 0.576627 4.4:-87795174 None:intergenic
TCATGGCGTTCAATATCAGC+CGG 0.580580 4.4:-87795335 None:intergenic
GATAAATTTGAAGACTGTTG+AGG 0.583479 4.4:+87794726 MS.gene33343:CDS
CCATACGTCGGGATCATCAA+AGG 0.585164 4.4:-87792709 None:intergenic
GTGCCTCATCTATGTCCCAT+GGG 0.589159 4.4:-87794482 None:intergenic
ACTTTAGCTTCTAAATGGCG+TGG 0.593643 4.4:+87793971 MS.gene33343:CDS
ACAAAGACAACAAGTACCAC+TGG 0.602530 4.4:+87792831 MS.gene33343:CDS
ATCCCATCTTACTCCAGGAG+AGG 0.604451 4.4:-87793438 None:intergenic
TTGATGATCCCGACGTATGG+AGG 0.605531 4.4:+87792712 MS.gene33343:CDS
CAGCCGGAGAAACACTTCGT+TGG 0.605662 4.4:-87795319 None:intergenic
GCTACTAGCAGGACTAACTC+AGG 0.606405 4.4:+87792876 MS.gene33343:CDS
ATGCTTCCTTAAATGGAATG+AGG 0.614849 4.4:+87795189 MS.gene33343:CDS
ATACTAGTAGAAGACCTGGA+AGG 0.618546 4.4:+87792748 MS.gene33343:CDS
TGGTAGCCGGAAATTAGTAA+TGG 0.620174 4.4:+87794440 MS.gene33343:CDS
ACTAGGTGGCCTCCATACGT+CGG 0.620179 4.4:-87792721 None:intergenic
GGCAGCTACTAACTTCCCAT+GGG 0.620186 4.4:+87794467 MS.gene33343:CDS
AAGCAGTTGCTACTGAATGT+GGG 0.621604 4.4:+87793921 MS.gene33343:CDS
GTAGAAATTGGAGGAGACGG+AGG 0.624106 4.4:-87792630 None:intergenic
CAAGATAGTAAATGGGCTCG+AGG 0.624871 4.4:+87792801 MS.gene33343:CDS
AGGACTAACTCAGGGGCTCG+AGG 0.625628 4.4:+87792885 MS.gene33343:CDS
AACATAAGGACACCTTTCCA+AGG 0.627199 4.4:-87793863 None:intergenic
AGTAGAAGACCTGGAAGGGG+TGG 0.628330 4.4:+87792753 MS.gene33343:CDS
GTCTAAGGATGAGATTTCAA+AGG 0.631259 4.4:+87795253 MS.gene33343:CDS
TTCATCTATGTTGACATCAG+CGG 0.632080 4.4:-87795111 None:intergenic
AGAGCATGAATCATCTAGAA+GGG 0.636154 4.4:+87794359 MS.gene33343:CDS
CTACTAGCAGGACTAACTCA+GGG 0.641102 4.4:+87792877 MS.gene33343:CDS
AGTTGTAAAGCAACTAGATG+CGG 0.641597 4.4:+87792569 MS.gene33343:CDS
GATTCCCTATGCAACGCTAG+GGG 0.644904 4.4:+87794073 MS.gene33343:CDS
TGCTTCTTCAAAATCACACA+TGG 0.645740 4.4:-87795285 None:intergenic
TGTTAAGAAAGCTCTTTCGG+AGG 0.646855 4.4:+87792539 MS.gene33343:CDS
AGAGAGAGAACAATGGCCGG+TGG 0.650015 4.4:+87791397 None:intergenic
ACTAGTAGAAGACCTGGAAG+GGG 0.653802 4.4:+87792750 MS.gene33343:CDS
GCGTGGAGAAAGTGAGCGAA+TGG 0.660809 4.4:+87793988 MS.gene33343:CDS
TCAACTCCGGTAAAGAAAGG+TGG 0.662437 4.4:+87792909 MS.gene33343:CDS
ATTCCCTATGCAACGCTAGG+GGG 0.666277 4.4:+87794074 MS.gene33343:CDS
CTACTAGTATCTCTACTAGG+TGG 0.666728 4.4:-87792735 None:intergenic
CATCCATAAGGGAAGCACAA+CGG 0.667497 4.4:-87793504 None:intergenic
GGAATTAGAAGACCTTGGAA+AGG 0.669356 4.4:+87793851 MS.gene33343:CDS
CTTCCCATGGGACATAGATG+AGG 0.669966 4.4:+87794479 MS.gene33343:CDS
AGGGGCTCGAGGATCAACTC+CGG 0.692840 4.4:+87792896 MS.gene33343:CDS
TCAAATAAGAGAATATACGA+AGG 0.694533 4.4:+87793368 MS.gene33343:CDS
TACTAGCAGGACTAACTCAG+GGG 0.729938 4.4:+87792878 MS.gene33343:CDS
AGTGTCTTTCCAGTTCCAGG+AGG 0.734815 4.4:-87793890 None:intergenic
GAGAAAGTGAGCGAATGGTG+CGG 0.752385 4.4:+87793993 MS.gene33343:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATCAAAATAATTAAA+TGG - chr4.4:87791752-87791771 None:intergenic 10.0%
!! AAACATCAAAATAATTAAAT+GGG - chr4.4:87791751-87791770 None:intergenic 10.0%
!! TTTACTACATTATAAATAAT+GGG + chr4.4:87791584-87791603 MS.gene33343:intron 10.0%
!! TTTGTTTCATTATAAATAAT+GGG + chr4.4:87791697-87791716 MS.gene33343:intron 10.0%
!!! TTTTACTACATTATAAATAA+TGG + chr4.4:87791583-87791602 MS.gene33343:intron 10.0%
!!! TTTTGTTTCATTATAAATAA+TGG + chr4.4:87791696-87791715 MS.gene33343:intron 10.0%
!! ATATATATTACTTAATGAAC+TGG - chr4.4:87794216-87794235 None:intergenic 15.0%
!! ATTCCTACATATTATTTATT+CGG + chr4.4:87793039-87793058 MS.gene33343:intron 15.0%
!! CATTACATTAAATATGAAAA+TGG - chr4.4:87794637-87794656 None:intergenic 15.0%
!! TTACACAACAAAAATTATAA+GGG - chr4.4:87794804-87794823 None:intergenic 15.0%
!! TTTACACAACAAAAATTATA+AGG - chr4.4:87794805-87794824 None:intergenic 15.0%
!!! AACTTAAAATACAATTTTTG+TGG + chr4.4:87792000-87792019 MS.gene33343:intron 15.0%
!!! GTTTAAAGCTTTATTTTATT+AGG + chr4.4:87794870-87794889 MS.gene33343:intron 15.0%
!!! TTATAATTTTTGTTGTGTAA+AGG + chr4.4:87794804-87794823 MS.gene33343:intron 15.0%
!! AACAAAACTTAGATACATTT+CGG + chr4.4:87791960-87791979 MS.gene33343:intron 20.0%
!! AACAAACTTTACAATGAAAA+TGG - chr4.4:87791676-87791695 None:intergenic 20.0%
!! AATCTAATCAAGATAGTAAA+TGG + chr4.4:87792793-87792812 MS.gene33343:CDS 20.0%
!! ACAAACTTTACAATGAAAAT+GGG - chr4.4:87791675-87791694 None:intergenic 20.0%
!! ACACACATCAAAATAATTAA+TGG - chr4.4:87791650-87791669 None:intergenic 20.0%
!! ATAACACATTGAGAAAATTA+TGG + chr4.4:87792297-87792316 MS.gene33343:intron 20.0%
!! ATCTAATCAAGATAGTAAAT+GGG + chr4.4:87792794-87792813 MS.gene33343:CDS 20.0%
!! ATGAAATTATTATTGCGAAT+AGG + chr4.4:87793738-87793757 MS.gene33343:intron 20.0%
!! CACACATCAAAATAATTAAT+GGG - chr4.4:87791649-87791668 None:intergenic 20.0%
!! TTCTAAACTATTTATATTGC+TGG + chr4.4:87794535-87794554 MS.gene33343:intron 20.0%
!! TTTCATATTTAATGTAATGC+AGG + chr4.4:87794638-87794657 MS.gene33343:intron 20.0%
!!! AGCTTTATTTTATTAGGATT+TGG + chr4.4:87794876-87794895 MS.gene33343:intron 20.0%
!!! CATTATTTCTGTTTTTTTCA+GGG + chr4.4:87793830-87793849 MS.gene33343:intron 20.0%
!!! GAACAAACTTTAGAATAAAA+AGG - chr4.4:87791563-87791582 None:intergenic 20.0%
!!! GTATTTGTACTTTTATAGAA+TGG + chr4.4:87793326-87793345 MS.gene33343:intron 20.0%
!!! TAATTGAAGTTTTAAGTTGA+TGG + chr4.4:87791876-87791895 MS.gene33343:intron 20.0%
!!! TCATTATTTCTGTTTTTTTC+AGG + chr4.4:87793829-87793848 MS.gene33343:intron 20.0%
!!! TGATATTGATAGTAGAAATT+CGG - chr4.4:87794834-87794853 None:intergenic 20.0%
!!! TTATTCAATTATGGTTTTGT+AGG - chr4.4:87793098-87793117 None:intergenic 20.0%
!!! TTTTCTTGATATGAATTAAG+TGG + chr4.4:87791927-87791946 MS.gene33343:intron 20.0%
!!! TTTTGTGAATGTTTTTTTGT+TGG + chr4.4:87794960-87794979 MS.gene33343:intron 20.0%
!!! TTTTTAACTGTTTCATTTCT+AGG + chr4.4:87793777-87793796 MS.gene33343:intron 20.0%
! AAATACCATTCAAAACCATA+AGG - chr4.4:87793312-87793331 None:intergenic 25.0%
! ACTACAACACAATACTTAAA+AGG - chr4.4:87792093-87792112 None:intergenic 25.0%
! AGTTCTTGATATCAATCAAT+TGG + chr4.4:87792229-87792248 MS.gene33343:intron 25.0%
! ATTAACTACAACACAAATCT+AGG - chr4.4:87792441-87792460 None:intergenic 25.0%
! ATTTGATTGAATTCACTAGA+AGG + chr4.4:87794311-87794330 MS.gene33343:intron 25.0%
! CAGAAGAACTTATTCAATTA+TGG - chr4.4:87793107-87793126 None:intergenic 25.0%
! GTTGTAAGTTTCAATTTCTA+TGG + chr4.4:87792963-87792982 MS.gene33343:intron 25.0%
! TACTTAAAAGGATAAAACCT+AGG - chr4.4:87792081-87792100 None:intergenic 25.0%
! TCAAATAAGAGAATATACGA+AGG + chr4.4:87793368-87793387 MS.gene33343:CDS 25.0%
! TCATCAATGAAAATTGTACT+TGG - chr4.4:87794049-87794068 None:intergenic 25.0%
! TGAATTATAACAGTAGTTGA+TGG + chr4.4:87792176-87792195 MS.gene33343:intron 25.0%
! TTAACTACAACACAAATCTA+GGG - chr4.4:87792440-87792459 None:intergenic 25.0%
! TTGAGAAAATTATGGATTTC+AGG + chr4.4:87792305-87792324 MS.gene33343:intron 25.0%
! TTTGATTGAATTCACTAGAA+GGG + chr4.4:87794312-87794331 MS.gene33343:intron 25.0%
!! AATCAATTGGAGTTTTTGTT+TGG + chr4.4:87792242-87792261 MS.gene33343:intron 25.0%
!! CTTAAAAAATACACCTTTTG+TGG + chr4.4:87792272-87792291 MS.gene33343:intron 25.0%
!! GTTTAGAATTCTGATAATTG+TGG + chr4.4:87793597-87793616 MS.gene33343:intron 25.0%
!! TGAAATTAAGAGTATGTCTA+AGG + chr4.4:87795238-87795257 MS.gene33343:CDS 25.0%
!!! AATGTCATTTTTTGTTTCAC+TGG - chr4.4:87794914-87794933 None:intergenic 25.0%
!!! TTTTTCTTATCTTGACTTGT+TGG + chr4.4:87794241-87794260 MS.gene33343:intron 25.0%
AAATATTCAGGCATCCATAA+GGG - chr4.4:87793518-87793537 None:intergenic 30.0%
AACAGAAATAATGAGCTCAA+CGG - chr4.4:87793823-87793842 None:intergenic 30.0%
AACGAAGATTTCGTAGAAAT+TGG - chr4.4:87792645-87792664 None:intergenic 30.0%
AAGTGCAGTTTATTGAAAGT+GGG + chr4.4:87795012-87795031 MS.gene33343:intron 30.0%
ACTTCTATCATCTTCTTTGA+TGG + chr4.4:87791496-87791515 MS.gene33343:CDS 30.0%
AGACACAGATAACTAATCAA+AGG - chr4.4:87794570-87794589 None:intergenic 30.0%
AGTATTGTGTTGTAGTTAGT+TGG + chr4.4:87792097-87792116 MS.gene33343:intron 30.0%
ATCCTTTAATTCGTGCAAAA+TGG + chr4.4:87792511-87792530 MS.gene33343:CDS 30.0%
ATTACTGTCTTGGCTTATAT+AGG + chr4.4:87794765-87794784 MS.gene33343:intron 30.0%
CAACAGTCTTCAAATTTATC+CGG - chr4.4:87794726-87794745 None:intergenic 30.0%
CAATGTGTTATAACCACAAA+AGG - chr4.4:87792288-87792307 None:intergenic 30.0%
CCACCGAATAAATAATATGT+AGG - chr4.4:87793045-87793064 None:intergenic 30.0%
CCTACATATTATTTATTCGG+TGG + chr4.4:87793042-87793061 MS.gene33343:intron 30.0%
CTCTGAATTTGTACTCTATT+CGG + chr4.4:87794269-87794288 MS.gene33343:intron 30.0%
CTTTCAATAAACTGCACTTA+TGG - chr4.4:87795011-87795030 None:intergenic 30.0%
GAATGTTAAGAAAGCTCTTT+CGG + chr4.4:87792536-87792555 MS.gene33343:CDS 30.0%
GATAAATTTGAAGACTGTTG+AGG + chr4.4:87794726-87794745 MS.gene33343:CDS 30.0%
TAAGTGCAGTTTATTGAAAG+TGG + chr4.4:87795011-87795030 MS.gene33343:intron 30.0%
TATGGATTTCAGGAAATCAT+GGG + chr4.4:87792315-87792334 MS.gene33343:intron 30.0%
TTAGCATTGTAACATCAAAG+AGG + chr4.4:87791782-87791801 MS.gene33343:intron 30.0%
TTATGGATTTCAGGAAATCA+TGG + chr4.4:87792314-87792333 MS.gene33343:intron 30.0%
TTTAATGTTTAGACCCTGAT+TGG + chr4.4:87793663-87793682 MS.gene33343:intron 30.0%
TTTGAATCTTGTGTGATTTC+AGG + chr4.4:87792469-87792488 MS.gene33343:intron 30.0%
! AGAGTATAGAATGATGGTTT+TGG + chr4.4:87793181-87793200 MS.gene33343:intron 30.0%
! ATCCATTTTGCACGAATTAA+AGG - chr4.4:87792516-87792535 None:intergenic 30.0%
! CCAAAAAGAGTATAGAATGA+TGG + chr4.4:87793175-87793194 MS.gene33343:intron 30.0%
! CCATCATTCTATACTCTTTT+TGG - chr4.4:87793178-87793197 None:intergenic 30.0%
! GTACTTTTATAGAATGGTGA+TGG + chr4.4:87793332-87793351 MS.gene33343:intron 30.0%
!! CATTTGTTGTTTAGTCCTTA+TGG + chr4.4:87793294-87793313 MS.gene33343:intron 30.0%
!!! GTTGTTTTTCATTACTGTCT+TGG + chr4.4:87794755-87794774 MS.gene33343:intron 30.0%
!!! GTTTTAAGTTGATGGATCTT+TGG + chr4.4:87791884-87791903 MS.gene33343:intron 30.0%
!!! TTAGTCCTTATGGTTTTGAA+TGG + chr4.4:87793304-87793323 MS.gene33343:intron 30.0%
!!! TTTTGAAGAAGCATTGGTAA+AGG + chr4.4:87795295-87795314 MS.gene33343:CDS 30.0%
AACAGTGCAACAAATGAAGA+TGG + chr4.4:87794420-87794439 MS.gene33343:CDS 35.0%
AAGGAAGAATTGGATGAAGT+AGG - chr4.4:87792693-87792712 None:intergenic 35.0%
AAGGTTACCTGGAAATATTC+AGG - chr4.4:87793530-87793549 None:intergenic 35.0%
AATTGGCTGAAATGCTTGAA+AGG + chr4.4:87793402-87793421 MS.gene33343:CDS 35.0%
AATTTCATCACGAGTCTTTC+CGG - chr4.4:87795225-87795244 None:intergenic 35.0%
ACGGAACAAGTCTAATAGAA+TGG - chr4.4:87793804-87793823 None:intergenic 35.0%
ACTGTTGTGTTGTAGTTAGT+TGG + chr4.4:87792400-87792419 MS.gene33343:intron 35.0%
AGAGCATGAATCATCTAGAA+GGG + chr4.4:87794359-87794378 MS.gene33343:CDS 35.0%
AGTGCAGTTTATTGAAAGTG+GGG + chr4.4:87795013-87795032 MS.gene33343:intron 35.0%
AGTTGTAAAGCAACTAGATG+CGG + chr4.4:87792569-87792588 MS.gene33343:CDS 35.0%
ATGCTTCCTTAAATGGAATG+AGG + chr4.4:87795189-87795208 MS.gene33343:CDS 35.0%
ATTCATGAAACCACTTCTCA+TGG - chr4.4:87795355-87795374 None:intergenic 35.0%
ATTCTAAACTTCAGACAAGC+AGG - chr4.4:87793586-87793605 None:intergenic 35.0%
ATTGGCTGAAATGCTTGAAA+GGG + chr4.4:87793403-87793422 MS.gene33343:CDS 35.0%
CCAAGACCATTACTAATTTC+CGG - chr4.4:87794449-87794468 None:intergenic 35.0%
CTGATTATATAGTCTGTCCT+AGG + chr4.4:87794184-87794203 MS.gene33343:intron 35.0%
CTGTTGTGTTGTAGTTAGTT+GGG + chr4.4:87792401-87792420 MS.gene33343:intron 35.0%
CTTCTACTAGTATCTCTACT+AGG - chr4.4:87792741-87792760 None:intergenic 35.0%
GAAATATTCAGGCATCCATA+AGG - chr4.4:87793519-87793538 None:intergenic 35.0%
GAAGATTTCGTAGAAATTGG+AGG - chr4.4:87792642-87792661 None:intergenic 35.0%
GAAGTAGGATACTCATCTAA+TGG - chr4.4:87792678-87792697 None:intergenic 35.0%
GAGAAGTGGTTTCATGAATT+TGG + chr4.4:87795356-87795375 MS.gene33343:CDS 35.0%
GTCTAAGGATGAGATTTCAA+AGG + chr4.4:87795253-87795272 MS.gene33343:CDS 35.0%
GTTCATCAAAAAGCCAATCA+GGG - chr4.4:87793679-87793698 None:intergenic 35.0%
TAATGAACTGGATACAACCT+AGG - chr4.4:87794204-87794223 None:intergenic 35.0%
TCTTTACGGCTCTCAAAATT+TGG - chr4.4:87794697-87794716 None:intergenic 35.0%
TGATCGTATCATCTTGTATC+AGG + chr4.4:87795085-87795104 MS.gene33343:intron 35.0%
TGATGTCAACATAGATGAAG+TGG + chr4.4:87795115-87795134 MS.gene33343:CDS 35.0%
TGCTTCTTCAAAATCACACA+TGG - chr4.4:87795288-87795307 None:intergenic 35.0%
TGTGTTGTAGTTAGTTGGTT+TGG + chr4.4:87792102-87792121 MS.gene33343:intron 35.0%
TGTTCATCAAAAAGCCAATC+AGG - chr4.4:87793680-87793699 None:intergenic 35.0%
TTATCCGGATCAACTCTTTA+CGG - chr4.4:87794711-87794730 None:intergenic 35.0%
TTCATCTATGTTGACATCAG+CGG - chr4.4:87795114-87795133 None:intergenic 35.0%
TTTGTACTCTATTCGGATTC+TGG + chr4.4:87794276-87794295 MS.gene33343:intron 35.0%
! TTTGGAGTGAGAATTGTCTA+AGG - chr4.4:87793549-87793568 None:intergenic 35.0%
!! AACAATACGAAAAGCACCAA+AGG + chr4.4:87792048-87792067 MS.gene33343:intron 35.0%
!! ACAATACGAAAAGCACCAAA+GGG + chr4.4:87792049-87792068 MS.gene33343:intron 35.0%
!! CAGGTTTTTCTGAGAACATT+TGG - chr4.4:87793567-87793586 None:intergenic 35.0%
!! CTGCTACTTTAGCTTCTAAA+TGG + chr4.4:87793966-87793985 MS.gene33343:CDS 35.0%
!! GTGTGATTTTGAAGAAGCAT+TGG + chr4.4:87795289-87795308 MS.gene33343:CDS 35.0%
AAACTACCCAAACAGTAGTC+AGG - chr4.4:87793256-87793275 None:intergenic 40.0%
AAAGCAGTTGCTACTGAATG+TGG + chr4.4:87793920-87793939 MS.gene33343:CDS 40.0%
AACATAAGGACACCTTTCCA+AGG - chr4.4:87793866-87793885 None:intergenic 40.0%
AACTACCCAAACAGTAGTCA+GGG - chr4.4:87793255-87793274 None:intergenic 40.0%
AAGCAGTTGCTACTGAATGT+GGG + chr4.4:87793921-87793940 MS.gene33343:CDS 40.0%
AATGTAATGCAGGAGAAGAC+TGG + chr4.4:87794648-87794667 MS.gene33343:intron 40.0%
ACAAAGACAACAAGTACCAC+TGG + chr4.4:87792831-87792850 MS.gene33343:CDS 40.0%
AGAAGGGCTTCTATTTCATC+AGG + chr4.4:87794328-87794347 MS.gene33343:intron 40.0%
AGAGATACTAGTAGAAGACC+TGG + chr4.4:87792744-87792763 MS.gene33343:CDS 40.0%
AGCAACTAGATGCGGATAAA+AGG + chr4.4:87792577-87792596 MS.gene33343:CDS 40.0%
ATACTAGTAGAAGACCTGGA+AGG + chr4.4:87792748-87792767 MS.gene33343:CDS 40.0%
ATATTGAACGCCATGAGAAG+TGG + chr4.4:87795342-87795361 MS.gene33343:CDS 40.0%
ATGGATGCCTGAATATTTCC+AGG + chr4.4:87793520-87793539 MS.gene33343:CDS 40.0%
CAACAAATGAAGATGGTAGC+CGG + chr4.4:87794427-87794446 MS.gene33343:CDS 40.0%
CAAGCATTTCAGCCAATTCA+GGG - chr4.4:87793400-87793419 None:intergenic 40.0%
CCGGAAATTAGTAATGGTCT+TGG + chr4.4:87794446-87794465 MS.gene33343:CDS 40.0%
CTACTAGTATCTCTACTAGG+TGG - chr4.4:87792738-87792757 None:intergenic 40.0%
CTTATCCCTGACTACTGTTT+GGG + chr4.4:87793247-87793266 MS.gene33343:intron 40.0%
CTTTCGCCTCATTCCATTTA+AGG - chr4.4:87795198-87795217 None:intergenic 40.0%
GAAGGGCTTCTATTTCATCA+GGG + chr4.4:87794329-87794348 MS.gene33343:intron 40.0%
GCAACTAGATGCGGATAAAA+GGG + chr4.4:87792578-87792597 MS.gene33343:CDS 40.0%
GCGAATAGGCTCATGTTAAT+AGG + chr4.4:87793752-87793771 MS.gene33343:intron 40.0%
GCGTTTAAAGATAACCCGAT+TGG + chr4.4:87792600-87792619 MS.gene33343:CDS 40.0%
GGAATTAGAAGACCTTGGAA+AGG + chr4.4:87793851-87793870 MS.gene33343:CDS 40.0%
GGCTCTCAAAATTTGGAAGA+GGG - chr4.4:87794690-87794709 None:intergenic 40.0%
GGGATCATCAAAGGAAGAAT+TGG - chr4.4:87792703-87792722 None:intergenic 40.0%
TACTAGTAGAAGACCTGGAA+GGG + chr4.4:87792749-87792768 MS.gene33343:CDS 40.0%
TCAAAATCACACATGGCAAC+AGG - chr4.4:87795281-87795300 None:intergenic 40.0%
TCAAGCATTTCAGCCAATTC+AGG - chr4.4:87793401-87793420 None:intergenic 40.0%
TGGTAGCCGGAAATTAGTAA+TGG + chr4.4:87794440-87794459 MS.gene33343:CDS 40.0%
TGTGTTGTAGTTAGTTGGGT+TGG + chr4.4:87792405-87792424 MS.gene33343:intron 40.0%
TGTTAAGAAAGCTCTTTCGG+AGG + chr4.4:87792539-87792558 MS.gene33343:CDS 40.0%
TTCAGGGAATTAGAAGACCT+TGG + chr4.4:87793846-87793865 MS.gene33343:intron 40.0%
TTCGTAGAAATTGGAGGAGA+CGG - chr4.4:87792636-87792655 None:intergenic 40.0%
TTCTATTTCATCAGGGCTTC+TGG + chr4.4:87794336-87794355 MS.gene33343:intron 40.0%
! ACTTTAGCTTCTAAATGGCG+TGG + chr4.4:87793971-87793990 MS.gene33343:CDS 40.0%
! ATTTCTATGGAGCATTCTGC+TGG + chr4.4:87792976-87792995 MS.gene33343:intron 40.0%
! GAGAATTGTCTAAGGTTACC+TGG - chr4.4:87793541-87793560 None:intergenic 40.0%
! GAGAGCATGAATCATCTAGA+AGG + chr4.4:87794358-87794377 MS.gene33343:CDS 40.0%
! GAGGCACTAAGGTTTGTATT+TGG + chr4.4:87794498-87794517 MS.gene33343:intron 40.0%
! TTCCTTAAGTGCTTTTCGTG+TGG - chr4.4:87792356-87792375 None:intergenic 40.0%
!! AACCACACGAAAAGCACTTA+AGG + chr4.4:87792351-87792370 MS.gene33343:intron 40.0%
!! AGAATGGTGATGGTGAAGAT+GGG + chr4.4:87793342-87793361 MS.gene33343:intron 40.0%
!! TAGAATGGTGATGGTGAAGA+TGG + chr4.4:87793341-87793360 MS.gene33343:intron 40.0%
!! TGGAAAGGTGTCCTTATGTT+TGG + chr4.4:87793866-87793885 MS.gene33343:CDS 40.0%
AAACCTAGGTGCATTCCCTT+TGG - chr4.4:87792067-87792086 None:intergenic 45.0%
AAACCTCTCCTGGAGTAAGA+TGG + chr4.4:87793435-87793454 MS.gene33343:CDS 45.0%
AACCTCTCCTGGAGTAAGAT+GGG + chr4.4:87793436-87793455 MS.gene33343:CDS 45.0%
AAGGGTGAAGTCTGAACTTC+TGG + chr4.4:87794377-87794396 MS.gene33343:CDS 45.0%
ACATCATCCCATCTTACTCC+AGG - chr4.4:87793446-87793465 None:intergenic 45.0%
ACTAGTAGAAGACCTGGAAG+GGG + chr4.4:87792750-87792769 MS.gene33343:CDS 45.0%
ATTTCAGCCAATTCAGGGTC+AGG - chr4.4:87793395-87793414 None:intergenic 45.0%
CGGCTCTCAAAATTTGGAAG+AGG - chr4.4:87794691-87794710 None:intergenic 45.0%
CTACTAGCAGGACTAACTCA+GGG + chr4.4:87792877-87792896 MS.gene33343:CDS 45.0%
GATGCACCACCTTTCTTTAC+CGG - chr4.4:87792918-87792937 None:intergenic 45.0%
GATGTGTTAGAAACCTCTCC+TGG + chr4.4:87793425-87793444 MS.gene33343:CDS 45.0%
GCAAGAGATTACGCTCTTGA+AGG + chr4.4:87791463-87791482 MS.gene33343:CDS 45.0%
GCTTATCCCTGACTACTGTT+TGG + chr4.4:87793246-87793265 MS.gene33343:intron 45.0%
GGATCAACTCCGGTAAAGAA+AGG + chr4.4:87792906-87792925 MS.gene33343:CDS 45.0%
GTAAAGAAAGGTGGTGCATC+TGG + chr4.4:87792918-87792937 MS.gene33343:CDS 45.0%
GTAAGATGGGATGATGTTGC+AGG + chr4.4:87793449-87793468 MS.gene33343:CDS 45.0%
TACTAGCAGGACTAACTCAG+GGG + chr4.4:87792878-87792897 MS.gene33343:CDS 45.0%
TCAACTCCGGTAAAGAAAGG+TGG + chr4.4:87792909-87792928 MS.gene33343:CDS 45.0%
TCATGGCGTTCAATATCAGC+CGG - chr4.4:87795338-87795357 None:intergenic 45.0%
TGATTCCCTATGCAACGCTA+GGG + chr4.4:87794072-87794091 MS.gene33343:CDS 45.0%
TGTCGCGATGCTTCCTTAAA+TGG + chr4.4:87795182-87795201 MS.gene33343:CDS 45.0%
TTCCAGGAGGACCAAACATA+AGG - chr4.4:87793880-87793899 None:intergenic 45.0%
TTGATTCCCTATGCAACGCT+AGG + chr4.4:87794071-87794090 MS.gene33343:CDS 45.0%
! AGAGCCGTAAAGAGTTGATC+CGG + chr4.4:87794704-87794723 MS.gene33343:CDS 45.0%
! CAAGATAGTAAATGGGCTCG+AGG + chr4.4:87792801-87792820 MS.gene33343:CDS 45.0%
! CATCCATAAGGGAAGCACAA+CGG - chr4.4:87793507-87793526 None:intergenic 45.0%
! GTGCTGTTGCACAAATCAAC+AGG + chr4.4:87791518-87791537 MS.gene33343:CDS 45.0%
!! AGAAGTGTCTTTCCAGTTCC+AGG - chr4.4:87793896-87793915 None:intergenic 45.0%
!! GAACTTCTGGTTCAGGTTGA+TGG + chr4.4:87794390-87794409 MS.gene33343:CDS 45.0%
!! GAAGTCTGAACTTCTGGTTC+AGG + chr4.4:87794383-87794402 MS.gene33343:CDS 45.0%
AAGCCGTTGTGCTTCCCTTA+TGG + chr4.4:87793501-87793520 MS.gene33343:CDS 50.0%
AGTGCCTCATCTATGTCCCA+TGG - chr4.4:87794486-87794505 None:intergenic 50.0%
AGTGTCTTTCCAGTTCCAGG+AGG - chr4.4:87793893-87793912 None:intergenic 50.0%
ATACCCCCTAGCGTTGCATA+GGG - chr4.4:87794080-87794099 None:intergenic 50.0%
ATCCCATCTTACTCCAGGAG+AGG - chr4.4:87793441-87793460 None:intergenic 50.0%
ATGTTTGGTCCTCCTGGAAC+TGG + chr4.4:87793881-87793900 MS.gene33343:CDS 50.0%
ATTCCCTATGCAACGCTAGG+GGG + chr4.4:87794074-87794093 MS.gene33343:CDS 50.0%
CAATGAAGAACCACCACCAC+CGG - chr4.4:87791416-87791435 None:intergenic 50.0%
CCATACGTCGGGATCATCAA+AGG - chr4.4:87792712-87792731 None:intergenic 50.0%
CGTCGAACTGATGGCTATAG+TGG + chr4.4:87795140-87795159 MS.gene33343:CDS 50.0%
CTTCCCATGGGACATAGATG+AGG + chr4.4:87794479-87794498 MS.gene33343:CDS 50.0%
GAGAAAGTGAGCGAATGGTG+CGG + chr4.4:87793993-87794012 MS.gene33343:CDS 50.0%
GATTCCCTATGCAACGCTAG+GGG + chr4.4:87794073-87794092 MS.gene33343:CDS 50.0%
GCTACTAGCAGGACTAACTC+AGG + chr4.4:87792876-87792895 MS.gene33343:CDS 50.0%
GCTGCAGTGTGTCAGAAACT+TGG - chr4.4:87793212-87793231 None:intergenic 50.0%
GGAATGAGGCGAAAGATAGC+CGG + chr4.4:87795203-87795222 MS.gene33343:CDS 50.0%
GGCAGCTACTAACTTCCCAT+GGG + chr4.4:87794467-87794486 MS.gene33343:CDS 50.0%
GTAGAAATTGGAGGAGACGG+AGG - chr4.4:87792633-87792652 None:intergenic 50.0%
GTCCTTATGTTTGGTCCTCC+TGG + chr4.4:87793875-87793894 MS.gene33343:CDS 50.0%
GTGCCTCATCTATGTCCCAT+GGG - chr4.4:87794485-87794504 None:intergenic 50.0%
TGGCAGCTACTAACTTCCCA+TGG + chr4.4:87794466-87794485 MS.gene33343:CDS 50.0%
! CCTTTGATGATCCCGACGTA+TGG + chr4.4:87792709-87792728 MS.gene33343:CDS 50.0%
! GGGACATAGATGAGGCACTA+AGG + chr4.4:87794487-87794506 MS.gene33343:CDS 50.0%
! GGTCCAACGAAGTGTTTCTC+CGG + chr4.4:87795316-87795335 MS.gene33343:CDS 50.0%
! TTGATGATCCCGACGTATGG+AGG + chr4.4:87792712-87792731 MS.gene33343:CDS 50.0%
ACAACAAGTACCACTGGCCG+TGG + chr4.4:87792837-87792856 MS.gene33343:CDS 55.0%
ACGGAGGACGTCTTCCAATC+GGG - chr4.4:87792617-87792636 None:intergenic 55.0%
ACTAGGTGGCCTCCATACGT+CGG - chr4.4:87792724-87792743 None:intergenic 55.0%
AGTAGAAGACCTGGAAGGGG+TGG + chr4.4:87792753-87792772 MS.gene33343:CDS 55.0%
CAGCCGGAGAAACACTTCGT+TGG - chr4.4:87795322-87795341 None:intergenic 55.0%
CATACCCCCTAGCGTTGCAT+AGG - chr4.4:87794081-87794100 None:intergenic 55.0%
CGAAGGTCCTGACCCTGAAT+TGG + chr4.4:87793385-87793404 MS.gene33343:CDS 55.0%
GAAGTGGCTCGTCGAACTGA+TGG + chr4.4:87795131-87795150 MS.gene33343:CDS 55.0%
GACGGAGGACGTCTTCCAAT+CGG - chr4.4:87792618-87792637 None:intergenic 55.0%
GCACCAAAGGGAATGCACCT+AGG + chr4.4:87792061-87792080 MS.gene33343:intron 55.0%
GCGTGGAGAAAGTGAGCGAA+TGG + chr4.4:87793988-87794007 MS.gene33343:CDS 55.0%
! GGTGGTGGTTCTTCATTGGC+AGG + chr4.4:87791418-87791437 MS.gene33343:CDS 55.0%
!! CGGTGGTGGTGGTTCTTCAT+TGG + chr4.4:87791414-87791433 MS.gene33343:CDS 55.0%
ACCTGGAAGGGGTGGTCAAG+TGG + chr4.4:87792761-87792780 MS.gene33343:CDS 60.0%
AGGACTAACTCAGGGGCTCG+AGG + chr4.4:87792885-87792904 MS.gene33343:CDS 60.0%
AGGGGCTCGAGGATCAACTC+CGG + chr4.4:87792896-87792915 MS.gene33343:CDS 60.0%
CCTGGAAGGGGTGGTCAAGT+GGG + chr4.4:87792762-87792781 MS.gene33343:CDS 60.0%
CTAGGTGGCCTCCATACGTC+GGG - chr4.4:87792723-87792742 None:intergenic 60.0%
GGGGTGGTCAAGTGGGTACT+CGG + chr4.4:87792769-87792788 MS.gene33343:CDS 60.0%
!! AGGCTGGTGGTGCTACTAGC+AGG + chr4.4:87792865-87792884 MS.gene33343:CDS 60.0%
!! GGAAGCATCGCGACAGACGT+TGG - chr4.4:87795177-87795196 None:intergenic 60.0%
CACCACCAGCCTTTGCGCCA+CGG - chr4.4:87792857-87792876 None:intergenic 65.0%
CCCACTTGACCACCCCTTCC+AGG - chr4.4:87792765-87792784 None:intergenic 65.0%
TACCACTGGCCGTGGCGCAA+AGG + chr4.4:87792845-87792864 MS.gene33343:CDS 65.0%
ACTGGCCGTGGCGCAAAGGC+TGG + chr4.4:87792849-87792868 MS.gene33343:CDS 70.0%
AGCCTTTGCGCCACGGCCAG+TGG - chr4.4:87792850-87792869 None:intergenic 70.0%
GGCCGTGGCGCAAAGGCTGG+TGG + chr4.4:87792852-87792871 MS.gene33343:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 87791409 87795388 87791409 ID=MS.gene33343
chr4.4 mRNA 87791409 87795388 87791409 ID=MS.gene33343.t1;Parent=MS.gene33343
chr4.4 exon 87791409 87791539 87791409 ID=MS.gene33343.t1.exon1;Parent=MS.gene33343.t1
chr4.4 CDS 87791409 87791539 87791409 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
chr4.4 exon 87792491 87792965 87792491 ID=MS.gene33343.t1.exon2;Parent=MS.gene33343.t1
chr4.4 CDS 87792491 87792965 87792491 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
chr4.4 exon 87793344 87793541 87793344 ID=MS.gene33343.t1.exon3;Parent=MS.gene33343.t1
chr4.4 CDS 87793344 87793541 87793344 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
chr4.4 exon 87793851 87794095 87793851 ID=MS.gene33343.t1.exon4;Parent=MS.gene33343.t1
chr4.4 CDS 87793851 87794095 87793851 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
chr4.4 exon 87794350 87794508 87794350 ID=MS.gene33343.t1.exon5;Parent=MS.gene33343.t1
chr4.4 CDS 87794350 87794508 87794350 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
chr4.4 exon 87794660 87794747 87794660 ID=MS.gene33343.t1.exon6;Parent=MS.gene33343.t1
chr4.4 CDS 87794660 87794747 87794660 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
chr4.4 exon 87795107 87795388 87795107 ID=MS.gene33343.t1.exon7;Parent=MS.gene33343.t1
chr4.4 CDS 87795107 87795388 87795107 ID=cds.MS.gene33343.t1;Parent=MS.gene33343.t1
Gene Sequence

>MS.gene33343

ATGGCCGGTGGTGGTGGTTCTTCATTGGCAGGTTTGCAAGATCATGTGAAGTTAGCAAGAGATTACGCTCTTGAAGGTCTCTATGATACTTCTATCATCTTCTTTGATGGTGCTGTTGCACAAATCAACAGGTTCTTTACTCTTCTTTTTTCCTTTTTATTCTAAAGTTTGTTCTTTTACTACATTATAAATAATGGGTTTTGATTATTTTTGTATTTTGAGTAATTTTTGACACTACCCATTAATTATTTTGATGTGTGTTTCCCATTTTCATTGTAAAGTTTGTTTTTTGTTTCATTATAAATAATGGGTTGAAATTGTTTTTGCATTTTGACATTACCCATTTAATTATTTTGATGTTTTTTATATGAAATTAGCATTGTAACATCAAAGAGGAAAAAATGATTCACAATTGACTTGATTCATGATTGAGATGTTAGAATTCTTTTTGTGTTGAATGATGACAGTAATTGAAGTTTTAAGTTGATGGATCTTTGGTTGTTTGATTATAATTGAAGTTTTCTTGATATGAATTAAGTGGAGTTGAGTTGAACAAAACTTAGATACATTTCGGATTTTCGTACTGTTCTTAACTTAAAATACAATTTTTGTGGTTATAACAAACTATGAGTAGTTAAGAACAATACGAAAAGCACCAAAGGGAATGCACCTAGGTTTTATCCTTTTAAGTATTGTGTTGTAGTTAGTTGGTTTGGTATTCTTTTAAGTAGTTGATGAGATGTTAGAACTTAGAACTATTTTTGTATTGAATTATAACAGTAGTTGATGGATCTTTCGACGTTTGATTATAGTTAGTAGCAGTTCTTGATATCAATCAATTGGAGTTTTTGTTTGGTTCTTAACTTAAAAAATACACCTTTTGTGGTTATAACACATTGAGAAAATTATGGATTTCAGGAAATCATGGGTAGTTAAGTTAAGAACCACACGAAAAGCACTTAAGGAAATGCATCTAAGTTTTATCGTTTTAACTGTTGTGTTGTAGTTAGTTGGGTTGGTTAATTGTACCCTAGATTTGTGTTGTAGTTAATTGAAGAAGTTTGAATCTTGTGTGATTTCAGGCATCTAAACAGTGTTGACGATCCTTTAATTCGTGCAAAATGGATGAATGTTAAGAAAGCTCTTTCGGAGGAAACTGAAGTTGTAAAGCAACTAGATGCGGATAAAAGGGCGTTTAAAGATAACCCGATTGGAAGACGTCCTCCGTCTCCTCCAATTTCTACGAAATCTTCGTTTGTTTTTCAGCCATTAGATGAGTATCCTACTTCATCCAATTCTTCCTTTGATGATCCCGACGTATGGAGGCCACCTAGTAGAGATACTAGTAGAAGACCTGGAAGGGGTGGTCAAGTGGGTACTCGGAAATCTAATCAAGATAGTAAATGGGCTCGAGGTGCTACGACAAAGACAACAAGTACCACTGGCCGTGGCGCAAAGGCTGGTGGTGCTACTAGCAGGACTAACTCAGGGGCTCGAGGATCAACTCCGGTAAAGAAAGGTGGTGCATCTGGAAAGTCTAGCAACACAGATGCAGTTGTAAGTTTCAATTTCTATGGAGCATTCTGCTGGACTACATTTTCTTTATCACATTTTGTTGTTACAAGAAGTTATTCCTACATATTATTTATTCGGTGGACTAAACAAAATATTAATTATGTGTATGATCCTACAAAACCATAATTGAATAAGTTCTTCTGAGCATTTTGCTTTTTTTATTTTTTGCTCTATTTATTTTACTTTCTGATCCAAAAAGAGTATAGAATGATGGTTTTGGCGTGTCCAAGTTTCTGACACACTGCAGCATCTCTGATTATAAGCTTATCCCTGACTACTGTTTGGGTAGTTTGAAAAAACATCAAACTTGCATTTGTTGTTTAGTCCTTATGGTTTTGAATGGTATTTGTACTTTTATAGAATGGTGATGGTGAAGATGGGAAGTCAAATAAGAGAATATACGAAGGTCCTGACCCTGAATTGGCTGAAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTAAGATGGGATGATGTTGCAGGTCTTACTGAAGCAAAAAGACTTTTAGAAGAAGCCGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGTAACCTTAGACAATTCTCACTCCAAATGTTCTCAGAAAAACCTGCTTGTCTGAAGTTTAGAATTCTGATAATTGTGGTTTATTTATGAGACTCTGTGTAATTGTTGTCATGATTGTTAGTTTTAATGTTTAGACCCTGATTGGCTTTTTGATGAACAAATCTTGCATATATTTACTTTGCAAATAAGACTGATTTATGAAATTATTATTGCGAATAGGCTCATGTTAATAGGTTTTTTTAACTGTTTCATTTCTAGGTCCATTCTATTAGACTTGTTCCGTTGAGCTCATTATTTCTGTTTTTTTCAGGGAATTAGAAGACCTTGGAAAGGTGTCCTTATGTTTGGTCCTCCTGGAACTGGAAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACAACTTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAAAGTGAGCGAATGGTGCGGTGCTTGTTTGATCTTGCAAGAGCTTATGCACCAAGTACAATTTTCATTGATGAAATTGATTCCCTATGCAACGCTAGGGGGTATGTCTACTTTTTCTCTTTTAGAATCGATCACACATGATAGTGTTTGAAACTCGTTTATACTTCTATTTCTCTAATCTTATTAAATCTGATTATATAGTCTGTCCTAGGTTGTATCCAGTTCATTAAGTAATATATATTTTATTTTTTCTTATCTTGACTTGTTGGTTTCACTCTGAATTTGTACTCTATTCGGATTCTGGAATTATGTCACAATTTGATTGAATTCACTAGAAGGGCTTCTATTTCATCAGGGCTTCTGGAGAGCATGAATCATCTAGAAGGGTGAAGTCTGAACTTCTGGTTCAGGTTGATGGTGTAAGCAACAGTGCAACAAATGAAGATGGTAGCCGGAAATTAGTAATGGTCTTGGCAGCTACTAACTTCCCATGGGACATAGATGAGGCACTAAGGTTTGTATTTGGTTTTGCTTATTCTTTTCTAAACTATTTATATTGCTGGAGATAAAAACCTTTGATTAGTTATCTGTGTCTGAGACATCTTTGAAACGACTAGTTTACAGTTCACATTTTCTGATCCATTTTCATATTTAATGTAATGCAGGAGAAGACTGGAAAAGAGAATATATATCCCTCTTCCAAATTTTGAGAGCCGTAAAGAGTTGATCCGGATAAATTTGAAGACTGTTGAGGCAAGTTGTTGTTTTTCATTACTGTCTTGGCTTATATAGGATTTTGAGTGTGACCCTTATAATTTTTGTTGTGTAAAGGTGTACCGAATTTCTACTATCAATATCAAATTATATTGCATTAAGTTTAAAGCTTTATTTTATTAGGATTTGGAGATTTGCATTACCAGTGAAACAAAAAATGACATTGAGCATTTAATAAGATAGTAATATTCTTTTGTGAATGTTTTTTTGTTGGAGTTGTTGCTTAGTTACTTAAGTTACCATAAGTGCAGTTTATTGAAAGTGGGGCAGATTCACTTATGCTAAAACAATAAAACTTGATTTTTATATTTATAACTGATCGTATCATCTTGTATCAGGTAGCCGCTGATGTCAACATAGATGAAGTGGCTCGTCGAACTGATGGCTATAGTGGAGATGATTTGACCAACGTCTGTCGCGATGCTTCCTTAAATGGAATGAGGCGAAAGATAGCCGGAAAGACTCGTGATGAAATTAAGAGTATGTCTAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCATTGGTAAAGGTCCAACGAAGTGTTTCTCCGGCTGATATTGAACGCCATGAGAAGTGGTTTCATGAATTTGGATCAGCATAA
Protein sequence

>MS.gene33343.t1

MAGGGGSSLAGLQDHVKLARDYALEGLYDTSIIFFDGAVAQINRHLNSVDDPLIRAKWMNVKKALSEETEVVKQLDADKRAFKDNPIGRRPPSPPISTKSSFVFQPLDEYPTSSNSSFDDPDVWRPPSRDTSRRPGRGGQVGTRKSNQDSKWARGATTKTTSTTGRGAKAGGATSRTNSGARGSTPVKKGGASGKSSNTDAVNGDGEDGKSNKRIYEGPDPELAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKLVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKDEISKDPVAMCDFEEALVKVQRSVSPADIERHEKWFHEFGSA