Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07159.t1 | XP_003591585.1 | 97.4 | 530 | 14 | 0 | 1 | 530 | 1 | 530 | 6.10E-295 | 1022.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07159.t1 | O82266 | 58.8 | 531 | 207 | 6 | 1 | 529 | 9 | 529 | 2.9e-168 | 593.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07159.t1 | G7I2U5 | 97.4 | 530 | 14 | 0 | 1 | 530 | 1 | 530 | 4.4e-295 | 1022.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053007 | MS.gene07159 | 0.802407 | 5.69E-49 | -1.69E-46 |
| MS.gene05689 | MS.gene07159 | 0.806523 | 7.89E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07159.t1 | MTR_1g089260 | 97.358 | 530 | 14 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1072 |
| MS.gene07159.t1 | MTR_1g072140 | 30.994 | 171 | 113 | 5 | 80 | 249 | 22 | 188 | 7.68e-16 | 79.0 |
| MS.gene07159.t1 | MTR_4g125710 | 30.270 | 185 | 113 | 4 | 57 | 228 | 117 | 298 | 4.86e-15 | 76.6 |
| MS.gene07159.t1 | MTR_2g012630 | 23.830 | 235 | 163 | 7 | 98 | 330 | 29 | 249 | 1.78e-12 | 70.9 |
| MS.gene07159.t1 | MTR_2g012630 | 23.830 | 235 | 163 | 7 | 98 | 330 | 29 | 249 | 2.16e-12 | 70.5 |
| MS.gene07159.t1 | MTR_4g119620 | 29.500 | 200 | 125 | 8 | 74 | 263 | 18 | 211 | 2.40e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07159.t1 | AT2G47990 | 58.757 | 531 | 207 | 6 | 1 | 529 | 9 | 529 | 0.0 | 603 |
| MS.gene07159.t1 | AT4G29830 | 32.653 | 147 | 96 | 2 | 88 | 234 | 161 | 304 | 8.48e-14 | 72.8 |
| MS.gene07159.t1 | AT5G50230 | 27.027 | 185 | 117 | 6 | 138 | 319 | 277 | 446 | 1.49e-12 | 70.5 |
| MS.gene07159.t1 | AT3G49660 | 28.415 | 183 | 120 | 7 | 77 | 253 | 16 | 193 | 2.01e-12 | 68.9 |
| MS.gene07159.t1 | AT4G02730 | 26.061 | 165 | 116 | 6 | 80 | 242 | 38 | 198 | 6.30e-12 | 67.4 |
| MS.gene07159.t1 | AT5G13480 | 24.051 | 316 | 206 | 12 | 46 | 356 | 108 | 394 | 4.98e-11 | 65.9 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.79e-11 | 65.9 |
| MS.gene07159.t1 | AT5G13480 | 24.051 | 316 | 206 | 12 | 46 | 356 | 85 | 371 | 5.90e-11 | 65.5 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.38e-11 | 65.9 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.42e-11 | 65.9 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.91e-11 | 65.5 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.91e-11 | 65.5 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.91e-11 | 65.5 |
| MS.gene07159.t1 | AT3G15980 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.91e-11 | 65.5 |
| MS.gene07159.t1 | AT5G13480 | 24.051 | 316 | 206 | 12 | 46 | 356 | 85 | 371 | 7.17e-11 | 65.5 |
| MS.gene07159.t1 | AT5G13480 | 24.051 | 316 | 206 | 12 | 46 | 356 | 97 | 383 | 8.31e-11 | 65.1 |
Find 173 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGTTTGGGATTGTGTTCT+TGG | 0.157342 | 1.4:+70942113 | None:intergenic |
| GATAAGTTGCATTTAGTTTC+TGG | 0.212466 | 1.4:-70941756 | MS.gene07159:CDS |
| GCGAAGGAAAAGGGTGGATT+TGG | 0.214434 | 1.4:+70942014 | None:intergenic |
| GCAGTCAACTTCACCTTCTT+TGG | 0.223900 | 1.4:+70940994 | None:intergenic |
| CAAGTATTCTAGTTTGTTAA+TGG | 0.227969 | 1.4:-70940776 | MS.gene07159:CDS |
| GAAGGGATGGAGAATTGTTT+AGG | 0.237807 | 1.4:+70942050 | None:intergenic |
| TTTGAAGGAAGACCAGTATT+TGG | 0.239917 | 1.4:+70942085 | None:intergenic |
| TTGTTAAGGTTTGGGATGTT+AGG | 0.254425 | 1.4:-70941590 | MS.gene07159:CDS |
| GGAGAAGCTGGAACTGCTTT+TGG | 0.259476 | 1.4:-70940827 | MS.gene07159:CDS |
| GTTAATGGGATTGGCTAATA+AGG | 0.271721 | 1.4:-70940761 | MS.gene07159:CDS |
| GGGAGGATCGGGAAGGATTC+GGG | 0.272953 | 1.4:-70941375 | MS.gene07159:CDS |
| CTAGTTCGGTTTGGAGAATT+AGG | 0.279451 | 1.4:-70941122 | MS.gene07159:CDS |
| GTGGGAATGCGGTCAAGATT+TGG | 0.293697 | 1.4:-70941470 | MS.gene07159:CDS |
| GTTTGGGATGTTAGGGTTAG+AGG | 0.297753 | 1.4:-70941582 | MS.gene07159:CDS |
| AAGGGATGGAGAATTGTTTA+GGG | 0.316527 | 1.4:+70942051 | None:intergenic |
| GTATTTGGATTCAGAGGTTT+GGG | 0.323308 | 1.4:+70942100 | None:intergenic |
| AAATGAGGGCTGATGATATT+AGG | 0.325566 | 1.4:-70940732 | MS.gene07159:CDS |
| CATTAACAAACTAGAATACT+TGG | 0.351333 | 1.4:+70940777 | None:intergenic |
| GATCAAACAATCGTCCTGTT+AGG | 0.358606 | 1.4:-70941800 | MS.gene07159:CDS |
| TGGGAGGATCGGGAAGGATT+CGG | 0.360564 | 1.4:-70941376 | MS.gene07159:CDS |
| TCTCCTTTGTTGAGAATTGC+TGG | 0.363442 | 1.4:-70940610 | MS.gene07159:CDS |
| CGAAGGAAAAGGGTGGATTT+GGG | 0.363489 | 1.4:+70942015 | None:intergenic |
| AAGGTGGATGAGAAGGAAGT+TGG | 0.363701 | 1.4:-70941156 | MS.gene07159:CDS |
| TGGGAATGCGGTCAAGATTT+GGG | 0.370097 | 1.4:-70941469 | MS.gene07159:CDS |
| AAGTATTCTAGTTTGTTAAT+GGG | 0.370766 | 1.4:-70940775 | MS.gene07159:CDS |
| CACATCTAACATAATCCTTA+TGG | 0.370873 | 1.4:+70941667 | None:intergenic |
| AGTATTTGGATTCAGAGGTT+TGG | 0.376412 | 1.4:+70942099 | None:intergenic |
| TGATTTAGATTTGGAGAAGC+TGG | 0.378998 | 1.4:-70940839 | MS.gene07159:CDS |
| GTTGTTTATTTGCCGGGTGG+TGG | 0.385067 | 1.4:-70941510 | MS.gene07159:CDS |
| TTCTAGTTTGTTAATGGGAT+TGG | 0.396417 | 1.4:-70940770 | MS.gene07159:CDS |
| AGAATTGTTTAGGGATTTGT+TGG | 0.400534 | 1.4:+70942060 | None:intergenic |
| GGAGGATGTTGTTTATTTGC+CGG | 0.402345 | 1.4:-70941517 | MS.gene07159:CDS |
| TGTTAAGGTTTGGGATGTTA+GGG | 0.406978 | 1.4:-70941589 | MS.gene07159:CDS |
| TTGGGATTGTGTTCTTGGTT+TGG | 0.407303 | 1.4:+70942118 | None:intergenic |
| ATTCGCCGGATTGTTCTACT+AGG | 0.408446 | 1.4:-70941227 | MS.gene07159:CDS |
| ACCATCTGAGGGTGATTACT+TGG | 0.408850 | 1.4:-70941025 | MS.gene07159:CDS |
| ACAAAACAATCAGAACTAAC+CGG | 0.413789 | 1.4:+70941633 | None:intergenic |
| AGGTGGATGAGAAGGAAGTT+GGG | 0.415544 | 1.4:-70941155 | MS.gene07159:CDS |
| GATTGTTCTACTAGGGTGAT+TGG | 0.420300 | 1.4:-70941219 | MS.gene07159:CDS |
| AGATTTGTGTTGGGAGGATC+GGG | 0.425705 | 1.4:-70941386 | MS.gene07159:CDS |
| TGATGCCGTTGTTAGGTATT+GGG | 0.427423 | 1.4:-70941727 | MS.gene07159:CDS |
| GTGTGTTTCTGATTTAGATT+TGG | 0.429034 | 1.4:-70940848 | MS.gene07159:CDS |
| TAGGATTATGAGTGTTGGTT+TGG | 0.431430 | 1.4:-70941334 | MS.gene07159:CDS |
| AAGATTTGGGATTTGATTGG+TGG | 0.437801 | 1.4:-70941456 | MS.gene07159:CDS |
| GGATAATGAACAAACCTAAC+AGG | 0.439146 | 1.4:+70941786 | None:intergenic |
| GGTTGCTGTGATGGAGGAAT+TGG | 0.439980 | 1.4:-70940893 | MS.gene07159:CDS |
| TGGGGTGAGTGAGGCTAGTT+CGG | 0.440336 | 1.4:-70941136 | MS.gene07159:CDS |
| AGGAGGAGATGGTGGCGGTT+TGG | 0.451413 | 1.4:+70941943 | None:intergenic |
| GGTGGGATGATTGCAACAGC+TGG | 0.452218 | 1.4:-70941492 | MS.gene07159:CDS |
| ATGATGCCGTTGTTAGGTAT+TGG | 0.452405 | 1.4:-70941728 | MS.gene07159:CDS |
| AAAGGGTGGATTTGGGGAGA+AGG | 0.453317 | 1.4:+70942022 | None:intergenic |
| ATTAGCGGCGGCGAAGGAAA+AGG | 0.456551 | 1.4:+70942004 | None:intergenic |
| CATGGTGTTTCGTGGCCATA+AGG | 0.457919 | 1.4:-70941682 | MS.gene07159:CDS |
| GGGATTTGATTGGTGGTGGG+AGG | 0.459347 | 1.4:-70941449 | MS.gene07159:CDS |
| ATTTGGGATTTGATTGGTGG+TGG | 0.460343 | 1.4:-70941453 | MS.gene07159:CDS |
| AAGATTTGTGTTGGGAGGAT+CGG | 0.463451 | 1.4:-70941387 | MS.gene07159:CDS |
| CTAATAAGGTTATTGAAATG+AGG | 0.469043 | 1.4:-70940747 | MS.gene07159:CDS |
| GTCAAGATTTGGGATTTGAT+TGG | 0.475359 | 1.4:-70941459 | MS.gene07159:CDS |
| CTCGCCGCTTCTGACCTCTC+CGG | 0.476338 | 1.4:-70941873 | MS.gene07159:CDS |
| GAATTGTTTAGGGATTTGTT+GGG | 0.479821 | 1.4:+70942061 | None:intergenic |
| TGAGTGAGGCTAGTTCGGTT+TGG | 0.481655 | 1.4:-70941131 | MS.gene07159:CDS |
| AGGGCATGTGGTTGCTGTGA+TGG | 0.482493 | 1.4:-70940902 | MS.gene07159:CDS |
| TGATCTAAGACGACGGAGAC+GGG | 0.486170 | 1.4:+70941818 | None:intergenic |
| TCGCCGCTTCTGACCTCTCC+GGG | 0.487189 | 1.4:-70941872 | MS.gene07159:CDS |
| TGGATTTGGGGAGAAGGTGA+TGG | 0.489356 | 1.4:+70942028 | None:intergenic |
| CTTGGTTATGAAGCCAAAGA+AGG | 0.489834 | 1.4:-70941007 | MS.gene07159:CDS |
| GAAGGTAAAGGTGGATGAGA+AGG | 0.491134 | 1.4:-70941163 | MS.gene07159:CDS |
| GTGTTGGAAGGTAAGAATCC+AGG | 0.495016 | 1.4:-70940922 | MS.gene07159:CDS |
| AAGAGTTTGAGAGCTGAAGA+TGG | 0.496356 | 1.4:+70941968 | None:intergenic |
| AAACCTCTGAATCCAAATAC+TGG | 0.498293 | 1.4:-70942097 | MS.gene07159:CDS |
| CGGTGACGAAGATTTGTGTT+GGG | 0.498679 | 1.4:-70941395 | MS.gene07159:CDS |
| CAGTATAGGATTATGAGTGT+TGG | 0.498953 | 1.4:-70941339 | MS.gene07159:CDS |
| GTTTGATTACGGTAATATGA+AGG | 0.499792 | 1.4:-70941295 | MS.gene07159:CDS |
| AGCTGAATTAGCGGCGGCGA+AGG | 0.501815 | 1.4:+70941998 | None:intergenic |
| CAGTCGTTGCAAGAGATACA+AGG | 0.510806 | 1.4:-70940640 | MS.gene07159:CDS |
| GGAGGAGACGGTGTCGGAGA+AGG | 0.512976 | 1.4:+70941923 | None:intergenic |
| TTTGGGGAGAAGGTGATGGA+AGG | 0.518211 | 1.4:+70942032 | None:intergenic |
| TTGTTTATTTGCCGGGTGGT+GGG | 0.518288 | 1.4:-70941509 | MS.gene07159:CDS |
| ATTATGAGTGTTGGTTTGGA+TGG | 0.518342 | 1.4:-70941330 | MS.gene07159:CDS |
| GGAGGATCGGGAAGGATTCG+GGG | 0.520732 | 1.4:-70941374 | MS.gene07159:CDS |
| CAAAACAATCAGAACTAACC+GGG | 0.520896 | 1.4:+70941634 | None:intergenic |
| GTAGTGATGATGCCGTTGTT+AGG | 0.523290 | 1.4:-70941734 | MS.gene07159:CDS |
| CGAGGAGACGAGCATCGTTA+CGG | 0.525818 | 1.4:+70941892 | None:intergenic |
| TTTGAGAGCTGAAGATGGAG+AGG | 0.526433 | 1.4:+70941973 | None:intergenic |
| ATCACAGCAACCACATGCCC+TGG | 0.526670 | 1.4:+70940904 | None:intergenic |
| GGAATGAGTCGGATCAGTAT+AGG | 0.527668 | 1.4:-70941353 | MS.gene07159:CDS |
| AGGGTGATTGGAACTTCGAA+TGG | 0.528923 | 1.4:-70941207 | MS.gene07159:CDS |
| GAAGGAAGTTGGGGTGAGTG+AGG | 0.529605 | 1.4:-70941145 | MS.gene07159:CDS |
| TTGATCTAAGACGACGGAGA+CGG | 0.530178 | 1.4:+70941817 | None:intergenic |
| TTGGAGAATTAGGCCGGTGG+AGG | 0.532273 | 1.4:-70941112 | MS.gene07159:CDS |
| GCACTGTCGAGACAGAGATT+CGG | 0.536660 | 1.4:-70940669 | MS.gene07159:CDS |
| GAGGATGTTGTTTATTTGCC+GGG | 0.537889 | 1.4:-70941516 | MS.gene07159:CDS |
| TTTGGGATTTGATTGGTGGT+GGG | 0.542819 | 1.4:-70941452 | MS.gene07159:CDS |
| ACTCCGGTCATGGTGTTTCG+TGG | 0.543833 | 1.4:-70941690 | MS.gene07159:CDS |
| TTCGGTTTGGAGAATTAGGC+CGG | 0.544980 | 1.4:-70941118 | MS.gene07159:CDS |
| AGGTGAGACCAACTCGGTGA+TGG | 0.549474 | 1.4:-70941562 | MS.gene07159:CDS |
| GGAGACGGTGTCGGAGAAGG+AGG | 0.550158 | 1.4:+70941926 | None:intergenic |
| CCAACAGACAAAAGCGGCGC+AGG | 0.551615 | 1.4:+70941252 | None:intergenic |
| AGACCAGTATTTGGATTCAG+AGG | 0.552256 | 1.4:+70942094 | None:intergenic |
| TTTGTCTGTTGGGTATTCGC+CGG | 0.553778 | 1.4:-70941241 | MS.gene07159:CDS |
| CGTCTTATTATGACTCTCCA+TGG | 0.554512 | 1.4:+70941416 | None:intergenic |
| TTAGCGGCGGCGAAGGAAAA+GGG | 0.555254 | 1.4:+70942005 | None:intergenic |
| TTCTTCTCAGTATCCTCCAC+CGG | 0.556705 | 1.4:+70941099 | None:intergenic |
| GGAGAAGGTGATGGAAGGGA+TGG | 0.558858 | 1.4:+70942037 | None:intergenic |
| TAATAAGGTTATTGAAATGA+GGG | 0.559117 | 1.4:-70940746 | MS.gene07159:CDS |
| TACTGAGGAAACTCCGGTCA+TGG | 0.559282 | 1.4:-70941700 | MS.gene07159:CDS |
| TGGCCACGAAACACCATGAC+CGG | 0.559409 | 1.4:+70941687 | None:intergenic |
| ATTAAAATCCATCACCGAGT+TGG | 0.559727 | 1.4:+70941554 | None:intergenic |
| TTGAGAGCTGAAGATGGAGA+GGG | 0.559770 | 1.4:+70941974 | None:intergenic |
| TGATGGAGGAATTGGTGTCT+AGG | 0.560038 | 1.4:-70940885 | MS.gene07159:CDS |
| ATCGAAGATTTGAATTAACC+CGG | 0.570756 | 1.4:+70941854 | None:intergenic |
| TTGGGGAGAAGGTGATGGAA+GGG | 0.571747 | 1.4:+70942033 | None:intergenic |
| GGGTGATTGGAACTTCGAAT+GGG | 0.571974 | 1.4:-70941206 | MS.gene07159:CDS |
| CTTCCAGCAATTCTCAACAA+AGG | 0.572053 | 1.4:+70940607 | None:intergenic |
| GGTGGAGGATACTGAGAAGA+AGG | 0.572161 | 1.4:-70941097 | MS.gene07159:CDS |
| ACGGTGACGAAGATTTGTGT+TGG | 0.574806 | 1.4:-70941396 | MS.gene07159:CDS |
| GGGATGATTGCAACAGCTGG+TGG | 0.577309 | 1.4:-70941489 | MS.gene07159:CDS |
| TGGGAGGCTTGTGTATTCCA+TGG | 0.578149 | 1.4:-70941433 | MS.gene07159:CDS |
| GTCGGAGAAGGAGGAGATGG+TGG | 0.579404 | 1.4:+70941935 | None:intergenic |
| GGAGAGGGAAGCTGAATTAG+CGG | 0.586229 | 1.4:+70941989 | None:intergenic |
| TAGATGTGGTGATTCGTCCC+CGG | 0.586555 | 1.4:-70941652 | MS.gene07159:CDS |
| GAATAAGTTTAGGCATGGTG+AGG | 0.586991 | 1.4:-70940956 | MS.gene07159:CDS |
| GGTGTCGGAGAAGGAGGAGA+TGG | 0.587195 | 1.4:+70941932 | None:intergenic |
| GTTGCAATCATCCCACCACC+CGG | 0.587460 | 1.4:+70941498 | None:intergenic |
| TTGTGTTGGGAGGATCGGGA+AGG | 0.588502 | 1.4:-70941382 | MS.gene07159:CDS |
| GAAGGATTCGGGGAATGAGT+CGG | 0.589250 | 1.4:-70941364 | MS.gene07159:CDS |
| GGTGGATGAGAAGGAAGTTG+GGG | 0.590324 | 1.4:-70941154 | MS.gene07159:CDS |
| TAGGTATTGGGATGTTACTG+AGG | 0.593479 | 1.4:-70941715 | MS.gene07159:CDS |
| GCTCTTGTGTGCGTGTTGGA+AGG | 0.593734 | 1.4:-70940934 | MS.gene07159:CDS |
| ATCACCCTAGTAGAACAATC+CGG | 0.594271 | 1.4:+70941222 | None:intergenic |
| TGTTGGAAGGTAAGAATCCA+GGG | 0.600042 | 1.4:-70940921 | MS.gene07159:CDS |
| TAATCATGGTTGTCCTGTGG+AGG | 0.600616 | 1.4:-70941535 | MS.gene07159:CDS |
| TTCGCCGGATTGTTCTACTA+GGG | 0.603643 | 1.4:-70941226 | MS.gene07159:CDS |
| TGAGGCTCTTGTGTGCGTGT+TGG | 0.603731 | 1.4:-70940938 | MS.gene07159:CDS |
| GAATACCCAACAGACAAAAG+CGG | 0.604064 | 1.4:+70941246 | None:intergenic |
| TGCTGCAAAGAGGAAGGTAA+AGG | 0.605968 | 1.4:-70941175 | MS.gene07159:CDS |
| AATTTATGCTGCAAAGAGGA+AGG | 0.608646 | 1.4:-70941181 | MS.gene07159:CDS |
| ATTAACAAACTAGAATACTT+GGG | 0.616436 | 1.4:+70940778 | None:intergenic |
| AAATAAACAACATCCTCCAC+AGG | 0.617238 | 1.4:+70941522 | None:intergenic |
| CGGAGAGGTCAGAAGCGGCG+AGG | 0.618345 | 1.4:+70941874 | None:intergenic |
| ACCAAGTAATCACCCTCAGA+TGG | 0.618575 | 1.4:+70941024 | None:intergenic |
| GGATGATTGCAACAGCTGGT+GGG | 0.618810 | 1.4:-70941488 | MS.gene07159:CDS |
| AGGTAAGAATCCAGGGCATG+TGG | 0.620054 | 1.4:-70940914 | MS.gene07159:CDS |
| AGAGACGGAGGAGACGGTGT+CGG | 0.621983 | 1.4:+70941917 | None:intergenic |
| GGAGAAGGAGGAGATGGTGG+CGG | 0.624254 | 1.4:+70941938 | None:intergenic |
| GAAGGAAAAGGGTGGATTTG+GGG | 0.624822 | 1.4:+70942016 | None:intergenic |
| GGATGTTACTGAGGAAACTC+CGG | 0.626392 | 1.4:-70941706 | MS.gene07159:CDS |
| ACGGAAAGAGACGGAGGAGA+CGG | 0.629393 | 1.4:+70941911 | None:intergenic |
| CATGGAGAGTCATAATAAGA+CGG | 0.634586 | 1.4:-70941415 | MS.gene07159:CDS |
| AGATTTGAATTAACCCGGAG+AGG | 0.635639 | 1.4:+70941859 | None:intergenic |
| CAAGGTGAGAAACCATCTGA+GGG | 0.636287 | 1.4:-70941036 | MS.gene07159:CDS |
| TGACGAAGATTTGTGTTGGG+AGG | 0.639147 | 1.4:-70941392 | MS.gene07159:CDS |
| GCATGTGGTTGCTGTGATGG+AGG | 0.640066 | 1.4:-70940899 | MS.gene07159:CDS |
| GCAAGGTGAGAAACCATCTG+AGG | 0.641081 | 1.4:-70941037 | MS.gene07159:CDS |
| GGATAATTTATGCTGCAAAG+AGG | 0.645362 | 1.4:-70941185 | MS.gene07159:CDS |
| TGCAACAGCTGGTGGGAATG+CGG | 0.649987 | 1.4:-70941481 | MS.gene07159:CDS |
| GGTTAGAGGTGAGACCAACT+CGG | 0.655570 | 1.4:-70941568 | MS.gene07159:CDS |
| TGAAGGTTACTTATTCGATG+AGG | 0.658542 | 1.4:-70941278 | MS.gene07159:CDS |
| GATTGTTTGATCTAAGACGA+CGG | 0.662044 | 1.4:+70941811 | None:intergenic |
| GGTTTGGAGAATTAGGCCGG+TGG | 0.670090 | 1.4:-70941115 | MS.gene07159:CDS |
| AAATGCAACTTATCATGACG+CGG | 0.673001 | 1.4:+70941765 | None:intergenic |
| AGCATCGTTACGGAAAGAGA+CGG | 0.674964 | 1.4:+70941902 | None:intergenic |
| GATGTTGTTTATTTGCCGGG+TGG | 0.677452 | 1.4:-70941513 | MS.gene07159:CDS |
| GAGGGAAGCTGAATTAGCGG+CGG | 0.678014 | 1.4:+70941992 | None:intergenic |
| CATAAGGATTATGTTAGATG+TGG | 0.678530 | 1.4:-70941666 | MS.gene07159:CDS |
| GCGGCGGCGAAGGAAAAGGG+TGG | 0.680220 | 1.4:+70942008 | None:intergenic |
| TGCAAAGAGGAAGGTAAAGG+TGG | 0.681900 | 1.4:-70941172 | MS.gene07159:CDS |
| AGTCGTTGCAAGAGATACAA+GGG | 0.683300 | 1.4:-70940639 | MS.gene07159:CDS |
| ATCGTTACGGAAAGAGACGG+AGG | 0.689504 | 1.4:+70941905 | None:intergenic |
| TAACCCGGAGAGGTCAGAAG+CGG | 0.691165 | 1.4:+70941869 | None:intergenic |
| AACATCCCAATACCTAACAA+CGG | 0.692068 | 1.4:+70941722 | None:intergenic |
| TGTCTAGGAAGAAGTTGTTG+AGG | 0.703968 | 1.4:-70940870 | MS.gene07159:CDS |
| AAAACAATCAGAACTAACCG+GGG | 0.725083 | 1.4:+70941635 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAACAAACTAGAATACTT+GGG | + | chr1.4:70941995-70942014 | None:intergenic | 20.0% |
| !! | TAATAAGGTTATTGAAATGA+GGG | - | chr1.4:70942024-70942043 | MS.gene07159:CDS | 20.0% |
| !!! | AAGTATTCTAGTTTGTTAAT+GGG | - | chr1.4:70941995-70942014 | MS.gene07159:CDS | 20.0% |
| !!! | ATAAGCTTTTGAATAAGTTT+AGG | - | chr1.4:70941804-70941823 | MS.gene07159:CDS | 20.0% |
| !!! | TATTTTAAGGTGTTTGATTA+CGG | - | chr1.4:70941464-70941483 | MS.gene07159:CDS | 20.0% |
| !!! | TTTTGAAAACTACTAACTTT+AGG | - | chr1.4:70941696-70941715 | MS.gene07159:CDS | 20.0% |
| ! | CATTAACAAACTAGAATACT+TGG | + | chr1.4:70941996-70942015 | None:intergenic | 25.0% |
| ! | CTAATAAGGTTATTGAAATG+AGG | - | chr1.4:70942023-70942042 | MS.gene07159:CDS | 25.0% |
| !! | AACTTTAGGTATTTTCAAAG+AGG | - | chr1.4:70941710-70941729 | MS.gene07159:CDS | 25.0% |
| !! | ACTTTAGGTATTTTCAAAGA+GGG | - | chr1.4:70941711-70941730 | MS.gene07159:CDS | 25.0% |
| !! | ATGATCATTTTGTTAAGGTT+TGG | - | chr1.4:70941171-70941190 | MS.gene07159:CDS | 25.0% |
| !! | CTCTTATGATCATTTTGTTA+AGG | - | chr1.4:70941166-70941185 | MS.gene07159:CDS | 25.0% |
| !! | TGATCATTTTGTTAAGGTTT+GGG | - | chr1.4:70941172-70941191 | MS.gene07159:CDS | 25.0% |
| !!! | CAAGTATTCTAGTTTGTTAA+TGG | - | chr1.4:70941994-70942013 | MS.gene07159:CDS | 25.0% |
| !!! | TTTTGAGTTTAGGTTTAACT+GGG | + | chr1.4:70940632-70940651 | None:intergenic | 25.0% |
| ACAAAACAATCAGAACTAAC+CGG | + | chr1.4:70941140-70941159 | None:intergenic | 30.0% | |
| AGAATTGTTTAGGGATTTGT+TGG | + | chr1.4:70940713-70940732 | None:intergenic | 30.0% | |
| ATCGAAGATTTGAATTAACC+CGG | + | chr1.4:70940919-70940938 | None:intergenic | 30.0% | |
| CACATCTAACATAATCCTTA+TGG | + | chr1.4:70941106-70941125 | None:intergenic | 30.0% | |
| CATAAGGATTATGTTAGATG+TGG | - | chr1.4:70941104-70941123 | MS.gene07159:CDS | 30.0% | |
| GTTTGATTACGGTAATATGA+AGG | - | chr1.4:70941475-70941494 | MS.gene07159:CDS | 30.0% | |
| ! | CTTTTGAATAAGTTTAGGCA+TGG | - | chr1.4:70941809-70941828 | MS.gene07159:CDS | 30.0% |
| ! | GAATTGTTTAGGGATTTGTT+GGG | + | chr1.4:70940712-70940731 | None:intergenic | 30.0% |
| ! | GATAAGTTGCATTTAGTTTC+TGG | - | chr1.4:70941014-70941033 | MS.gene07159:CDS | 30.0% |
| ! | GTGTGTTTCTGATTTAGATT+TGG | - | chr1.4:70941922-70941941 | MS.gene07159:CDS | 30.0% |
| !! | AGTTCTGATTGTTTTGTTAC+TGG | - | chr1.4:70941143-70941162 | MS.gene07159:CDS | 30.0% |
| !! | TGGTTTGGATGGTTATTTTA+AGG | - | chr1.4:70941451-70941470 | MS.gene07159:CDS | 30.0% |
| !! | TTCTAGTTTGTTAATGGGAT+TGG | - | chr1.4:70942000-70942019 | MS.gene07159:CDS | 30.0% |
| !!! | GTTTTGAGTTTAGGTTTAAC+TGG | + | chr1.4:70940633-70940652 | None:intergenic | 30.0% |
| AAAACAATCAGAACTAACCG+GGG | + | chr1.4:70941138-70941157 | None:intergenic | 35.0% | |
| AAACCTCTGAATCCAAATAC+TGG | - | chr1.4:70940673-70940692 | MS.gene07159:CDS | 35.0% | |
| AAATAAACAACATCCTCCAC+AGG | + | chr1.4:70941251-70941270 | None:intergenic | 35.0% | |
| AAATGAGGGCTGATGATATT+AGG | - | chr1.4:70942038-70942057 | MS.gene07159:CDS | 35.0% | |
| AAATGCAACTTATCATGACG+CGG | + | chr1.4:70941008-70941027 | None:intergenic | 35.0% | |
| AACATCCCAATACCTAACAA+CGG | + | chr1.4:70941051-70941070 | None:intergenic | 35.0% | |
| AAGGGATGGAGAATTGTTTA+GGG | + | chr1.4:70940722-70940741 | None:intergenic | 35.0% | |
| AATTTATGCTGCAAAGAGGA+AGG | - | chr1.4:70941589-70941608 | MS.gene07159:CDS | 35.0% | |
| AGTATTTGGATTCAGAGGTT+TGG | + | chr1.4:70940674-70940693 | None:intergenic | 35.0% | |
| ATTAAAATCCATCACCGAGT+TGG | + | chr1.4:70941219-70941238 | None:intergenic | 35.0% | |
| CAAAACAATCAGAACTAACC+GGG | + | chr1.4:70941139-70941158 | None:intergenic | 35.0% | |
| CAGTATAGGATTATGAGTGT+TGG | - | chr1.4:70941431-70941450 | MS.gene07159:CDS | 35.0% | |
| CATGGAGAGTCATAATAAGA+CGG | - | chr1.4:70941355-70941374 | MS.gene07159:CDS | 35.0% | |
| GGATAATGAACAAACCTAAC+AGG | + | chr1.4:70940987-70941006 | None:intergenic | 35.0% | |
| GGATAATTTATGCTGCAAAG+AGG | - | chr1.4:70941585-70941604 | MS.gene07159:CDS | 35.0% | |
| GTATTTGGATTCAGAGGTTT+GGG | + | chr1.4:70940673-70940692 | None:intergenic | 35.0% | |
| TGAAGGTTACTTATTCGATG+AGG | - | chr1.4:70941492-70941511 | MS.gene07159:CDS | 35.0% | |
| TGATTTAGATTTGGAGAAGC+TGG | - | chr1.4:70941931-70941950 | MS.gene07159:CDS | 35.0% | |
| TTTGAAGGAAGACCAGTATT+TGG | + | chr1.4:70940688-70940707 | None:intergenic | 35.0% | |
| ! | AAGATTTGGGATTTGATTGG+TGG | - | chr1.4:70941314-70941333 | MS.gene07159:CDS | 35.0% |
| ! | GATTGTTTGATCTAAGACGA+CGG | + | chr1.4:70940962-70940981 | None:intergenic | 35.0% |
| ! | GTCAAGATTTGGGATTTGAT+TGG | - | chr1.4:70941311-70941330 | MS.gene07159:CDS | 35.0% |
| ! | TGTTAAGGTTTGGGATGTTA+GGG | - | chr1.4:70941181-70941200 | MS.gene07159:CDS | 35.0% |
| ! | TTGTTAAGGTTTGGGATGTT+AGG | - | chr1.4:70941180-70941199 | MS.gene07159:CDS | 35.0% |
| ! | TTTTAATCATGGTTGTCCTG+TGG | - | chr1.4:70941232-70941251 | MS.gene07159:CDS | 35.0% |
| !! | ATTATGAGTGTTGGTTTGGA+TGG | - | chr1.4:70941440-70941459 | MS.gene07159:CDS | 35.0% |
| !! | GTTAATGGGATTGGCTAATA+AGG | - | chr1.4:70942009-70942028 | MS.gene07159:CDS | 35.0% |
| !! | TAGGATTATGAGTGTTGGTT+TGG | - | chr1.4:70941436-70941455 | MS.gene07159:CDS | 35.0% |
| !!! | CTTGGTTTGGTTTTGAGTTT+AGG | + | chr1.4:70940642-70940661 | None:intergenic | 35.0% |
| !!! | TCGGTGATGGATTTTAATCA+TGG | - | chr1.4:70941221-70941240 | MS.gene07159:CDS | 35.0% |
| AAGAGTTTGAGAGCTGAAGA+TGG | + | chr1.4:70940805-70940824 | None:intergenic | 40.0% | |
| AAGATTTGTGTTGGGAGGAT+CGG | - | chr1.4:70941383-70941402 | MS.gene07159:CDS | 40.0% | |
| AGACCAGTATTTGGATTCAG+AGG | + | chr1.4:70940679-70940698 | None:intergenic | 40.0% | |
| AGATTTGAATTAACCCGGAG+AGG | + | chr1.4:70940914-70940933 | None:intergenic | 40.0% | |
| AGTCGTTGCAAGAGATACAA+GGG | - | chr1.4:70942131-70942150 | MS.gene07159:CDS | 40.0% | |
| ATCACCCTAGTAGAACAATC+CGG | + | chr1.4:70941551-70941570 | None:intergenic | 40.0% | |
| ATGATGCCGTTGTTAGGTAT+TGG | - | chr1.4:70941042-70941061 | MS.gene07159:CDS | 40.0% | |
| CTTCCAGCAATTCTCAACAA+AGG | + | chr1.4:70942166-70942185 | None:intergenic | 40.0% | |
| CTTGGTTATGAAGCCAAAGA+AGG | - | chr1.4:70941763-70941782 | MS.gene07159:CDS | 40.0% | |
| GAAGGGATGGAGAATTGTTT+AGG | + | chr1.4:70940723-70940742 | None:intergenic | 40.0% | |
| GAATAAGTTTAGGCATGGTG+AGG | - | chr1.4:70941814-70941833 | MS.gene07159:CDS | 40.0% | |
| GAATACCCAACAGACAAAAG+CGG | + | chr1.4:70941527-70941546 | None:intergenic | 40.0% | |
| GATCAAACAATCGTCCTGTT+AGG | - | chr1.4:70940970-70940989 | MS.gene07159:CDS | 40.0% | |
| GATTGTTCTACTAGGGTGAT+TGG | - | chr1.4:70941551-70941570 | MS.gene07159:CDS | 40.0% | |
| TCTCCTTTGTTGAGAATTGC+TGG | - | chr1.4:70942160-70942179 | MS.gene07159:CDS | 40.0% | |
| TGATGCCGTTGTTAGGTATT+GGG | - | chr1.4:70941043-70941062 | MS.gene07159:CDS | 40.0% | |
| TGTCTAGGAAGAAGTTGTTG+AGG | - | chr1.4:70941900-70941919 | MS.gene07159:CDS | 40.0% | |
| TGTTGGAAGGTAAGAATCCA+GGG | - | chr1.4:70941849-70941868 | MS.gene07159:CDS | 40.0% | |
| TTGGGATTGTGTTCTTGGTT+TGG | + | chr1.4:70940655-70940674 | None:intergenic | 40.0% | |
| ! | AGGTATTTTCAAAGAGGGCA+AGG | - | chr1.4:70941716-70941735 | MS.gene07159:CDS | 40.0% |
| ! | ATTTGGGATTTGATTGGTGG+TGG | - | chr1.4:70941317-70941336 | MS.gene07159:CDS | 40.0% |
| ! | CGTCTTATTATGACTCTCCA+TGG | + | chr1.4:70941357-70941376 | None:intergenic | 40.0% |
| ! | GAGGATGTTGTTTATTTGCC+GGG | - | chr1.4:70941254-70941273 | MS.gene07159:CDS | 40.0% |
| ! | GGAGGATGTTGTTTATTTGC+CGG | - | chr1.4:70941253-70941272 | MS.gene07159:CDS | 40.0% |
| ! | TTTGGGATTTGATTGGTGGT+GGG | - | chr1.4:70941318-70941337 | MS.gene07159:CDS | 40.0% |
| !! | CTAGTTCGGTTTGGAGAATT+AGG | - | chr1.4:70941648-70941667 | MS.gene07159:CDS | 40.0% |
| !! | TAGGTATTGGGATGTTACTG+AGG | - | chr1.4:70941055-70941074 | MS.gene07159:CDS | 40.0% |
| !!! | AGGGATTTGTTGGGTTTTGA+AGG | + | chr1.4:70940703-70940722 | None:intergenic | 40.0% |
| AAGGTGGATGAGAAGGAAGT+TGG | - | chr1.4:70941614-70941633 | MS.gene07159:CDS | 45.0% | |
| ACCAAGTAATCACCCTCAGA+TGG | + | chr1.4:70941749-70941768 | None:intergenic | 45.0% | |
| ACCATCTGAGGGTGATTACT+TGG | - | chr1.4:70941745-70941764 | MS.gene07159:CDS | 45.0% | |
| ACGGTGACGAAGATTTGTGT+TGG | - | chr1.4:70941374-70941393 | MS.gene07159:CDS | 45.0% | |
| AGATTTGTGTTGGGAGGATC+GGG | - | chr1.4:70941384-70941403 | MS.gene07159:CDS | 45.0% | |
| AGCATCGTTACGGAAAGAGA+CGG | + | chr1.4:70940871-70940890 | None:intergenic | 45.0% | |
| AGGGTGATTGGAACTTCGAA+TGG | - | chr1.4:70941563-70941582 | MS.gene07159:CDS | 45.0% | |
| AGGTGGATGAGAAGGAAGTT+GGG | - | chr1.4:70941615-70941634 | MS.gene07159:CDS | 45.0% | |
| ATTCGCCGGATTGTTCTACT+AGG | - | chr1.4:70941543-70941562 | MS.gene07159:CDS | 45.0% | |
| CAAGGTGAGAAACCATCTGA+GGG | - | chr1.4:70941734-70941753 | MS.gene07159:CDS | 45.0% | |
| CAGTCGTTGCAAGAGATACA+AGG | - | chr1.4:70942130-70942149 | MS.gene07159:CDS | 45.0% | |
| CGGTGACGAAGATTTGTGTT+GGG | - | chr1.4:70941375-70941394 | MS.gene07159:CDS | 45.0% | |
| GAAGGTAAAGGTGGATGAGA+AGG | - | chr1.4:70941607-70941626 | MS.gene07159:CDS | 45.0% | |
| GCAGTCAACTTCACCTTCTT+TGG | + | chr1.4:70941779-70941798 | None:intergenic | 45.0% | |
| GGAATGAGTCGGATCAGTAT+AGG | - | chr1.4:70941417-70941436 | MS.gene07159:CDS | 45.0% | |
| GGATGTTACTGAGGAAACTC+CGG | - | chr1.4:70941064-70941083 | MS.gene07159:CDS | 45.0% | |
| GGGTGATTGGAACTTCGAAT+GGG | - | chr1.4:70941564-70941583 | MS.gene07159:CDS | 45.0% | |
| GTGTTGGAAGGTAAGAATCC+AGG | - | chr1.4:70941848-70941867 | MS.gene07159:CDS | 45.0% | |
| TAATCATGGTTGTCCTGTGG+AGG | - | chr1.4:70941235-70941254 | MS.gene07159:CDS | 45.0% | |
| TGACGAAGATTTGTGTTGGG+AGG | - | chr1.4:70941378-70941397 | MS.gene07159:CDS | 45.0% | |
| TGCAAAGAGGAAGGTAAAGG+TGG | - | chr1.4:70941598-70941617 | MS.gene07159:CDS | 45.0% | |
| TGCTGCAAAGAGGAAGGTAA+AGG | - | chr1.4:70941595-70941614 | MS.gene07159:CDS | 45.0% | |
| TGGGAATGCGGTCAAGATTT+GGG | - | chr1.4:70941301-70941320 | MS.gene07159:CDS | 45.0% | |
| TTCGCCGGATTGTTCTACTA+GGG | - | chr1.4:70941544-70941563 | MS.gene07159:CDS | 45.0% | |
| TTCTTCTCAGTATCCTCCAC+CGG | + | chr1.4:70941674-70941693 | None:intergenic | 45.0% | |
| TTGAGAGCTGAAGATGGAGA+GGG | + | chr1.4:70940799-70940818 | None:intergenic | 45.0% | |
| TTGTTTATTTGCCGGGTGGT+GGG | - | chr1.4:70941261-70941280 | MS.gene07159:CDS | 45.0% | |
| TTTGAGAGCTGAAGATGGAG+AGG | + | chr1.4:70940800-70940819 | None:intergenic | 45.0% | |
| TTTGTCTGTTGGGTATTCGC+CGG | - | chr1.4:70941529-70941548 | MS.gene07159:CDS | 45.0% | |
| ! | CGAAGGAAAAGGGTGGATTT+GGG | + | chr1.4:70940758-70940777 | None:intergenic | 45.0% |
| ! | GAAGGAAAAGGGTGGATTTG+GGG | + | chr1.4:70940757-70940776 | None:intergenic | 45.0% |
| ! | GAGGTTTGGGATTGTGTTCT+TGG | + | chr1.4:70940660-70940679 | None:intergenic | 45.0% |
| ! | GATGTTGTTTATTTGCCGGG+TGG | - | chr1.4:70941257-70941276 | MS.gene07159:CDS | 45.0% |
| ! | GTAGTGATGATGCCGTTGTT+AGG | - | chr1.4:70941036-70941055 | MS.gene07159:CDS | 45.0% |
| ! | GTTTGGGATGTTAGGGTTAG+AGG | - | chr1.4:70941188-70941207 | MS.gene07159:CDS | 45.0% |
| ! | TGATGGAGGAATTGGTGTCT+AGG | - | chr1.4:70941885-70941904 | MS.gene07159:CDS | 45.0% |
| ! | TTGATCTAAGACGACGGAGA+CGG | + | chr1.4:70940956-70940975 | None:intergenic | 45.0% |
| !! | TTCGGTTTGGAGAATTAGGC+CGG | - | chr1.4:70941652-70941671 | MS.gene07159:CDS | 45.0% |
| AGGTAAGAATCCAGGGCATG+TGG | - | chr1.4:70941856-70941875 | MS.gene07159:CDS | 50.0% | |
| ATCGTTACGGAAAGAGACGG+AGG | + | chr1.4:70940868-70940887 | None:intergenic | 50.0% | |
| CATGGTGTTTCGTGGCCATA+AGG | - | chr1.4:70941088-70941107 | MS.gene07159:CDS | 50.0% | |
| GAAGGATTCGGGGAATGAGT+CGG | - | chr1.4:70941406-70941425 | MS.gene07159:CDS | 50.0% | |
| GCAAGGTGAGAAACCATCTG+AGG | - | chr1.4:70941733-70941752 | MS.gene07159:CDS | 50.0% | |
| GCACTGTCGAGACAGAGATT+CGG | - | chr1.4:70942101-70942120 | MS.gene07159:CDS | 50.0% | |
| GGAGAGGGAAGCTGAATTAG+CGG | + | chr1.4:70940784-70940803 | None:intergenic | 50.0% | |
| GGATGATTGCAACAGCTGGT+GGG | - | chr1.4:70941282-70941301 | MS.gene07159:CDS | 50.0% | |
| GGTGGAGGATACTGAGAAGA+AGG | - | chr1.4:70941673-70941692 | MS.gene07159:CDS | 50.0% | |
| GGTGGATGAGAAGGAAGTTG+GGG | - | chr1.4:70941616-70941635 | MS.gene07159:CDS | 50.0% | |
| GGTTAGAGGTGAGACCAACT+CGG | - | chr1.4:70941202-70941221 | MS.gene07159:CDS | 50.0% | |
| GTGGGAATGCGGTCAAGATT+TGG | - | chr1.4:70941300-70941319 | MS.gene07159:CDS | 50.0% | |
| GTTGTTTATTTGCCGGGTGG+TGG | - | chr1.4:70941260-70941279 | MS.gene07159:CDS | 50.0% | |
| TACTGAGGAAACTCCGGTCA+TGG | - | chr1.4:70941070-70941089 | MS.gene07159:CDS | 50.0% | |
| TAGATGTGGTGATTCGTCCC+CGG | - | chr1.4:70941118-70941137 | MS.gene07159:CDS | 50.0% | |
| TGGATTTGGGGAGAAGGTGA+TGG | + | chr1.4:70940745-70940764 | None:intergenic | 50.0% | |
| TGGGAGGCTTGTGTATTCCA+TGG | - | chr1.4:70941337-70941356 | MS.gene07159:CDS | 50.0% | |
| ! | AAAGGGTGGATTTGGGGAGA+AGG | + | chr1.4:70940751-70940770 | None:intergenic | 50.0% |
| ! | GCGAAGGAAAAGGGTGGATT+TGG | + | chr1.4:70940759-70940778 | None:intergenic | 50.0% |
| ! | GGAGAAGCTGGAACTGCTTT+TGG | - | chr1.4:70941943-70941962 | MS.gene07159:CDS | 50.0% |
| ! | GGTTGCTGTGATGGAGGAAT+TGG | - | chr1.4:70941877-70941896 | MS.gene07159:CDS | 50.0% |
| ! | TGAGTGAGGCTAGTTCGGTT+TGG | - | chr1.4:70941639-70941658 | MS.gene07159:CDS | 50.0% |
| ! | TGATCTAAGACGACGGAGAC+GGG | + | chr1.4:70940955-70940974 | None:intergenic | 50.0% |
| !! | TTGGGGAGAAGGTGATGGAA+GGG | + | chr1.4:70940740-70940759 | None:intergenic | 50.0% |
| !! | TTTGGGGAGAAGGTGATGGA+AGG | + | chr1.4:70940741-70940760 | None:intergenic | 50.0% |
| ACGGAAAGAGACGGAGGAGA+CGG | + | chr1.4:70940862-70940881 | None:intergenic | 55.0% | |
| ACTCCGGTCATGGTGTTTCG+TGG | - | chr1.4:70941080-70941099 | MS.gene07159:CDS | 55.0% | |
| AGGGCATGTGGTTGCTGTGA+TGG | - | chr1.4:70941868-70941887 | MS.gene07159:CDS | 55.0% | |
| ATCACAGCAACCACATGCCC+TGG | + | chr1.4:70941869-70941888 | None:intergenic | 55.0% | |
| ATTAGCGGCGGCGAAGGAAA+AGG | + | chr1.4:70940769-70940788 | None:intergenic | 55.0% | |
| GAAGGAAGTTGGGGTGAGTG+AGG | - | chr1.4:70941625-70941644 | MS.gene07159:CDS | 55.0% | |
| GAGGGAAGCTGAATTAGCGG+CGG | + | chr1.4:70940781-70940800 | None:intergenic | 55.0% | |
| GCATGTGGTTGCTGTGATGG+AGG | - | chr1.4:70941871-70941890 | MS.gene07159:CDS | 55.0% | |
| GCTCTTGTGTGCGTGTTGGA+AGG | - | chr1.4:70941836-70941855 | MS.gene07159:CDS | 55.0% | |
| GGGATGATTGCAACAGCTGG+TGG | - | chr1.4:70941281-70941300 | MS.gene07159:CDS | 55.0% | |
| GGTGGGATGATTGCAACAGC+TGG | - | chr1.4:70941278-70941297 | MS.gene07159:CDS | 55.0% | |
| GGTTTGGAGAATTAGGCCGG+TGG | - | chr1.4:70941655-70941674 | MS.gene07159:CDS | 55.0% | |
| GTTGCAATCATCCCACCACC+CGG | + | chr1.4:70941275-70941294 | None:intergenic | 55.0% | |
| TAACCCGGAGAGGTCAGAAG+CGG | + | chr1.4:70940904-70940923 | None:intergenic | 55.0% | |
| TGAGGCTCTTGTGTGCGTGT+TGG | - | chr1.4:70941832-70941851 | MS.gene07159:CDS | 55.0% | |
| TGCAACAGCTGGTGGGAATG+CGG | - | chr1.4:70941289-70941308 | MS.gene07159:CDS | 55.0% | |
| TGGCCACGAAACACCATGAC+CGG | + | chr1.4:70941086-70941105 | None:intergenic | 55.0% | |
| TGGGAGGATCGGGAAGGATT+CGG | - | chr1.4:70941394-70941413 | MS.gene07159:CDS | 55.0% | |
| TTAGCGGCGGCGAAGGAAAA+GGG | + | chr1.4:70940768-70940787 | None:intergenic | 55.0% | |
| TTGGAGAATTAGGCCGGTGG+AGG | - | chr1.4:70941658-70941677 | MS.gene07159:CDS | 55.0% | |
| TTGTGTTGGGAGGATCGGGA+AGG | - | chr1.4:70941388-70941407 | MS.gene07159:CDS | 55.0% | |
| ! | AGGTGAGACCAACTCGGTGA+TGG | - | chr1.4:70941208-70941227 | MS.gene07159:CDS | 55.0% |
| ! | CGAGGAGACGAGCATCGTTA+CGG | + | chr1.4:70940881-70940900 | None:intergenic | 55.0% |
| ! | TGGGGTGAGTGAGGCTAGTT+CGG | - | chr1.4:70941634-70941653 | MS.gene07159:CDS | 55.0% |
| !! | GGAGAAGGTGATGGAAGGGA+TGG | + | chr1.4:70940736-70940755 | None:intergenic | 55.0% |
| !! | GGGATTTGATTGGTGGTGGG+AGG | - | chr1.4:70941321-70941340 | MS.gene07159:CDS | 55.0% |
| !!! | CTGCGCCGCTTTTGTCTGTT+GGG | - | chr1.4:70941519-70941538 | MS.gene07159:CDS | 55.0% |
| AGAGACGGAGGAGACGGTGT+CGG | + | chr1.4:70940856-70940875 | None:intergenic | 60.0% | |
| AGCTGAATTAGCGGCGGCGA+AGG | + | chr1.4:70940775-70940794 | None:intergenic | 60.0% | |
| CCAACAGACAAAAGCGGCGC+AGG | + | chr1.4:70941521-70941540 | None:intergenic | 60.0% | |
| GGAGGATCGGGAAGGATTCG+GGG | - | chr1.4:70941396-70941415 | MS.gene07159:CDS | 60.0% | |
| GGGAGGATCGGGAAGGATTC+GGG | - | chr1.4:70941395-70941414 | MS.gene07159:CDS | 60.0% | |
| GTCGGAGAAGGAGGAGATGG+TGG | + | chr1.4:70940838-70940857 | None:intergenic | 60.0% | |
| ! | GGAGAAGGAGGAGATGGTGG+CGG | + | chr1.4:70940835-70940854 | None:intergenic | 60.0% |
| ! | GGTGTCGGAGAAGGAGGAGA+TGG | + | chr1.4:70940841-70940860 | None:intergenic | 60.0% |
| !! | AGGAGGAGATGGTGGCGGTT+TGG | + | chr1.4:70940830-70940849 | None:intergenic | 60.0% |
| !!! | CCTGCGCCGCTTTTGTCTGT+TGG | - | chr1.4:70941518-70941537 | MS.gene07159:CDS | 60.0% |
| CTCGCCGCTTCTGACCTCTC+CGG | - | chr1.4:70940897-70940916 | MS.gene07159:CDS | 65.0% | |
| TCGCCGCTTCTGACCTCTCC+GGG | - | chr1.4:70940898-70940917 | MS.gene07159:CDS | 65.0% | |
| ! | GGAGACGGTGTCGGAGAAGG+AGG | + | chr1.4:70940847-70940866 | None:intergenic | 65.0% |
| ! | GGAGGAGACGGTGTCGGAGA+AGG | + | chr1.4:70940850-70940869 | None:intergenic | 65.0% |
| CGGAGAGGTCAGAAGCGGCG+AGG | + | chr1.4:70940899-70940918 | None:intergenic | 70.0% | |
| GCGGCGGCGAAGGAAAAGGG+TGG | + | chr1.4:70940765-70940784 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 70940600 | 70942192 | 70940600 | ID=MS.gene07159 |
| chr1.4 | mRNA | 70940600 | 70942192 | 70940600 | ID=MS.gene07159.t1;Parent=MS.gene07159 |
| chr1.4 | exon | 70940600 | 70942192 | 70940600 | ID=MS.gene07159.t1.exon1;Parent=MS.gene07159.t1 |
| chr1.4 | CDS | 70940600 | 70942192 | 70940600 | ID=cds.MS.gene07159.t1;Parent=MS.gene07159.t1 |
| Gene Sequence |
| Protein sequence |