AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36784

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36784.t1 MTR_6g016470 90.972 1019 89 3 1 1016 1 1019 0.0 1875
MS.gene36784.t1 MTR_7g095710 67.958 955 291 7 71 1016 104 1052 0.0 1253
MS.gene36784.t1 MTR_8g013780 95.462 573 25 1 447 1018 1 573 0.0 1125
MS.gene36784.t1 MTR_2g038310 56.360 967 397 9 52 1008 123 1074 0.0 1031
MS.gene36784.t1 MTR_4g008170 56.437 971 394 12 50 1008 133 1086 0.0 1020
MS.gene36784.t1 MTR_4g008170 55.816 980 393 14 50 1008 133 1093 0.0 1002
MS.gene36784.t1 MTR_2g038310 56.836 885 357 9 52 926 123 992 0.0 931
MS.gene36784.t1 MTR_4g008650 47.767 963 459 15 55 1003 79 1011 0.0 859
MS.gene36784.t1 MTR_8g013810 93.435 457 24 1 1 457 1 451 0.0 858
MS.gene36784.t1 MTR_8g090125 47.479 952 458 16 69 1006 49 972 0.0 843
MS.gene36784.t1 MTR_4g096990 48.276 957 461 14 56 1003 81 1012 0.0 816
MS.gene36784.t1 MTR_5g015590 47.482 973 471 16 41 1003 72 1014 0.0 803
MS.gene36784.t1 MTR_3g103070 46.354 960 479 12 55 1003 82 1016 0.0 798
MS.gene36784.t1 MTR_4g043690 45.960 953 473 14 69 1006 96 1021 0.0 796
MS.gene36784.t1 MTR_0005s0140 45.960 953 473 14 69 1006 11 936 0.0 796
MS.gene36784.t1 MTR_3g103070 48.608 862 410 11 153 1003 1 840 0.0 753
MS.gene36784.t1 MTR_5g015590 47.991 896 426 16 41 926 72 937 0.0 736
MS.gene36784.t1 MTR_2g105830 52.957 761 340 10 40 793 106 855 0.0 731
MS.gene36784.t1 MTR_8g446010 41.561 948 512 15 69 1003 49 967 0.0 685
MS.gene36784.t1 MTR_8g045070 40.717 948 497 15 69 1003 49 944 0.0 668
MS.gene36784.t1 MTR_4g008650 46.752 785 378 14 55 829 79 833 0.0 667
MS.gene36784.t1 MTR_5g015590 46.415 795 390 15 41 829 72 836 0.0 614
MS.gene36784.t1 MTR_5g015590 44.790 739 372 15 41 773 72 780 4.10e-175 531
MS.gene36784.t1 MTR_5g097270 33.295 874 526 16 151 1001 165 1004 1.53e-137 440
MS.gene36784.t1 MTR_4g014480 30.564 1011 612 23 19 1003 3 949 1.04e-127 412
MS.gene36784.t1 MTR_7g100110 32.688 878 455 28 101 880 38 877 2.77e-106 357
MS.gene36784.t1 MTR_8g027160 31.766 872 472 25 105 885 30 869 3.77e-96 325
MS.gene36784.t1 MTR_8g027160 31.688 871 472 25 105 884 30 868 1.05e-94 324
MS.gene36784.t1 MTR_2g105690 61.333 225 82 1 789 1008 19 243 1.77e-92 295
MS.gene36784.t1 MTR_3g103270 30.325 831 483 19 124 889 65 864 8.85e-88 304
MS.gene36784.t1 MTR_8g027160 30.475 758 405 23 105 772 30 755 1.03e-68 245
MS.gene36784.t1 MTR_8g027160 30.303 759 407 23 104 772 29 755 1.77e-68 245
MS.gene36784.t1 MTR_8g089870 24.769 759 466 21 153 880 69 753 1.83e-47 184
MS.gene36784.t1 MTR_7g117500 23.268 924 568 32 118 1018 46 851 3.49e-47 183
MS.gene36784.t1 MTR_2g036650 23.663 748 466 18 77 815 11 662 8.18e-47 182
MS.gene36784.t1 MTR_4g116950 23.169 751 477 21 71 815 1 657 1.06e-46 182
MS.gene36784.t1 MTR_4g127710 23.666 731 454 22 94 815 24 659 1.81e-46 181
MS.gene36784.t1 MTR_4g127710 23.699 730 455 22 94 815 24 659 2.54e-46 181
MS.gene36784.t1 MTR_2g449840 22.830 749 479 21 80 823 10 664 9.06e-45 175
MS.gene36784.t1 MTR_3g108800 23.823 701 440 18 122 815 43 656 1.17e-44 175
MS.gene36784.t1 MTR_3g108800 25.083 602 366 15 218 815 135 655 1.42e-44 175
MS.gene36784.t1 MTR_1g009760 23.496 698 446 17 122 815 46 659 3.05e-44 173
MS.gene36784.t1 MTR_1g009760 23.395 701 443 17 122 815 43 656 3.79e-44 174
MS.gene36784.t1 MTR_7g117500 22.944 924 560 33 118 1018 46 840 1.52e-43 172
MS.gene36784.t1 MTR_6g011310 24.302 609 377 18 218 823 138 665 2.54e-43 171
MS.gene36784.t1 MTR_2g104860 25.162 616 363 18 218 823 134 661 6.46e-43 170
MS.gene36784.t1 MTR_4g107500 24.217 607 380 17 218 823 140 667 1.17e-42 169
MS.gene36784.t1 MTR_8g063880 24.374 599 374 16 218 815 136 656 2.34e-42 168
MS.gene36784.t1 MTR_6g011310 24.631 609 370 19 218 823 138 660 1.03e-41 166
MS.gene36784.t1 MTR_1g009720 22.654 746 477 20 77 815 4 656 1.14e-41 166
MS.gene36784.t1 MTR_8g006790 23.394 607 384 17 218 823 144 670 4.16e-38 154
MS.gene36784.t1 MTR_5g052190 73.750 80 21 0 520 599 279 358 7.16e-30 128
MS.gene36784.t1 MTR_4g094695 24.185 583 325 19 243 818 465 937 2.32e-23 107
MS.gene36784.t1 MTR_3g097560 24.012 683 385 25 174 778 217 843 7.77e-23 105
MS.gene36784.t1 MTR_2g090610 21.066 788 459 22 211 857 98 863 3.44e-19 94.4
MS.gene36784.t1 MTR_2g035840 30.808 198 103 4 623 820 775 938 4.24e-19 94.0
MS.gene36784.t1 MTR_2g090610 21.066 788 459 22 211 857 98 863 5.84e-19 93.2
MS.gene36784.t1 MTR_8g079250 29.508 183 97 3 638 820 788 938 6.33e-17 86.7
MS.gene36784.t1 MTR_4g008640 46.316 95 45 2 585 679 82 170 6.68e-17 80.1
MS.gene36784.t1 MTR_5g010420 30.000 190 97 5 611 797 750 906 1.55e-16 85.5
MS.gene36784.t1 MTR_8g012390 29.858 211 108 5 629 838 751 922 7.85e-16 83.2
MS.gene36784.t1 MTR_4g112430 23.733 434 238 17 500 854 555 974 8.22e-15 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36784.t1 AT3G22910 68.043 1017 297 11 12 1017 17 1016 0.0 1316
MS.gene36784.t1 AT3G63380 65.672 1005 309 9 28 1012 27 1015 0.0 1272
MS.gene36784.t1 AT4G29900 57.024 961 388 9 69 1016 114 1062 0.0 1067
MS.gene36784.t1 AT4G29900 57.024 961 388 9 69 1016 114 1062 0.0 1067
MS.gene36784.t1 AT5G57110 56.341 962 401 8 64 1016 109 1060 0.0 1053
MS.gene36784.t1 AT5G57110 56.341 962 401 8 64 1016 109 1060 0.0 1053
MS.gene36784.t1 AT5G57110 56.341 962 401 8 64 1016 109 1060 0.0 1053
MS.gene36784.t1 AT3G21180 55.785 968 400 12 65 1016 124 1079 0.0 1014
MS.gene36784.t1 AT3G57330 47.330 955 467 12 56 1003 25 950 0.0 856
MS.gene36784.t1 AT3G57330 47.330 955 467 12 56 1003 80 1005 0.0 856
MS.gene36784.t1 AT2G41560 44.016 1011 520 14 6 1006 37 1011 0.0 833
MS.gene36784.t1 AT2G41560 46.162 938 466 13 79 1006 1 909 0.0 822
MS.gene36784.t1 AT2G41560 46.162 938 466 13 79 1006 1 909 0.0 822
MS.gene36784.t1 AT2G41560 46.162 938 466 13 79 1006 1 909 0.0 822
MS.gene36784.t1 AT1G27770 46.660 958 474 13 58 1003 85 1017 0.0 810
MS.gene36784.t1 AT1G27770 46.660 958 474 13 58 1003 85 1017 0.0 810
MS.gene36784.t1 AT1G27770 46.555 958 475 12 58 1003 22 954 0.0 808
MS.gene36784.t1 AT4G37640 46.875 960 475 14 55 1003 79 1014 0.0 786
MS.gene36784.t1 AT2G22950 46.979 960 475 14 55 1003 79 1015 0.0 782
MS.gene36784.t1 AT5G53010 38.200 911 481 21 69 950 140 997 1.64e-178 548
MS.gene36784.t1 AT5G53010 37.270 652 389 12 62 711 133 766 8.59e-125 399
MS.gene36784.t1 AT1G27770 40.275 581 317 10 55 621 82 646 1.14e-117 384
MS.gene36784.t1 AT1G27770 57.929 309 125 2 700 1003 635 943 1.28e-109 363
MS.gene36784.t1 AT1G07810 33.811 837 458 27 122 884 54 868 1.14e-107 360
MS.gene36784.t1 AT1G07670 33.811 837 458 27 122 884 54 868 1.69e-107 360
MS.gene36784.t1 AT1G07670 33.811 837 458 27 122 884 54 868 1.69e-107 360
MS.gene36784.t1 AT4G00900 33.333 858 463 26 94 867 14 846 4.10e-103 347
MS.gene36784.t1 AT4G00900 33.333 858 463 26 94 867 14 846 4.10e-103 347
MS.gene36784.t1 AT1G10130 28.410 975 553 25 122 994 32 963 1.09e-88 306
MS.gene36784.t1 AT3G60330 24.059 744 447 27 94 823 22 661 4.59e-46 180
MS.gene36784.t1 AT3G60330 24.059 744 447 27 94 823 22 661 4.59e-46 180
MS.gene36784.t1 AT3G60330 23.925 744 448 27 94 823 22 661 1.15e-45 179
MS.gene36784.t1 AT3G60330 23.925 744 448 27 94 823 22 661 1.15e-45 179
MS.gene36784.t1 AT3G42640 24.111 759 461 27 78 823 8 664 2.29e-45 177
MS.gene36784.t1 AT1G80660 24.473 617 366 18 218 823 10 537 3.45e-45 176
MS.gene36784.t1 AT1G80660 24.473 617 366 18 218 823 139 666 3.64e-45 177
MS.gene36784.t1 AT1G80660 24.473 617 366 18 218 823 139 666 3.70e-45 177
MS.gene36784.t1 AT1G80660 24.473 617 366 18 218 823 139 666 3.76e-45 177
MS.gene36784.t1 AT2G24520 25.801 593 357 17 225 815 188 699 4.41e-45 177
MS.gene36784.t1 AT2G24520 25.801 593 357 17 225 815 125 636 4.54e-45 176
MS.gene36784.t1 AT2G24520 25.801 593 357 17 225 815 125 636 4.54e-45 176
MS.gene36784.t1 AT2G07560 24.000 775 487 26 78 846 8 686 7.04e-45 176
MS.gene36784.t1 AT3G47950 23.994 621 364 20 218 823 142 669 2.54e-43 171
MS.gene36784.t1 AT3G47950 23.994 621 364 20 218 823 142 669 2.54e-43 171
MS.gene36784.t1 AT5G62670 23.849 608 381 16 218 823 138 665 3.15e-43 171
MS.gene36784.t1 AT4G30190 24.564 631 394 17 218 846 134 684 1.38e-42 169
MS.gene36784.t1 AT5G57350 24.338 604 368 17 218 815 135 655 3.57e-42 167
MS.gene36784.t1 AT5G57350 24.338 604 368 17 218 815 135 655 3.57e-42 167
MS.gene36784.t1 AT5G57350 24.338 604 368 17 218 815 135 655 3.57e-42 167
MS.gene36784.t1 AT2G18960 24.564 631 394 18 218 846 70 620 3.86e-42 167
MS.gene36784.t1 AT2G18960 24.564 631 394 18 218 846 70 620 3.86e-42 167
MS.gene36784.t1 AT1G17260 24.507 608 361 15 218 815 142 661 8.30e-42 166
MS.gene36784.t1 AT2G18960 24.564 631 394 18 218 846 134 684 8.80e-42 166
MS.gene36784.t1 AT4G30190 23.529 663 394 20 218 846 134 717 8.81e-39 157
MS.gene36784.t1 AT5G57350 24.480 433 273 11 385 815 13 393 6.65e-30 127
MS.gene36784.t1 AT2G24520 24.537 432 274 11 385 815 13 393 5.05e-29 124
MS.gene36784.t1 AT5G23630 23.169 669 381 21 174 765 217 829 4.30e-22 103
MS.gene36784.t1 AT1G63440 31.148 183 94 2 638 820 787 937 2.50e-19 94.7
MS.gene36784.t1 AT5G44790 31.683 202 105 4 619 820 780 948 8.81e-19 92.8
MS.gene36784.t1 AT4G11730 23.235 340 215 13 122 454 45 345 2.15e-17 88.2
MS.gene36784.t1 AT4G30110 28.302 212 112 5 635 846 508 679 8.33e-15 79.7
MS.gene36784.t1 AT4G30110 28.302 212 112 5 635 846 508 679 8.33e-15 79.7

Find 166 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAACCATCATGGTATT+TGG 0.149166 8.2:-79184326 None:intergenic
TAACAGCAGTTCAATTATTA+TGG 0.156185 8.2:+79185254 MS.gene36784:CDS
TTATTAACTCTTCAGTTTAA+AGG 0.186479 8.2:+79185436 MS.gene36784:CDS
TCATGACAATCTATTGTTCT+AGG 0.188399 8.2:+79182577 MS.gene36784:CDS
AATAATTGAACTGCTGTTAA+TGG 0.212762 8.2:-79185250 None:intergenic
TGAGTTTAATGCAAGGAAAT+TGG 0.225227 8.2:+79185537 MS.gene36784:CDS
TCTTATATTGTTTGTGTTGT+TGG 0.228608 8.2:-79182541 None:intergenic
ATTATGGGTGAATTTGATTA+TGG 0.241738 8.2:+79185270 MS.gene36784:CDS
CTATAGTAACAGTTATAAAT+TGG 0.242031 8.2:+79185119 MS.gene36784:CDS
TTTAACAATTCTTATTCTTT+TGG 0.264806 8.2:+79182926 MS.gene36784:CDS
AATACTATCTTGGGCTGTTT+TGG 0.272622 8.2:+79184138 MS.gene36784:CDS
ACTTTCTGCATGTGAGACTA+TGG 0.281744 8.2:+79183751 MS.gene36784:CDS
AAAACCTACTAAGGATTTAA+TGG 0.285321 8.2:+79185324 MS.gene36784:CDS
TTTGGAATTGAAAATGGATA+TGG 0.303373 8.2:+79184156 MS.gene36784:CDS
CAATGATATTCAAATTGATT+TGG 0.308945 8.2:+79183112 MS.gene36784:CDS
GGTGTTCACAAATTGAATTC+AGG 0.308966 8.2:+79184070 MS.gene36784:CDS
AAATGAAGGTGACAAAGTTT+TGG 0.310296 8.2:+79183951 MS.gene36784:CDS
GTTATCAGTCTTCGTGTTCC+CGG 0.311426 8.2:-79183543 None:intergenic
GAGTTAATAAAATTACTATT+TGG 0.311758 8.2:-79185423 None:intergenic
GTTTCATTTGTGTCCTGATT+AGG 0.317439 8.2:-79184821 None:intergenic
TTCGTCAATGTCGTTGCTTA+TGG 0.324687 8.2:-79183414 None:intergenic
CTTTCCAATGTGAAACAGTT+TGG 0.327124 8.2:-79184273 None:intergenic
TCAAATAGTACCTGTCTTAT+CGG 0.329348 8.2:-79183795 None:intergenic
CAAATTTCAACATGGATTCA+TGG 0.334533 8.2:-79184366 None:intergenic
GCTGCTGTTTCTTGGCCAAT+TGG 0.334729 8.2:+79185718 MS.gene36784:CDS
GCTACTCTTTCACTTGGCTT+TGG 0.339406 8.2:+79182954 MS.gene36784:CDS
GTTAGGACTTGTCGGCATTA+AGG 0.342087 8.2:+79184519 MS.gene36784:CDS
CTTAAAACTAACGTTGAGTT+TGG 0.343232 8.2:+79182780 MS.gene36784:CDS
TTGATCAATTGAAGAACATA+TGG 0.343534 8.2:-79184019 None:intergenic
GACAATGGTTTAACATTGTT+AGG 0.351609 8.2:+79184502 MS.gene36784:CDS
GTTCAATGCTTAAAAGAAAA+AGG 0.354812 8.2:+79184953 MS.gene36784:CDS
TATAGTAACAGTTATAAATT+GGG 0.361053 8.2:+79185120 MS.gene36784:CDS
CACATAATGTTAGTTATAAG+AGG 0.361954 8.2:-79185373 None:intergenic
CTAATACTGAGAGGTTGAAT+TGG 0.365165 8.2:+79185668 MS.gene36784:CDS
GGTCACGTAGTTGCTGTAAC+TGG 0.372819 8.2:+79184974 MS.gene36784:CDS
CGGAATTCTTCAACCTAATC+AGG 0.375327 8.2:+79184808 MS.gene36784:CDS
AGCTGATATTGGACTTTCAA+TGG 0.376166 8.2:+79185030 MS.gene36784:CDS
CTCAATCGGAAAGGTTGGTT+TGG 0.386409 8.2:+79183475 MS.gene36784:CDS
AACAGCAGTTCAATTATTAT+GGG 0.388612 8.2:+79185255 MS.gene36784:CDS
GATGTGATGAATGCAGTTAT+TGG 0.388736 8.2:+79183605 MS.gene36784:CDS
AATTTGATTATGGATACATT+AGG 0.389466 8.2:+79185280 MS.gene36784:CDS
TTGTTTGTGTTGTTGGTGTT+TGG 0.395216 8.2:-79182534 None:intergenic
TCAATTCGACAACAAGTGTT+TGG 0.401723 8.2:+79182837 MS.gene36784:CDS
GATGTTGTTTGTTTGAAGAT+TGG 0.403237 8.2:+79183185 MS.gene36784:CDS
GCCGATGGATTGTTCCTAGA+TGG 0.404691 8.2:+79183221 MS.gene36784:CDS
TTATCCATTAAATCCTTAGT+AGG 0.405284 8.2:-79185328 None:intergenic
AGAGGCTTTGTTCTACCAAC+AGG 0.415046 8.2:-79185355 None:intergenic
GCATTGAAAGAAGCTGATAT+TGG 0.419377 8.2:+79185019 MS.gene36784:CDS
CATGACAATCTATTGTTCTA+GGG 0.426996 8.2:+79182578 MS.gene36784:CDS
CAAACCAACCTTTCCGATTG+AGG 0.434963 8.2:-79183474 None:intergenic
GGACTTTCAATGGGAATTCA+AGG 0.435159 8.2:+79185040 MS.gene36784:CDS
GTGAATGTCAAAATGATTAC+AGG 0.438056 8.2:+79184595 MS.gene36784:CDS
ACCATTAGAAGTTTATCAAA+AGG 0.438596 8.2:-79184932 None:intergenic
TATGAGAGTTTCTTGATCAA+TGG 0.439612 8.2:-79182688 None:intergenic
AGAGGTTGAATTGGAGAGAG+TGG 0.441904 8.2:+79185677 MS.gene36784:CDS
GTTCTTCAATTGATCAAAGA+AGG 0.446882 8.2:+79184025 MS.gene36784:CDS
TCAATATTTGATATTGTTGT+TGG 0.451599 8.2:+79183161 MS.gene36784:CDS
CAGAAACATGGTGGAGTTGA+AGG 0.451952 8.2:+79182744 MS.gene36784:CDS
GTCGTTGTTGCTATCCCTGA+GGG 0.454074 8.2:+79183653 MS.gene36784:CDS
AACTTCACAACAAAACCAAT+TGG 0.455892 8.2:-79185733 None:intergenic
TCAAAATTTCACAACCATCA+TGG 0.460213 8.2:-79184333 None:intergenic
GAGAAGAAGAATGTGTTTGA+AGG 0.463945 8.2:+79185559 MS.gene36784:CDS
TGAAAGCATTATTCAAGGTA+TGG 0.464548 8.2:+79184387 MS.gene36784:CDS
AAATTTGAAAGCATTATTCA+AGG 0.465165 8.2:+79184382 MS.gene36784:CDS
TTTGTCGCGGCGGTTTCAGC+AGG 0.465185 8.2:+79185220 MS.gene36784:CDS
AGTGTCAATGTGACAGCTAA+TGG 0.468246 8.2:-79183680 None:intergenic
AGAGAGTGGATTGTTTGTAT+TGG 0.469398 8.2:+79185691 MS.gene36784:CDS
TCAACCGCTGTCTTCACTCC+TGG 0.474177 8.2:-79184553 None:intergenic
TATGGATACATTAGGTGCAT+TGG 0.476382 8.2:+79185288 MS.gene36784:CDS
GCTGATATTGGACTTTCAAT+GGG 0.477956 8.2:+79185031 MS.gene36784:CDS
ACAGCTAATGGCAAACCCTC+AGG 0.482999 8.2:-79183668 None:intergenic
GAATATGCACCAACTTCCAT+TGG 0.484480 8.2:-79183986 None:intergenic
TTAACATTGTTAGGACTTGT+CGG 0.492019 8.2:+79184511 MS.gene36784:CDS
AAAGTTACAGACGAAGAGCT+TGG 0.493916 8.2:+79184448 MS.gene36784:CDS
AATCAACCACAGTGAAAGAT+GGG 0.494172 8.2:-79182644 None:intergenic
CTGTTGATTCGATATTTCAC+CGG 0.495373 8.2:+79183524 MS.gene36784:CDS
GTTTGTGCTACTCTTTCACT+TGG 0.496780 8.2:+79182948 MS.gene36784:CDS
AAATCAACCACAGTGAAAGA+TGG 0.497406 8.2:-79182645 None:intergenic
GGTTTAGAACCAATGGAAGT+TGG 0.498433 8.2:+79183977 MS.gene36784:CDS
GGAGTTGCTCTAAATACTAC+TGG 0.498528 8.2:+79184046 MS.gene36784:CDS
CTCTCAACGAATGTCCATCT+AGG 0.502870 8.2:-79183235 None:intergenic
GTTGATGAATCGAGCATGAC+CGG 0.505360 8.2:+79183257 MS.gene36784:CDS
TCGAAGTGGGCGCCGACAAA+AGG 0.507237 8.2:+79183136 MS.gene36784:CDS
CGGTTGGTATGAACACAACA+TGG 0.507879 8.2:+79183375 MS.gene36784:CDS
AATAAACTAACATCCTCAAT+CGG 0.510354 8.2:+79183461 MS.gene36784:CDS
GTCAAAGAAGGTTGGTATGA+TGG 0.512824 8.2:+79182993 MS.gene36784:CDS
AAGAAACTCCTTTGCAAACA+AGG 0.516856 8.2:+79183435 MS.gene36784:CDS
GTCTTCACTCCTGGACGACA+TGG 0.518276 8.2:-79184544 None:intergenic
GGGAATTGTTGGTGTGACAT+TGG 0.521518 8.2:+79185606 MS.gene36784:CDS
GTGGTTCAAGTTTGTGAACA+AGG 0.521853 8.2:-79182490 None:intergenic
AGTAAAGGTTTGTCTGAGAC+TGG 0.521937 8.2:-79185760 None:intergenic
ATATCAGCTTCTTTCAATGC+CGG 0.524112 8.2:-79185016 None:intergenic
AGAACAATAGATTGTCATGA+AGG 0.524303 8.2:-79182574 None:intergenic
CTTCACGCACGAAGAGAGGT+TGG 0.525168 8.2:+79184871 MS.gene36784:CDS
CTCTTATAACTAACATTATG+TGG 0.531696 8.2:+79185374 MS.gene36784:CDS
ACAACCAAACTGTTTCACAT+TGG 0.535219 8.2:+79184269 MS.gene36784:CDS
GCAACTTCACGCACGAAGAG+AGG 0.537170 8.2:+79184867 MS.gene36784:CDS
AACTCAAAGAAGAAAAGAAG+TGG 0.537966 8.2:+79184223 MS.gene36784:CDS
AAAGAGCATGGAGTCAAAGA+AGG 0.538580 8.2:+79182981 MS.gene36784:CDS
AGAAGAAGAATGTGTTTGAA+GGG 0.540107 8.2:+79185560 MS.gene36784:CDS
AAAATGCTCGTTACATCGGT+TGG 0.541310 8.2:+79183359 MS.gene36784:CDS
ATTGGTGCTTCAAGTTGTGA+TGG 0.541508 8.2:+79185624 MS.gene36784:CDS
GGCTTTGGAATCAAAGAGCA+TGG 0.545764 8.2:+79182969 MS.gene36784:CDS
TTGGCTTGGTTTAGAACCAA+TGG 0.546364 8.2:+79183970 MS.gene36784:CDS
ACAACACAAACAATATAAGA+TGG 0.547366 8.2:+79182544 MS.gene36784:CDS
ACATCCTCAATCGGAAAGGT+TGG 0.547400 8.2:+79183470 MS.gene36784:CDS
ACTCACTTTGAATCAAATGA+AGG 0.553950 8.2:+79183937 MS.gene36784:CDS
TTATTCAACCTTGTTTGCAA+AGG 0.556386 8.2:-79183443 None:intergenic
GTAGTTGCTGTAACTGGAGA+TGG 0.559458 8.2:+79184980 MS.gene36784:CDS
AGTTGAGAAAATCTCTGTGA+TGG 0.561269 8.2:+79184898 MS.gene36784:CDS
CTTTCTGCATGTGAGACTAT+GGG 0.561453 8.2:+79183752 MS.gene36784:CDS
ACAAATGAAACAGTGGTTGA+AGG 0.561818 8.2:+79184833 MS.gene36784:CDS
TTATTCAATGAAGAAAATGA+TGG 0.562067 8.2:+79183706 MS.gene36784:CDS
CAAATTGATTTGGTTCGAAG+TGG 0.562120 8.2:+79183122 MS.gene36784:CDS
ACAGACGAAGAGCTTGGAGA+TGG 0.562863 8.2:+79184454 MS.gene36784:CDS
TCCGGAACAAAAGTTGCCGA+TGG 0.563913 8.2:+79183329 MS.gene36784:CDS
TTGGAAAGGAGCAGCAGAGA+TGG 0.565912 8.2:+79184288 MS.gene36784:CDS
ATTAAGGATCCATGTCGTCC+AGG 0.566040 8.2:+79184535 MS.gene36784:CDS
AGCATGGAGTCAAAGAAGGT+TGG 0.566589 8.2:+79182985 MS.gene36784:CDS
TCTAGGAACAATCCATCGGC+TGG 0.567484 8.2:-79183218 None:intergenic
ACAATTTGCACCGATAAGAC+AGG 0.572673 8.2:+79183785 MS.gene36784:CDS
ATTTCAATTAACAGTGAATG+TGG 0.574758 8.2:+79185180 MS.gene36784:CDS
AAATTGATTTGGTTCGAAGT+GGG 0.582829 8.2:+79183123 MS.gene36784:CDS
TGTTGATTCGATATTTCACC+GGG 0.582880 8.2:+79183525 MS.gene36784:CDS
AAAGAAGGTTGGTATGATGG+TGG 0.584489 8.2:+79182996 MS.gene36784:CDS
AAATTCAAGAAATCAAGTAA+AGG 0.584542 8.2:-79185775 None:intergenic
TGTGAACAAGGGCATTGACA+TGG 0.585662 8.2:-79182478 None:intergenic
TGATCAATGGTAAAAGAATG+AGG 0.588924 8.2:-79182675 None:intergenic
CTCTACATGATCACTCTCAC+CGG 0.592082 8.2:-79183276 None:intergenic
GGGAACACGAAGACTGATAA+CGG 0.595313 8.2:+79183545 MS.gene36784:CDS
AGATGGAACAAATGATGCAC+CGG 0.596050 8.2:+79184997 MS.gene36784:CDS
AGGTGCATTGGCTCTCGCAA+CGG 0.600700 8.2:+79185300 MS.gene36784:CDS
GTTGAAGCTTGCCAACATGC+TGG 0.601597 8.2:+79184571 MS.gene36784:CDS
CAAACTGTTTCACATTGGAA+AGG 0.603341 8.2:+79184274 MS.gene36784:CDS
TGACATTCACACCAGCATGT+TGG 0.604962 8.2:-79184582 None:intergenic
TGGTTCAAGTTTGTGAACAA+GGG 0.619115 8.2:-79182489 None:intergenic
CAGCTAATGGCAAACCCTCA+GGG 0.620845 8.2:-79183667 None:intergenic
ACTAACATCCTCAATCGGAA+AGG 0.622770 8.2:+79183466 MS.gene36784:CDS
TCCATCTAGGAACAATCCAT+CGG 0.623925 8.2:-79183222 None:intergenic
TGTTTAATGAGTTTAATGCA+AGG 0.630387 8.2:+79185530 MS.gene36784:CDS
TGTCGTTGTTGCTATCCCTG+AGG 0.631694 8.2:+79183652 MS.gene36784:CDS
AGATGGAGAGACGAACAAGA+TGG 0.639024 8.2:+79184471 MS.gene36784:CDS
GGTGATCAAGTACCAGCCGA+TGG 0.639660 8.2:+79183206 MS.gene36784:CDS
GGTTGGTATGAACACAACAT+GGG 0.640345 8.2:+79183376 MS.gene36784:CDS
AATGCTTTCAAATTTCAACA+TGG 0.641477 8.2:-79184374 None:intergenic
ATGTGTTCCAAATACCATGA+TGG 0.646032 8.2:+79184319 MS.gene36784:CDS
TTAATGGATAAAGAACCTGT+TGG 0.647999 8.2:+79185340 MS.gene36784:CDS
ATAGTAACAGTTATAAATTG+GGG 0.650143 8.2:+79185121 MS.gene36784:CDS
AAGATGGTGGTAAAAGACAA+TGG 0.652183 8.2:+79184487 MS.gene36784:CDS
AGAAGTTTGCTAATACTGAG+AGG 0.658673 8.2:+79185659 MS.gene36784:CDS
TTATAACTAACATTATGTGG+AGG 0.663994 8.2:+79185377 MS.gene36784:CDS
TGGAGAGACGAACAAGATGG+TGG 0.667020 8.2:+79184474 MS.gene36784:CDS
ATTGACACACTTCAGAAACA+TGG 0.669798 8.2:+79182732 MS.gene36784:CDS
ACCTACCCCATCTTTCACTG+TGG 0.672694 8.2:+79182638 MS.gene36784:CDS
TCAGGACACAAATGAAACAG+TGG 0.678564 8.2:+79184826 MS.gene36784:CDS
AATGATGGCTGATCAAGCAA+TGG 0.680846 8.2:+79183721 MS.gene36784:CDS
ATCAACCACAGTGAAAGATG+GGG 0.694996 8.2:-79182643 None:intergenic
AACGGAGTTAGAGAGTTCAA+CGG 0.695815 8.2:+79183563 MS.gene36784:CDS
GTTGCTCTAAATACTACTGG+TGG 0.704322 8.2:+79184049 MS.gene36784:CDS
GTTGGTATGAACACAACATG+GGG 0.705560 8.2:+79183377 MS.gene36784:CDS
AAAGCTATAGCATTTGAATG+CGG 0.720955 8.2:+79184788 MS.gene36784:CDS
ACCACAGTGAAAGATGGGGT+AGG 0.724166 8.2:-79182639 None:intergenic
GACACACTTCAGAAACATGG+TGG 0.728054 8.2:+79182735 MS.gene36784:CDS
ATCGAATCAACAGAACAACA+AGG 0.735048 8.2:-79183514 None:intergenic
CATTGAGAAGTGTCTCAATG+TGG 0.745193 8.2:-79182509 None:intergenic
TCGTCCAGGAGTGAAGACAG+CGG 0.774137 8.2:+79184549 MS.gene36784:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAGTTAATAAAATTACTATT+TGG - chr8.2:79185426-79185445 None:intergenic 15.0%
!! TATAGTAACAGTTATAAATT+GGG + chr8.2:79185120-79185139 MS.gene36784:CDS 15.0%
!!! TTTAACAATTCTTATTCTTT+TGG + chr8.2:79182926-79182945 MS.gene36784:CDS 15.0%
!! AAATTCAAGAAATCAAGTAA+AGG - chr8.2:79185778-79185797 None:intergenic 20.0%
!! AATTTGATTATGGATACATT+AGG + chr8.2:79185280-79185299 MS.gene36784:CDS 20.0%
!! ATAGTAACAGTTATAAATTG+GGG + chr8.2:79185121-79185140 MS.gene36784:CDS 20.0%
!! CAATGATATTCAAATTGATT+TGG + chr8.2:79183112-79183131 MS.gene36784:CDS 20.0%
!! CTATAGTAACAGTTATAAAT+TGG + chr8.2:79185119-79185138 MS.gene36784:CDS 20.0%
!! TCAATATTTGATATTGTTGT+TGG + chr8.2:79183161-79183180 MS.gene36784:CDS 20.0%
!! TGGTTAATTAACAATTAGTT+AGG - chr8.2:79184722-79184741 None:intergenic 20.0%
!! TTATTAACTCTTCAGTTTAA+AGG + chr8.2:79185436-79185455 MS.gene36784:CDS 20.0%
!! TTATTCAATGAAGAAAATGA+TGG + chr8.2:79183706-79183725 MS.gene36784:CDS 20.0%
!!! AAATTTGAAAGCATTATTCA+AGG + chr8.2:79184382-79184401 MS.gene36784:CDS 20.0%
!!! TACTTGATTTCTTGAATTTT+AGG + chr8.2:79185779-79185798 MS.gene36784:CDS 20.0%
! AAAACCTACTAAGGATTTAA+TGG + chr8.2:79185324-79185343 MS.gene36784:CDS 25.0%
! AACAGCAGTTCAATTATTAT+GGG + chr8.2:79185255-79185274 MS.gene36784:CDS 25.0%
! AATAAACTAACATCCTCAAT+CGG + chr8.2:79183461-79183480 MS.gene36784:CDS 25.0%
! AATAATTGAACTGCTGTTAA+TGG - chr8.2:79185253-79185272 None:intergenic 25.0%
! AATGCTTTCAAATTTCAACA+TGG - chr8.2:79184377-79184396 None:intergenic 25.0%
! ACAACACAAACAATATAAGA+TGG + chr8.2:79182544-79182563 MS.gene36784:CDS 25.0%
! ACCATTAGAAGTTTATCAAA+AGG - chr8.2:79184935-79184954 None:intergenic 25.0%
! AGAAAAAGCAATACTATCTT+GGG + chr8.2:79184129-79184148 MS.gene36784:CDS 25.0%
! ATTATGGGTGAATTTGATTA+TGG + chr8.2:79185270-79185289 MS.gene36784:CDS 25.0%
! ATTTCAATTAACAGTGAATG+TGG + chr8.2:79185180-79185199 MS.gene36784:CDS 25.0%
! CACATAATGTTAGTTATAAG+AGG - chr8.2:79185376-79185395 None:intergenic 25.0%
! CTCTTATAACTAACATTATG+TGG + chr8.2:79185374-79185393 MS.gene36784:CDS 25.0%
! GTTCAATGCTTAAAAGAAAA+AGG + chr8.2:79184953-79184972 MS.gene36784:CDS 25.0%
! TAACAGCAGTTCAATTATTA+TGG + chr8.2:79185254-79185273 MS.gene36784:CDS 25.0%
! TCAGAGATAAAGTATGTTAA+TGG - chr8.2:79184742-79184761 None:intergenic 25.0%
! TCTTATATTGTTTGTGTTGT+TGG - chr8.2:79182544-79182563 None:intergenic 25.0%
! TGTTTAATGAGTTTAATGCA+AGG + chr8.2:79185530-79185549 MS.gene36784:CDS 25.0%
! TTATAACTAACATTATGTGG+AGG + chr8.2:79185377-79185396 MS.gene36784:CDS 25.0%
! TTATCCATTAAATCCTTAGT+AGG - chr8.2:79185331-79185350 None:intergenic 25.0%
! TTGATCAATTGAAGAACATA+TGG - chr8.2:79184022-79184041 None:intergenic 25.0%
!! AAATGAAAGAAGCTTTTAGA+AGG - chr8.2:79182885-79182904 None:intergenic 25.0%
!! CAAATATTGATACCTTTTGT+CGG - chr8.2:79183151-79183170 None:intergenic 25.0%
!! TCCTTTTGATAAACTTCTAA+TGG + chr8.2:79184931-79184950 MS.gene36784:CDS 25.0%
!! TTGATCATGTGATTTGTAAT+AGG + chr8.2:79183911-79183930 MS.gene36784:intron 25.0%
!! TTTAAAGGTGAGACTATTTT+TGG + chr8.2:79185451-79185470 MS.gene36784:CDS 25.0%
!! TTTGGAATTGAAAATGGATA+TGG + chr8.2:79184156-79184175 MS.gene36784:CDS 25.0%
!!! ACTTGTTATAAATTTTGTCG+CGG + chr8.2:79185207-79185226 MS.gene36784:CDS 25.0%
!!! ATAGTATTGCTTTTTCTGTT+GGG - chr8.2:79184126-79184145 None:intergenic 25.0%
!!! ATTTAAGAGCAAGTTGTTTT+TGG + chr8.2:79185585-79185604 MS.gene36784:CDS 25.0%
!!! TTTAAGAGCAAGTTGTTTTT+GGG + chr8.2:79185586-79185605 MS.gene36784:CDS 25.0%
!!! TTTCATCCTTTTTTGTTTTC+CGG + chr8.2:79183311-79183330 MS.gene36784:CDS 25.0%
!!! TTTTGTTGTTGAAGCTTTTA+AGG + chr8.2:79182902-79182921 MS.gene36784:CDS 25.0%
AAAGCTATAGCATTTGAATG+CGG + chr8.2:79184788-79184807 MS.gene36784:CDS 30.0%
AACTCAAAGAAGAAAAGAAG+TGG + chr8.2:79184223-79184242 MS.gene36784:CDS 30.0%
AACTTCACAACAAAACCAAT+TGG - chr8.2:79185736-79185755 None:intergenic 30.0%
ACTCACTTTGAATCAAATGA+AGG + chr8.2:79183937-79183956 MS.gene36784:CDS 30.0%
AGAACAATAGATTGTCATGA+AGG - chr8.2:79182577-79182596 None:intergenic 30.0%
AGAAGAAGAATGTGTTTGAA+GGG + chr8.2:79185560-79185579 MS.gene36784:CDS 30.0%
CAAATTTCAACATGGATTCA+TGG - chr8.2:79184369-79184388 None:intergenic 30.0%
CAGAAAAAGCAATACTATCT+TGG + chr8.2:79184128-79184147 MS.gene36784:CDS 30.0%
CATGACAATCTATTGTTCTA+GGG + chr8.2:79182578-79182597 MS.gene36784:CDS 30.0%
CTTAAAACTAACGTTGAGTT+TGG + chr8.2:79182780-79182799 MS.gene36784:CDS 30.0%
GACAATGGTTTAACATTGTT+AGG + chr8.2:79184502-79184521 MS.gene36784:CDS 30.0%
GTGAATGTCAAAATGATTAC+AGG + chr8.2:79184595-79184614 MS.gene36784:CDS 30.0%
GTTCTTCAATTGATCAAAGA+AGG + chr8.2:79184025-79184044 MS.gene36784:CDS 30.0%
TATGAGAGTTTCTTGATCAA+TGG - chr8.2:79182691-79182710 None:intergenic 30.0%
TCAAAATTTCACAACCATCA+TGG - chr8.2:79184336-79184355 None:intergenic 30.0%
TCAAATAGTACCTGTCTTAT+CGG - chr8.2:79183798-79183817 None:intergenic 30.0%
TCATGACAATCTATTGTTCT+AGG + chr8.2:79182577-79182596 MS.gene36784:CDS 30.0%
TGAGTTTAATGCAAGGAAAT+TGG + chr8.2:79185537-79185556 MS.gene36784:CDS 30.0%
TGATCAATGGTAAAAGAATG+AGG - chr8.2:79182678-79182697 None:intergenic 30.0%
TTAACATTGTTAGGACTTGT+CGG + chr8.2:79184511-79184530 MS.gene36784:CDS 30.0%
TTTGTTCCGGAAAACAAAAA+AGG - chr8.2:79183320-79183339 None:intergenic 30.0%
! AAATGAAGGTGACAAAGTTT+TGG + chr8.2:79183951-79183970 MS.gene36784:CDS 30.0%
! GATGTTGTTTGTTTGAAGAT+TGG + chr8.2:79183185-79183204 MS.gene36784:CDS 30.0%
! TTAATGGATAAAGAACCTGT+TGG + chr8.2:79185340-79185359 MS.gene36784:CDS 30.0%
! TTATTCAACCTTGTTTGCAA+AGG - chr8.2:79183446-79183465 None:intergenic 30.0%
!! AAATTGATTTGGTTCGAAGT+GGG + chr8.2:79183123-79183142 MS.gene36784:CDS 30.0%
!! TGAAAGCATTATTCAAGGTA+TGG + chr8.2:79184387-79184406 MS.gene36784:CDS 30.0%
!!! AAGTTGTTTTTGGGAATTGT+TGG + chr8.2:79185595-79185614 MS.gene36784:CDS 30.0%
!!! GATAGTATTGCTTTTTCTGT+TGG - chr8.2:79184127-79184146 None:intergenic 30.0%
AAATCAACCACAGTGAAAGA+TGG - chr8.2:79182648-79182667 None:intergenic 35.0%
AAGAAACTCCTTTGCAAACA+AGG + chr8.2:79183435-79183454 MS.gene36784:CDS 35.0%
AATCAACCACAGTGAAAGAT+GGG - chr8.2:79182647-79182666 None:intergenic 35.0%
ACAAATGAAACAGTGGTTGA+AGG + chr8.2:79184833-79184852 MS.gene36784:CDS 35.0%
ACAACCAAACTGTTTCACAT+TGG + chr8.2:79184269-79184288 MS.gene36784:CDS 35.0%
AGCTGATATTGGACTTTCAA+TGG + chr8.2:79185030-79185049 MS.gene36784:CDS 35.0%
AGTTGAGAAAATCTCTGTGA+TGG + chr8.2:79184898-79184917 MS.gene36784:CDS 35.0%
ATATCAGCTTCTTTCAATGC+CGG - chr8.2:79185019-79185038 None:intergenic 35.0%
ATCGAATCAACAGAACAACA+AGG - chr8.2:79183517-79183536 None:intergenic 35.0%
ATGTGTTCCAAATACCATGA+TGG + chr8.2:79184319-79184338 MS.gene36784:CDS 35.0%
ATTGACACACTTCAGAAACA+TGG + chr8.2:79182732-79182751 MS.gene36784:CDS 35.0%
CAAACTGTTTCACATTGGAA+AGG + chr8.2:79184274-79184293 MS.gene36784:CDS 35.0%
CATACTTTATCTCTGATGAC+AGG + chr8.2:79184746-79184765 MS.gene36784:intron 35.0%
CTAATACTGAGAGGTTGAAT+TGG + chr8.2:79185668-79185687 MS.gene36784:CDS 35.0%
CTTTCCAATGTGAAACAGTT+TGG - chr8.2:79184276-79184295 None:intergenic 35.0%
GAGAAGAAGAATGTGTTTGA+AGG + chr8.2:79185559-79185578 MS.gene36784:CDS 35.0%
GATGTGATGAATGCAGTTAT+TGG + chr8.2:79183605-79183624 MS.gene36784:CDS 35.0%
GCATTGAAAGAAGCTGATAT+TGG + chr8.2:79185019-79185038 MS.gene36784:CDS 35.0%
GCTGATATTGGACTTTCAAT+GGG + chr8.2:79185031-79185050 MS.gene36784:CDS 35.0%
GGTGTTCACAAATTGAATTC+AGG + chr8.2:79184070-79184089 MS.gene36784:CDS 35.0%
GTTTCATTTGTGTCCTGATT+AGG - chr8.2:79184824-79184843 None:intergenic 35.0%
TATGGATACATTAGGTGCAT+TGG + chr8.2:79185288-79185307 MS.gene36784:CDS 35.0%
TCAATTCGACAACAAGTGTT+TGG + chr8.2:79182837-79182856 MS.gene36784:CDS 35.0%
TGCAAAAATGCTCGTTACAT+CGG + chr8.2:79183355-79183374 MS.gene36784:CDS 35.0%
TTCACAACCATCATGGTATT+TGG - chr8.2:79184329-79184348 None:intergenic 35.0%
! AAGATGGTGGTAAAAGACAA+TGG + chr8.2:79184487-79184506 MS.gene36784:CDS 35.0%
! AATACTATCTTGGGCTGTTT+TGG + chr8.2:79184138-79184157 MS.gene36784:CDS 35.0%
! GAGCATTTTTGCATATCCAT+CGG - chr8.2:79183348-79183367 None:intergenic 35.0%
! TGGTTCAAGTTTGTGAACAA+GGG - chr8.2:79182492-79182511 None:intergenic 35.0%
! TGTTATAAATTTTGTCGCGG+CGG + chr8.2:79185210-79185229 MS.gene36784:CDS 35.0%
! TTGTTTGTGTTGTTGGTGTT+TGG - chr8.2:79182537-79182556 None:intergenic 35.0%
!! AGAAGTTTGCTAATACTGAG+AGG + chr8.2:79185659-79185678 MS.gene36784:CDS 35.0%
!! AGAGAGTGGATTGTTTGTAT+TGG + chr8.2:79185691-79185710 MS.gene36784:CDS 35.0%
!! CAAATTGATTTGGTTCGAAG+TGG + chr8.2:79183122-79183141 MS.gene36784:CDS 35.0%
!! CTGTTGATTCGATATTTCAC+CGG + chr8.2:79183524-79183543 MS.gene36784:CDS 35.0%
!! GATTCTGAATTCGAGTTTTC+AGG + chr8.2:79184097-79184116 MS.gene36784:CDS 35.0%
!! TGAAAGAAGCTTTTAGAAGG+TGG - chr8.2:79182882-79182901 None:intergenic 35.0%
!! TGTTGATTCGATATTTCACC+GGG + chr8.2:79183525-79183544 MS.gene36784:CDS 35.0%
!!! AGGTGGTTTTTTGTATGTGT+TGG - chr8.2:79182865-79182884 None:intergenic 35.0%
!!! AGGTGTGATTTTTGGTTTCT+TGG - chr8.2:79182622-79182641 None:intergenic 35.0%
!!! GAAGTGGAGTTTTGTTGAAA+AGG + chr8.2:79184239-79184258 MS.gene36784:CDS 35.0%
!!! GGCTGTTTTGGAATTGAAAA+TGG + chr8.2:79184150-79184169 MS.gene36784:CDS 35.0%
!!! TATTTTTGGTGTGACTTCGA+AGG + chr8.2:79185465-79185484 MS.gene36784:CDS 35.0%
AAAATGCTCGTTACATCGGT+TGG + chr8.2:79183359-79183378 MS.gene36784:CDS 40.0%
AAAGTTACAGACGAAGAGCT+TGG + chr8.2:79184448-79184467 MS.gene36784:CDS 40.0%
AACGGAGTTAGAGAGTTCAA+CGG + chr8.2:79183563-79183582 MS.gene36784:CDS 40.0%
AATGATGGCTGATCAAGCAA+TGG + chr8.2:79183721-79183740 MS.gene36784:CDS 40.0%
ACTAACATCCTCAATCGGAA+AGG + chr8.2:79183466-79183485 MS.gene36784:CDS 40.0%
ACTTTCTGCATGTGAGACTA+TGG + chr8.2:79183751-79183770 MS.gene36784:CDS 40.0%
AGATGGAACAAATGATGCAC+CGG + chr8.2:79184997-79185016 MS.gene36784:CDS 40.0%
AGTGTCAATGTGACAGCTAA+TGG - chr8.2:79183683-79183702 None:intergenic 40.0%
ATCAACCACAGTGAAAGATG+GGG - chr8.2:79182646-79182665 None:intergenic 40.0%
CGGAATTCTTCAACCTAATC+AGG + chr8.2:79184808-79184827 MS.gene36784:CDS 40.0%
CTTTCTGCATGTGAGACTAT+GGG + chr8.2:79183752-79183771 MS.gene36784:CDS 40.0%
GAATATGCACCAACTTCCAT+TGG - chr8.2:79183989-79184008 None:intergenic 40.0%
GGACTTTCAATGGGAATTCA+AGG + chr8.2:79185040-79185059 MS.gene36784:CDS 40.0%
GTTGGTATGAACACAACATG+GGG + chr8.2:79183377-79183396 MS.gene36784:CDS 40.0%
TCAGGACACAAATGAAACAG+TGG + chr8.2:79184826-79184845 MS.gene36784:CDS 40.0%
TCCATCTAGGAACAATCCAT+CGG - chr8.2:79183225-79183244 None:intergenic 40.0%
TTCGTCAATGTCGTTGCTTA+TGG - chr8.2:79183417-79183436 None:intergenic 40.0%
! AAAGAGCATGGAGTCAAAGA+AGG + chr8.2:79182981-79183000 MS.gene36784:CDS 40.0%
! ACAATTTGCACCGATAAGAC+AGG + chr8.2:79183785-79183804 MS.gene36784:CDS 40.0%
! AGTAAAGGTTTGTCTGAGAC+TGG - chr8.2:79185763-79185782 None:intergenic 40.0%
! GGAGTTGCTCTAAATACTAC+TGG + chr8.2:79184046-79184065 MS.gene36784:CDS 40.0%
! GGTTGGTATGAACACAACAT+GGG + chr8.2:79183376-79183395 MS.gene36784:CDS 40.0%
! GGTTTAGAACCAATGGAAGT+TGG + chr8.2:79183977-79183996 MS.gene36784:CDS 40.0%
! GTGGTTCAAGTTTGTGAACA+AGG - chr8.2:79182493-79182512 None:intergenic 40.0%
! GTTGCTCTAAATACTACTGG+TGG + chr8.2:79184049-79184068 MS.gene36784:CDS 40.0%
! GTTTGTGCTACTCTTTCACT+TGG + chr8.2:79182948-79182967 MS.gene36784:CDS 40.0%
!! AAAGAAGGTTGGTATGATGG+TGG + chr8.2:79182996-79183015 MS.gene36784:CDS 40.0%
!! ATTGGTGCTTCAAGTTGTGA+TGG + chr8.2:79185624-79185643 MS.gene36784:CDS 40.0%
!! CATTGAGAAGTGTCTCAATG+TGG - chr8.2:79182512-79182531 None:intergenic 40.0%
!! GTCAAAGAAGGTTGGTATGA+TGG + chr8.2:79182993-79183012 MS.gene36784:CDS 40.0%
!! TTGGCTTGGTTTAGAACCAA+TGG + chr8.2:79183970-79183989 MS.gene36784:CDS 40.0%
!!! AAGGTGACAAAGTTTTGGCT+TGG + chr8.2:79183956-79183975 MS.gene36784:CDS 40.0%
!!! TTGGTTTTGCTGCTGTTTCT+TGG + chr8.2:79185710-79185729 MS.gene36784:CDS 40.0%
ACATCCTCAATCGGAAAGGT+TGG + chr8.2:79183470-79183489 MS.gene36784:CDS 45.0%
AGAGGTTGAATTGGAGAGAG+TGG + chr8.2:79185677-79185696 MS.gene36784:CDS 45.0%
AGATGGAGAGACGAACAAGA+TGG + chr8.2:79184471-79184490 MS.gene36784:CDS 45.0%
AGCATGGAGTCAAAGAAGGT+TGG + chr8.2:79182985-79183004 MS.gene36784:CDS 45.0%
ATTAAGGATCCATGTCGTCC+AGG + chr8.2:79184535-79184554 MS.gene36784:CDS 45.0%
CAAACCAACCTTTCCGATTG+AGG - chr8.2:79183477-79183496 None:intergenic 45.0%
CGCAACGGAAAAACCTACTA+AGG + chr8.2:79185315-79185334 MS.gene36784:CDS 45.0%
CTCTACATGATCACTCTCAC+CGG - chr8.2:79183279-79183298 None:intergenic 45.0%
CTCTCAACGAATGTCCATCT+AGG - chr8.2:79183238-79183257 None:intergenic 45.0%
GACACACTTCAGAAACATGG+TGG + chr8.2:79182735-79182754 MS.gene36784:CDS 45.0%
GCTACTCTTTCACTTGGCTT+TGG + chr8.2:79182954-79182973 MS.gene36784:CDS 45.0%
GGGAACACGAAGACTGATAA+CGG + chr8.2:79183545-79183564 MS.gene36784:CDS 45.0%
GGGAATTGTTGGTGTGACAT+TGG + chr8.2:79185606-79185625 MS.gene36784:CDS 45.0%
GTAGTTGCTGTAACTGGAGA+TGG + chr8.2:79184980-79184999 MS.gene36784:CDS 45.0%
GTTAGGACTTGTCGGCATTA+AGG + chr8.2:79184519-79184538 MS.gene36784:CDS 45.0%
GTTATCAGTCTTCGTGTTCC+CGG - chr8.2:79183546-79183565 None:intergenic 45.0%
TGACATTCACACCAGCATGT+TGG - chr8.2:79184585-79184604 None:intergenic 45.0%
! CAGAAACATGGTGGAGTTGA+AGG + chr8.2:79182744-79182763 MS.gene36784:CDS 45.0%
! CGGTTGGTATGAACACAACA+TGG + chr8.2:79183375-79183394 MS.gene36784:CDS 45.0%
! CTCAATCGGAAAGGTTGGTT+TGG + chr8.2:79183475-79183494 MS.gene36784:CDS 45.0%
! GATGGGGTAGGTGTGATTTT+TGG - chr8.2:79182630-79182649 None:intergenic 45.0%
! GTTGATGAATCGAGCATGAC+CGG + chr8.2:79183257-79183276 MS.gene36784:CDS 45.0%
! TCCATCGGCAACTTTTGTTC+CGG - chr8.2:79183333-79183352 None:intergenic 45.0%
!! AGAGGCTTTGTTCTACCAAC+AGG - chr8.2:79185358-79185377 None:intergenic 45.0%
!! GGCTTTGGAATCAAAGAGCA+TGG + chr8.2:79182969-79182988 MS.gene36784:CDS 45.0%
ACAGACGAAGAGCTTGGAGA+TGG + chr8.2:79184454-79184473 MS.gene36784:CDS 50.0%
ACAGCTAATGGCAAACCCTC+AGG - chr8.2:79183671-79183690 None:intergenic 50.0%
ACCACAGTGAAAGATGGGGT+AGG - chr8.2:79182642-79182661 None:intergenic 50.0%
ACCTACCCCATCTTTCACTG+TGG + chr8.2:79182638-79182657 MS.gene36784:CDS 50.0%
CAGCTAATGGCAAACCCTCA+GGG - chr8.2:79183670-79183689 None:intergenic 50.0%
GGTCACGTAGTTGCTGTAAC+TGG + chr8.2:79184974-79184993 MS.gene36784:CDS 50.0%
GTCGTTGTTGCTATCCCTGA+GGG + chr8.2:79183653-79183672 MS.gene36784:CDS 50.0%
GTTGAAGCTTGCCAACATGC+TGG + chr8.2:79184571-79184590 MS.gene36784:CDS 50.0%
TCCGGAACAAAAGTTGCCGA+TGG + chr8.2:79183329-79183348 MS.gene36784:CDS 50.0%
TCTAGGAACAATCCATCGGC+TGG - chr8.2:79183221-79183240 None:intergenic 50.0%
TGGAGAGACGAACAAGATGG+TGG + chr8.2:79184474-79184493 MS.gene36784:CDS 50.0%
TGTCGTTGTTGCTATCCCTG+AGG + chr8.2:79183652-79183671 MS.gene36784:CDS 50.0%
TTGGAAAGGAGCAGCAGAGA+TGG + chr8.2:79184288-79184307 MS.gene36784:CDS 50.0%
!! GCCGATGGATTGTTCCTAGA+TGG + chr8.2:79183221-79183240 MS.gene36784:CDS 50.0%
!! GCTGCTGTTTCTTGGCCAAT+TGG + chr8.2:79185718-79185737 MS.gene36784:CDS 50.0%
CTTCACGCACGAAGAGAGGT+TGG + chr8.2:79184871-79184890 MS.gene36784:CDS 55.0%
GCAACTTCACGCACGAAGAG+AGG + chr8.2:79184867-79184886 MS.gene36784:CDS 55.0%
GGTGATCAAGTACCAGCCGA+TGG + chr8.2:79183206-79183225 MS.gene36784:CDS 55.0%
GTCTTCACTCCTGGACGACA+TGG - chr8.2:79184547-79184566 None:intergenic 55.0%
TCAACCGCTGTCTTCACTCC+TGG - chr8.2:79184556-79184575 None:intergenic 55.0%
TCGTCCAGGAGTGAAGACAG+CGG + chr8.2:79184549-79184568 MS.gene36784:CDS 55.0%
!! AGGTGCATTGGCTCTCGCAA+CGG + chr8.2:79185300-79185319 MS.gene36784:CDS 55.0%
TTTGTCGCGGCGGTTTCAGC+AGG + chr8.2:79185220-79185239 MS.gene36784:CDS 60.0%
!! TCGAAGTGGGCGCCGACAAA+AGG + chr8.2:79183136-79183155 MS.gene36784:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 79182480 79185813 79182480 ID=MS.gene36784
chr8.2 mRNA 79182480 79185813 79182480 ID=MS.gene36784.t1;Parent=MS.gene36784
chr8.2 exon 79182480 79183806 79182480 ID=MS.gene36784.t1.exon1;Parent=MS.gene36784.t1
chr8.2 CDS 79182480 79183806 79182480 ID=cds.MS.gene36784.t1;Parent=MS.gene36784.t1
chr8.2 exon 79183933 79184616 79183933 ID=MS.gene36784.t1.exon2;Parent=MS.gene36784.t1
chr8.2 CDS 79183933 79184616 79183933 ID=cds.MS.gene36784.t1;Parent=MS.gene36784.t1
chr8.2 exon 79184768 79185813 79184768 ID=MS.gene36784.t1.exon3;Parent=MS.gene36784.t1
chr8.2 CDS 79184768 79185813 79184768 ID=cds.MS.gene36784.t1;Parent=MS.gene36784.t1
Gene Sequence

>MS.gene36784

ATGTCAATGCCCTTGTTCACAAACTTGAACCACATTGAGACACTTCTCAATGCACCAAACACCAACAACACAAACAATATAAGATGGCACAATGCCTTCATGACAATCTATTGTTCTAGGGCTTTCATGTTACATTCTACCAAGAAACCAAAAATCACACCTACCCCATCTTTCACTGTGGTTGATTTAACTTCACCTCATTCTTTTACCATTGATCAAGAAACTCTCATAGATATTGTCAAAGAGAAAAACATTGACACACTTCAGAAACATGGTGGAGTTGAAGGTGTTGCTTCATCACTTAAAACTAACGTTGAGTTTGGTCTCAAAAGTCATGATGATGATTTTCAAGACATTTCAATTCGACAACAAGTGTTTGGTTCCAACACATACAAAAAACCACCTTCTAAAAGCTTCTTTCATTTTGTTGTTGAAGCTTTTAAGGATTTAACAATTCTTATTCTTTTGGTTTGTGCTACTCTTTCACTTGGCTTTGGAATCAAAGAGCATGGAGTCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATAGCATTGTCTTCAATAAGCAACTTTAAACAAAACAAACAATTTGATAAATTGTCTCAAGTGAGCAATGATATTCAAATTGATTTGGTTCGAAGTGGGCGCCGACAAAAGGTATCAATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCAGCCGATGGATTGTTCCTAGATGGACATTCGTTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGTGATCATGTAGAGATTAATCAAAACTTTCATCCTTTTTTGTTTTCCGGAACAAAAGTTGCCGATGGATATGCAAAAATGCTCGTTACATCGGTTGGTATGAACACAACATGGGGACAAATGATGAGTTCCATAAGCAACGACATTGACGAAGAAACTCCTTTGCAAACAAGGTTGAATAAACTAACATCCTCAATCGGAAAGGTTGGTTTGGTTGTCGCATTTTTAGTCCTTGTTGTTCTGTTGATTCGATATTTCACCGGGAACACGAAGACTGATAACGGAGTTAGAGAGTTCAACGGTAGAAAGACTAGTTTTGATGATGTGATGAATGCAGTTATTGGAATTATTGCTGATGCTGTTACTATTGTCGTTGTTGCTATCCCTGAGGGTTTGCCATTAGCTGTCACATTGACACTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGAAAACTTTCTGCATGTGAGACTATGGGATCAGCTACTACAATTTGCACCGATAAGACAGGTACTATTTGAAATACAAAATTTAGTTATATTCTGTTAATAGATATTTAATTTATTGATTCTTGACTTACTCTTTATACATAGAATATTTCACACATACTCACTTTGATCATGTGATTTGTAATAGGTACACTCACTTTGAATCAAATGAAGGTGACAAAGTTTTGGCTTGGTTTAGAACCAATGGAAGTTGGTGCATATTCAAATGTTGATCCATATGTTCTTCAATTGATCAAAGAAGGAGTTGCTCTAAATACTACTGGTGGTGTTCACAAATTGAATTCAGGTTCTGATTCTGAATTCGAGTTTTCAGGTAGCCCAACAGAAAAAGCAATACTATCTTGGGCTGTTTTGGAATTGAAAATGGATATGGAGCACTTGACAAAAAGCTGTTCTATTCTTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAAAAGGAATGTTGACAACCAAACTGTTTCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCCAAATACCATGATGGTTGTGAAATTTTGAAAGATCTTGACCATGAATCCATGTTGAAATTTGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTAGCGTATAGAAAAGTTACAGACGAAGAGCTTGGAGATGGAGAGACGAACAAGATGGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTCGGCATTAAGGATCCATGTCGTCCAGGAGTGAAGACAGCGGTTGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTATTACTAAAATATCTTATTTATCGATAACTTGATAACATAAAATCTCTATTTATACATACGAGTCTATATGAAAATGATGAAGATAATAAGAATAATTAACCTAACTAATTGTTAATTAACCATTAACATACTTTATCTCTGATGACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGCGGAATTCTTCAACCTAATCAGGACACAAATGAAACAGTGGTTGAAGGTGAACAATTTCGCAACTTCACGCACGAAGAGAGGTTGGAAAAAGTTGAGAAAATCTCTGTGATGGCAAGATCTTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTAAAAGAAAAAGGTCACGTAGTTGCTGTAACTGGAGATGGAACAAATGATGCACCGGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACTGAAGTAGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTATAAATTGGGGAAGATGTGTTTACAACAACATTCAGAAATTCATTCAATTTCAATTAACAGTGAATGTGGCAGCACTTGTTATAAATTTTGTCGCGGCGGTTTCAGCAGGTGAAGTTCCATTAACAGCAGTTCAATTATTATGGGTGAATTTGATTATGGATACATTAGGTGCATTGGCTCTCGCAACGGAAAAACCTACTAAGGATTTAATGGATAAAGAACCTGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTTTGTCACAAGCTTTGTACCAAATAGTAATTTTATTAACTCTTCAGTTTAAAGGTGAGACTATTTTTGGTGTGACTTCGAAGGTAAATGACACATTGATATTCAATACATTTGTTCTTTGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGCAAGTTGTTTTTGGGAATTGTTGGTGTGACATTGGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTAATACTGAGAGGTTGAATTGGAGAGAGTGGATTGTTTGTATTGGTTTTGCTGCTGTTTCTTGGCCAATTGGTTTTGTTGTGAAGTTTATACCAGTCTCAGACAAACCTTTACTTGATTTCTTGAATTTTAGGAAGAGATATTGA
Protein sequence

>MS.gene36784.t1

MSMPLFTNLNHIETLLNAPNTNNTNNIRWHNAFMTIYCSRAFMLHSTKKPKITPTPSFTVVDLTSPHSFTIDQETLIDIVKEKNIDTLQKHGGVEGVASSLKTNVEFGLKSHDDDFQDISIRQQVFGSNTYKKPPSKSFFHFVVEAFKDLTILILLVCATLSLGFGIKEHGVKEGWYDGGSIFLAVFIVIALSSISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFDIVVGDVVCLKIGDQVPADGLFLDGHSLRVDESSMTGESDHVEINQNFHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLIRYFTGNTKTDNGVREFNGRKTSFDDVMNAVIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPMEVGAYSNVDPYVLQLIKEGVALNTTGGVHKLNSGSDSEFEFSGSPTEKAILSWAVLELKMDMEHLTKSCSILQVETFNSKKKRSGVLLKRNVDNQTVSHWKGAAEMVLRMCSKYHDGCEILKDLDHESMLKFESIIQGMAASSLRCIALAYRKVTDEELGDGETNKMVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILQPNQDTNETVVEGEQFRNFTHEERLEKVEKISVMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVINWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKDLMDKEPVGRTKPLITNIMWRNLLSQALYQIVILLTLQFKGETIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGVTLVLQVVMVEFLKKFANTERLNWREWIVCIGFAAVSWPIGFVVKFIPVSDKPLLDFLNFRKRY