AlfalfaGEDB | MS.gene20679

M. sativa cultivar XinJiangDaYe / MS.gene20679

KEGG: K14549
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016070 GO:0016072 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:0110165 GO:1901360
PFAM: PF00400.35 PF09384.13

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20679.t1	XP_003591585.1	98.6	367	5	0	1	367	164	530	3.30E-207	730.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20679.t1	O82266	61.4	363	130	4	5	366	176	529	3.7e-122	439.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20679.t1	G7I2U5	98.6	367	5	0	1	367	164	530	2.4e-207	730.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049207	MS.gene20679	0.819316	1.24E-52	-1.69E-46
MS.gene049824	MS.gene20679	0.829377	5.33E-55	-1.69E-46
MS.gene049825	MS.gene20679	0.827876	1.23E-54	-1.69E-46
MS.gene049873	MS.gene20679	0.809679	1.68E-50	-1.69E-46
MS.gene050303	MS.gene20679	0.811398	7.14E-51	-1.69E-46
MS.gene050885	MS.gene20679	0.813565	2.40E-51	-1.69E-46
MS.gene051700	MS.gene20679	0.805507	1.29E-49	-1.69E-46
MS.gene05188	MS.gene20679	0.837177	6.06E-57	-1.69E-46
MS.gene052584	MS.gene20679	0.811337	7.36E-51	-1.69E-46
MS.gene052947	MS.gene20679	0.814077	1.85E-51	-1.69E-46
MS.gene053007	MS.gene20679	0.800035	1.74E-48	-1.69E-46
MS.gene053122	MS.gene20679	0.828748	7.57E-55	-1.69E-46
MS.gene053226	MS.gene20679	0.822071	2.88E-53	-1.69E-46
MS.gene055555	MS.gene20679	0.808252	3.39E-50	-1.69E-46
MS.gene055808	MS.gene20679	0.854257	1.39E-61	-1.69E-46
MS.gene056091	MS.gene20679	0.83195	1.25E-55	-1.69E-46
MS.gene056215	MS.gene20679	0.807492	4.92E-50	-1.69E-46
MS.gene056403	MS.gene20679	0.851169	1.06E-60	-1.69E-46
MS.gene056605	MS.gene20679	0.861162	1.25E-63	-1.69E-46
MS.gene05689	MS.gene20679	0.878356	3.00E-69	-1.69E-46
MS.gene057705	MS.gene20679	0.802535	5.36E-49	-1.69E-46
MS.gene05953	MS.gene20679	0.824034	1.00E-53	-1.69E-46
MS.gene05954	MS.gene20679	0.842151	3.08E-58	-1.69E-46
MS.gene059935	MS.gene20679	0.857908	1.18E-62	-1.69E-46
MS.gene06001	MS.gene20679	0.819368	1.21E-52	-1.69E-46
MS.gene060429	MS.gene20679	0.861375	1.07E-63	-1.69E-46
MS.gene060763	MS.gene20679	0.818772	1.65E-52	-1.69E-46
MS.gene060830	MS.gene20679	0.870302	1.62E-66	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene20679	MS.gene29448	PPI
MS.gene20679	MS.gene003693	PPI
MS.gene20679	MS.gene68085	PPI
MS.gene20679	MS.gene014351	PPI
MS.gene20679	MS.gene40019	PPI
MS.gene20679	MS.gene02090	PPI
MS.gene20679	MS.gene023799	PPI
MS.gene20679	MS.gene067210	PPI
MS.gene20679	MS.gene72768	PPI
MS.gene20679	MS.gene56868	PPI
MS.gene20679	MS.gene94588	PPI
MS.gene20679	MS.gene42236	PPI
MS.gene20679	MS.gene20045	PPI
MS.gene20679	MS.gene022438	PPI
MS.gene20679	MS.gene060830	PPI
MS.gene20679	MS.gene75111	PPI
MS.gene20679	MS.gene007492	PPI
MS.gene79484	MS.gene20679	PPI
MS.gene20679	MS.gene69331	PPI
MS.gene20679	MS.gene073150	PPI
MS.gene20679	MS.gene85127	PPI
MS.gene20679	MS.gene004705	PPI
MS.gene20679	MS.gene60517	PPI
MS.gene20679	MS.gene030258	PPI
MS.gene20679	MS.gene23314	PPI
MS.gene20679	MS.gene012655	PPI
MS.gene20679	MS.gene53798	PPI
MS.gene20679	MS.gene026156	PPI
MS.gene20679	MS.gene82426	PPI
MS.gene20679	MS.gene26077	PPI
MS.gene20679	MS.gene034044	PPI
MS.gene20679	MS.gene91244	PPI
MS.gene20679	MS.gene01229	PPI
MS.gene20679	MS.gene028153	PPI
MS.gene20679	MS.gene002038	PPI
MS.gene20679	MS.gene064831	PPI
MS.gene20679	MS.gene034046	PPI
MS.gene20679	MS.gene98278	PPI
MS.gene20679	MS.gene89206	PPI
MS.gene20679	MS.gene015586	PPI
MS.gene20679	MS.gene019309	PPI
MS.gene20679	MS.gene20043	PPI
MS.gene20679	MS.gene88635	PPI
MS.gene20679	MS.gene09988	PPI
MS.gene20679	MS.gene033253	PPI
MS.gene20679	MS.gene039132	PPI
MS.gene20679	MS.gene042172	PPI
MS.gene20679	MS.gene32092	PPI
MS.gene20679	MS.gene063385	PPI
MS.gene20679	MS.gene68942	PPI
MS.gene20679	MS.gene47800	PPI
MS.gene20679	MS.gene74552	PPI
MS.gene20679	MS.gene77667	PPI
MS.gene20679	MS.gene072064	PPI
MS.gene20679	MS.gene66284	PPI
MS.gene20679	MS.gene40020	PPI
MS.gene20679	MS.gene83444	PPI
MS.gene20679	MS.gene52775	PPI
MS.gene20679	MS.gene22456	PPI
MS.gene20679	MS.gene77076	PPI
MS.gene20679	MS.gene005792	PPI
MS.gene20679	MS.gene026793	PPI
MS.gene20679	MS.gene017434	PPI
MS.gene20679	MS.gene003290	PPI
MS.gene20679	MS.gene02213	PPI
MS.gene20679	MS.gene047206	PPI
MS.gene20679	MS.gene36329	PPI
MS.gene20679	MS.gene48368	PPI
MS.gene20679	MS.gene52173	PPI
MS.gene20679	MS.gene95472	PPI
MS.gene20679	MS.gene32091	PPI
MS.gene20679	MS.gene007453	PPI
MS.gene20679	MS.gene040601	PPI
MS.gene20679	MS.gene33304	PPI
MS.gene20679	MS.gene95471	PPI
MS.gene20679	MS.gene76511	PPI
MS.gene20679	MS.gene040439	PPI
MS.gene20679	MS.gene37310	PPI
MS.gene20679	MS.gene50744	PPI
MS.gene20679	MS.gene072782	PPI
MS.gene20679	MS.gene03126	PPI
MS.gene20679	MS.gene002256	PPI
MS.gene20679	MS.gene004704	PPI
MS.gene20679	MS.gene27648	PPI
MS.gene20679	MS.gene00612	PPI
MS.gene20679	MS.gene91151	PPI
MS.gene20679	MS.gene35471	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20679.t1	MTR_1g089260	98.638	367	5	0	1	367	164	530	0.0	753

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20679.t1	AT2G47990	61.433	363	130	4	5	366	176	529	2.22e-155	447

Find 113 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAGTCAACTTCACCTTCTT+TGG	0.223900	1.2:+66932573	None:intergenic
CAAGTATTCTAGTTTGTTAA+TGG	0.227969	1.2:-66932355	MS.gene20679:CDS
TTGTTAAGGTTTGGGATGTT+AGG	0.254425	1.2:-66933169	MS.gene20679:CDS
GGAGAAGCTGGAACTGCTTT+TGG	0.259476	1.2:-66932406	MS.gene20679:CDS
GTTAATGGGATTGGCTAATA+AGG	0.271721	1.2:-66932340	MS.gene20679:CDS
GGGAGGATCGGGAAGGATTC+GGG	0.272953	1.2:-66932954	MS.gene20679:CDS
CTAGTTCGGTTTGGAGAATT+AGG	0.279451	1.2:-66932701	MS.gene20679:CDS
GTGGGAATGCGGTCAAGATT+TGG	0.293697	1.2:-66933049	MS.gene20679:CDS
GTTTGGGATGTTAGGGTTAG+AGG	0.297753	1.2:-66933161	MS.gene20679:CDS
AAATGAGGGCTGATGATATT+AGG	0.325566	1.2:-66932311	MS.gene20679:CDS
CATTAACAAACTAGAATACT+TGG	0.351333	1.2:+66932356	None:intergenic
TGGGAGGATCGGGAAGGATT+CGG	0.360564	1.2:-66932955	MS.gene20679:CDS
TCTCCTTTGTTGAGAATTGC+TGG	0.363442	1.2:-66932189	MS.gene20679:CDS
AAGGTGGATGAGAAGGAAGT+TGG	0.363701	1.2:-66932735	MS.gene20679:CDS
TGGGAATGCGGTCAAGATTT+GGG	0.370097	1.2:-66933048	MS.gene20679:CDS
AAGTATTCTAGTTTGTTAAT+GGG	0.370766	1.2:-66932354	MS.gene20679:CDS
CACATCTAACATAATCCTTA+TGG	0.370873	1.2:+66933246	None:intergenic
TGATTTAGATTTGGAGAAGC+TGG	0.378998	1.2:-66932418	MS.gene20679:CDS
GTTGTTTATTTGCCGGGTGG+TGG	0.385067	1.2:-66933089	MS.gene20679:CDS
TTCTAGTTTGTTAATGGGAT+TGG	0.396417	1.2:-66932349	MS.gene20679:CDS
GGAGGATGTTGTTTATTTGC+CGG	0.402345	1.2:-66933096	MS.gene20679:CDS
TGTTAAGGTTTGGGATGTTA+GGG	0.406978	1.2:-66933168	MS.gene20679:CDS
ATTCGCCGGATTGTTCTACT+AGG	0.408446	1.2:-66932806	MS.gene20679:CDS
ACCATCTGAGGGTGATTACT+TGG	0.408850	1.2:-66932604	MS.gene20679:CDS
ACAAAACAATCAGAACTAAC+CGG	0.413789	1.2:+66933212	None:intergenic
AGGTGGATGAGAAGGAAGTT+GGG	0.415544	1.2:-66932734	MS.gene20679:CDS
GATTGTTCTACTAGGGTGAT+TGG	0.420300	1.2:-66932798	MS.gene20679:CDS
AGATTTGTGTTGGGAGGATC+GGG	0.425705	1.2:-66932965	MS.gene20679:CDS
GTGTGTTTCTGATTTAGATT+TGG	0.429034	1.2:-66932427	MS.gene20679:CDS
TAGGATTATGAGTGTTGGTT+TGG	0.431430	1.2:-66932913	MS.gene20679:CDS
AAGATTTGGGATTTGATTGG+TGG	0.437801	1.2:-66933035	MS.gene20679:CDS
GGTTGCTGTGATGGAGGAAT+TGG	0.439980	1.2:-66932472	MS.gene20679:CDS
TGGGGTGAGTGAGGCTAGTT+CGG	0.440336	1.2:-66932715	MS.gene20679:CDS
GGTGGGATGATTGCAACAGC+TGG	0.452218	1.2:-66933071	MS.gene20679:CDS
CATGGTGTTTCGTGGCCATA+AGG	0.457919	1.2:-66933261	MS.gene20679:CDS
GGGATTTGATTGGTGGTGGG+AGG	0.459347	1.2:-66933028	MS.gene20679:CDS
ATTTGGGATTTGATTGGTGG+TGG	0.460343	1.2:-66933032	MS.gene20679:CDS
AAGATTTGTGTTGGGAGGAT+CGG	0.463451	1.2:-66932966	MS.gene20679:CDS
CTAATAAGGTTATTGAAATG+AGG	0.469043	1.2:-66932326	MS.gene20679:CDS
GTCAAGATTTGGGATTTGAT+TGG	0.475359	1.2:-66933038	MS.gene20679:CDS
TGAGTGAGGCTAGTTCGGTT+TGG	0.481655	1.2:-66932710	MS.gene20679:CDS
AGGGCATGTGGTTGCTGTGA+TGG	0.482493	1.2:-66932481	MS.gene20679:CDS
CTTGGTTATGAAGCCAAAGA+AGG	0.489834	1.2:-66932586	MS.gene20679:CDS
GAAGGTAAAGGTGGATGAGA+AGG	0.491134	1.2:-66932742	MS.gene20679:CDS
GTGTTGGAAGGTAAGAATCC+AGG	0.495016	1.2:-66932501	MS.gene20679:CDS
CGGTGACGAAGATTTGTGTT+GGG	0.498679	1.2:-66932974	MS.gene20679:CDS
CAGTATAGGATTATGAGTGT+TGG	0.498953	1.2:-66932918	MS.gene20679:CDS
GTTTGATTACGGTAATATGA+AGG	0.499792	1.2:-66932874	MS.gene20679:CDS
CAGTCGTTGCAAGAGATACA+AGG	0.510806	1.2:-66932219	MS.gene20679:CDS
TTGTTTATTTGCCGGGTGGT+GGG	0.518288	1.2:-66933088	MS.gene20679:CDS
ATTATGAGTGTTGGTTTGGA+TGG	0.518342	1.2:-66932909	MS.gene20679:CDS
GGAGGATCGGGAAGGATTCG+GGG	0.520732	1.2:-66932953	MS.gene20679:CDS
CAAAACAATCAGAACTAACC+GGG	0.520896	1.2:+66933213	None:intergenic
ATCACAGCAACCACATGCCC+TGG	0.526670	1.2:+66932483	None:intergenic
GGAATGAGTCGGATCAGTAT+AGG	0.527668	1.2:-66932932	MS.gene20679:CDS
AGGGTGATTGGAACTTCGAA+TGG	0.528923	1.2:-66932786	MS.gene20679:CDS
GAAGGAAGTTGGGGTGAGTG+AGG	0.529605	1.2:-66932724	MS.gene20679:CDS
TTGGAGAATTAGGCCGGTGG+AGG	0.532273	1.2:-66932691	MS.gene20679:CDS
GCACTGTCGAGACAGAGATT+CGG	0.536660	1.2:-66932248	MS.gene20679:CDS
GAGGATGTTGTTTATTTGCC+GGG	0.537889	1.2:-66933095	MS.gene20679:CDS
TTTGGGATTTGATTGGTGGT+GGG	0.542819	1.2:-66933031	MS.gene20679:CDS
ACTCCGGTCATGGTGTTTCG+TGG	0.543833	1.2:-66933269	None:intergenic
TTCGGTTTGGAGAATTAGGC+CGG	0.544980	1.2:-66932697	MS.gene20679:CDS
AGGTGAGACCAACTCGGTGA+TGG	0.549474	1.2:-66933141	MS.gene20679:CDS
CCAACAGACAAAAGCGGCGC+AGG	0.551615	1.2:+66932831	None:intergenic
TTTGTCTGTTGGGTATTCGC+CGG	0.553778	1.2:-66932820	MS.gene20679:CDS
CGTCTTATTATGACTCTCCA+TGG	0.554512	1.2:+66932995	None:intergenic
TTCTTCTCAGTATCCTCCAC+CGG	0.556705	1.2:+66932678	None:intergenic
TAATAAGGTTATTGAAATGA+GGG	0.559117	1.2:-66932325	MS.gene20679:CDS
ATTAAAATCCATCACCGAGT+TGG	0.559727	1.2:+66933133	None:intergenic
TGATGGAGGAATTGGTGTCT+AGG	0.560038	1.2:-66932464	MS.gene20679:CDS
GGGTGATTGGAACTTCGAAT+GGG	0.571974	1.2:-66932785	MS.gene20679:CDS
CTTCCAGCAATTCTCAACAA+AGG	0.572053	1.2:+66932186	None:intergenic
GGTGGAGGATACTGAGAAGA+AGG	0.572161	1.2:-66932676	MS.gene20679:CDS
ACGGTGACGAAGATTTGTGT+TGG	0.574806	1.2:-66932975	MS.gene20679:CDS
GGGATGATTGCAACAGCTGG+TGG	0.577309	1.2:-66933068	MS.gene20679:CDS
TGGGAGGCTTGTGTATTCCA+TGG	0.578149	1.2:-66933012	MS.gene20679:CDS
TAGATGTGGTGATTCGTCCC+CGG	0.586555	1.2:-66933231	MS.gene20679:CDS
GAATAAGTTTAGGCATGGTG+AGG	0.586991	1.2:-66932535	MS.gene20679:CDS
GTTGCAATCATCCCACCACC+CGG	0.587460	1.2:+66933077	None:intergenic
TTGTGTTGGGAGGATCGGGA+AGG	0.588502	1.2:-66932961	MS.gene20679:CDS
GAAGGATTCGGGGAATGAGT+CGG	0.589250	1.2:-66932943	MS.gene20679:CDS
GGTGGATGAGAAGGAAGTTG+GGG	0.590324	1.2:-66932733	MS.gene20679:CDS
GCTCTTGTGTGCGTGTTGGA+AGG	0.593734	1.2:-66932513	MS.gene20679:CDS
ATCACCCTAGTAGAACAATC+CGG	0.594271	1.2:+66932801	None:intergenic
TGTTGGAAGGTAAGAATCCA+GGG	0.600042	1.2:-66932500	MS.gene20679:CDS
TAATCATGGTTGTCCTGTGG+AGG	0.600616	1.2:-66933114	MS.gene20679:CDS
TTCGCCGGATTGTTCTACTA+GGG	0.603643	1.2:-66932805	MS.gene20679:CDS
TGAGGCTCTTGTGTGCGTGT+TGG	0.603731	1.2:-66932517	MS.gene20679:CDS
GAATACCCAACAGACAAAAG+CGG	0.604064	1.2:+66932825	None:intergenic
TGCTGCAAAGAGGAAGGTAA+AGG	0.605968	1.2:-66932754	MS.gene20679:CDS
AATTTATGCTGCAAAGAGGA+AGG	0.608646	1.2:-66932760	MS.gene20679:CDS
ATTAACAAACTAGAATACTT+GGG	0.616436	1.2:+66932357	None:intergenic
AAATAAACAACATCCTCCAC+AGG	0.617238	1.2:+66933101	None:intergenic
ACCAAGTAATCACCCTCAGA+TGG	0.618575	1.2:+66932603	None:intergenic
GGATGATTGCAACAGCTGGT+GGG	0.618810	1.2:-66933067	MS.gene20679:CDS
AGGTAAGAATCCAGGGCATG+TGG	0.620054	1.2:-66932493	MS.gene20679:CDS
CATGGAGAGTCATAATAAGA+CGG	0.634586	1.2:-66932994	MS.gene20679:CDS
CAAGGTGAGAAACCATCTGA+GGG	0.636287	1.2:-66932615	MS.gene20679:CDS
TGACGAAGATTTGTGTTGGG+AGG	0.639147	1.2:-66932971	MS.gene20679:CDS
GCATGTGGTTGCTGTGATGG+AGG	0.640066	1.2:-66932478	MS.gene20679:CDS
GCAAGGTGAGAAACCATCTG+AGG	0.641081	1.2:-66932616	MS.gene20679:CDS
GGATAATTTATGCTGCAAAG+AGG	0.645362	1.2:-66932764	MS.gene20679:CDS
TGCAACAGCTGGTGGGAATG+CGG	0.649987	1.2:-66933060	MS.gene20679:CDS
GGTTAGAGGTGAGACCAACT+CGG	0.655570	1.2:-66933147	MS.gene20679:CDS
TGAAGGTTACTTATTCGATG+AGG	0.658542	1.2:-66932857	MS.gene20679:CDS
GGTTTGGAGAATTAGGCCGG+TGG	0.670090	1.2:-66932694	MS.gene20679:CDS
GATGTTGTTTATTTGCCGGG+TGG	0.677452	1.2:-66933092	MS.gene20679:CDS
CATAAGGATTATGTTAGATG+TGG	0.678530	1.2:-66933245	MS.gene20679:CDS
TGCAAAGAGGAAGGTAAAGG+TGG	0.681900	1.2:-66932751	MS.gene20679:CDS
AGTCGTTGCAAGAGATACAA+GGG	0.683300	1.2:-66932218	MS.gene20679:CDS
TGTCTAGGAAGAAGTTGTTG+AGG	0.703968	1.2:-66932449	MS.gene20679:CDS
AAAACAATCAGAACTAACCG+GGG	0.725083	1.2:+66933214	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAACAAACTAGAATACTT+GGG	+	chr1.2:66933085-66933104	None:intergenic	20.0%
!!	TAATAAGGTTATTGAAATGA+GGG	-	chr1.2:66933114-66933133	MS.gene20679:CDS	20.0%
!!!	AAGTATTCTAGTTTGTTAAT+GGG	-	chr1.2:66933085-66933104	MS.gene20679:CDS	20.0%
!!!	ATAAGCTTTTGAATAAGTTT+AGG	-	chr1.2:66932894-66932913	MS.gene20679:CDS	20.0%
!!!	TATTTTAAGGTGTTTGATTA+CGG	-	chr1.2:66932554-66932573	MS.gene20679:CDS	20.0%
!!!	TTTTGAAAACTACTAACTTT+AGG	-	chr1.2:66932786-66932805	MS.gene20679:CDS	20.0%
!	CATTAACAAACTAGAATACT+TGG	+	chr1.2:66933086-66933105	None:intergenic	25.0%
!	CTAATAAGGTTATTGAAATG+AGG	-	chr1.2:66933113-66933132	MS.gene20679:CDS	25.0%
!!	AACTTTAGGTATTTTCAAAG+AGG	-	chr1.2:66932800-66932819	MS.gene20679:CDS	25.0%
!!	ACTTTAGGTATTTTCAAAGA+GGG	-	chr1.2:66932801-66932820	MS.gene20679:CDS	25.0%
!!	ATGATCATTTTGTTAAGGTT+TGG	-	chr1.2:66932261-66932280	MS.gene20679:CDS	25.0%
!!	CTCTTATGATCATTTTGTTA+AGG	-	chr1.2:66932256-66932275	MS.gene20679:CDS	25.0%
!!	TGATCATTTTGTTAAGGTTT+GGG	-	chr1.2:66932262-66932281	MS.gene20679:CDS	25.0%
!!!	CAAGTATTCTAGTTTGTTAA+TGG	-	chr1.2:66933084-66933103	MS.gene20679:CDS	25.0%
	ACAAAACAATCAGAACTAAC+CGG	+	chr1.2:66932230-66932249	None:intergenic	30.0%
	CACATCTAACATAATCCTTA+TGG	+	chr1.2:66932196-66932215	None:intergenic	30.0%
	CATAAGGATTATGTTAGATG+TGG	-	chr1.2:66932194-66932213	MS.gene20679:CDS	30.0%
	GTTTGATTACGGTAATATGA+AGG	-	chr1.2:66932565-66932584	MS.gene20679:CDS	30.0%
!	CTTTTGAATAAGTTTAGGCA+TGG	-	chr1.2:66932899-66932918	MS.gene20679:CDS	30.0%
!	GTGTGTTTCTGATTTAGATT+TGG	-	chr1.2:66933012-66933031	MS.gene20679:CDS	30.0%
!!	AGTTCTGATTGTTTTGTTAC+TGG	-	chr1.2:66932233-66932252	MS.gene20679:CDS	30.0%
!!	TGGTTTGGATGGTTATTTTA+AGG	-	chr1.2:66932541-66932560	MS.gene20679:CDS	30.0%
!!	TTCTAGTTTGTTAATGGGAT+TGG	-	chr1.2:66933090-66933109	MS.gene20679:CDS	30.0%
	AAAACAATCAGAACTAACCG+GGG	+	chr1.2:66932228-66932247	None:intergenic	35.0%
	AAATAAACAACATCCTCCAC+AGG	+	chr1.2:66932341-66932360	None:intergenic	35.0%
	AAATGAGGGCTGATGATATT+AGG	-	chr1.2:66933128-66933147	MS.gene20679:CDS	35.0%
	AATTTATGCTGCAAAGAGGA+AGG	-	chr1.2:66932679-66932698	MS.gene20679:CDS	35.0%
	ATTAAAATCCATCACCGAGT+TGG	+	chr1.2:66932309-66932328	None:intergenic	35.0%
	CAAAACAATCAGAACTAACC+GGG	+	chr1.2:66932229-66932248	None:intergenic	35.0%
	CAGTATAGGATTATGAGTGT+TGG	-	chr1.2:66932521-66932540	MS.gene20679:CDS	35.0%
	CATGGAGAGTCATAATAAGA+CGG	-	chr1.2:66932445-66932464	MS.gene20679:CDS	35.0%
	GGATAATTTATGCTGCAAAG+AGG	-	chr1.2:66932675-66932694	MS.gene20679:CDS	35.0%
	TGAAGGTTACTTATTCGATG+AGG	-	chr1.2:66932582-66932601	MS.gene20679:CDS	35.0%
	TGATTTAGATTTGGAGAAGC+TGG	-	chr1.2:66933021-66933040	MS.gene20679:CDS	35.0%
!	AAGATTTGGGATTTGATTGG+TGG	-	chr1.2:66932404-66932423	MS.gene20679:CDS	35.0%
!	GTCAAGATTTGGGATTTGAT+TGG	-	chr1.2:66932401-66932420	MS.gene20679:CDS	35.0%
!	TGTTAAGGTTTGGGATGTTA+GGG	-	chr1.2:66932271-66932290	MS.gene20679:CDS	35.0%
!	TTGTTAAGGTTTGGGATGTT+AGG	-	chr1.2:66932270-66932289	MS.gene20679:CDS	35.0%
!	TTTTAATCATGGTTGTCCTG+TGG	-	chr1.2:66932322-66932341	MS.gene20679:CDS	35.0%
!!	ATTATGAGTGTTGGTTTGGA+TGG	-	chr1.2:66932530-66932549	MS.gene20679:CDS	35.0%
!!	GTTAATGGGATTGGCTAATA+AGG	-	chr1.2:66933099-66933118	MS.gene20679:CDS	35.0%
!!	TAGGATTATGAGTGTTGGTT+TGG	-	chr1.2:66932526-66932545	MS.gene20679:CDS	35.0%
!!!	TCGGTGATGGATTTTAATCA+TGG	-	chr1.2:66932311-66932330	MS.gene20679:CDS	35.0%
	AAGATTTGTGTTGGGAGGAT+CGG	-	chr1.2:66932473-66932492	MS.gene20679:CDS	40.0%
	AGTCGTTGCAAGAGATACAA+GGG	-	chr1.2:66933221-66933240	MS.gene20679:CDS	40.0%
	ATCACCCTAGTAGAACAATC+CGG	+	chr1.2:66932641-66932660	None:intergenic	40.0%
	CTTCCAGCAATTCTCAACAA+AGG	+	chr1.2:66933256-66933275	None:intergenic	40.0%
	CTTGGTTATGAAGCCAAAGA+AGG	-	chr1.2:66932853-66932872	MS.gene20679:CDS	40.0%
	GAATAAGTTTAGGCATGGTG+AGG	-	chr1.2:66932904-66932923	MS.gene20679:CDS	40.0%
	GAATACCCAACAGACAAAAG+CGG	+	chr1.2:66932617-66932636	None:intergenic	40.0%
	GATTGTTCTACTAGGGTGAT+TGG	-	chr1.2:66932641-66932660	MS.gene20679:CDS	40.0%
	TCTCCTTTGTTGAGAATTGC+TGG	-	chr1.2:66933250-66933269	MS.gene20679:CDS	40.0%
	TGTCTAGGAAGAAGTTGTTG+AGG	-	chr1.2:66932990-66933009	MS.gene20679:CDS	40.0%
	TGTTGGAAGGTAAGAATCCA+GGG	-	chr1.2:66932939-66932958	MS.gene20679:CDS	40.0%
!	AGGTATTTTCAAAGAGGGCA+AGG	-	chr1.2:66932806-66932825	MS.gene20679:CDS	40.0%
!	ATTTGGGATTTGATTGGTGG+TGG	-	chr1.2:66932407-66932426	MS.gene20679:CDS	40.0%
!	CGTCTTATTATGACTCTCCA+TGG	+	chr1.2:66932447-66932466	None:intergenic	40.0%
!	GAGGATGTTGTTTATTTGCC+GGG	-	chr1.2:66932344-66932363	MS.gene20679:CDS	40.0%
!	GGAGGATGTTGTTTATTTGC+CGG	-	chr1.2:66932343-66932362	MS.gene20679:CDS	40.0%
!	TTTGGGATTTGATTGGTGGT+GGG	-	chr1.2:66932408-66932427	MS.gene20679:CDS	40.0%
!!	CTAGTTCGGTTTGGAGAATT+AGG	-	chr1.2:66932738-66932757	MS.gene20679:CDS	40.0%
	AAGGTGGATGAGAAGGAAGT+TGG	-	chr1.2:66932704-66932723	MS.gene20679:CDS	45.0%
	ACCAAGTAATCACCCTCAGA+TGG	+	chr1.2:66932839-66932858	None:intergenic	45.0%
	ACCATCTGAGGGTGATTACT+TGG	-	chr1.2:66932835-66932854	MS.gene20679:CDS	45.0%
	ACGGTGACGAAGATTTGTGT+TGG	-	chr1.2:66932464-66932483	MS.gene20679:CDS	45.0%
	AGATTTGTGTTGGGAGGATC+GGG	-	chr1.2:66932474-66932493	MS.gene20679:CDS	45.0%
	AGGGTGATTGGAACTTCGAA+TGG	-	chr1.2:66932653-66932672	MS.gene20679:CDS	45.0%
	AGGTGGATGAGAAGGAAGTT+GGG	-	chr1.2:66932705-66932724	MS.gene20679:CDS	45.0%
	ATTCGCCGGATTGTTCTACT+AGG	-	chr1.2:66932633-66932652	MS.gene20679:CDS	45.0%
	CAAGGTGAGAAACCATCTGA+GGG	-	chr1.2:66932824-66932843	MS.gene20679:CDS	45.0%
	CAGTCGTTGCAAGAGATACA+AGG	-	chr1.2:66933220-66933239	MS.gene20679:CDS	45.0%
	CGGTGACGAAGATTTGTGTT+GGG	-	chr1.2:66932465-66932484	MS.gene20679:CDS	45.0%
	GAAGGTAAAGGTGGATGAGA+AGG	-	chr1.2:66932697-66932716	MS.gene20679:CDS	45.0%
	GCAGTCAACTTCACCTTCTT+TGG	+	chr1.2:66932869-66932888	None:intergenic	45.0%
	GGAATGAGTCGGATCAGTAT+AGG	-	chr1.2:66932507-66932526	MS.gene20679:CDS	45.0%
	GGGTGATTGGAACTTCGAAT+GGG	-	chr1.2:66932654-66932673	MS.gene20679:CDS	45.0%
	GTGTTGGAAGGTAAGAATCC+AGG	-	chr1.2:66932938-66932957	MS.gene20679:CDS	45.0%
	TAATCATGGTTGTCCTGTGG+AGG	-	chr1.2:66932325-66932344	MS.gene20679:CDS	45.0%
	TGACGAAGATTTGTGTTGGG+AGG	-	chr1.2:66932468-66932487	MS.gene20679:CDS	45.0%
	TGCAAAGAGGAAGGTAAAGG+TGG	-	chr1.2:66932688-66932707	MS.gene20679:CDS	45.0%
	TGCTGCAAAGAGGAAGGTAA+AGG	-	chr1.2:66932685-66932704	MS.gene20679:CDS	45.0%
	TGGGAATGCGGTCAAGATTT+GGG	-	chr1.2:66932391-66932410	MS.gene20679:CDS	45.0%
	TTCGCCGGATTGTTCTACTA+GGG	-	chr1.2:66932634-66932653	MS.gene20679:CDS	45.0%
	TTCTTCTCAGTATCCTCCAC+CGG	+	chr1.2:66932764-66932783	None:intergenic	45.0%
	TTGTTTATTTGCCGGGTGGT+GGG	-	chr1.2:66932351-66932370	MS.gene20679:CDS	45.0%
	TTTGTCTGTTGGGTATTCGC+CGG	-	chr1.2:66932619-66932638	MS.gene20679:CDS	45.0%
!	GATGTTGTTTATTTGCCGGG+TGG	-	chr1.2:66932347-66932366	MS.gene20679:CDS	45.0%
!	GTTTGGGATGTTAGGGTTAG+AGG	-	chr1.2:66932278-66932297	MS.gene20679:CDS	45.0%
!	TGATGGAGGAATTGGTGTCT+AGG	-	chr1.2:66932975-66932994	MS.gene20679:CDS	45.0%
!!	TTCGGTTTGGAGAATTAGGC+CGG	-	chr1.2:66932742-66932761	MS.gene20679:CDS	45.0%
	AGGTAAGAATCCAGGGCATG+TGG	-	chr1.2:66932946-66932965	MS.gene20679:CDS	50.0%
	GAAGGATTCGGGGAATGAGT+CGG	-	chr1.2:66932496-66932515	MS.gene20679:CDS	50.0%
	GCAAGGTGAGAAACCATCTG+AGG	-	chr1.2:66932823-66932842	MS.gene20679:CDS	50.0%
	GCACTGTCGAGACAGAGATT+CGG	-	chr1.2:66933191-66933210	MS.gene20679:CDS	50.0%
	GGATGATTGCAACAGCTGGT+GGG	-	chr1.2:66932372-66932391	MS.gene20679:CDS	50.0%
	GGTGGAGGATACTGAGAAGA+AGG	-	chr1.2:66932763-66932782	MS.gene20679:CDS	50.0%
	GGTGGATGAGAAGGAAGTTG+GGG	-	chr1.2:66932706-66932725	MS.gene20679:CDS	50.0%
	GGTTAGAGGTGAGACCAACT+CGG	-	chr1.2:66932292-66932311	MS.gene20679:CDS	50.0%
	GTGGGAATGCGGTCAAGATT+TGG	-	chr1.2:66932390-66932409	MS.gene20679:CDS	50.0%
	GTTGTTTATTTGCCGGGTGG+TGG	-	chr1.2:66932350-66932369	MS.gene20679:CDS	50.0%
	TAGATGTGGTGATTCGTCCC+CGG	-	chr1.2:66932208-66932227	MS.gene20679:CDS	50.0%
	TGGGAGGCTTGTGTATTCCA+TGG	-	chr1.2:66932427-66932446	MS.gene20679:CDS	50.0%
!	GGAGAAGCTGGAACTGCTTT+TGG	-	chr1.2:66933033-66933052	MS.gene20679:CDS	50.0%
!	GGTTGCTGTGATGGAGGAAT+TGG	-	chr1.2:66932967-66932986	MS.gene20679:CDS	50.0%
!	TGAGTGAGGCTAGTTCGGTT+TGG	-	chr1.2:66932729-66932748	MS.gene20679:CDS	50.0%
	AGGGCATGTGGTTGCTGTGA+TGG	-	chr1.2:66932958-66932977	MS.gene20679:CDS	55.0%
	ATCACAGCAACCACATGCCC+TGG	+	chr1.2:66932959-66932978	None:intergenic	55.0%
	GAAGGAAGTTGGGGTGAGTG+AGG	-	chr1.2:66932715-66932734	MS.gene20679:CDS	55.0%
	GCATGTGGTTGCTGTGATGG+AGG	-	chr1.2:66932961-66932980	MS.gene20679:CDS	55.0%
	GCTCTTGTGTGCGTGTTGGA+AGG	-	chr1.2:66932926-66932945	MS.gene20679:CDS	55.0%
	GGGATGATTGCAACAGCTGG+TGG	-	chr1.2:66932371-66932390	MS.gene20679:CDS	55.0%
	GGTGGGATGATTGCAACAGC+TGG	-	chr1.2:66932368-66932387	MS.gene20679:CDS	55.0%
	GGTTTGGAGAATTAGGCCGG+TGG	-	chr1.2:66932745-66932764	MS.gene20679:CDS	55.0%
	GTTGCAATCATCCCACCACC+CGG	+	chr1.2:66932365-66932384	None:intergenic	55.0%
	TGAGGCTCTTGTGTGCGTGT+TGG	-	chr1.2:66932922-66932941	MS.gene20679:CDS	55.0%
	TGCAACAGCTGGTGGGAATG+CGG	-	chr1.2:66932379-66932398	MS.gene20679:CDS	55.0%
	TGGGAGGATCGGGAAGGATT+CGG	-	chr1.2:66932484-66932503	MS.gene20679:CDS	55.0%
	TTGGAGAATTAGGCCGGTGG+AGG	-	chr1.2:66932748-66932767	MS.gene20679:CDS	55.0%
	TTGTGTTGGGAGGATCGGGA+AGG	-	chr1.2:66932478-66932497	MS.gene20679:CDS	55.0%
!	AGGTGAGACCAACTCGGTGA+TGG	-	chr1.2:66932298-66932317	MS.gene20679:CDS	55.0%
!	TGGGGTGAGTGAGGCTAGTT+CGG	-	chr1.2:66932724-66932743	MS.gene20679:CDS	55.0%
!!	GGGATTTGATTGGTGGTGGG+AGG	-	chr1.2:66932411-66932430	MS.gene20679:CDS	55.0%
!!!	CTGCGCCGCTTTTGTCTGTT+GGG	-	chr1.2:66932609-66932628	MS.gene20679:CDS	55.0%
	CCAACAGACAAAAGCGGCGC+AGG	+	chr1.2:66932611-66932630	None:intergenic	60.0%
	GGAGGATCGGGAAGGATTCG+GGG	-	chr1.2:66932486-66932505	MS.gene20679:CDS	60.0%
	GGGAGGATCGGGAAGGATTC+GGG	-	chr1.2:66932485-66932504	MS.gene20679:CDS	60.0%
!!!	CCTGCGCCGCTTTTGTCTGT+TGG	-	chr1.2:66932608-66932627	MS.gene20679:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	66932179	66933282	66932179	ID=MS.gene20679
chr1.2	mRNA	66932179	66933282	66932179	ID=MS.gene20679.t1;Parent=MS.gene20679
chr1.2	exon	66932179	66933282	66932179	ID=MS.gene20679.t1.exon1;Parent=MS.gene20679.t1
chr1.2	CDS	66932179	66933282	66932179	ID=cds.MS.gene20679.t1;Parent=MS.gene20679.t1

Gene Sequence

>MS.gene20679

ATGGTGTTTCGTGGCCATAAGGATTATGTTAGATGTGGTGATTCGTCCCCGGTTAGTTCTGATTGTTTTGTTACTGGCTCTTATGATCATTTTGTTAAGGTTTGGGATGTTAGGGTTAGAGGTGAGACCAACTCGGTGATGGATTTTAATCATGGTTGTCCTGTGGAGGATGTTGTTTATTTGCCGGGTGGTGGGATGATTGCAACAGCTGGTGGGAATGCGGTCAAGATTTGGGATTTGATTGGTGGTGGGAGGCTTGTGTATTCCATGGAGAGTCATAATAAGACGGTGACGAAGATTTGTGTTGGGAGGATCGGGAAGGATTCGGGGAATGAGTCGGATCAGTATAGGATTATGAGTGTTGGTTTGGATGGTTATTTTAAGGTGTTTGATTACGGTAATATGAAGGTTACTTATTCGATGAGGTATCCTGCGCCGCTTTTGTCTGTTGGGTATTCGCCGGATTGTTCTACTAGGGTGATTGGAACTTCGAATGGGATAATTTATGCTGCAAAGAGGAAGGTAAAGGTGGATGAGAAGGAAGTTGGGGTGAGTGAGGCTAGTTCGGTTTGGAGAATTAGGCCGGTGGAGGATACTGAGAAGAAGGTTTTGAAAACTACTAACTTTAGGTATTTTCAAAGAGGGCAAGGTGAGAAACCATCTGAGGGTGATTACTTGGTTATGAAGCCAAAGAAGGTGAAGTTGACTGCACATGATAAGCTTTTGAATAAGTTTAGGCATGGTGAGGCTCTTGTGTGCGTGTTGGAAGGTAAGAATCCAGGGCATGTGGTTGCTGTGATGGAGGAATTGGTGTCTAGGAAGAAGTTGTTGAGGTGTGTTTCTGATTTAGATTTGGAGAAGCTGGAACTGCTTTTGGCTTTCTTGCATAAGTATTGTACTGTGCCCAAGTATTCTAGTTTGTTAATGGGATTGGCTAATAAGGTTATTGAAATGAGGGCTGATGATATTAGGAATTCTGAAGTTCTCAAGAAGCATATAAGAAATCTCAAGAGCACTGTCGAGACAGAGATTCGGATTCAACAGTCGTTGCAAGAGATACAAGGGATAATTTCTCCTTTGTTGAGAATTGCTGGAAGAAGATGA

Protein sequence

>MS.gene20679.t1

MVFRGHKDYVRCGDSSPVSSDCFVTGSYDHFVKVWDVRVRGETNSVMDFNHGCPVEDVVYLPGGGMIATAGGNAVKIWDLIGGGRLVYSMESHNKTVTKICVGRIGKDSGNESDQYRIMSVGLDGYFKVFDYGNMKVTYSMRYPAPLLSVGYSPDCSTRVIGTSNGIIYAAKRKVKVDEKEVGVSEASSVWRIRPVEDTEKKVLKTTNFRYFQRGQGEKPSEGDYLVMKPKKVKLTAHDKLLNKFRHGEALVCVLEGKNPGHVVAVMEELVSRKKLLRCVSDLDLEKLELLLAFLHKYCTVPKYSSLLMGLANKVIEMRADDIRNSEVLKKHIRNLKSTVETEIRIQQSLQEIQGIISPLLRIAGRR