Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005653.t1 | XP_003591585.1 | 97.7 | 530 | 12 | 0 | 1 | 530 | 1 | 530 | 2.10E-295 | 1024.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005653.t1 | O82266 | 58.6 | 531 | 208 | 6 | 1 | 529 | 9 | 529 | 3.8e-168 | 592.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005653.t1 | G7I2U5 | 97.7 | 530 | 12 | 0 | 1 | 530 | 1 | 530 | 1.5e-295 | 1024.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005653.t1 | MTR_1g089260 | 97.736 | 530 | 12 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1074 |
| MS.gene005653.t1 | MTR_1g072140 | 30.409 | 171 | 114 | 5 | 80 | 249 | 22 | 188 | 1.88e-15 | 77.8 |
| MS.gene005653.t1 | MTR_4g125710 | 30.270 | 185 | 113 | 4 | 57 | 228 | 117 | 298 | 1.18e-14 | 75.5 |
| MS.gene005653.t1 | MTR_2g012630 | 23.661 | 224 | 155 | 7 | 109 | 330 | 40 | 249 | 3.47e-12 | 69.7 |
| MS.gene005653.t1 | MTR_2g012630 | 23.661 | 224 | 155 | 7 | 109 | 330 | 40 | 249 | 3.96e-12 | 69.7 |
| MS.gene005653.t1 | MTR_4g119620 | 29.000 | 200 | 126 | 8 | 74 | 263 | 18 | 211 | 5.35e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005653.t1 | AT2G47990 | 58.569 | 531 | 208 | 6 | 1 | 529 | 9 | 529 | 0.0 | 602 |
| MS.gene005653.t1 | AT4G29830 | 32.653 | 147 | 96 | 2 | 88 | 234 | 161 | 304 | 1.78e-13 | 72.0 |
| MS.gene005653.t1 | AT5G50230 | 27.027 | 185 | 117 | 6 | 138 | 319 | 277 | 446 | 1.72e-12 | 70.1 |
| MS.gene005653.t1 | AT3G49660 | 27.322 | 183 | 122 | 7 | 77 | 253 | 16 | 193 | 8.67e-12 | 67.0 |
| MS.gene005653.t1 | AT4G02730 | 25.455 | 165 | 117 | 6 | 80 | 242 | 38 | 198 | 1.20e-11 | 66.6 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 4.48e-11 | 66.2 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.04e-11 | 65.9 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.13e-11 | 65.9 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.28e-11 | 65.9 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.28e-11 | 65.9 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.28e-11 | 65.9 |
| MS.gene005653.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.28e-11 | 65.9 |
Find 0 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAACAAACTAGAATACTT+GGG | + | 8683:213983-214002 | None:intergenic | 20.0% |
| !! | TAATAAGGTTATTGAAATGA+GGG | - | 8683:214012-214031 | MS.gene005653:CDS | 20.0% |
| !!! | AAGTATTCTAGTTTGTTAAT+GGG | - | 8683:213983-214002 | MS.gene005653:CDS | 20.0% |
| !!! | ATAAGCTTTTGAATAAGTTT+AGG | - | 8683:213792-213811 | MS.gene005653:CDS | 20.0% |
| !!! | TATTTTAAGGTGTTTGATTA+CGG | - | 8683:213452-213471 | MS.gene005653:CDS | 20.0% |
| !!! | TTTTGAAAACTACTAACTTT+AGG | - | 8683:213684-213703 | MS.gene005653:CDS | 20.0% |
| ! | CATTAACAAACTAGAATACT+TGG | + | 8683:213984-214003 | None:intergenic | 25.0% |
| ! | CTAATAAGGTTATTGAAATG+AGG | - | 8683:214011-214030 | MS.gene005653:CDS | 25.0% |
| !! | AACTTTAGGTATTTTCAAAG+AGG | - | 8683:213698-213717 | MS.gene005653:CDS | 25.0% |
| !! | ACTTTAGGTATTTTCAAAGA+GGG | - | 8683:213699-213718 | MS.gene005653:CDS | 25.0% |
| !! | ATGATCATTTTGTTAAGGTT+TGG | - | 8683:213159-213178 | MS.gene005653:CDS | 25.0% |
| !! | CTCTTATGATCATTTTGTTA+AGG | - | 8683:213154-213173 | MS.gene005653:CDS | 25.0% |
| !! | TGATCATTTTGTTAAGGTTT+GGG | - | 8683:213160-213179 | MS.gene005653:CDS | 25.0% |
| !!! | CAAGTATTCTAGTTTGTTAA+TGG | - | 8683:213982-214001 | MS.gene005653:CDS | 25.0% |
| !!! | TTTTGAGTTTAGGTTTAACT+GGG | + | 8683:212620-212639 | None:intergenic | 25.0% |
| ACAAAACAATCAGAACTAAC+CGG | + | 8683:213128-213147 | None:intergenic | 30.0% | |
| AGAATTGTTTAGGGATTTGT+TGG | + | 8683:212701-212720 | None:intergenic | 30.0% | |
| ATCGAAGATTTGAATTAACC+CGG | + | 8683:212907-212926 | None:intergenic | 30.0% | |
| CACATCTAACATAATCCTTA+TGG | + | 8683:213094-213113 | None:intergenic | 30.0% | |
| CATAAGGATTATGTTAGATG+TGG | - | 8683:213092-213111 | MS.gene005653:CDS | 30.0% | |
| GTTTGATTACGGTAATATGA+AGG | - | 8683:213463-213482 | MS.gene005653:CDS | 30.0% | |
| ! | CTTTTGAATAAGTTTAGGCA+TGG | - | 8683:213797-213816 | MS.gene005653:CDS | 30.0% |
| ! | GAATTGTTTAGGGATTTGTT+GGG | + | 8683:212700-212719 | None:intergenic | 30.0% |
| ! | GATAAGTTGCATTTAGTTTC+TGG | - | 8683:213002-213021 | MS.gene005653:CDS | 30.0% |
| ! | GTGTGTTTCTGATTTAGATT+TGG | - | 8683:213910-213929 | MS.gene005653:CDS | 30.0% |
| !! | AGTTCTGATTGTTTTGTTAC+TGG | - | 8683:213131-213150 | MS.gene005653:CDS | 30.0% |
| !! | TGGTTTGGATGGTTATTTTA+AGG | - | 8683:213439-213458 | MS.gene005653:CDS | 30.0% |
| !! | TTCTAGTTTGTTAATGGGAT+TGG | - | 8683:213988-214007 | MS.gene005653:CDS | 30.0% |
| !!! | GTTTTGAGTTTAGGTTTAAC+TGG | + | 8683:212621-212640 | None:intergenic | 30.0% |
| AAAACAATCAGAACTAACCG+GGG | + | 8683:213126-213145 | None:intergenic | 35.0% | |
| AAACCTCTGAATCCAAATAC+TGG | - | 8683:212661-212680 | MS.gene005653:CDS | 35.0% | |
| AAATAAACAACATCCTCCAC+AGG | + | 8683:213239-213258 | None:intergenic | 35.0% | |
| AAATGAGGGCTGATGATATT+AGG | - | 8683:214026-214045 | MS.gene005653:CDS | 35.0% | |
| AAATGCAACTTATCATGACG+CGG | + | 8683:212996-213015 | None:intergenic | 35.0% | |
| AACATCCCAATACCTAACAA+CGG | + | 8683:213039-213058 | None:intergenic | 35.0% | |
| AAGGGATGGAGAATTGTTTA+GGG | + | 8683:212710-212729 | None:intergenic | 35.0% | |
| AATTTATGCTGCAAAGAGGA+AGG | - | 8683:213577-213596 | MS.gene005653:CDS | 35.0% | |
| AGTATTTGGATTCAGAGGTT+TGG | + | 8683:212662-212681 | None:intergenic | 35.0% | |
| ATTAAAATCCATCACCGAGT+TGG | + | 8683:213207-213226 | None:intergenic | 35.0% | |
| CAAAACAATCAGAACTAACC+GGG | + | 8683:213127-213146 | None:intergenic | 35.0% | |
| CAGTATAGGATTATGAGTGT+TGG | - | 8683:213419-213438 | MS.gene005653:CDS | 35.0% | |
| CATGGAGAGTCATAATAAGA+CGG | - | 8683:213343-213362 | MS.gene005653:CDS | 35.0% | |
| GGATAATGAACAAACCTAAC+AGG | + | 8683:212975-212994 | None:intergenic | 35.0% | |
| GGATAATTTATGCTGCAAAG+AGG | - | 8683:213573-213592 | MS.gene005653:CDS | 35.0% | |
| GTATTTGGATTCAGAGGTTT+GGG | + | 8683:212661-212680 | None:intergenic | 35.0% | |
| TGAAGGTTACTTATTCGATG+AGG | - | 8683:213480-213499 | MS.gene005653:CDS | 35.0% | |
| TGATTTAGATTTGGAGAAGC+TGG | - | 8683:213919-213938 | MS.gene005653:CDS | 35.0% | |
| TTTGAAGGAAGACCAGTATT+TGG | + | 8683:212676-212695 | None:intergenic | 35.0% | |
| ! | AAGATTTGGGATTTGATTGG+TGG | - | 8683:213302-213321 | MS.gene005653:CDS | 35.0% |
| ! | GATTGTTTGATCTAAGACGA+CGG | + | 8683:212950-212969 | None:intergenic | 35.0% |
| ! | GTCAAGATTTGGGATTTGAT+TGG | - | 8683:213299-213318 | MS.gene005653:CDS | 35.0% |
| ! | TGTTAAGGTTTGGGATGTTA+GGG | - | 8683:213169-213188 | MS.gene005653:CDS | 35.0% |
| ! | TTGTTAAGGTTTGGGATGTT+AGG | - | 8683:213168-213187 | MS.gene005653:CDS | 35.0% |
| ! | TTTTAATCATGGTTGTCCTG+TGG | - | 8683:213220-213239 | MS.gene005653:CDS | 35.0% |
| !! | ATTATGAGTGTTGGTTTGGA+TGG | - | 8683:213428-213447 | MS.gene005653:CDS | 35.0% |
| !! | GTTAATGGGATTGGCTAATA+AGG | - | 8683:213997-214016 | MS.gene005653:CDS | 35.0% |
| !! | TAGGATTATGAGTGTTGGTT+TGG | - | 8683:213424-213443 | MS.gene005653:CDS | 35.0% |
| !!! | CTTGGTTTGGTTTTGAGTTT+AGG | + | 8683:212630-212649 | None:intergenic | 35.0% |
| !!! | TCGGTGATGGATTTTAATCA+TGG | - | 8683:213209-213228 | MS.gene005653:CDS | 35.0% |
| AAGAGTTTGAGAGCTGAAGA+TGG | + | 8683:212793-212812 | None:intergenic | 40.0% | |
| AAGATTTGTGTTGGGAGGAT+CGG | - | 8683:213371-213390 | MS.gene005653:CDS | 40.0% | |
| AGACCAGTATTTGGATTCAG+AGG | + | 8683:212667-212686 | None:intergenic | 40.0% | |
| AGATTTGAATTAACCCGGAG+AGG | + | 8683:212902-212921 | None:intergenic | 40.0% | |
| AGTCGTTGCAAGAGATACAA+GGG | - | 8683:214119-214138 | MS.gene005653:CDS | 40.0% | |
| ATCACCCTAGTAGAACAATC+CGG | + | 8683:213539-213558 | None:intergenic | 40.0% | |
| ATGATGCCGTTGTTAGGTAT+TGG | - | 8683:213030-213049 | MS.gene005653:CDS | 40.0% | |
| CTTCCAGCAATTCTCAACAA+AGG | + | 8683:214154-214173 | None:intergenic | 40.0% | |
| CTTGGTTATGAAGCCAAAGA+AGG | - | 8683:213751-213770 | MS.gene005653:CDS | 40.0% | |
| GAAGGGATGGAGAATTGTTT+AGG | + | 8683:212711-212730 | None:intergenic | 40.0% | |
| GAATAAGTTTAGGCATGGTG+AGG | - | 8683:213802-213821 | MS.gene005653:CDS | 40.0% | |
| GAATACCCAACAGACAAAAG+CGG | + | 8683:213515-213534 | None:intergenic | 40.0% | |
| GATCAAACAATCGTCCTGTT+AGG | - | 8683:212958-212977 | MS.gene005653:CDS | 40.0% | |
| GATTGTTCTACTAGGGTGAT+TGG | - | 8683:213539-213558 | MS.gene005653:CDS | 40.0% | |
| TCTCCTTTGTTGAGAATTGC+TGG | - | 8683:214148-214167 | MS.gene005653:CDS | 40.0% | |
| TGATGCCGTTGTTAGGTATT+GGG | - | 8683:213031-213050 | MS.gene005653:CDS | 40.0% | |
| TGTCTAGGAAGAAGTTGTTG+AGG | - | 8683:213888-213907 | MS.gene005653:CDS | 40.0% | |
| TGTTGGAAGGTAAGAATCCA+GGG | - | 8683:213837-213856 | MS.gene005653:CDS | 40.0% | |
| TTGGGATTGTGTTCTTGGTT+TGG | + | 8683:212643-212662 | None:intergenic | 40.0% | |
| ! | AGGTATTTTCAAAGAGGGCA+AGG | - | 8683:213704-213723 | MS.gene005653:CDS | 40.0% |
| ! | ATTTGGGATTTGATTGGTGG+TGG | - | 8683:213305-213324 | MS.gene005653:CDS | 40.0% |
| ! | CGTCTTATTATGACTCTCCA+TGG | + | 8683:213345-213364 | None:intergenic | 40.0% |
| ! | GAGGATGTTGTTTATTTGCC+GGG | - | 8683:213242-213261 | MS.gene005653:CDS | 40.0% |
| ! | GGAGGATGTTGTTTATTTGC+CGG | - | 8683:213241-213260 | MS.gene005653:CDS | 40.0% |
| ! | TTTGGGATTTGATTGGTGGT+GGG | - | 8683:213306-213325 | MS.gene005653:CDS | 40.0% |
| !! | CTAGTTCGGTTTGGAGAATT+AGG | - | 8683:213636-213655 | MS.gene005653:CDS | 40.0% |
| !! | TAGGTATTGGGATGTTACTG+AGG | - | 8683:213043-213062 | MS.gene005653:CDS | 40.0% |
| !!! | AGGGATTTGTTGGGTTTTGA+AGG | + | 8683:212691-212710 | None:intergenic | 40.0% |
| AAGGTGGATGAGAAGGAAGT+TGG | - | 8683:213602-213621 | MS.gene005653:CDS | 45.0% | |
| ACCAAGTAATCACCCTCAGA+TGG | + | 8683:213737-213756 | None:intergenic | 45.0% | |
| ACCATCTGAGGGTGATTACT+TGG | - | 8683:213733-213752 | MS.gene005653:CDS | 45.0% | |
| ACGGTGACGAAGATTTGTGT+TGG | - | 8683:213362-213381 | MS.gene005653:CDS | 45.0% | |
| AGATTTGTGTTGGGAGGATC+GGG | - | 8683:213372-213391 | MS.gene005653:CDS | 45.0% | |
| AGCATCGTTACGGAAAGAGA+CGG | + | 8683:212859-212878 | None:intergenic | 45.0% | |
| AGGGTGATTGGAACTTCGAA+TGG | - | 8683:213551-213570 | MS.gene005653:CDS | 45.0% | |
| AGGTGGATGAGAAGGAAGTT+GGG | - | 8683:213603-213622 | MS.gene005653:CDS | 45.0% | |
| ATTCGCCGGATTGTTCTACT+AGG | - | 8683:213531-213550 | MS.gene005653:CDS | 45.0% | |
| CAAGGTGAGAAACCATCTGA+GGG | - | 8683:213722-213741 | MS.gene005653:CDS | 45.0% | |
| CAGTCGTTGCAAGAGATACA+AGG | - | 8683:214118-214137 | MS.gene005653:CDS | 45.0% | |
| CGGTGACGAAGATTTGTGTT+GGG | - | 8683:213363-213382 | MS.gene005653:CDS | 45.0% | |
| GAAGGTAAAGGTGGATGAGA+AGG | - | 8683:213595-213614 | MS.gene005653:CDS | 45.0% | |
| GCAGTCAACTTCACCTTCTT+TGG | + | 8683:213767-213786 | None:intergenic | 45.0% | |
| GGAATGAGTCGGATCAGTAT+AGG | - | 8683:213405-213424 | MS.gene005653:CDS | 45.0% | |
| GGATGTTACTGAGGAAACTC+CGG | - | 8683:213052-213071 | MS.gene005653:CDS | 45.0% | |
| GGGTGATTGGAACTTCGAAT+GGG | - | 8683:213552-213571 | MS.gene005653:CDS | 45.0% | |
| GTGTTGGAAGGTAAGAATCC+AGG | - | 8683:213836-213855 | MS.gene005653:CDS | 45.0% | |
| TAATCATGGTTGTCCTGTGG+AGG | - | 8683:213223-213242 | MS.gene005653:CDS | 45.0% | |
| TGACGAAGATTTGTGTTGGG+AGG | - | 8683:213366-213385 | MS.gene005653:CDS | 45.0% | |
| TGCAAAGAGGAAGGTAAAGG+TGG | - | 8683:213586-213605 | MS.gene005653:CDS | 45.0% | |
| TGCTGCAAAGAGGAAGGTAA+AGG | - | 8683:213583-213602 | MS.gene005653:CDS | 45.0% | |
| TGGGAATGCGGTCAAGATTT+GGG | - | 8683:213289-213308 | MS.gene005653:CDS | 45.0% | |
| TTCGCCGGATTGTTCTACTA+GGG | - | 8683:213532-213551 | MS.gene005653:CDS | 45.0% | |
| TTCTTCTCAGTATCCTCCAC+CGG | + | 8683:213662-213681 | None:intergenic | 45.0% | |
| TTGAGAGCTGAAGATGGAGA+GGG | + | 8683:212787-212806 | None:intergenic | 45.0% | |
| TTGTTTATTTGCCGGGTGGT+GGG | - | 8683:213249-213268 | MS.gene005653:CDS | 45.0% | |
| TTTGAGAGCTGAAGATGGAG+AGG | + | 8683:212788-212807 | None:intergenic | 45.0% | |
| TTTGTCTGTTGGGTATTCGC+CGG | - | 8683:213517-213536 | MS.gene005653:CDS | 45.0% | |
| ! | CGAAGGAAAAGGGTGGATTT+GGG | + | 8683:212746-212765 | None:intergenic | 45.0% |
| ! | GAAGGAAAAGGGTGGATTTG+GGG | + | 8683:212745-212764 | None:intergenic | 45.0% |
| ! | GAGGTTTGGGATTGTGTTCT+TGG | + | 8683:212648-212667 | None:intergenic | 45.0% |
| ! | GATGTTGTTTATTTGCCGGG+TGG | - | 8683:213245-213264 | MS.gene005653:CDS | 45.0% |
| ! | GTAGTGATGATGCCGTTGTT+AGG | - | 8683:213024-213043 | MS.gene005653:CDS | 45.0% |
| ! | GTTTGGGATGTTAGGGTTAG+AGG | - | 8683:213176-213195 | MS.gene005653:CDS | 45.0% |
| ! | TGATGGAGGAATTGGTGTCT+AGG | - | 8683:213873-213892 | MS.gene005653:CDS | 45.0% |
| ! | TTGATCTAAGACGACGGAGA+CGG | + | 8683:212944-212963 | None:intergenic | 45.0% |
| !! | TTCGGTTTGGAGAATTAGGC+CGG | - | 8683:213640-213659 | MS.gene005653:CDS | 45.0% |
| AGGTAAGAATCCAGGGCATG+TGG | - | 8683:213844-213863 | MS.gene005653:CDS | 50.0% | |
| ATCGTTACGGAAAGAGACGG+AGG | + | 8683:212856-212875 | None:intergenic | 50.0% | |
| CATGGTGTTTCGTGGCCATA+AGG | - | 8683:213076-213095 | MS.gene005653:CDS | 50.0% | |
| GAAGGATTCGGGGAATGAGT+CGG | - | 8683:213394-213413 | MS.gene005653:CDS | 50.0% | |
| GCAAGGTGAGAAACCATCTG+AGG | - | 8683:213721-213740 | MS.gene005653:CDS | 50.0% | |
| GCACTGTCGAGACAGAGATT+CGG | - | 8683:214089-214108 | MS.gene005653:CDS | 50.0% | |
| GGAGAGGGAAGCTGAATTAG+CGG | + | 8683:212772-212791 | None:intergenic | 50.0% | |
| GGATGATTGCAACAGCTGGT+GGG | - | 8683:213270-213289 | MS.gene005653:CDS | 50.0% | |
| GGTGGAGGATACTGAGAAGA+AGG | - | 8683:213661-213680 | MS.gene005653:CDS | 50.0% | |
| GGTGGATGAGAAGGAAGTTG+GGG | - | 8683:213604-213623 | MS.gene005653:CDS | 50.0% | |
| GGTTAGAGGTGAGACCAACT+CGG | - | 8683:213190-213209 | MS.gene005653:CDS | 50.0% | |
| GTGGGAATGCGGTCAAGATT+TGG | - | 8683:213288-213307 | MS.gene005653:CDS | 50.0% | |
| GTTGTTTATTTGCCGGGTGG+TGG | - | 8683:213248-213267 | MS.gene005653:CDS | 50.0% | |
| TACTGAGGAAACTCCGGTCA+TGG | - | 8683:213058-213077 | MS.gene005653:CDS | 50.0% | |
| TAGATGTGGTGATTCGTCCC+CGG | - | 8683:213106-213125 | MS.gene005653:CDS | 50.0% | |
| TGGATTTGGGGAGAAGGTGA+TGG | + | 8683:212733-212752 | None:intergenic | 50.0% | |
| TGGGAGGCTTGTGTATTCCA+TGG | - | 8683:213325-213344 | MS.gene005653:CDS | 50.0% | |
| ! | AAAGGGTGGATTTGGGGAGA+AGG | + | 8683:212739-212758 | None:intergenic | 50.0% |
| ! | GCGAAGGAAAAGGGTGGATT+TGG | + | 8683:212747-212766 | None:intergenic | 50.0% |
| ! | GGAGAAGCTGGAACTGCTTT+TGG | - | 8683:213931-213950 | MS.gene005653:CDS | 50.0% |
| ! | GGTTGCTGTGATGGAGGAAT+TGG | - | 8683:213865-213884 | MS.gene005653:CDS | 50.0% |
| ! | TGAGTGAGGCTAGTTCGGTT+TGG | - | 8683:213627-213646 | MS.gene005653:CDS | 50.0% |
| ! | TGATCTAAGACGACGGAGAC+GGG | + | 8683:212943-212962 | None:intergenic | 50.0% |
| !! | TTGGGGAGAAGGTGATGGAA+GGG | + | 8683:212728-212747 | None:intergenic | 50.0% |
| !! | TTTGGGGAGAAGGTGATGGA+AGG | + | 8683:212729-212748 | None:intergenic | 50.0% |
| ACGGAAAGAGACGGAGGAGA+CGG | + | 8683:212850-212869 | None:intergenic | 55.0% | |
| ACTCCGGTCATGGTGTTTCG+TGG | - | 8683:213068-213087 | MS.gene005653:CDS | 55.0% | |
| AGGGCATGTGGTTGCTGTGA+TGG | - | 8683:213856-213875 | MS.gene005653:CDS | 55.0% | |
| ATCACAGCAACCACATGCCC+TGG | + | 8683:213857-213876 | None:intergenic | 55.0% | |
| ATTAGCGGCGGCGAAGGAAA+AGG | + | 8683:212757-212776 | None:intergenic | 55.0% | |
| GAAGGAAGTTGGGGTGAGTG+AGG | - | 8683:213613-213632 | MS.gene005653:CDS | 55.0% | |
| GAGGGAAGCTGAATTAGCGG+CGG | + | 8683:212769-212788 | None:intergenic | 55.0% | |
| GCATGTGGTTGCTGTGATGG+AGG | - | 8683:213859-213878 | MS.gene005653:CDS | 55.0% | |
| GCTCTTGTGTGCGTGTTGGA+AGG | - | 8683:213824-213843 | MS.gene005653:CDS | 55.0% | |
| GGGATGATTGCAACAGCTGG+TGG | - | 8683:213269-213288 | MS.gene005653:CDS | 55.0% | |
| GGTGGGATGATTGCAACAGC+TGG | - | 8683:213266-213285 | MS.gene005653:CDS | 55.0% | |
| GGTTTGGAGAATTAGGCCGG+TGG | - | 8683:213643-213662 | MS.gene005653:CDS | 55.0% | |
| GTTGCAATCATCCCACCACC+CGG | + | 8683:213263-213282 | None:intergenic | 55.0% | |
| TAACCCGGAGAGGTCAGAAG+CGG | + | 8683:212892-212911 | None:intergenic | 55.0% | |
| TGAGGCTCTTGTGTGCGTGT+TGG | - | 8683:213820-213839 | MS.gene005653:CDS | 55.0% | |
| TGCAACAGCTGGTGGGAATG+CGG | - | 8683:213277-213296 | MS.gene005653:CDS | 55.0% | |
| TGGCCACGAAACACCATGAC+CGG | + | 8683:213074-213093 | None:intergenic | 55.0% | |
| TGGGAGGATCGGGAAGGATT+CGG | - | 8683:213382-213401 | MS.gene005653:CDS | 55.0% | |
| TTAGCGGCGGCGAAGGAAAA+GGG | + | 8683:212756-212775 | None:intergenic | 55.0% | |
| TTGGAGAATTAGGCCGGTGG+AGG | - | 8683:213646-213665 | MS.gene005653:CDS | 55.0% | |
| TTGTGTTGGGAGGATCGGGA+AGG | - | 8683:213376-213395 | MS.gene005653:CDS | 55.0% | |
| ! | AGGTGAGACCAACTCGGTGA+TGG | - | 8683:213196-213215 | MS.gene005653:CDS | 55.0% |
| ! | CGACGAGACGAGCATCGTTA+CGG | + | 8683:212869-212888 | None:intergenic | 55.0% |
| ! | TGGGGTGAGTGAGGCTAGTT+CGG | - | 8683:213622-213641 | MS.gene005653:CDS | 55.0% |
| !! | GGAGAAGGTGATGGAAGGGA+TGG | + | 8683:212724-212743 | None:intergenic | 55.0% |
| !! | GGGATTTGATTGGTGGTGGG+AGG | - | 8683:213309-213328 | MS.gene005653:CDS | 55.0% |
| !!! | CTGCGCCGCTTTTGTCTGTT+GGG | - | 8683:213507-213526 | MS.gene005653:CDS | 55.0% |
| AGAGACGGAGGAGACGGTGT+CGG | + | 8683:212844-212863 | None:intergenic | 60.0% | |
| AGCTGAATTAGCGGCGGCGA+AGG | + | 8683:212763-212782 | None:intergenic | 60.0% | |
| CCAACAGACAAAAGCGGCGC+AGG | + | 8683:213509-213528 | None:intergenic | 60.0% | |
| GGAGGATCGGGAAGGATTCG+GGG | - | 8683:213384-213403 | MS.gene005653:CDS | 60.0% | |
| GGGAGGATCGGGAAGGATTC+GGG | - | 8683:213383-213402 | MS.gene005653:CDS | 60.0% | |
| GTCGGAGAAGGAGGAGATGG+TGG | + | 8683:212826-212845 | None:intergenic | 60.0% | |
| ! | GGAGAAGGAGGAGATGGTGG+CGG | + | 8683:212823-212842 | None:intergenic | 60.0% |
| ! | GGTGTCGGAGAAGGAGGAGA+TGG | + | 8683:212829-212848 | None:intergenic | 60.0% |
| !! | AGGAGGAGATGGTGGCGGTT+TGG | + | 8683:212818-212837 | None:intergenic | 60.0% |
| !!! | CCTGCGCCGCTTTTGTCTGT+TGG | - | 8683:213506-213525 | MS.gene005653:CDS | 60.0% |
| GTCGCCGCTTCTGACCTCTC+CGG | - | 8683:212885-212904 | MS.gene005653:CDS | 65.0% | |
| TCGCCGCTTCTGACCTCTCC+GGG | - | 8683:212886-212905 | MS.gene005653:CDS | 65.0% | |
| ! | GGAGACGGTGTCGGAGAAGG+AGG | + | 8683:212835-212854 | None:intergenic | 65.0% |
| ! | GGAGGAGACGGTGTCGGAGA+AGG | + | 8683:212838-212857 | None:intergenic | 65.0% |
| GCGGCGGCGAAGGAAAAGGG+TGG | + | 8683:212753-212772 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8683 | gene | 212588 | 214180 | 212588 | ID=MS.gene005653 |
| 8683 | mRNA | 212588 | 214180 | 212588 | ID=MS.gene005653.t1;Parent=MS.gene005653 |
| 8683 | exon | 212588 | 214180 | 212588 | ID=MS.gene005653.t1.exon1;Parent=MS.gene005653.t1 |
| 8683 | CDS | 212588 | 214180 | 212588 | ID=cds.MS.gene005653.t1;Parent=MS.gene005653.t1 |
| Gene Sequence |
| Protein sequence |
