Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35471.t1 | XP_013460938.1 | 93.3 | 779 | 14 | 1 | 1 | 741 | 1 | 779 | 0.00E+00 | 1198 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35471.t1 | Q9FGW9 | 48.4 | 739 | 306 | 17 | 24 | 712 | 1 | 714 | 9.8e-106 | 386.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35471.t1 | A0A072UZK0 | 93.3 | 779 | 14 | 1 | 1 | 741 | 1 | 779 | 0.0e+00 | 1198.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052016 | MS.gene35471 | 0.807696 | 4.46E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene35471 | 0.807371 | 5.22E-50 | -1.69E-46 |
| MS.gene056285 | MS.gene35471 | 0.814015 | 1.91E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene35471 | 0.805076 | 1.59E-49 | -1.69E-46 |
| MS.gene060284 | MS.gene35471 | 0.809032 | 2.31E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35471 | MS.gene33304 | PPI |
| MS.gene91151 | MS.gene35471 | PPI |
| MS.gene072326 | MS.gene35471 | PPI |
| MS.gene35471 | MS.gene07159 | PPI |
| MS.gene20681 | MS.gene35471 | PPI |
| MS.gene35471 | MS.gene017915 | PPI |
| MS.gene35471 | MS.gene014137 | PPI |
| MS.gene060511 | MS.gene35471 | PPI |
| MS.gene35471 | MS.gene03006 | PPI |
| MS.gene35471 | MS.gene84724 | PPI |
| MS.gene35471 | MS.gene005653 | PPI |
| MS.gene35471 | MS.gene067307 | PPI |
| MS.gene88635 | MS.gene35471 | PPI |
| MS.gene35471 | MS.gene84835 | PPI |
| MS.gene35471 | MS.gene026156 | PPI |
| MS.gene20679 | MS.gene35471 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35471.t1 | MTR_3g075040 | 93.582 | 779 | 12 | 1 | 1 | 741 | 1 | 779 | 0.0 | 1479 |
| MS.gene35471.t1 | MTR_3g075040 | 92.147 | 624 | 11 | 1 | 1 | 586 | 1 | 624 | 0.0 | 1170 |
| MS.gene35471.t1 | MTR_0018s0090 | 43.610 | 759 | 296 | 18 | 76 | 741 | 32 | 751 | 6.21e-151 | 458 |
| MS.gene35471.t1 | MTR_0018s0090 | 38.400 | 625 | 253 | 17 | 76 | 606 | 32 | 618 | 1.55e-101 | 325 |
| MS.gene35471.t1 | MTR_2g091135 | 40.693 | 231 | 96 | 6 | 207 | 405 | 308 | 529 | 9.47e-41 | 159 |
| MS.gene35471.t1 | MTR_4g092880 | 37.387 | 222 | 101 | 4 | 94 | 311 | 66 | 253 | 2.04e-38 | 147 |
| MS.gene35471.t1 | MTR_4g092880 | 37.387 | 222 | 101 | 4 | 94 | 311 | 66 | 253 | 1.19e-37 | 148 |
| MS.gene35471.t1 | MTR_4g092900 | 36.066 | 244 | 105 | 6 | 79 | 311 | 51 | 254 | 1.11e-36 | 145 |
| MS.gene35471.t1 | MTR_2g091130 | 39.286 | 224 | 109 | 4 | 207 | 405 | 297 | 518 | 1.12e-36 | 147 |
| MS.gene35471.t1 | MTR_4g092900 | 36.066 | 244 | 105 | 6 | 79 | 311 | 51 | 254 | 1.13e-36 | 145 |
| MS.gene35471.t1 | MTR_2g091135 | 34.268 | 321 | 150 | 8 | 207 | 475 | 308 | 619 | 1.49e-36 | 146 |
| MS.gene35471.t1 | MTR_4g079650 | 38.605 | 215 | 97 | 5 | 206 | 391 | 655 | 863 | 3.93e-36 | 146 |
| MS.gene35471.t1 | MTR_2g018270 | 44.643 | 168 | 75 | 4 | 147 | 310 | 30 | 183 | 4.73e-35 | 140 |
| MS.gene35471.t1 | MTR_2g018270 | 45.349 | 172 | 81 | 6 | 556 | 721 | 335 | 499 | 1.30e-23 | 105 |
| MS.gene35471.t1 | MTR_4g079650 | 41.969 | 193 | 77 | 5 | 206 | 369 | 655 | 841 | 7.14e-35 | 143 |
| MS.gene35471.t1 | MTR_4g079650 | 41.969 | 193 | 77 | 5 | 206 | 369 | 655 | 841 | 8.31e-35 | 142 |
| MS.gene35471.t1 | MTR_8g070660 | 40.367 | 109 | 62 | 1 | 206 | 311 | 93 | 201 | 1.05e-20 | 93.2 |
| MS.gene35471.t1 | MTR_8g070660 | 42.157 | 102 | 56 | 1 | 206 | 304 | 93 | 194 | 1.15e-20 | 95.1 |
| MS.gene35471.t1 | MTR_6g033375 | 37.168 | 113 | 68 | 1 | 195 | 304 | 57 | 169 | 2.39e-18 | 87.4 |
| MS.gene35471.t1 | MTR_2g437920 | 39.362 | 94 | 54 | 1 | 221 | 311 | 146 | 239 | 1.08e-15 | 80.1 |
| MS.gene35471.t1 | MTR_5g069490 | 44.048 | 84 | 44 | 1 | 221 | 301 | 113 | 196 | 6.56e-15 | 77.4 |
| MS.gene35471.t1 | MTR_8g062330 | 38.462 | 91 | 53 | 2 | 212 | 301 | 345 | 433 | 7.07e-11 | 65.5 |
| MS.gene35471.t1 | MTR_3g115560 | 36.082 | 97 | 60 | 1 | 213 | 309 | 131 | 225 | 7.09e-11 | 66.2 |
| MS.gene35471.t1 | MTR_8g005100 | 41.270 | 63 | 35 | 1 | 225 | 287 | 97 | 157 | 8.60e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35471.t1 | AT5G63320 | 49.059 | 744 | 300 | 19 | 24 | 715 | 1 | 717 | 4.63e-155 | 478 |
| MS.gene35471.t1 | AT5G14270 | 43.875 | 702 | 289 | 19 | 89 | 741 | 44 | 689 | 1.51e-131 | 405 |
| MS.gene35471.t1 | AT5G14270 | 44.126 | 698 | 292 | 20 | 89 | 741 | 44 | 688 | 9.73e-131 | 404 |
| MS.gene35471.t1 | AT5G14270 | 44.126 | 698 | 292 | 20 | 89 | 741 | 44 | 688 | 9.73e-131 | 404 |
| MS.gene35471.t1 | AT3G27260 | 40.161 | 747 | 358 | 14 | 24 | 725 | 1 | 703 | 7.46e-123 | 387 |
| MS.gene35471.t1 | AT3G27260 | 40.428 | 747 | 365 | 15 | 24 | 725 | 1 | 712 | 2.63e-122 | 385 |
| MS.gene35471.t1 | AT3G01770 | 42.576 | 660 | 298 | 20 | 89 | 741 | 35 | 620 | 1.09e-115 | 362 |
| MS.gene35471.t1 | AT3G27260 | 40.671 | 686 | 323 | 13 | 85 | 725 | 8 | 654 | 2.54e-112 | 358 |
| MS.gene35471.t1 | AT5G63320 | 44.609 | 473 | 196 | 12 | 24 | 456 | 1 | 447 | 2.31e-110 | 343 |
| MS.gene35471.t1 | AT5G63320 | 44.609 | 473 | 196 | 12 | 24 | 456 | 1 | 447 | 2.31e-110 | 343 |
| MS.gene35471.t1 | AT3G27260 | 40.351 | 456 | 215 | 10 | 24 | 438 | 1 | 440 | 1.20e-82 | 278 |
| MS.gene35471.t1 | AT3G01770 | 37.177 | 503 | 245 | 15 | 89 | 586 | 35 | 471 | 2.59e-71 | 241 |
| MS.gene35471.t1 | AT1G73150 | 31.778 | 343 | 157 | 6 | 98 | 405 | 51 | 351 | 6.03e-40 | 154 |
| MS.gene35471.t1 | AT1G73150 | 30.978 | 368 | 170 | 7 | 73 | 405 | 33 | 351 | 8.40e-40 | 152 |
| MS.gene35471.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.71e-36 | 146 |
| MS.gene35471.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.71e-36 | 146 |
| MS.gene35471.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.71e-36 | 146 |
| MS.gene35471.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.71e-36 | 146 |
| MS.gene35471.t1 | AT5G46550 | 59.804 | 102 | 41 | 0 | 209 | 310 | 72 | 173 | 1.33e-33 | 135 |
| MS.gene35471.t1 | AT1G17790 | 37.915 | 211 | 96 | 3 | 98 | 308 | 59 | 234 | 4.47e-33 | 134 |
| MS.gene35471.t1 | AT5G10550 | 34.583 | 240 | 141 | 5 | 87 | 325 | 69 | 293 | 8.13e-31 | 128 |
| MS.gene35471.t1 | AT5G65630 | 33.333 | 246 | 126 | 4 | 94 | 325 | 67 | 288 | 4.15e-30 | 126 |
| MS.gene35471.t1 | AT2G34900 | 43.810 | 105 | 59 | 0 | 207 | 311 | 1 | 105 | 8.64e-24 | 102 |
| MS.gene35471.t1 | AT2G34900 | 44.340 | 106 | 59 | 0 | 206 | 311 | 110 | 215 | 2.16e-23 | 103 |
| MS.gene35471.t1 | AT3G52280 | 36.697 | 109 | 66 | 1 | 206 | 311 | 94 | 202 | 8.98e-17 | 83.2 |
| MS.gene35471.t1 | AT3G52280 | 36.697 | 109 | 66 | 1 | 206 | 311 | 111 | 219 | 1.60e-16 | 82.8 |
| MS.gene35471.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.05e-11 | 68.6 |
| MS.gene35471.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.05e-11 | 68.6 |
| MS.gene35471.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.05e-11 | 68.6 |
| MS.gene35471.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.09e-11 | 68.6 |
| MS.gene35471.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.09e-11 | 68.6 |
| MS.gene35471.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.31e-11 | 68.6 |
Find 181 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAGCTCCCTCTTTCTTT+TGG | 0.184231 | 3.4:-73639232 | None:intergenic |
| GCTCGACGGTAGAGAGTTTC+AGG | 0.216942 | 3.4:-73638569 | None:intergenic |
| GACCCACCATTTCCAGTTTC+GGG | 0.237877 | 3.4:-73638241 | None:intergenic |
| CATCAAACATCCAATGGATT+TGG | 0.249907 | 3.4:+73635804 | MS.gene35471:CDS |
| TTGTGATTGAGAATACTTTC+TGG | 0.256920 | 3.4:-73635119 | None:intergenic |
| AGTGGAGGATAATTTGAATT+AGG | 0.259823 | 3.4:-73637183 | None:intergenic |
| CTTAGTAAAGCCTTTGAAAA+AGG | 0.265049 | 3.4:+73635961 | MS.gene35471:CDS |
| ATTTGAAATCGAGGTTGATT+TGG | 0.278968 | 3.4:+73635401 | MS.gene35471:CDS |
| CGTCTGATGTCTCATCAATT+TGG | 0.281091 | 3.4:+73635721 | MS.gene35471:CDS |
| TCTACCGTCGAGCTTTATTA+AGG | 0.282672 | 3.4:+73638579 | MS.gene35471:CDS |
| GGACCCACCATTTCCAGTTT+CGG | 0.291714 | 3.4:-73638242 | None:intergenic |
| GTGCAGCTTCTTAATGAATC+AGG | 0.292897 | 3.4:+73636957 | MS.gene35471:intron |
| GTACAATCCTAACTGCTCTA+AGG | 0.297632 | 3.4:-73639516 | None:intergenic |
| TCGTCATGTGGTAGAGACTA+TGG | 0.304985 | 3.4:+73635201 | MS.gene35471:CDS |
| GTACACAATTTACCTTTAGA+AGG | 0.328869 | 3.4:-73637002 | None:intergenic |
| CTCGCCTCCTCTTTGAAACT+TGG | 0.343353 | 3.4:-73639443 | None:intergenic |
| CTTCTGCTTCAGCTTTCCTC+CGG | 0.345699 | 3.4:-73639197 | None:intergenic |
| TTTGAAATCGAGGTTGATTT+GGG | 0.355871 | 3.4:+73635402 | MS.gene35471:CDS |
| TCGGATGGGTTGGGTAGCTC+GGG | 0.359165 | 3.4:+73635229 | MS.gene35471:CDS |
| GTCAGAACCTCTTAGTTCTA+AGG | 0.365851 | 3.4:+73638063 | MS.gene35471:CDS |
| GTCGGATGGGTTGGGTAGCT+CGG | 0.369109 | 3.4:+73635228 | MS.gene35471:CDS |
| TGTTGTTAAATTGAACATTC+CGG | 0.371429 | 3.4:+73635768 | MS.gene35471:CDS |
| GATGATCATCAAAATGGATT+TGG | 0.375420 | 3.4:+73639470 | MS.gene35471:CDS |
| AGCCCAGATGATCATCAAAA+TGG | 0.376994 | 3.4:+73639464 | MS.gene35471:CDS |
| ATAATTCTTTCAGCAGGTTC+TGG | 0.379739 | 3.4:-73636132 | None:intergenic |
| CTCTTTCAAGAAATCAAGAA+TGG | 0.385835 | 3.4:-73636220 | None:intergenic |
| CTCTCTGATTCAATAGTATC+TGG | 0.389894 | 3.4:-73638425 | None:intergenic |
| TGGAGAGCCAACACAGTATA+CGG | 0.390467 | 3.4:+73635542 | MS.gene35471:CDS |
| TAGCTCGGGGAGGGTTGATA+TGG | 0.391164 | 3.4:+73635243 | MS.gene35471:CDS |
| TTTCCAGTTTCGGGATTACT+AGG | 0.393300 | 3.4:-73638232 | None:intergenic |
| TTTCTCTTGAGCTTTCAGTA+TGG | 0.398691 | 3.4:-73638618 | None:intergenic |
| GATCCTAGTAATCCCGAAAC+TGG | 0.398992 | 3.4:+73638229 | MS.gene35471:CDS |
| ATCAAACATCCAATGGATTT+GGG | 0.406454 | 3.4:+73635805 | MS.gene35471:CDS |
| GGAGAGAGAAGCAGCCCGGC+AGG | 0.409897 | 3.4:+73639251 | MS.gene35471:CDS |
| GATGTCTCATCAATTTGGTT+GGG | 0.409934 | 3.4:+73635726 | MS.gene35471:CDS |
| TTGAAAGGTAACGACGGATA+TGG | 0.411750 | 3.4:+73635316 | MS.gene35471:CDS |
| TGATGTCTCATCAATTTGGT+TGG | 0.423505 | 3.4:+73635725 | MS.gene35471:CDS |
| GCTTGACTTACGATCAAAAC+AGG | 0.424175 | 3.4:+73638203 | MS.gene35471:CDS |
| ATTACACTTTCTACATAAGT+AGG | 0.426240 | 3.4:-73636048 | None:intergenic |
| AGCAGCTCTAGTAGTGAATC+TGG | 0.427342 | 3.4:+73637255 | MS.gene35471:CDS |
| TGGGACCACTACGCCCTGGC+AGG | 0.429672 | 3.4:-73635597 | None:intergenic |
| TCAGATTCAAGTAGTTCATC+TGG | 0.431497 | 3.4:+73638016 | MS.gene35471:CDS |
| AAGAAATCAAGAATGGAATC+AGG | 0.433454 | 3.4:-73636213 | None:intergenic |
| TTCTGCTTCAGCTTTCCTCC+GGG | 0.433559 | 3.4:-73639196 | None:intergenic |
| ATGGGTGAGTCGGATGGGTT+GGG | 0.436222 | 3.4:+73635220 | MS.gene35471:CDS |
| TACTCCAAAGGTTATGCTAC+TGG | 0.436978 | 3.4:+73635163 | MS.gene35471:CDS |
| CAAAAGCTGCAGAAGAGGCC+CGG | 0.440120 | 3.4:+73639178 | MS.gene35471:CDS |
| TTGATGACATTGAAATAATC+CGG | 0.441287 | 3.4:-73635787 | None:intergenic |
| AAACCAAGTTGCTTCCTGTT+CGG | 0.441398 | 3.4:-73635295 | None:intergenic |
| ATGGGTTGGGTAGCTCGGGG+AGG | 0.441503 | 3.4:+73635233 | MS.gene35471:CDS |
| TTGTATAGATTCAACTAACC+TGG | 0.444753 | 3.4:+73638370 | MS.gene35471:intron |
| GTATTCTCAATCACAAGTTA+TGG | 0.445787 | 3.4:+73635126 | MS.gene35471:CDS |
| AGTATGAATTCGAACATTGT+TGG | 0.446088 | 3.4:+73635463 | MS.gene35471:CDS |
| GACAATGAGTATAGTTGAAA+CGG | 0.448517 | 3.4:-73635352 | None:intergenic |
| TATTCTCAATCACAAGTTAT+GGG | 0.451420 | 3.4:+73635127 | MS.gene35471:CDS |
| TTCAACTAACCTGGGTATCC+AGG | 0.452896 | 3.4:+73638379 | MS.gene35471:CDS |
| TATGGGTGAGTCGGATGGGT+TGG | 0.456554 | 3.4:+73635219 | MS.gene35471:CDS |
| CTGATTCCTATGCACCGAAC+AGG | 0.458884 | 3.4:+73635281 | MS.gene35471:CDS |
| TCTGCAAACTCTGGTCAGCC+TGG | 0.461911 | 3.4:-73638397 | None:intergenic |
| AGCTGGAGAGAGAAGCAGCC+CGG | 0.464666 | 3.4:+73639247 | MS.gene35471:CDS |
| TCAAGAGAAAACCCTTGAAA+AGG | 0.469166 | 3.4:+73638631 | MS.gene35471:CDS |
| AAAACCAGTAGCATAACCTT+TGG | 0.469271 | 3.4:-73635167 | None:intergenic |
| TTCAATTTAACAACATCGAC+TGG | 0.477317 | 3.4:-73635760 | None:intergenic |
| GATCATCAAAATGGATTTGG+TGG | 0.480844 | 3.4:+73639473 | MS.gene35471:CDS |
| GAATCAGAGAGCCACCTAGA+TGG | 0.481644 | 3.4:+73638437 | MS.gene35471:CDS |
| TGGGTTGGGTAGCTCGGGGA+GGG | 0.484405 | 3.4:+73635234 | MS.gene35471:CDS |
| TTGCTTCCTGTTCGGTGCAT+AGG | 0.484773 | 3.4:-73635287 | None:intergenic |
| GGGACAGAAAAGGCCTCAGC+TGG | 0.486185 | 3.4:+73635522 | MS.gene35471:CDS |
| CCTTCTTCTACATCTTTCGA+TGG | 0.487286 | 3.4:-73639593 | None:intergenic |
| GGAAATCCCTTAGAGCAGTT+AGG | 0.490294 | 3.4:+73639509 | MS.gene35471:CDS |
| GGCTTGGTAAAAGTGTCGTT+TGG | 0.491438 | 3.4:-73636111 | None:intergenic |
| TCAGTCATAATTCTTTCAGC+AGG | 0.491461 | 3.4:-73636138 | None:intergenic |
| CCAAATGCCAGGCAATGAAC+TGG | 0.491464 | 3.4:+73637122 | MS.gene35471:intron |
| AGTAATCCCGAAACTGGAAA+TGG | 0.494331 | 3.4:+73638235 | MS.gene35471:CDS |
| AGAGGCAAAAGCTGCAGAAG+AGG | 0.496737 | 3.4:+73639173 | MS.gene35471:CDS |
| CGGATGGGTTGGGTAGCTCG+GGG | 0.497298 | 3.4:+73635230 | MS.gene35471:CDS |
| ATTGTCTAAAATGTCGGCTA+TGG | 0.498102 | 3.4:+73635369 | MS.gene35471:CDS |
| TACAATCCTAACTGCTCTAA+GGG | 0.501166 | 3.4:-73639515 | None:intergenic |
| AGGAAGCAACTTGGTTTGAA+AGG | 0.507274 | 3.4:+73635301 | MS.gene35471:CDS |
| CCAATCACCTTAGAACTAAG+AGG | 0.507874 | 3.4:-73638070 | None:intergenic |
| GCCAGGCAATGAACTGGTTG+AGG | 0.509028 | 3.4:+73637128 | MS.gene35471:intron |
| GCAGAAATTGAGTCAACAGT+TGG | 0.514082 | 3.4:+73636170 | MS.gene35471:CDS |
| GGTAAGAAAAGACCCCTGCC+AGG | 0.515915 | 3.4:+73635583 | MS.gene35471:CDS |
| TATCTCCGTCGAGTGACATA+AGG | 0.519054 | 3.4:+73635488 | MS.gene35471:CDS |
| CAATGTCATCAAACATCCAA+TGG | 0.519130 | 3.4:+73635798 | MS.gene35471:CDS |
| ATTTGGTGGGATCAAGCTGC+AGG | 0.519402 | 3.4:+73639487 | MS.gene35471:CDS |
| GAGGAGGACGTGGACATTGT+TGG | 0.519589 | 3.4:+73637147 | MS.gene35471:CDS |
| CAACAGTTGGAGGATATGCT+TGG | 0.520529 | 3.4:+73636183 | MS.gene35471:CDS |
| TCAGTATGGTGTCAGCAAAC+CGG | 0.521023 | 3.4:-73638604 | None:intergenic |
| TCATCCATGCAACCTTCTAA+AGG | 0.522115 | 3.4:+73636990 | MS.gene35471:CDS |
| GAAGGTTGATGACGAGGATG+AGG | 0.522882 | 3.4:+73639541 | MS.gene35471:CDS |
| TCTTTCAGCAGGTTCTGGCT+TGG | 0.525862 | 3.4:-73636127 | None:intergenic |
| GGGAGGGTGTTGCGTCTAAG+AGG | 0.526449 | 3.4:+73638537 | MS.gene35471:CDS |
| GTCGAGCTTTATTAAGGAGC+CGG | 0.526937 | 3.4:+73638585 | MS.gene35471:CDS |
| GTGAAGAGTAGGATAACATC+TGG | 0.526957 | 3.4:+73635832 | MS.gene35471:CDS |
| GACATAAGGAGCTGCAGTGT+GGG | 0.528436 | 3.4:+73635502 | MS.gene35471:CDS |
| GGTTGATGACGAGGATGAGG+AGG | 0.528529 | 3.4:+73639544 | MS.gene35471:CDS |
| CTGGCTTAGTCTGCAAACTC+TGG | 0.529168 | 3.4:-73638406 | None:intergenic |
| TGCAGCTTCTTAATGAATCA+GGG | 0.529324 | 3.4:+73636958 | MS.gene35471:intron |
| ATACTCATTGTCTAAAATGT+CGG | 0.531531 | 3.4:+73635363 | MS.gene35471:CDS |
| GGGACCACTACGCCCTGGCA+GGG | 0.531672 | 3.4:-73635596 | None:intergenic |
| CTATGAATTGCAGGAAAATG+TGG | 0.532385 | 3.4:+73638174 | MS.gene35471:intron |
| CACATCATCAGCAAAATCCA+TGG | 0.532779 | 3.4:-73635869 | None:intergenic |
| AACGTGACCCTGAAAAGCTT+AGG | 0.534483 | 3.4:+73638958 | MS.gene35471:CDS |
| TTTACCTTTAGAAGGTTGCA+TGG | 0.540896 | 3.4:-73636994 | None:intergenic |
| AGACTATGGGTGAGTCGGAT+GGG | 0.541351 | 3.4:+73635215 | MS.gene35471:CDS |
| CCATCGAAAGATGTAGAAGA+AGG | 0.542455 | 3.4:+73639593 | MS.gene35471:CDS |
| AAAGAGCAAAGTCGCATCGC+AGG | 0.542643 | 3.4:+73636237 | MS.gene35471:CDS |
| ATGCTGTGCACATCATTGCC+AGG | 0.543365 | 3.4:-73635928 | None:intergenic |
| GAGACTATGGGTGAGTCGGA+TGG | 0.543412 | 3.4:+73635214 | MS.gene35471:CDS |
| GGACCACTACGCCCTGGCAG+GGG | 0.544331 | 3.4:-73635595 | None:intergenic |
| AGAGAAAGAATTTGAAATCG+AGG | 0.545941 | 3.4:+73635392 | MS.gene35471:CDS |
| AGCCAAAAGAAAGAGGGAGC+TGG | 0.546575 | 3.4:+73639230 | MS.gene35471:CDS |
| GCTGCAGTGTGGGACAGAAA+AGG | 0.548653 | 3.4:+73635512 | MS.gene35471:CDS |
| GCACCGAACAGGAAGCAACT+TGG | 0.552234 | 3.4:+73635292 | MS.gene35471:CDS |
| CAGCTGAAGCCAAAAGAAAG+AGG | 0.552563 | 3.4:+73639223 | MS.gene35471:CDS |
| CTTGAGAGGAGGCAGAAGGA+AGG | 0.553387 | 3.4:+73638996 | MS.gene35471:CDS |
| TGATATGGAGCCGACTGCAT+CGG | 0.553491 | 3.4:+73635258 | MS.gene35471:CDS |
| GAGCAAAGTCGCATCGCAGG+AGG | 0.555548 | 3.4:+73636240 | MS.gene35471:CDS |
| AACGAACGATGATGAAATTG+AGG | 0.559453 | 3.4:+73636266 | MS.gene35471:CDS |
| CGTCATGTGGTAGAGACTAT+GGG | 0.559524 | 3.4:+73635202 | MS.gene35471:CDS |
| TGATGTGCACAGCATAGCAT+TGG | 0.560382 | 3.4:+73635936 | MS.gene35471:CDS |
| TGATGACGAGGATGAGGAGG+AGG | 0.560459 | 3.4:+73639547 | MS.gene35471:CDS |
| GCAAAATCTATGGGAACAGT+TGG | 0.560604 | 3.4:-73635082 | None:intergenic |
| AATGTAGCATATGAAGCCAT+TGG | 0.567901 | 3.4:-73635670 | None:intergenic |
| TTCACAGTACCCAAATCCAT+TGG | 0.567942 | 3.4:-73635814 | None:intergenic |
| TGGTAAATATTCAAATCCCA+TGG | 0.569156 | 3.4:+73635852 | MS.gene35471:CDS |
| TGTTCCTGAGTTTCGTCATG+TGG | 0.571126 | 3.4:+73635189 | MS.gene35471:CDS |
| CTGTGTTGGCTCTCCAGCTG+AGG | 0.572376 | 3.4:-73635535 | None:intergenic |
| TGTATAGATTCAACTAACCT+GGG | 0.573975 | 3.4:+73638371 | MS.gene35471:intron |
| TCTGGTCAGCCTGGATACCC+AGG | 0.577514 | 3.4:-73638388 | None:intergenic |
| AGACCCCTGCCAGGGCGTAG+TGG | 0.578757 | 3.4:+73635592 | MS.gene35471:CDS |
| ACAGCTCTCGTTGATTTCAA+CGG | 0.578801 | 3.4:-73639369 | None:intergenic |
| ATTTGGGTACTGTGAAGAGT+AGG | 0.581358 | 3.4:+73635821 | MS.gene35471:CDS |
| GTCTTGGGACCACTACGCCC+TGG | 0.583209 | 3.4:-73635601 | None:intergenic |
| TGAACTGGTTGAGGAGGACG+TGG | 0.585832 | 3.4:+73637137 | MS.gene35471:CDS |
| GGGACACGATGATCAATGAC+AGG | 0.598469 | 3.4:-73636009 | None:intergenic |
| ATGCTTGCCGTATACTGTGT+TGG | 0.598736 | 3.4:-73635549 | None:intergenic |
| ATCATCAAAATGGATTTGGT+GGG | 0.599268 | 3.4:+73639474 | MS.gene35471:CDS |
| TACACCAAGTTTCAAAGAGG+AGG | 0.599655 | 3.4:+73639439 | MS.gene35471:CDS |
| GCAGTTAGGATTGTACATGA+AGG | 0.601776 | 3.4:+73639523 | MS.gene35471:CDS |
| GAAATTGAGTCAACAGTTGG+AGG | 0.604172 | 3.4:+73636173 | MS.gene35471:CDS |
| GGAGGATAATTTGAATTAGG+CGG | 0.606500 | 3.4:-73637180 | None:intergenic |
| AGAACTTGAGAGGAGGCAGA+AGG | 0.608648 | 3.4:+73638992 | MS.gene35471:CDS |
| AGCAAAGTCGCATCGCAGGA+GGG | 0.609818 | 3.4:+73636241 | MS.gene35471:CDS |
| GAAAGCTCGATTGCAAGCAG+AGG | 0.612062 | 3.4:+73639155 | MS.gene35471:CDS |
| TAGGAATCAGCCGATGCAGT+CGG | 0.613535 | 3.4:-73635268 | None:intergenic |
| TCTACCACATGACGAAACTC+AGG | 0.614639 | 3.4:-73635193 | None:intergenic |
| CTTGACTTACGATCAAAACA+GGG | 0.615865 | 3.4:+73638204 | MS.gene35471:CDS |
| ACACAGTATACGGCAAGCAT+CGG | 0.617021 | 3.4:+73635552 | MS.gene35471:CDS |
| AGCTGAAGCCAAAAGAAAGA+GGG | 0.617838 | 3.4:+73639224 | MS.gene35471:CDS |
| GATGGCTCTGCAGCACTCTG+AGG | 0.618982 | 3.4:-73639575 | None:intergenic |
| CGGCAAGCATCGGTGCCACA+TGG | 0.620715 | 3.4:+73635562 | MS.gene35471:CDS |
| TTGAGCGAGAAGAACTTGAG+AGG | 0.622715 | 3.4:+73638982 | MS.gene35471:CDS |
| ACATCATCAGCAAAATCCAT+GGG | 0.623227 | 3.4:-73635868 | None:intergenic |
| ATTCTCAATCACAAGTTATG+GGG | 0.631785 | 3.4:+73635128 | MS.gene35471:CDS |
| AGGCAATGAACTGGTTGAGG+AGG | 0.632610 | 3.4:+73637131 | MS.gene35471:intron |
| AAATCAAGAAAATACTCCAA+AGG | 0.633873 | 3.4:+73635151 | MS.gene35471:CDS |
| AGCGAGAAGAACTTGAGAGG+AGG | 0.636218 | 3.4:+73638985 | MS.gene35471:CDS |
| TTTGGTGGGATCAAGCTGCA+GGG | 0.639434 | 3.4:+73639488 | MS.gene35471:CDS |
| TTGCAGGAAAATGTGGGACC+TGG | 0.639784 | 3.4:+73638181 | MS.gene35471:intron |
| GTAAGAAAAGACCCCTGCCA+GGG | 0.640414 | 3.4:+73635584 | MS.gene35471:CDS |
| TATGAATTGCAGGAAAATGT+GGG | 0.641252 | 3.4:+73638175 | MS.gene35471:intron |
| TTTCAAGCTTACCATCTAGG+TGG | 0.643818 | 3.4:-73638448 | None:intergenic |
| GAGGACGTGGACATTGTTGG+TGG | 0.643908 | 3.4:+73637150 | MS.gene35471:CDS |
| TGAAAGAATTATGACTGACA+TGG | 0.647393 | 3.4:+73636143 | MS.gene35471:CDS |
| AAATACACCAAGTTTCAAAG+AGG | 0.661472 | 3.4:+73639436 | MS.gene35471:CDS |
| GCAATGACTTATAATCCACC+TGG | 0.664500 | 3.4:+73635910 | MS.gene35471:CDS |
| CAAATTGATGAGACATCAGA+CGG | 0.667504 | 3.4:-73635720 | None:intergenic |
| TGACATAAGGAGCTGCAGTG+TGG | 0.675265 | 3.4:+73635501 | MS.gene35471:CDS |
| GGTAGAGACTATGGGTGAGT+CGG | 0.677195 | 3.4:+73635210 | MS.gene35471:CDS |
| CAGCTCCTTATGTCACTCGA+CGG | 0.678805 | 3.4:-73635493 | None:intergenic |
| GAATCTGGCTCATCATCCAG+TGG | 0.679363 | 3.4:+73637270 | MS.gene35471:CDS |
| TGACTTACGATCAAAACAGG+GGG | 0.682999 | 3.4:+73638206 | MS.gene35471:CDS |
| CTTGGTTTGAAAGGTAACGA+CGG | 0.683657 | 3.4:+73635310 | MS.gene35471:CDS |
| GGCTCCTTAATAAAGCTCGA+CGG | 0.684386 | 3.4:-73638583 | None:intergenic |
| AAGCTGCAGAAGAGGCCCGG+AGG | 0.701414 | 3.4:+73639181 | MS.gene35471:CDS |
| TTGACTTACGATCAAAACAG+GGG | 0.729127 | 3.4:+73638205 | MS.gene35471:CDS |
| GTACATGAAGGTTGATGACG+AGG | 0.732133 | 3.4:+73639535 | MS.gene35471:CDS |
| CTGTGCACATCATTGCCAGG+TGG | 0.741938 | 3.4:-73635925 | None:intergenic |
| GACTTACGATCAAAACAGGG+GGG | 0.756673 | 3.4:+73638207 | MS.gene35471:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGTAAAATAGTTTA+AGG | - | chr3.4:73637450-73637469 | None:intergenic | 10.0% |
| !!! | ATTCATTTATGTAATAATTT+TGG | + | chr3.4:73637501-73637520 | MS.gene35471:intron | 10.0% |
| !!! | ATTTTTTTTTTCTTTCTAAA+TGG | + | chr3.4:73639052-73639071 | MS.gene35471:intron | 10.0% |
| !! | AGAAAGAAAAAAAAAATACA+AGG | - | chr3.4:73639049-73639068 | None:intergenic | 15.0% |
| !! | ATTGTTAAAATTTGACATTT+AGG | + | chr3.4:73636625-73636644 | MS.gene35471:intron | 15.0% |
| !!! | CATTTAAAAATTTTATTGCA+TGG | + | chr3.4:73636801-73636820 | MS.gene35471:intron | 15.0% |
| !!! | TTATACCTAAAATATTGATT+AGG | - | chr3.4:73637482-73637501 | None:intergenic | 15.0% |
| !! | ACATCCAAAAGAAATAAAAA+TGG | - | chr3.4:73637380-73637399 | None:intergenic | 20.0% |
| !! | TGAATTTATAAGAGAAATAC+TGG | - | chr3.4:73637868-73637887 | None:intergenic | 20.0% |
| !! | TTCATATAAAACTTGCATAA+TGG | - | chr3.4:73638900-73638919 | None:intergenic | 20.0% |
| !! | TTGTTGTAATTGTTGAAATT+TGG | + | chr3.4:73636778-73636797 | MS.gene35471:intron | 20.0% |
| !!! | AACTCCATTTTTATTTCTTT+TGG | + | chr3.4:73637373-73637392 | MS.gene35471:intron | 20.0% |
| !!! | ATTTTTATTTCTTTTGGATG+TGG | + | chr3.4:73637379-73637398 | MS.gene35471:intron | 20.0% |
| !!! | CTATTTTACTTTTTTTTTCC+CGG | + | chr3.4:73637454-73637473 | MS.gene35471:intron | 20.0% |
| !!! | GTTTTATCATAAACCATATT+TGG | - | chr3.4:73636700-73636719 | None:intergenic | 20.0% |
| !!! | TGGTTAATTTTAATGCATTA+TGG | + | chr3.4:73637807-73637826 | MS.gene35471:intron | 20.0% |
| ! | AAAAATATACAAGTTCCTAC+TGG | - | chr3.4:73637631-73637650 | None:intergenic | 25.0% |
| ! | AAATCAAGAAAATACTCCAA+AGG | + | chr3.4:73635151-73635170 | MS.gene35471:CDS | 25.0% |
| ! | AAGAAACTATAATATGCACA+TGG | - | chr3.4:73638290-73638309 | None:intergenic | 25.0% |
| ! | AAGAAATAAAAATGGAGTTC+TGG | - | chr3.4:73637372-73637391 | None:intergenic | 25.0% |
| ! | AGAAATAAAAATGGAGTTCT+GGG | - | chr3.4:73637371-73637390 | None:intergenic | 25.0% |
| ! | ATGTGCATATTATAGTTTCT+TGG | + | chr3.4:73638289-73638308 | MS.gene35471:intron | 25.0% |
| ! | ATTACACTTTCTACATAAGT+AGG | - | chr3.4:73636051-73636070 | None:intergenic | 25.0% |
| ! | ATTTGACATTTAGGAACTAT+AGG | + | chr3.4:73636634-73636653 | MS.gene35471:intron | 25.0% |
| ! | CAGGAAGCTTAATTTATATA+TGG | - | chr3.4:73639309-73639328 | None:intergenic | 25.0% |
| ! | CATATATAAATTAAGCTTCC+TGG | + | chr3.4:73639307-73639326 | MS.gene35471:intron | 25.0% |
| ! | CTGCATAAAATGATAGTTTA+CGG | - | chr3.4:73636877-73636896 | None:intergenic | 25.0% |
| ! | CTTGAAAATTCATAGAGATT+TGG | - | chr3.4:73637426-73637445 | None:intergenic | 25.0% |
| ! | TATTCTCAATCACAAGTTAT+GGG | + | chr3.4:73635127-73635146 | MS.gene35471:CDS | 25.0% |
| ! | TATTGCTAAAGTAGTAAATC+TGG | + | chr3.4:73638830-73638849 | MS.gene35471:intron | 25.0% |
| ! | TGTTGTTAAATTGAACATTC+CGG | + | chr3.4:73635768-73635787 | MS.gene35471:CDS | 25.0% |
| !! | AAATTTAGAGTTTAATGAGC+TGG | + | chr3.4:73636672-73636691 | MS.gene35471:intron | 25.0% |
| !! | AAGACAAAAAAAAGTATGTC+TGG | + | chr3.4:73635619-73635638 | MS.gene35471:CDS | 25.0% |
| !! | ACTTCATGCTGTAATATTTT+AGG | + | chr3.4:73638515-73638534 | MS.gene35471:intron | 25.0% |
| !! | ATACTCATTGTCTAAAATGT+CGG | + | chr3.4:73635363-73635382 | MS.gene35471:CDS | 25.0% |
| !! | CTTCATGCTGTAATATTTTA+GGG | + | chr3.4:73638516-73638535 | MS.gene35471:intron | 25.0% |
| !! | TAATGAATTTTTCTGTATGC+TGG | + | chr3.4:73637954-73637973 | MS.gene35471:intron | 25.0% |
| !! | TTGATGACATTGAAATAATC+CGG | - | chr3.4:73635790-73635809 | None:intergenic | 25.0% |
| !!! | AGACATACTTTTTTTTGTCT+TGG | - | chr3.4:73635620-73635639 | None:intergenic | 25.0% |
| !!! | CGGTTTTTTAACAAAGAAAA+TGG | - | chr3.4:73638154-73638173 | None:intergenic | 25.0% |
| !!! | GACATACTTTTTTTTGTCTT+GGG | - | chr3.4:73635619-73635638 | None:intergenic | 25.0% |
| !!! | GCTAAATTGAAAGTATCATA+AGG | - | chr3.4:73636599-73636618 | None:intergenic | 25.0% |
| !!! | GTCATTTTCTTCTTTTTTGT+GGG | - | chr3.4:73636090-73636109 | None:intergenic | 25.0% |
| !!! | TCATTTTCTTCTTTTTTGTG+GGG | - | chr3.4:73636089-73636108 | None:intergenic | 25.0% |
| !!! | TGTCATTTTCTTCTTTTTTG+TGG | - | chr3.4:73636091-73636110 | None:intergenic | 25.0% |
| !!! | TTCATGCTGTAATATTTTAG+GGG | + | chr3.4:73638517-73638536 | MS.gene35471:intron | 25.0% |
| AAAATTGACACTGAAACATC+TGG | - | chr3.4:73637540-73637559 | None:intergenic | 30.0% | |
| AAATACACCAAGTTTCAAAG+AGG | + | chr3.4:73639436-73639455 | MS.gene35471:CDS | 30.0% | |
| AAGAAATCAAGAATGGAATC+AGG | - | chr3.4:73636216-73636235 | None:intergenic | 30.0% | |
| AAGCTTACGTAATTTGAACA+GGG | - | chr3.4:73636319-73636338 | None:intergenic | 30.0% | |
| AATGAGCAAGAAAGCAATAA+AGG | - | chr3.4:73638341-73638360 | None:intergenic | 30.0% | |
| AGTATGAATTCGAACATTGT+TGG | + | chr3.4:73635463-73635482 | MS.gene35471:CDS | 30.0% | |
| AGTGGAGGATAATTTGAATT+AGG | - | chr3.4:73637186-73637205 | None:intergenic | 30.0% | |
| ATTCTCAATCACAAGTTATG+GGG | + | chr3.4:73635128-73635147 | MS.gene35471:CDS | 30.0% | |
| CAACTATCTCATTAACAAAG+CGG | + | chr3.4:73637587-73637606 | MS.gene35471:intron | 30.0% | |
| CAATAATAGAAATTCCCTAC+TGG | - | chr3.4:73638815-73638834 | None:intergenic | 30.0% | |
| CATTAAAATTGACAAGTGTC+TGG | - | chr3.4:73637939-73637958 | None:intergenic | 30.0% | |
| CTCTTTCAAGAAATCAAGAA+TGG | - | chr3.4:73636223-73636242 | None:intergenic | 30.0% | |
| GAACTATAGGAGAAACTATT+AGG | + | chr3.4:73636647-73636666 | MS.gene35471:intron | 30.0% | |
| GACAATGAGTATAGTTGAAA+CGG | - | chr3.4:73635355-73635374 | None:intergenic | 30.0% | |
| GTACACAATTTACCTTTAGA+AGG | - | chr3.4:73637005-73637024 | None:intergenic | 30.0% | |
| GTATTCTCAATCACAAGTTA+TGG | + | chr3.4:73635126-73635145 | MS.gene35471:CDS | 30.0% | |
| GTGTATACTCAATAAGTTGT+TGG | + | chr3.4:73637779-73637798 | MS.gene35471:intron | 30.0% | |
| TATGAATTGCAGGAAAATGT+GGG | + | chr3.4:73638175-73638194 | MS.gene35471:intron | 30.0% | |
| TGAAAGAATTATGACTGACA+TGG | + | chr3.4:73636143-73636162 | MS.gene35471:CDS | 30.0% | |
| TGGTAAATATTCAAATCCCA+TGG | + | chr3.4:73635852-73635871 | MS.gene35471:CDS | 30.0% | |
| TGTATAGATTCAACTAACCT+GGG | + | chr3.4:73638371-73638390 | MS.gene35471:intron | 30.0% | |
| TTCAATTTAACAACATCGAC+TGG | - | chr3.4:73635763-73635782 | None:intergenic | 30.0% | |
| TTGTATAGATTCAACTAACC+TGG | + | chr3.4:73638370-73638389 | MS.gene35471:intron | 30.0% | |
| TTGTGATTGAGAATACTTTC+TGG | - | chr3.4:73635122-73635141 | None:intergenic | 30.0% | |
| ! | AGAGAAAGAATTTGAAATCG+AGG | + | chr3.4:73635392-73635411 | MS.gene35471:CDS | 30.0% |
| ! | ATCAAACATCCAATGGATTT+GGG | + | chr3.4:73635805-73635824 | MS.gene35471:CDS | 30.0% |
| ! | ATCATCAAAATGGATTTGGT+GGG | + | chr3.4:73639474-73639493 | MS.gene35471:CDS | 30.0% |
| ! | ATTTGAAATCGAGGTTGATT+TGG | + | chr3.4:73635401-73635420 | MS.gene35471:CDS | 30.0% |
| ! | ATTTGTTGCAGTAATAGACT+AGG | + | chr3.4:73638692-73638711 | MS.gene35471:intron | 30.0% |
| ! | CGTAAACTATCATTTTATGC+AGG | + | chr3.4:73636875-73636894 | MS.gene35471:intron | 30.0% |
| ! | CTAAAATATTGATTAGGAGC+CGG | - | chr3.4:73637476-73637495 | None:intergenic | 30.0% |
| ! | CTTAGTAAAGCCTTTGAAAA+AGG | + | chr3.4:73635961-73635980 | MS.gene35471:CDS | 30.0% |
| ! | GATGATCATCAAAATGGATT+TGG | + | chr3.4:73639470-73639489 | MS.gene35471:CDS | 30.0% |
| ! | TAAAATATTGATTAGGAGCC+GGG | - | chr3.4:73637475-73637494 | None:intergenic | 30.0% |
| ! | TTTGAAATCGAGGTTGATTT+GGG | + | chr3.4:73635402-73635421 | MS.gene35471:CDS | 30.0% |
| ! | TTTTGTCCAGCAAAATCTAT+GGG | - | chr3.4:73635094-73635113 | None:intergenic | 30.0% |
| !! | AATCCATTTTGATGATCATC+TGG | - | chr3.4:73639470-73639489 | None:intergenic | 30.0% |
| !! | ATCCATTTTGATGATCATCT+GGG | - | chr3.4:73639469-73639488 | None:intergenic | 30.0% |
| !! | ATTTTCTTCTTTTTTGTGGG+GGG | - | chr3.4:73636087-73636106 | None:intergenic | 30.0% |
| !! | CATTTTCTTCTTTTTTGTGG+GGG | - | chr3.4:73636088-73636107 | None:intergenic | 30.0% |
| !! | TCAATAAGTTGTTGGTTTGT+TGG | + | chr3.4:73637787-73637806 | MS.gene35471:intron | 30.0% |
| !! | TCTACATAAGTAGGTTTTGA+AGG | - | chr3.4:73636042-73636061 | None:intergenic | 30.0% |
| !!! | ATTTTTCAAGCTTACCATCT+AGG | - | chr3.4:73638454-73638473 | None:intergenic | 30.0% |
| AAAAAACCGCTATGAATTGC+AGG | + | chr3.4:73638165-73638184 | MS.gene35471:intron | 35.0% | |
| AAAACCAGTAGCATAACCTT+TGG | - | chr3.4:73635170-73635189 | None:intergenic | 35.0% | |
| AACGAACGATGATGAAATTG+AGG | + | chr3.4:73636266-73636285 | MS.gene35471:CDS | 35.0% | |
| AATGGCAGAACTTTCATGAA+AGG | - | chr3.4:73638882-73638901 | None:intergenic | 35.0% | |
| AATGTAGCATATGAAGCCAT+TGG | - | chr3.4:73635673-73635692 | None:intergenic | 35.0% | |
| AATGTTGACACTTGTACCAT+AGG | - | chr3.4:73637069-73637088 | None:intergenic | 35.0% | |
| ACATCATCAGCAAAATCCAT+GGG | - | chr3.4:73635871-73635890 | None:intergenic | 35.0% | |
| ACTACTTGAATCTGAATCTG+TGG | - | chr3.4:73638011-73638030 | None:intergenic | 35.0% | |
| AGAAGACTATAAGCATATCC+TGG | - | chr3.4:73637332-73637351 | None:intergenic | 35.0% | |
| ATAATTCTTTCAGCAGGTTC+TGG | - | chr3.4:73636135-73636154 | None:intergenic | 35.0% | |
| ATCTCATTAACAAAGCGGTA+TGG | + | chr3.4:73637592-73637611 | MS.gene35471:intron | 35.0% | |
| ATGTTGACACTTGTACCATA+GGG | - | chr3.4:73637068-73637087 | None:intergenic | 35.0% | |
| CAAATTGATGAGACATCAGA+CGG | - | chr3.4:73635723-73635742 | None:intergenic | 35.0% | |
| CAATGTCATCAAACATCCAA+TGG | + | chr3.4:73635798-73635817 | MS.gene35471:CDS | 35.0% | |
| CCACTAGAAATCGAAAAAGA+TGG | + | chr3.4:73637201-73637220 | MS.gene35471:CDS | 35.0% | |
| CTATAAGCATATCCTGGAAT+CGG | - | chr3.4:73637326-73637345 | None:intergenic | 35.0% | |
| CTATGAATTGCAGGAAAATG+TGG | + | chr3.4:73638174-73638193 | MS.gene35471:intron | 35.0% | |
| CTCTCTGATTCAATAGTATC+TGG | - | chr3.4:73638428-73638447 | None:intergenic | 35.0% | |
| CTTGACTTACGATCAAAACA+GGG | + | chr3.4:73638204-73638223 | MS.gene35471:CDS | 35.0% | |
| GAAGCTTACGTAATTTGAAC+AGG | - | chr3.4:73636320-73636339 | None:intergenic | 35.0% | |
| GAGTGAGAGGAATATCATTA+AGG | - | chr3.4:73637568-73637587 | None:intergenic | 35.0% | |
| GATGTCTCATCAATTTGGTT+GGG | + | chr3.4:73635726-73635745 | MS.gene35471:CDS | 35.0% | |
| GGAGGATAATTTGAATTAGG+CGG | - | chr3.4:73637183-73637202 | None:intergenic | 35.0% | |
| TAAACACGCATATACAAGTG+AGG | - | chr3.4:73636850-73636869 | None:intergenic | 35.0% | |
| TAATGAGATAGTTGAGTGAG+AGG | - | chr3.4:73637581-73637600 | None:intergenic | 35.0% | |
| TAATGAGCTGGATCCAAATA+TGG | + | chr3.4:73636684-73636703 | MS.gene35471:intron | 35.0% | |
| TACAATCCTAACTGCTCTAA+GGG | - | chr3.4:73639518-73639537 | None:intergenic | 35.0% | |
| TACGAAAGCCCATAAAGTTT+GGG | - | chr3.4:73638266-73638285 | None:intergenic | 35.0% | |
| TCAAGAGAAAACCCTTGAAA+AGG | + | chr3.4:73638631-73638650 | MS.gene35471:CDS | 35.0% | |
| TCAGATTCAAGTAGTTCATC+TGG | + | chr3.4:73638016-73638035 | MS.gene35471:CDS | 35.0% | |
| TCAGTCATAATTCTTTCAGC+AGG | - | chr3.4:73636141-73636160 | None:intergenic | 35.0% | |
| TGATGTCTCATCAATTTGGT+TGG | + | chr3.4:73635725-73635744 | MS.gene35471:CDS | 35.0% | |
| TGCAGCTTCTTAATGAATCA+GGG | + | chr3.4:73636958-73636977 | MS.gene35471:intron | 35.0% | |
| TTACGAAAGCCCATAAAGTT+TGG | - | chr3.4:73638267-73638286 | None:intergenic | 35.0% | |
| TTATCTGACTGTTGCAATTG+TGG | + | chr3.4:73637983-73638002 | MS.gene35471:intron | 35.0% | |
| TTCAATTCCAACTTGATCTC+AGG | + | chr3.4:73638929-73638948 | MS.gene35471:intron | 35.0% | |
| TTGACTTACGATCAAAACAG+GGG | + | chr3.4:73638205-73638224 | MS.gene35471:CDS | 35.0% | |
| TTTCTCTTGAGCTTTCAGTA+TGG | - | chr3.4:73638621-73638640 | None:intergenic | 35.0% | |
| TTTCTTTCAGACATCACATC+TGG | + | chr3.4:73637730-73637749 | MS.gene35471:intron | 35.0% | |
| TTTGATATGTTTCCGATTCC+AGG | + | chr3.4:73637311-73637330 | MS.gene35471:intron | 35.0% | |
| ! | ATTGTCTAAAATGTCGGCTA+TGG | + | chr3.4:73635369-73635388 | MS.gene35471:CDS | 35.0% |
| ! | CATAGATTTTGCTGGACAAA+AGG | + | chr3.4:73635093-73635112 | MS.gene35471:CDS | 35.0% |
| ! | CATCAAACATCCAATGGATT+TGG | + | chr3.4:73635804-73635823 | MS.gene35471:CDS | 35.0% |
| ! | CATTTTCCTGCAATTCATAG+CGG | - | chr3.4:73638174-73638193 | None:intergenic | 35.0% |
| ! | CCCTTAACAAACCTTTTCAA+GGG | - | chr3.4:73638645-73638664 | None:intergenic | 35.0% |
| ! | CGGCTCCTAATCAATATTTT+AGG | + | chr3.4:73637474-73637493 | MS.gene35471:intron | 35.0% |
| ! | CTTTTGTCCAGCAAAATCTA+TGG | - | chr3.4:73635095-73635114 | None:intergenic | 35.0% |
| ! | GATCATCAAAATGGATTTGG+TGG | + | chr3.4:73639473-73639492 | MS.gene35471:CDS | 35.0% |
| ! | GCTTCTTGATGATTATTTGC+TGG | + | chr3.4:73636335-73636354 | MS.gene35471:intron | 35.0% |
| ! | GGCATTTGGAGTGAAAATAA+AGG | - | chr3.4:73637111-73637130 | None:intergenic | 35.0% |
| ! | GTAAAGCCTTTGAAAAAGGA+TGG | + | chr3.4:73635965-73635984 | MS.gene35471:CDS | 35.0% |
| ! | TTATTTTCACTCCAAATGCC+AGG | + | chr3.4:73637111-73637130 | MS.gene35471:intron | 35.0% |
| ! | TTTACCTTTAGAAGGTTGCA+TGG | - | chr3.4:73636997-73637016 | None:intergenic | 35.0% |
| ! | TTTTCATCCTGAGATCAAGT+TGG | - | chr3.4:73638939-73638958 | None:intergenic | 35.0% |
| !! | ACCCTTGAAAAGGTTTGTTA+AGG | + | chr3.4:73638641-73638660 | MS.gene35471:intron | 35.0% |
| !! | ATGCTGTAATATTTTAGGGG+AGG | + | chr3.4:73638520-73638539 | MS.gene35471:intron | 35.0% |
| !! | CCCTTGAAAAGGTTTGTTAA+GGG | + | chr3.4:73638642-73638661 | MS.gene35471:intron | 35.0% |
| !! | CCTTGAAAAGGTTTGTTAAG+GGG | + | chr3.4:73638643-73638662 | MS.gene35471:intron | 35.0% |
| !! | CTCTTAGTTCTAAGGTGATT+GGG | + | chr3.4:73638071-73638090 | MS.gene35471:intron | 35.0% |
| !! | CTTGAAAAGGTTTGTTAAGG+GGG | + | chr3.4:73638644-73638663 | MS.gene35471:intron | 35.0% |
| !! | TCTTAGTTCTAAGGTGATTG+GGG | + | chr3.4:73638072-73638091 | MS.gene35471:intron | 35.0% |
| !! | TGCTGTAATATTTTAGGGGA+GGG | + | chr3.4:73638521-73638540 | MS.gene35471:intron | 35.0% |
| !! | TTGAAAAGGTTTGTTAAGGG+GGG | + | chr3.4:73638645-73638664 | MS.gene35471:intron | 35.0% |
| !!! | CCATCTTTTTCGATTTCTAG+TGG | - | chr3.4:73637204-73637223 | None:intergenic | 35.0% |
| !!! | TCTTGGCATGTTTTTTGATG+AGG | + | chr3.4:73638306-73638325 | MS.gene35471:intron | 35.0% |
| !!! | TCTTTTTCGATTTCTAGTGG+AGG | - | chr3.4:73637201-73637220 | None:intergenic | 35.0% |
| !!! | TTGTCGATTTTCTACTTGCT+TGG | + | chr3.4:73637895-73637914 | MS.gene35471:intron | 35.0% |
| AAACCAAGTTGCTTCCTGTT+CGG | - | chr3.4:73635298-73635317 | None:intergenic | 40.0% | |
| AGCAAGAAAGCAATAAAGGC+GGG | - | chr3.4:73638337-73638356 | None:intergenic | 40.0% | |
| AGCCCAGATGATCATCAAAA+TGG | + | chr3.4:73639464-73639483 | MS.gene35471:CDS | 40.0% | |
| AGCTGAAGCCAAAAGAAAGA+GGG | + | chr3.4:73639224-73639243 | MS.gene35471:CDS | 40.0% | |
| AGTAATCCCGAAACTGGAAA+TGG | + | chr3.4:73638235-73638254 | MS.gene35471:CDS | 40.0% | |
| CAACAATTTCAGCCAAAAGC+TGG | + | chr3.4:73636363-73636382 | MS.gene35471:intron | 40.0% | |
| CACATCATCAGCAAAATCCA+TGG | - | chr3.4:73635872-73635891 | None:intergenic | 40.0% | |
| CCAATCACCTTAGAACTAAG+AGG | - | chr3.4:73638073-73638092 | None:intergenic | 40.0% | |
| CCATCGAAAGATGTAGAAGA+AGG | + | chr3.4:73639593-73639612 | MS.gene35471:CDS | 40.0% | |
| CCTTCTTCTACATCTTTCGA+TGG | - | chr3.4:73639596-73639615 | None:intergenic | 40.0% | |
| CGTCTGATGTCTCATCAATT+TGG | + | chr3.4:73635721-73635740 | MS.gene35471:CDS | 40.0% | |
| GAAATTGAGTCAACAGTTGG+AGG | + | chr3.4:73636173-73636192 | MS.gene35471:CDS | 40.0% | |
| GAGCAAGAAAGCAATAAAGG+CGG | - | chr3.4:73638338-73638357 | None:intergenic | 40.0% | |
| GCAAAATCTATGGGAACAGT+TGG | - | chr3.4:73635085-73635104 | None:intergenic | 40.0% | |
| GCAATGACTTATAATCCACC+TGG | + | chr3.4:73635910-73635929 | MS.gene35471:CDS | 40.0% | |
| GCAGAAATTGAGTCAACAGT+TGG | + | chr3.4:73636170-73636189 | MS.gene35471:CDS | 40.0% | |
| GCAGTTAGGATTGTACATGA+AGG | + | chr3.4:73639523-73639542 | MS.gene35471:CDS | 40.0% | |
| GCTTGACTTACGATCAAAAC+AGG | + | chr3.4:73638203-73638222 | MS.gene35471:CDS | 40.0% | |
| GTACAATCCTAACTGCTCTA+AGG | - | chr3.4:73639519-73639538 | None:intergenic | 40.0% | |
| GTGAAGAGTAGGATAACATC+TGG | + | chr3.4:73635832-73635851 | MS.gene35471:CDS | 40.0% | |
| GTGCAGCTTCTTAATGAATC+AGG | + | chr3.4:73636957-73636976 | MS.gene35471:intron | 40.0% | |
| TACACCAAGTTTCAAAGAGG+AGG | + | chr3.4:73639439-73639458 | MS.gene35471:CDS | 40.0% | |
| TACTCCAAAGGTTATGCTAC+TGG | + | chr3.4:73635163-73635182 | MS.gene35471:CDS | 40.0% | |
| TCATCCATGCAACCTTCTAA+AGG | + | chr3.4:73636990-73637009 | MS.gene35471:CDS | 40.0% | |
| TGACTTACGATCAAAACAGG+GGG | + | chr3.4:73638206-73638225 | MS.gene35471:CDS | 40.0% | |
| TTCACAGTACCCAAATCCAT+TGG | - | chr3.4:73635817-73635836 | None:intergenic | 40.0% | |
| TTCATGAAAGGCAGCAATGA+TGG | - | chr3.4:73638870-73638889 | None:intergenic | 40.0% | |
| TTGAAAGGTAACGACGGATA+TGG | + | chr3.4:73635316-73635335 | MS.gene35471:CDS | 40.0% | |
| TTTCAAGCTTACCATCTAGG+TGG | - | chr3.4:73638451-73638470 | None:intergenic | 40.0% | |
| TTTCCAGTTTCGGGATTACT+AGG | - | chr3.4:73638235-73638254 | None:intergenic | 40.0% | |
| ! | ACTGTTCCCATAGATTTTGC+TGG | + | chr3.4:73635085-73635104 | MS.gene35471:CDS | 40.0% |
| ! | AGGAAGCAACTTGGTTTGAA+AGG | + | chr3.4:73635301-73635320 | MS.gene35471:CDS | 40.0% |
| ! | ATTTGGGTACTGTGAAGAGT+AGG | + | chr3.4:73635821-73635840 | MS.gene35471:CDS | 40.0% |
| ! | CAACGAGAGCTGTCAATTTT+TGG | + | chr3.4:73639379-73639398 | MS.gene35471:CDS | 40.0% |
| ! | CCCCTTAACAAACCTTTTCA+AGG | - | chr3.4:73638646-73638665 | None:intergenic | 40.0% |
| ! | CTTGGTTTGAAAGGTAACGA+CGG | + | chr3.4:73635310-73635329 | MS.gene35471:CDS | 40.0% |
| ! | GACAGGAATTTTCTTCTCGA+TGG | - | chr3.4:73635995-73636014 | None:intergenic | 40.0% |
| ! | GCTCAATCCTAAGCTTTTCA+GGG | - | chr3.4:73638968-73638987 | None:intergenic | 40.0% |
| ! | TTACATTTTGCAAAGCCTGC+CGG | - | chr3.4:73639269-73639288 | None:intergenic | 40.0% |
| ! | TTTTGATCGTAAGTCAAGCC+AGG | - | chr3.4:73638202-73638221 | None:intergenic | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | - | chr3.4:73636753-73636772 | None:intergenic | 40.0% |
| !! | ACAGCTCTCGTTGATTTCAA+CGG | - | chr3.4:73639372-73639391 | None:intergenic | 40.0% |
| !! | ATTTGGTTTGTACGACAGCA+AGG | - | chr3.4:73637409-73637428 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | - | chr3.4:73636754-73636773 | None:intergenic | 40.0% |
| !! | CCTCTTAGTTCTAAGGTGAT+TGG | + | chr3.4:73638070-73638089 | MS.gene35471:intron | 40.0% |
| !! | GTCAGAACCTCTTAGTTCTA+AGG | + | chr3.4:73638063-73638082 | MS.gene35471:CDS | 40.0% |
| !! | TCTACCGTCGAGCTTTATTA+AGG | + | chr3.4:73638579-73638598 | MS.gene35471:CDS | 40.0% |
| !! | TGAAAAGGTTTGTTAAGGGG+GGG | + | chr3.4:73638646-73638665 | MS.gene35471:intron | 40.0% |
| !! | TGGATTTTGCTGATGATGTG+AGG | + | chr3.4:73635872-73635891 | MS.gene35471:CDS | 40.0% |
| !! | TTTGGTTTGTACGACAGCAA+GGG | - | chr3.4:73637408-73637427 | None:intergenic | 40.0% |
| !!! | GGACTTCCATCCTTTTTCAA+AGG | - | chr3.4:73635974-73635993 | None:intergenic | 40.0% |
| !!! | TAGGTTTTGAAGGCTCAGAT+GGG | - | chr3.4:73636032-73636051 | None:intergenic | 40.0% |
| !!! | TCTTTTTTGTGGGGGGAATT+GGG | - | chr3.4:73636080-73636099 | None:intergenic | 40.0% |
| !!! | TTCTTTTTTGTGGGGGGAAT+TGG | - | chr3.4:73636081-73636100 | None:intergenic | 40.0% |
| AACGTGACCCTGAAAAGCTT+AGG | + | chr3.4:73638958-73638977 | MS.gene35471:CDS | 45.0% | |
| AATCCCGAAACTGGAAATGG+TGG | + | chr3.4:73638238-73638257 | MS.gene35471:intron | 45.0% | |
| ACACAGTATACGGCAAGCAT+CGG | + | chr3.4:73635552-73635571 | MS.gene35471:CDS | 45.0% | |
| ATCCCGAAACTGGAAATGGT+GGG | + | chr3.4:73638239-73638258 | MS.gene35471:intron | 45.0% | |
| ATGCTTGCCGTATACTGTGT+TGG | - | chr3.4:73635552-73635571 | None:intergenic | 45.0% | |
| CAAAGCGGTATGGTGTAAAG+TGG | + | chr3.4:73637602-73637621 | MS.gene35471:intron | 45.0% | |
| CAACAGTTGGAGGATATGCT+TGG | + | chr3.4:73636183-73636202 | MS.gene35471:CDS | 45.0% | |
| CAACCCCACTTAGTGGAATA+AGG | + | chr3.4:73636747-73636766 | MS.gene35471:intron | 45.0% | |
| CAAGTGAGGATGTGCTTACA+CGG | - | chr3.4:73636836-73636855 | None:intergenic | 45.0% | |
| CAAGTGATGTTGCATCCCTA+TGG | + | chr3.4:73637050-73637069 | MS.gene35471:intron | 45.0% | |
| CAGCTGAAGCCAAAAGAAAG+AGG | + | chr3.4:73639223-73639242 | MS.gene35471:CDS | 45.0% | |
| CCACTTAGTGGAATAAGGCT+TGG | + | chr3.4:73636752-73636771 | MS.gene35471:intron | 45.0% | |
| CGTCATGTGGTAGAGACTAT+GGG | + | chr3.4:73635202-73635221 | MS.gene35471:CDS | 45.0% | |
| CTTATTCCACTAAGTGGGGT+TGG | - | chr3.4:73636749-73636768 | None:intergenic | 45.0% | |
| GACTAAACTAGCTGCAACTG+AGG | - | chr3.4:73637692-73637711 | None:intergenic | 45.0% | |
| GACTTACGATCAAAACAGGG+GGG | + | chr3.4:73638207-73638226 | MS.gene35471:CDS | 45.0% | |
| GATCCTAGTAATCCCGAAAC+TGG | + | chr3.4:73638229-73638248 | MS.gene35471:CDS | 45.0% | |
| GCTGTTCAGTGAAACATACC+AGG | - | chr3.4:73639328-73639347 | None:intergenic | 45.0% | |
| GGAAATCCCTTAGAGCAGTT+AGG | + | chr3.4:73639509-73639528 | MS.gene35471:CDS | 45.0% | |
| GGCTCCTTAATAAAGCTCGA+CGG | - | chr3.4:73638586-73638605 | None:intergenic | 45.0% | |
| TATCTCCGTCGAGTGACATA+AGG | + | chr3.4:73635488-73635507 | MS.gene35471:CDS | 45.0% | |
| TATGCACTAACACGAACCAC+TGG | - | chr3.4:73637289-73637308 | None:intergenic | 45.0% | |
| TCCAAAAACTGCTGCACCAA+TGG | + | chr3.4:73635654-73635673 | MS.gene35471:CDS | 45.0% | |
| TCGTCATGTGGTAGAGACTA+TGG | + | chr3.4:73635201-73635220 | MS.gene35471:CDS | 45.0% | |
| TCTACCACATGACGAAACTC+AGG | - | chr3.4:73635196-73635215 | None:intergenic | 45.0% | |
| TGAACAGCTCTGTTTGCAGA+TGG | + | chr3.4:73639340-73639359 | MS.gene35471:intron | 45.0% | |
| TGATGTGCACAGCATAGCAT+TGG | + | chr3.4:73635936-73635955 | MS.gene35471:CDS | 45.0% | |
| TGGAGAGCCAACACAGTATA+CGG | + | chr3.4:73635542-73635561 | MS.gene35471:CDS | 45.0% | |
| TGTTCCTGAGTTTCGTCATG+TGG | + | chr3.4:73635189-73635208 | MS.gene35471:CDS | 45.0% | |
| TTCAACTAACCTGGGTATCC+AGG | + | chr3.4:73638379-73638398 | MS.gene35471:CDS | 45.0% | |
| TTGAGCGAGAAGAACTTGAG+AGG | + | chr3.4:73638982-73639001 | MS.gene35471:CDS | 45.0% | |
| TTGTCTCTGTCTCACCAGTA+GGG | + | chr3.4:73638798-73638817 | MS.gene35471:intron | 45.0% | |
| TTGTTAAGGGGGGGGTAATA+TGG | + | chr3.4:73638655-73638674 | MS.gene35471:intron | 45.0% | |
| TTTGTCTCTGTCTCACCAGT+AGG | + | chr3.4:73638797-73638816 | MS.gene35471:intron | 45.0% | |
| ! | AGCAGCTCTAGTAGTGAATC+TGG | + | chr3.4:73637255-73637274 | MS.gene35471:CDS | 45.0% |
| ! | AGGGGTCTTTTCTTACCATG+TGG | - | chr3.4:73635580-73635599 | None:intergenic | 45.0% |
| ! | CGCTCAATCCTAAGCTTTTC+AGG | - | chr3.4:73638969-73638988 | None:intergenic | 45.0% |
| ! | GTTTCACACTGTCCAGCTTT+TGG | - | chr3.4:73636378-73636397 | None:intergenic | 45.0% |
| ! | TACATTTTGCAAAGCCTGCC+GGG | - | chr3.4:73639268-73639287 | None:intergenic | 45.0% |
| ! | TCAGTATGGTGTCAGCAAAC+CGG | - | chr3.4:73638607-73638626 | None:intergenic | 45.0% |
| ! | TGGTGGGTCCCAAACTTTAT+GGG | + | chr3.4:73638255-73638274 | MS.gene35471:intron | 45.0% |
| !! | ATGGTGGGTCCCAAACTTTA+TGG | + | chr3.4:73638254-73638273 | MS.gene35471:intron | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | - | chr3.4:73636755-73636774 | None:intergenic | 45.0% |
| !! | GAAAAGGTTTGTTAAGGGGG+GGG | + | chr3.4:73638647-73638666 | MS.gene35471:intron | 45.0% |
| !! | GGCTTGGTAAAAGTGTCGTT+TGG | - | chr3.4:73636114-73636133 | None:intergenic | 45.0% |
| !! | GTACATGAAGGTTGATGACG+AGG | + | chr3.4:73639535-73639554 | MS.gene35471:CDS | 45.0% |
| !! | GTCGAGCTTTATTAAGGAGC+CGG | + | chr3.4:73638585-73638604 | MS.gene35471:CDS | 45.0% |
| !!! | GTAGGTTTTGAAGGCTCAGA+TGG | - | chr3.4:73636033-73636052 | None:intergenic | 45.0% |
| AAAGAGCAAAGTCGCATCGC+AGG | + | chr3.4:73636237-73636256 | MS.gene35471:CDS | 50.0% | |
| AGAACTTGAGAGGAGGCAGA+AGG | + | chr3.4:73638992-73639011 | MS.gene35471:CDS | 50.0% | |
| AGACTATGGGTGAGTCGGAT+GGG | + | chr3.4:73635215-73635234 | MS.gene35471:CDS | 50.0% | |
| AGAGGCAAAAGCTGCAGAAG+AGG | + | chr3.4:73639173-73639192 | MS.gene35471:CDS | 50.0% | |
| AGCCAAAAGAAAGAGGGAGC+TGG | + | chr3.4:73639230-73639249 | MS.gene35471:CDS | 50.0% | |
| AGCGAGAAGAACTTGAGAGG+AGG | + | chr3.4:73638985-73639004 | MS.gene35471:CDS | 50.0% | |
| AGCTGGACAGTGTGAAACAG+AGG | + | chr3.4:73636380-73636399 | MS.gene35471:intron | 50.0% | |
| AGGCAATGAACTGGTTGAGG+AGG | + | chr3.4:73637131-73637150 | MS.gene35471:intron | 50.0% | |
| ATGCTGTGCACATCATTGCC+AGG | - | chr3.4:73635931-73635950 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTAG+TGG | + | chr3.4:73636740-73636759 | MS.gene35471:intron | 50.0% | |
| CAGCTCCTTATGTCACTCGA+CGG | - | chr3.4:73635496-73635515 | None:intergenic | 50.0% | |
| CCAAATGCCAGGCAATGAAC+TGG | + | chr3.4:73637122-73637141 | MS.gene35471:intron | 50.0% | |
| CCAGTTCATTGCCTGGCATT+TGG | - | chr3.4:73637125-73637144 | None:intergenic | 50.0% | |
| CTGATTCCTATGCACCGAAC+AGG | + | chr3.4:73635281-73635300 | MS.gene35471:CDS | 50.0% | |
| CTGGCTTAGTCTGCAAACTC+TGG | - | chr3.4:73638409-73638428 | None:intergenic | 50.0% | |
| CTTCTGCTTCAGCTTTCCTC+CGG | - | chr3.4:73639200-73639219 | None:intergenic | 50.0% | |
| GAAAGCTCGATTGCAAGCAG+AGG | + | chr3.4:73639155-73639174 | MS.gene35471:CDS | 50.0% | |
| GAATCAGAGAGCCACCTAGA+TGG | + | chr3.4:73638437-73638456 | MS.gene35471:CDS | 50.0% | |
| GACATAAGGAGCTGCAGTGT+GGG | + | chr3.4:73635502-73635521 | MS.gene35471:CDS | 50.0% | |
| GACCCACCATTTCCAGTTTC+GGG | - | chr3.4:73638244-73638263 | None:intergenic | 50.0% | |
| GGACCCACCATTTCCAGTTT+CGG | - | chr3.4:73638245-73638264 | None:intergenic | 50.0% | |
| GGGACACGATGATCAATGAC+AGG | - | chr3.4:73636012-73636031 | None:intergenic | 50.0% | |
| GGGGGGTAATATGGTAGTTG+AGG | + | chr3.4:73638664-73638683 | MS.gene35471:intron | 50.0% | |
| GGTAGAGACTATGGGTGAGT+CGG | + | chr3.4:73635210-73635229 | MS.gene35471:CDS | 50.0% | |
| GGTGTAAAGTGGTTGCCAGT+AGG | + | chr3.4:73637613-73637632 | MS.gene35471:intron | 50.0% | |
| GTAAGAAAAGACCCCTGCCA+GGG | + | chr3.4:73635584-73635603 | MS.gene35471:CDS | 50.0% | |
| TAGGAATCAGCCGATGCAGT+CGG | - | chr3.4:73635271-73635290 | None:intergenic | 50.0% | |
| TCCTCAACCAGTTCATTGCC+TGG | - | chr3.4:73637132-73637151 | None:intergenic | 50.0% | |
| TGACATAAGGAGCTGCAGTG+TGG | + | chr3.4:73635501-73635520 | MS.gene35471:CDS | 50.0% | |
| TGATATGGAGCCGACTGCAT+CGG | + | chr3.4:73635258-73635277 | MS.gene35471:CDS | 50.0% | |
| TTCTGCTTCAGCTTTCCTCC+GGG | - | chr3.4:73639199-73639218 | None:intergenic | 50.0% | |
| TTGCAGGAAAATGTGGGACC+TGG | + | chr3.4:73638181-73638200 | MS.gene35471:intron | 50.0% | |
| TTTGGTGGGATCAAGCTGCA+GGG | + | chr3.4:73639488-73639507 | MS.gene35471:CDS | 50.0% | |
| ! | ATTTGGTGGGATCAAGCTGC+AGG | + | chr3.4:73639487-73639506 | MS.gene35471:CDS | 50.0% |
| ! | CTCCAGCTCCCTCTTTCTTT+TGG | - | chr3.4:73639235-73639254 | None:intergenic | 50.0% |
| ! | GAATCTGGCTCATCATCCAG+TGG | + | chr3.4:73637270-73637289 | MS.gene35471:CDS | 50.0% |
| ! | GCCATTGGTGCAGCAGTTTT+TGG | - | chr3.4:73635658-73635677 | None:intergenic | 50.0% |
| ! | TCTTTCAGCAGGTTCTGGCT+TGG | - | chr3.4:73636130-73636149 | None:intergenic | 50.0% |
| !! | CTCGCCTCCTCTTTGAAACT+TGG | - | chr3.4:73639446-73639465 | None:intergenic | 50.0% |
| !! | GAAGGTTGATGACGAGGATG+AGG | + | chr3.4:73639541-73639560 | MS.gene35471:CDS | 50.0% |
| !! | TTGCTTCCTGTTCGGTGCAT+AGG | - | chr3.4:73635290-73635309 | None:intergenic | 50.0% |
| AGCAAAGTCGCATCGCAGGA+GGG | + | chr3.4:73636241-73636260 | MS.gene35471:CDS | 55.0% | |
| CAAAAGCTGCAGAAGAGGCC+CGG | + | chr3.4:73639178-73639197 | MS.gene35471:CDS | 55.0% | |
| CTGTGCACATCATTGCCAGG+TGG | - | chr3.4:73635928-73635947 | None:intergenic | 55.0% | |
| CTTGAGAGGAGGCAGAAGGA+AGG | + | chr3.4:73638996-73639015 | MS.gene35471:CDS | 55.0% | |
| GAGACTATGGGTGAGTCGGA+TGG | + | chr3.4:73635214-73635233 | MS.gene35471:CDS | 55.0% | |
| GAGGACGTGGACATTGTTGG+TGG | + | chr3.4:73637150-73637169 | MS.gene35471:CDS | 55.0% | |
| GAGGAGGACGTGGACATTGT+TGG | + | chr3.4:73637147-73637166 | MS.gene35471:CDS | 55.0% | |
| GCACCGAACAGGAAGCAACT+TGG | + | chr3.4:73635292-73635311 | MS.gene35471:CDS | 55.0% | |
| GCCAGGCAATGAACTGGTTG+AGG | + | chr3.4:73637128-73637147 | MS.gene35471:intron | 55.0% | |
| GCTCGACGGTAGAGAGTTTC+AGG | - | chr3.4:73638572-73638591 | None:intergenic | 55.0% | |
| GCTGCAGTGTGGGACAGAAA+AGG | + | chr3.4:73635512-73635531 | MS.gene35471:CDS | 55.0% | |
| GGTAAGAAAAGACCCCTGCC+AGG | + | chr3.4:73635583-73635602 | MS.gene35471:CDS | 55.0% | |
| TATGGGTGAGTCGGATGGGT+TGG | + | chr3.4:73635219-73635238 | MS.gene35471:CDS | 55.0% | |
| TCTGCAAACTCTGGTCAGCC+TGG | - | chr3.4:73638400-73638419 | None:intergenic | 55.0% | |
| TGAACTGGTTGAGGAGGACG+TGG | + | chr3.4:73637137-73637156 | MS.gene35471:CDS | 55.0% | |
| ! | ATGGGTGAGTCGGATGGGTT+GGG | + | chr3.4:73635220-73635239 | MS.gene35471:CDS | 55.0% |
| ! | TGATGACGAGGATGAGGAGG+AGG | + | chr3.4:73639547-73639566 | MS.gene35471:CDS | 55.0% |
| !! | GGTTGATGACGAGGATGAGG+AGG | + | chr3.4:73639544-73639563 | MS.gene35471:CDS | 55.0% |
| !! | TAGCTCGGGGAGGGTTGATA+TGG | + | chr3.4:73635243-73635262 | MS.gene35471:CDS | 55.0% |
| AGCTGGAGAGAGAAGCAGCC+CGG | + | chr3.4:73639247-73639266 | MS.gene35471:CDS | 60.0% | |
| GAGCAAAGTCGCATCGCAGG+AGG | + | chr3.4:73636240-73636259 | MS.gene35471:CDS | 60.0% | |
| GGGACAGAAAAGGCCTCAGC+TGG | + | chr3.4:73635522-73635541 | MS.gene35471:CDS | 60.0% | |
| TCTGGTCAGCCTGGATACCC+AGG | - | chr3.4:73638391-73638410 | None:intergenic | 60.0% | |
| ! | GATGGCTCTGCAGCACTCTG+AGG | - | chr3.4:73639578-73639597 | None:intergenic | 60.0% |
| !! | CTGTGTTGGCTCTCCAGCTG+AGG | - | chr3.4:73635538-73635557 | None:intergenic | 60.0% |
| !! | GGGAGGGTGTTGCGTCTAAG+AGG | + | chr3.4:73638537-73638556 | MS.gene35471:CDS | 60.0% |
| !! | GTCGGATGGGTTGGGTAGCT+CGG | + | chr3.4:73635228-73635247 | MS.gene35471:CDS | 60.0% |
| !! | TCGGATGGGTTGGGTAGCTC+GGG | + | chr3.4:73635229-73635248 | MS.gene35471:CDS | 60.0% |
| AAGCTGCAGAAGAGGCCCGG+AGG | + | chr3.4:73639181-73639200 | MS.gene35471:CDS | 65.0% | |
| GTCTTGGGACCACTACGCCC+TGG | - | chr3.4:73635604-73635623 | None:intergenic | 65.0% | |
| ! | TGGGTTGGGTAGCTCGGGGA+GGG | + | chr3.4:73635234-73635253 | MS.gene35471:CDS | 65.0% |
| !! | ATGGGTTGGGTAGCTCGGGG+AGG | + | chr3.4:73635233-73635252 | MS.gene35471:CDS | 65.0% |
| !! | CGGATGGGTTGGGTAGCTCG+GGG | + | chr3.4:73635230-73635249 | MS.gene35471:CDS | 65.0% |
| !! | CGGCAAGCATCGGTGCCACA+TGG | + | chr3.4:73635562-73635581 | MS.gene35471:CDS | 65.0% |
| AGACCCCTGCCAGGGCGTAG+TGG | + | chr3.4:73635592-73635611 | MS.gene35471:CDS | 70.0% | |
| GGACCACTACGCCCTGGCAG+GGG | - | chr3.4:73635598-73635617 | None:intergenic | 70.0% | |
| GGAGAGAGAAGCAGCCCGGC+AGG | + | chr3.4:73639251-73639270 | MS.gene35471:CDS | 70.0% | |
| GGGACCACTACGCCCTGGCA+GGG | - | chr3.4:73635599-73635618 | None:intergenic | 70.0% | |
| TGGGACCACTACGCCCTGGC+AGG | - | chr3.4:73635600-73635619 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73635076 | 73639628 | 73635076 | ID=MS.gene35471 |
| chr3.4 | mRNA | 73635076 | 73639628 | 73635076 | ID=MS.gene35471.t1;Parent=MS.gene35471 |
| chr3.4 | exon | 73635076 | 73636287 | 73635076 | ID=MS.gene35471.t1.exon1;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73635076 | 73636287 | 73635076 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73636963 | 73637011 | 73636963 | ID=MS.gene35471.t1.exon2;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73636963 | 73637011 | 73636963 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73637133 | 73637291 | 73637133 | ID=MS.gene35471.t1.exon3;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73637133 | 73637291 | 73637133 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73638014 | 73638084 | 73638014 | ID=MS.gene35471.t1.exon4;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73638014 | 73638084 | 73638014 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73638187 | 73638256 | 73638187 | ID=MS.gene35471.t1.exon5;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73638187 | 73638256 | 73638187 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73638378 | 73638458 | 73638378 | ID=MS.gene35471.t1.exon6;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73638378 | 73638458 | 73638378 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73638537 | 73638652 | 73638537 | ID=MS.gene35471.t1.exon7;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73638537 | 73638652 | 73638537 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73638951 | 73639017 | 73638951 | ID=MS.gene35471.t1.exon8;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73638951 | 73639017 | 73638951 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73639154 | 73639284 | 73639154 | ID=MS.gene35471.t1.exon9;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73639154 | 73639284 | 73639154 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| chr3.4 | exon | 73639359 | 73639628 | 73639359 | ID=MS.gene35471.t1.exon10;Parent=MS.gene35471.t1 |
| chr3.4 | CDS | 73639359 | 73639628 | 73639359 | ID=cds.MS.gene35471.t1;Parent=MS.gene35471.t1 |
| Gene Sequence |
| Protein sequence |
