AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36967

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36967.t1 MTR_6g016470 91.266 1019 86 3 1 1016 1 1019 0.0 1878
MS.gene36967.t1 MTR_7g095710 64.941 1024 318 11 28 1016 35 1052 0.0 1254
MS.gene36967.t1 MTR_8g013780 95.462 573 25 1 447 1018 1 573 0.0 1125
MS.gene36967.t1 MTR_2g038310 56.670 967 394 9 52 1008 123 1074 0.0 1035
MS.gene36967.t1 MTR_4g008170 56.643 971 392 12 50 1008 133 1086 0.0 1021
MS.gene36967.t1 MTR_4g008170 56.020 980 391 14 50 1008 133 1093 0.0 1003
MS.gene36967.t1 MTR_2g038310 57.175 885 354 9 52 926 123 992 0.0 935
MS.gene36967.t1 MTR_8g013810 94.311 457 20 1 1 457 1 451 0.0 864
MS.gene36967.t1 MTR_4g008650 47.767 963 459 15 55 1003 79 1011 0.0 863
MS.gene36967.t1 MTR_8g090125 47.689 952 456 16 69 1006 49 972 0.0 845
MS.gene36967.t1 MTR_4g096990 48.380 957 460 14 56 1003 81 1012 0.0 818
MS.gene36967.t1 MTR_5g015590 48.279 959 460 16 56 1003 81 1014 0.0 807
MS.gene36967.t1 MTR_3g103070 46.562 960 477 12 55 1003 82 1016 0.0 801
MS.gene36967.t1 MTR_4g043690 45.855 953 474 14 69 1006 96 1021 0.0 798
MS.gene36967.t1 MTR_0005s0140 45.855 953 474 14 69 1006 11 936 0.0 797
MS.gene36967.t1 MTR_3g103070 48.840 862 408 11 153 1003 1 840 0.0 755
MS.gene36967.t1 MTR_5g015590 48.866 882 415 16 56 926 81 937 0.0 739
MS.gene36967.t1 MTR_2g105830 54.472 738 318 10 63 793 129 855 0.0 734
MS.gene36967.t1 MTR_8g446010 41.245 948 515 15 69 1003 49 967 0.0 684
MS.gene36967.t1 MTR_4g008650 46.752 785 378 14 55 829 79 833 0.0 669
MS.gene36967.t1 MTR_8g045070 40.506 948 499 15 69 1003 49 944 0.0 667
MS.gene36967.t1 MTR_5g015590 47.375 781 379 15 56 829 81 836 0.0 617
MS.gene36967.t1 MTR_5g015590 45.793 725 361 15 56 773 81 780 2.89e-176 534
MS.gene36967.t1 MTR_5g097270 33.181 874 527 16 151 1001 165 1004 4.61e-137 439
MS.gene36967.t1 MTR_4g014480 30.564 1011 612 23 19 1003 3 949 5.02e-128 413
MS.gene36967.t1 MTR_7g100110 32.802 878 454 29 101 880 38 877 1.69e-106 357
MS.gene36967.t1 MTR_8g027160 31.537 872 478 24 106 885 25 869 4.71e-96 325
MS.gene36967.t1 MTR_8g027160 31.458 871 478 24 106 884 25 868 1.00e-94 324
MS.gene36967.t1 MTR_2g105690 61.333 225 82 1 789 1008 19 243 1.79e-92 295
MS.gene36967.t1 MTR_3g103270 30.205 831 484 19 124 889 65 864 1.06e-87 304
MS.gene36967.t1 MTR_8g027160 30.343 758 410 23 106 772 25 755 9.77e-69 245
MS.gene36967.t1 MTR_8g027160 30.211 758 411 23 106 772 25 755 1.99e-68 244
MS.gene36967.t1 MTR_8g089870 24.769 759 466 21 153 880 69 753 3.61e-47 182
MS.gene36967.t1 MTR_7g117500 24.113 817 492 26 220 1018 145 851 2.03e-46 181
MS.gene36967.t1 MTR_2g036650 24.669 604 367 12 218 815 141 662 4.49e-46 180
MS.gene36967.t1 MTR_4g116950 22.857 700 448 18 122 815 44 657 2.06e-45 177
MS.gene36967.t1 MTR_4g127710 23.077 702 444 20 122 815 46 659 4.37e-45 177
MS.gene36967.t1 MTR_4g127710 23.044 703 443 20 122 815 46 659 5.35e-45 176
MS.gene36967.t1 MTR_3g108800 24.917 602 367 15 218 815 136 656 3.38e-44 174
MS.gene36967.t1 MTR_3g108800 24.917 602 367 15 218 815 135 655 3.49e-44 174
MS.gene36967.t1 MTR_2g449840 23.011 704 457 17 122 823 44 664 7.15e-44 172
MS.gene36967.t1 MTR_1g009760 24.541 599 373 14 218 815 139 659 1.18e-43 171
MS.gene36967.t1 MTR_1g009760 24.419 602 370 14 218 815 136 656 2.23e-43 171
MS.gene36967.t1 MTR_6g011310 24.138 609 378 18 218 823 138 665 5.69e-43 170
MS.gene36967.t1 MTR_7g117500 23.745 817 484 27 220 1018 145 840 1.11e-42 169
MS.gene36967.t1 MTR_2g104860 25.000 616 364 18 218 823 134 661 1.61e-42 169
MS.gene36967.t1 MTR_4g107500 24.053 607 381 17 218 823 140 667 2.65e-42 168
MS.gene36967.t1 MTR_8g063880 24.207 599 375 16 218 815 136 656 8.26e-42 166
MS.gene36967.t1 MTR_6g011310 24.466 609 371 19 218 823 138 660 2.57e-41 165
MS.gene36967.t1 MTR_1g009720 23.422 602 376 15 218 815 136 656 1.47e-40 162
MS.gene36967.t1 MTR_8g006790 23.229 607 385 17 218 823 144 670 1.05e-37 153
MS.gene36967.t1 MTR_5g052190 73.750 80 21 0 520 599 279 358 7.10e-30 128
MS.gene36967.t1 MTR_4g094695 24.185 583 325 19 243 818 465 937 1.82e-23 107
MS.gene36967.t1 MTR_3g097560 23.942 685 387 24 172 778 215 843 1.06e-22 105
MS.gene36967.t1 MTR_2g035840 30.808 198 103 4 623 820 775 938 4.47e-19 93.6
MS.gene36967.t1 MTR_2g090610 20.797 803 443 22 211 857 98 863 5.22e-19 93.6
MS.gene36967.t1 MTR_2g090610 20.712 787 463 21 211 857 98 863 7.81e-19 92.8
MS.gene36967.t1 MTR_8g079250 29.508 183 97 3 638 820 788 938 6.33e-17 86.7
MS.gene36967.t1 MTR_4g008640 46.316 95 45 2 585 679 82 170 7.79e-17 79.7
MS.gene36967.t1 MTR_5g010420 30.000 190 97 5 611 797 750 906 1.63e-16 85.5
MS.gene36967.t1 MTR_8g012390 29.858 211 108 5 629 838 751 922 7.53e-16 83.2
MS.gene36967.t1 MTR_4g112430 23.733 434 238 17 500 854 555 974 6.31e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36967.t1 AT3G22910 68.142 1017 296 11 12 1017 17 1016 0.0 1316
MS.gene36967.t1 AT3G63380 65.837 1004 309 8 28 1012 27 1015 0.0 1276
MS.gene36967.t1 AT4G29900 56.076 1004 407 11 27 1016 79 1062 0.0 1074
MS.gene36967.t1 AT4G29900 56.076 1004 407 11 27 1016 79 1062 0.0 1074
MS.gene36967.t1 AT5G57110 56.757 962 397 8 64 1016 109 1060 0.0 1057
MS.gene36967.t1 AT5G57110 56.757 962 397 8 64 1016 109 1060 0.0 1057
MS.gene36967.t1 AT5G57110 56.757 962 397 8 64 1016 109 1060 0.0 1057
MS.gene36967.t1 AT3G21180 56.095 968 397 12 65 1016 124 1079 0.0 1018
MS.gene36967.t1 AT3G57330 47.435 955 466 12 56 1003 80 1005 0.0 859
MS.gene36967.t1 AT3G57330 47.435 955 466 12 56 1003 25 950 0.0 858
MS.gene36967.t1 AT2G41560 44.214 1011 518 14 6 1006 37 1011 0.0 838
MS.gene36967.t1 AT2G41560 46.375 938 464 13 79 1006 1 909 0.0 825
MS.gene36967.t1 AT2G41560 46.375 938 464 13 79 1006 1 909 0.0 825
MS.gene36967.t1 AT2G41560 46.375 938 464 13 79 1006 1 909 0.0 825
MS.gene36967.t1 AT1G27770 46.973 958 471 13 58 1003 85 1017 0.0 813
MS.gene36967.t1 AT1G27770 46.973 958 471 13 58 1003 85 1017 0.0 813
MS.gene36967.t1 AT1G27770 46.868 958 472 12 58 1003 22 954 0.0 812
MS.gene36967.t1 AT4G37640 46.771 960 476 14 55 1003 79 1014 0.0 785
MS.gene36967.t1 AT2G22950 46.875 960 476 14 55 1003 79 1015 0.0 780
MS.gene36967.t1 AT5G53010 38.529 911 478 21 69 950 140 997 3.62e-179 550
MS.gene36967.t1 AT5G53010 37.730 652 386 12 62 711 133 766 2.30e-125 400
MS.gene36967.t1 AT1G27770 40.792 581 314 10 55 621 82 646 4.83e-119 388
MS.gene36967.t1 AT1G27770 57.929 309 125 2 700 1003 635 943 1.04e-109 363
MS.gene36967.t1 AT1G07670 33.931 837 457 27 122 884 54 868 9.76e-108 360
MS.gene36967.t1 AT1G07670 33.931 837 457 27 122 884 54 868 9.76e-108 360
MS.gene36967.t1 AT1G07810 33.931 837 457 27 122 884 54 868 9.86e-108 360
MS.gene36967.t1 AT4G00900 33.411 859 461 27 94 867 14 846 2.33e-103 348
MS.gene36967.t1 AT4G00900 33.411 859 461 27 94 867 14 846 2.33e-103 348
MS.gene36967.t1 AT1G10130 28.659 977 548 27 122 994 32 963 7.81e-89 307
MS.gene36967.t1 AT3G60330 25.162 616 358 22 219 823 138 661 1.75e-45 178
MS.gene36967.t1 AT3G60330 25.162 616 358 22 219 823 138 661 1.75e-45 178
MS.gene36967.t1 AT3G60330 25.000 616 359 22 219 823 138 661 3.36e-45 177
MS.gene36967.t1 AT3G60330 25.000 616 359 22 219 823 138 661 3.36e-45 177
MS.gene36967.t1 AT1G80660 24.311 617 367 18 218 823 10 537 8.59e-45 175
MS.gene36967.t1 AT1G80660 24.311 617 367 18 218 823 139 666 9.40e-45 176
MS.gene36967.t1 AT1G80660 24.311 617 367 18 218 823 139 666 9.45e-45 176
MS.gene36967.t1 AT2G24520 25.632 593 358 17 225 815 188 699 1.11e-44 176
MS.gene36967.t1 AT1G80660 24.311 617 367 18 218 823 139 666 1.28e-44 175
MS.gene36967.t1 AT2G24520 25.632 593 358 17 225 815 125 636 1.33e-44 175
MS.gene36967.t1 AT2G24520 25.632 593 358 17 225 815 125 636 1.33e-44 175
MS.gene36967.t1 AT3G42640 23.715 759 464 27 78 823 8 664 5.53e-44 173
MS.gene36967.t1 AT2G07560 24.093 772 490 25 78 846 8 686 1.07e-43 172
MS.gene36967.t1 AT3G47950 23.833 621 365 20 218 823 142 669 8.06e-43 169
MS.gene36967.t1 AT3G47950 23.833 621 365 20 218 823 142 669 8.06e-43 169
MS.gene36967.t1 AT5G62670 23.684 608 382 16 218 823 138 665 1.00e-42 169
MS.gene36967.t1 AT4G30190 24.406 631 395 17 218 846 134 684 3.13e-42 167
MS.gene36967.t1 AT2G18960 24.406 631 395 18 218 846 70 620 1.02e-41 166
MS.gene36967.t1 AT2G18960 24.406 631 395 18 218 846 70 620 1.02e-41 166
MS.gene36967.t1 AT5G57350 24.172 604 369 17 218 815 135 655 1.13e-41 166
MS.gene36967.t1 AT5G57350 24.172 604 369 17 218 815 135 655 1.13e-41 166
MS.gene36967.t1 AT5G57350 24.172 604 369 17 218 815 135 655 1.13e-41 166
MS.gene36967.t1 AT2G18960 24.406 631 395 18 218 846 134 684 1.57e-41 166
MS.gene36967.t1 AT1G17260 24.342 608 362 15 218 815 142 661 2.54e-41 165
MS.gene36967.t1 AT4G30190 23.379 663 395 20 218 846 134 717 1.96e-38 155
MS.gene36967.t1 AT5G57350 24.480 433 273 11 385 815 13 393 8.07e-30 127
MS.gene36967.t1 AT2G24520 24.537 432 274 11 385 815 13 393 5.76e-29 124
MS.gene36967.t1 AT5G23630 22.951 671 384 20 172 765 215 829 1.09e-21 102
MS.gene36967.t1 AT1G63440 31.148 183 94 2 638 820 787 937 2.66e-19 94.4
MS.gene36967.t1 AT5G44790 31.683 202 105 4 619 820 780 948 9.36e-19 92.8
MS.gene36967.t1 AT4G11730 23.529 340 214 13 122 454 45 345 9.48e-17 85.9
MS.gene36967.t1 AT4G30110 28.302 212 112 5 635 846 508 679 8.47e-15 79.7
MS.gene36967.t1 AT4G30110 28.302 212 112 5 635 846 508 679 8.47e-15 79.7

Find 165 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAACCATCATGGTATT+TGG 0.149166 8.4:-77155871 None:intergenic
TAACAGCAGTTCAATTATTA+TGG 0.156185 8.4:+77156799 MS.gene36967:CDS
TTATTAACTCTTCAGTTTAA+AGG 0.186479 8.4:+77156981 MS.gene36967:CDS
TCATGACAATATATTGTTCT+AGG 0.195135 8.4:+77154122 MS.gene36967:CDS
AATAATTGAACTGCTGTTAA+TGG 0.212762 8.4:-77156795 None:intergenic
TGAGTTTAATGCAAGGAAAT+TGG 0.225227 8.4:+77157082 MS.gene36967:CDS
TCTTATATTGTTTGTGTTGT+TGG 0.228608 8.4:-77154086 None:intergenic
ATTATGGGTGAATTTGATTA+TGG 0.241738 8.4:+77156815 MS.gene36967:CDS
CTATAGTAACAGTTATAAAT+TGG 0.242031 8.4:+77156664 MS.gene36967:CDS
TTTAACAATTCTTATTCTTT+TGG 0.264806 8.4:+77154471 MS.gene36967:CDS
AATACTATCTTGGGCTGTTT+TGG 0.272622 8.4:+77155683 MS.gene36967:CDS
ACTTTCTGCATGTGAGACTA+TGG 0.281744 8.4:+77155296 MS.gene36967:CDS
AAAACCTACTAAGGATTTAA+TGG 0.285321 8.4:+77156869 MS.gene36967:CDS
TTTGGAATTGAAAATGGATA+TGG 0.303373 8.4:+77155701 MS.gene36967:CDS
CTTAAAACTAACATTGAGTT+TGG 0.304565 8.4:+77154325 MS.gene36967:CDS
CAATGATATTCAAATTGATT+TGG 0.308945 8.4:+77154657 MS.gene36967:CDS
GGTGTTCACAAATTGAATTC+AGG 0.308966 8.4:+77155615 MS.gene36967:CDS
AAATGAAGGTGACAAAGTTT+TGG 0.310296 8.4:+77155496 MS.gene36967:CDS
GTTATCAGTCTTCGTGTTCC+CGG 0.311426 8.4:-77155088 None:intergenic
GAGTTAATAAAATTACTATT+TGG 0.311758 8.4:-77156968 None:intergenic
GTTTCATTTGTGTCCTGATT+AGG 0.317439 8.4:-77156366 None:intergenic
TTCGTCAATGTCGTTGCTTA+TGG 0.324687 8.4:-77154959 None:intergenic
CTTTCCAATGTGAAACAGTT+TGG 0.327124 8.4:-77155818 None:intergenic
TCAAATAGTACCTGTCTTAT+CGG 0.329348 8.4:-77155340 None:intergenic
CAAATTTCAACATGGATTCA+TGG 0.334533 8.4:-77155911 None:intergenic
GCTGCTGTTTCTTGGCCAAT+TGG 0.334729 8.4:+77157263 MS.gene36967:CDS
GCTACTCTTTCACTTGGCTT+TGG 0.339406 8.4:+77154499 MS.gene36967:CDS
GTTAGGACTTGTCGGCATTA+AGG 0.342087 8.4:+77156064 MS.gene36967:CDS
TTGATCAATTGAAGAACATA+TGG 0.343534 8.4:-77155564 None:intergenic
GACAATGGTTTAACATTGTT+AGG 0.351609 8.4:+77156047 MS.gene36967:CDS
GTTCAATGCTTAAAAGAAAA+AGG 0.354812 8.4:+77156498 MS.gene36967:CDS
TATAGTAACAGTTATAAATT+GGG 0.361053 8.4:+77156665 MS.gene36967:CDS
CACATAATGTTAGTTATAAG+AGG 0.361954 8.4:-77156918 None:intergenic
CTAATACTGAGAGGTTGAAT+TGG 0.365165 8.4:+77157213 MS.gene36967:CDS
GGTCACGTAGTTGCTGTAAC+TGG 0.372819 8.4:+77156519 MS.gene36967:CDS
CGGAATTCTTCAACCTAATC+AGG 0.375327 8.4:+77156353 MS.gene36967:CDS
AGCTGATATTGGACTTTCAA+TGG 0.376166 8.4:+77156575 MS.gene36967:CDS
CTCAATCGGAAAGGTTGGTT+TGG 0.386409 8.4:+77155020 MS.gene36967:CDS
AACAGCAGTTCAATTATTAT+GGG 0.388612 8.4:+77156800 MS.gene36967:CDS
GATGTGATGAATGCAGTTAT+TGG 0.388736 8.4:+77155150 MS.gene36967:CDS
AATTTGATTATGGATACATT+AGG 0.389466 8.4:+77156825 MS.gene36967:CDS
GCCGATGGATTGTTCGTAGA+TGG 0.389779 8.4:+77154766 MS.gene36967:CDS
TTGTTTGTGTTGTTGGTGTT+TGG 0.395216 8.4:-77154079 None:intergenic
TCAATTCGACAACAAGTGTT+TGG 0.401723 8.4:+77154382 MS.gene36967:CDS
GATGTTGTTTGTTTGAAGAT+TGG 0.403237 8.4:+77154730 MS.gene36967:CDS
TTATCCATTAAATCCTTAGT+AGG 0.405284 8.4:-77156873 None:intergenic
AGAGGCTTTGTTCTACCAAC+AGG 0.415046 8.4:-77156900 None:intergenic
GCATTGAAAGAAGCTGATAT+TGG 0.419377 8.4:+77156564 MS.gene36967:CDS
CAAACCAACCTTTCCGATTG+AGG 0.434963 8.4:-77155019 None:intergenic
GGACTTTCAATGGGAATTCA+AGG 0.435159 8.4:+77156585 MS.gene36967:CDS
GTGAATGTCAAAATGATTAC+AGG 0.438056 8.4:+77156140 MS.gene36967:CDS
ACCATTAGAAGTTTATCAAA+AGG 0.438596 8.4:-77156477 None:intergenic
AGAGGTTGAATTGGAGAGAG+TGG 0.441904 8.4:+77157222 MS.gene36967:CDS
TACGAGAGTTTCTTGATCAA+TGG 0.446567 8.4:-77154233 None:intergenic
GTTCTTCAATTGATCAAAGA+AGG 0.446882 8.4:+77155570 MS.gene36967:CDS
TCAATATTTGATATTGTTGT+TGG 0.451599 8.4:+77154706 MS.gene36967:CDS
CAGAAACATGGTGGAGTTGA+AGG 0.451952 8.4:+77154289 MS.gene36967:CDS
GTCGTTGTTGCTATCCCTGA+GGG 0.454074 8.4:+77155198 MS.gene36967:CDS
AACTTCACAACAAAACCAAT+TGG 0.455892 8.4:-77157278 None:intergenic
TCAAAATTTCACAACCATCA+TGG 0.460213 8.4:-77155878 None:intergenic
CATGACAATATATTGTTCTA+GGG 0.460372 8.4:+77154123 MS.gene36967:CDS
GAGAAGAAGAATGTGTTTGA+AGG 0.463945 8.4:+77157104 MS.gene36967:CDS
TGAAAGCATTATTCAAGGTA+TGG 0.464548 8.4:+77155932 MS.gene36967:CDS
AAATTTGAAAGCATTATTCA+AGG 0.465165 8.4:+77155927 MS.gene36967:CDS
TTTGTCGCGGCGGTTTCAGC+AGG 0.465185 8.4:+77156765 MS.gene36967:CDS
AGTGTCAATGTGACAGCTAA+TGG 0.468246 8.4:-77155225 None:intergenic
AGAGAGTGGATTGTTTGTAT+TGG 0.469398 8.4:+77157236 MS.gene36967:CDS
TCAACCGCTGTCTTCACTCC+TGG 0.474177 8.4:-77156098 None:intergenic
TATGGATACATTAGGTGCAT+TGG 0.476382 8.4:+77156833 MS.gene36967:CDS
GCTGATATTGGACTTTCAAT+GGG 0.477956 8.4:+77156576 MS.gene36967:CDS
ACAGCTAATGGCAAACCCTC+AGG 0.482999 8.4:-77155213 None:intergenic
GAATATGCACCAACTTCCAT+TGG 0.484480 8.4:-77155531 None:intergenic
CAATGAAATAACAATGAAAA+CGG 0.486044 8.4:-77154578 None:intergenic
TTAACATTGTTAGGACTTGT+CGG 0.492019 8.4:+77156056 MS.gene36967:CDS
AAAGTTACAGACGAAGAGCT+TGG 0.493916 8.4:+77155993 MS.gene36967:CDS
CTGTTGATTCGATATTTCAC+CGG 0.495373 8.4:+77155069 MS.gene36967:CDS
GTTTGTGCTACTCTTTCACT+TGG 0.496780 8.4:+77154493 MS.gene36967:CDS
GGTTTAGAACCAATGGAAGT+TGG 0.498433 8.4:+77155522 MS.gene36967:CDS
GGAGTTGCTCTAAATACTAC+TGG 0.498528 8.4:+77155591 MS.gene36967:CDS
GTTGATGAATCGAGCATGAC+CGG 0.505360 8.4:+77154802 MS.gene36967:CDS
TCGAAGTGGGCGCCGACAAA+AGG 0.507237 8.4:+77154681 MS.gene36967:CDS
CGGTTGGTATGAACACAACA+TGG 0.507879 8.4:+77154920 MS.gene36967:CDS
AATAAACTAACATCCTCAAT+CGG 0.510354 8.4:+77155006 MS.gene36967:CDS
AAGAAACTCCTTTGCAAACA+AGG 0.516856 8.4:+77154980 MS.gene36967:CDS
GTCTTCACTCCTGGACGACA+TGG 0.518276 8.4:-77156089 None:intergenic
ATCAAAGAAGGTTGGTATGA+TGG 0.518871 8.4:+77154538 MS.gene36967:CDS
GGGAATTGTTGGTGTGACAT+TGG 0.521518 8.4:+77157151 MS.gene36967:CDS
GTGGTTCAAGTTTGTGAACA+AGG 0.521853 8.4:-77154035 None:intergenic
AGTAAAGGTTTGTCTGAGAC+TGG 0.521937 8.4:-77157305 None:intergenic
AAATCAACCACGGTGAAAGA+TGG 0.523772 8.4:-77154190 None:intergenic
ATATCAGCTTCTTTCAATGC+CGG 0.524112 8.4:-77156561 None:intergenic
CTTCACGCACGAAGAGAGGT+TGG 0.525168 8.4:+77156416 MS.gene36967:CDS
CTCTTATAACTAACATTATG+TGG 0.531696 8.4:+77156919 MS.gene36967:CDS
AGAACAATATATTGTCATGA+AGG 0.533453 8.4:-77154119 None:intergenic
ACAACCAAACTGTTTCACAT+TGG 0.535219 8.4:+77155814 MS.gene36967:CDS
GCAACTTCACGCACGAAGAG+AGG 0.537170 8.4:+77156412 MS.gene36967:CDS
AACTCAAAGAAGAAAAGAAG+TGG 0.537966 8.4:+77155768 MS.gene36967:CDS
AGAAGAAGAATGTGTTTGAA+GGG 0.540107 8.4:+77157105 MS.gene36967:CDS
AAAATGCTCGTTACATCGGT+TGG 0.541310 8.4:+77154904 MS.gene36967:CDS
ATTGGTGCTTCAAGTTGTGA+TGG 0.541508 8.4:+77157169 MS.gene36967:CDS
GGCTTTGGAATCAAAGAGCA+TGG 0.546075 8.4:+77154514 MS.gene36967:CDS
TTGGCTTGGTTTAGAACCAA+TGG 0.546364 8.4:+77155515 MS.gene36967:CDS
ACAACACAAACAATATAAGA+TGG 0.547366 8.4:+77154089 MS.gene36967:CDS
ACATCCTCAATCGGAAAGGT+TGG 0.547400 8.4:+77155015 MS.gene36967:CDS
AAAGAGCATGGAATCAAAGA+AGG 0.549041 8.4:+77154526 MS.gene36967:CDS
ACTCACTTTGAATCAAATGA+AGG 0.553950 8.4:+77155482 MS.gene36967:CDS
TTATTCAACCTTGTTTGCAA+AGG 0.556386 8.4:-77154988 None:intergenic
AGCATGGAATCAAAGAAGGT+TGG 0.557290 8.4:+77154530 MS.gene36967:CDS
GTAGTTGCTGTAACTGGAGA+TGG 0.559458 8.4:+77156525 MS.gene36967:CDS
AGTTGAGAAAATCTCTGTGA+TGG 0.561269 8.4:+77156443 MS.gene36967:CDS
CTTTCTGCATGTGAGACTAT+GGG 0.561453 8.4:+77155297 MS.gene36967:CDS
ACAAATGAAACAGTGGTTGA+AGG 0.561818 8.4:+77156378 MS.gene36967:CDS
TTATTCAATGAAGAAAATGA+TGG 0.562067 8.4:+77155251 MS.gene36967:CDS
CAAATTGATTTGGTTCGAAG+TGG 0.562120 8.4:+77154667 MS.gene36967:CDS
CTCTACATGATCGCTCTCAC+CGG 0.562804 8.4:-77154821 None:intergenic
ACAGACGAAGAGCTTGGAGA+TGG 0.562863 8.4:+77155999 MS.gene36967:CDS
TCCGGAACAAAAGTTGCCGA+TGG 0.563913 8.4:+77154874 MS.gene36967:CDS
TTGGAAAGGAGCAGCAGAGA+TGG 0.565912 8.4:+77155833 MS.gene36967:CDS
ATTAAGGATCCATGTCGTCC+AGG 0.566040 8.4:+77156080 MS.gene36967:CDS
ACAATTTGCACCGATAAGAC+AGG 0.572673 8.4:+77155330 MS.gene36967:CDS
ATTTCAATTAACAGTGAATG+TGG 0.574758 8.4:+77156725 MS.gene36967:CDS
AAATTGATTTGGTTCGAAGT+GGG 0.582829 8.4:+77154668 MS.gene36967:CDS
TGTTGATTCGATATTTCACC+GGG 0.582880 8.4:+77155070 MS.gene36967:CDS
TCTACGAACAATCCATCGGC+TGG 0.583270 8.4:-77154763 None:intergenic
AAATTCAAGAAATCAAGTAA+AGG 0.584542 8.4:-77157320 None:intergenic
TGTGAACAAGGGCATTGACA+TGG 0.585662 8.4:-77154023 None:intergenic
GGGAACACGAAGACTGATAA+CGG 0.595313 8.4:+77155090 MS.gene36967:CDS
AGATGGAACAAATGATGCAC+CGG 0.596050 8.4:+77156542 MS.gene36967:CDS
AGGTGCATTGGCTCTCGCAA+CGG 0.600700 8.4:+77156845 MS.gene36967:CDS
GTTGAAGCTTGCCAACATGC+TGG 0.601597 8.4:+77156116 MS.gene36967:CDS
CAAACTGTTTCACATTGGAA+AGG 0.603341 8.4:+77155819 MS.gene36967:CDS
TGACATTCACACCAGCATGT+TGG 0.604962 8.4:-77156127 None:intergenic
AAAGAAGGTTGGTATGATGG+TGG 0.609959 8.4:+77154541 MS.gene36967:CDS
TGGTTCAAGTTTGTGAACAA+GGG 0.619115 8.4:-77154034 None:intergenic
CAGCTAATGGCAAACCCTCA+GGG 0.620845 8.4:-77155212 None:intergenic
ACTAACATCCTCAATCGGAA+AGG 0.622770 8.4:+77155011 MS.gene36967:CDS
TCCATCTACGAACAATCCAT+CGG 0.630228 8.4:-77154767 None:intergenic
TGTTTAATGAGTTTAATGCA+AGG 0.630387 8.4:+77157075 MS.gene36967:CDS
TGTCGTTGTTGCTATCCCTG+AGG 0.631694 8.4:+77155197 MS.gene36967:CDS
AGATGGAGAGACGAACAAGA+TGG 0.639024 8.4:+77156016 MS.gene36967:CDS
GGTGATCAAGTACCAGCCGA+TGG 0.639660 8.4:+77154751 MS.gene36967:CDS
GGTTGGTATGAACACAACAT+GGG 0.640345 8.4:+77154921 MS.gene36967:CDS
AATGCTTTCAAATTTCAACA+TGG 0.641477 8.4:-77155919 None:intergenic
ATGTGTTCCAAATACCATGA+TGG 0.646032 8.4:+77155864 MS.gene36967:CDS
TTAATGGATAAAGAACCTGT+TGG 0.647999 8.4:+77156885 MS.gene36967:CDS
ATAGTAACAGTTATAAATTG+GGG 0.650143 8.4:+77156666 MS.gene36967:CDS
AAGATGGTGGTAAAAGACAA+TGG 0.652183 8.4:+77156032 MS.gene36967:CDS
TGATCAATGGTAAAAGAGTG+AGG 0.652312 8.4:-77154220 None:intergenic
AGAAGTTTGCTAATACTGAG+AGG 0.658673 8.4:+77157204 MS.gene36967:CDS
TTATAACTAACATTATGTGG+AGG 0.663994 8.4:+77156922 MS.gene36967:CDS
TGGAGAGACGAACAAGATGG+TGG 0.667020 8.4:+77156019 MS.gene36967:CDS
ATTGACACACTTCAGAAACA+TGG 0.669798 8.4:+77154277 MS.gene36967:CDS
TCAGGACACAAATGAAACAG+TGG 0.678564 8.4:+77156371 MS.gene36967:CDS
AATGATGGCTGATCAAGCAA+TGG 0.680846 8.4:+77155266 MS.gene36967:CDS
AACGGAGTTAGAGAGTTCAA+CGG 0.695815 8.4:+77155108 MS.gene36967:CDS
GTTGCTCTAAATACTACTGG+TGG 0.704322 8.4:+77155594 MS.gene36967:CDS
ACCTACTCCATCTTTCACCG+TGG 0.705281 8.4:+77154183 MS.gene36967:CDS
GTTGGTATGAACACAACATG+GGG 0.705560 8.4:+77154922 MS.gene36967:CDS
ACCACGGTGAAAGATGGAGT+AGG 0.718242 8.4:-77154184 None:intergenic
AAAGCTATAGCATTTGAATG+CGG 0.720955 8.4:+77156333 MS.gene36967:CDS
AGGTGAAGTTAAATCAACCA+CGG 0.722311 8.4:-77154200 None:intergenic
GACACACTTCAGAAACATGG+TGG 0.728054 8.4:+77154280 MS.gene36967:CDS
ATCGAATCAACAGAACAACA+AGG 0.735048 8.4:-77155059 None:intergenic
CATTGAGAAGTGTCTCAATG+TGG 0.745193 8.4:-77154054 None:intergenic
TCGTCCAGGAGTGAAGACAG+CGG 0.774137 8.4:+77156094 MS.gene36967:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAGTTAATAAAATTACTATT+TGG - chr8.4:77156971-77156990 None:intergenic 15.0%
!! TATAGTAACAGTTATAAATT+GGG + chr8.4:77156665-77156684 MS.gene36967:CDS 15.0%
!!! TTTAACAATTCTTATTCTTT+TGG + chr8.4:77154471-77154490 MS.gene36967:CDS 15.0%
!! AAATTCAAGAAATCAAGTAA+AGG - chr8.4:77157323-77157342 None:intergenic 20.0%
!! AATTTGATTATGGATACATT+AGG + chr8.4:77156825-77156844 MS.gene36967:CDS 20.0%
!! ATAGTAACAGTTATAAATTG+GGG + chr8.4:77156666-77156685 MS.gene36967:CDS 20.0%
!! CAATGAAATAACAATGAAAA+CGG - chr8.4:77154581-77154600 None:intergenic 20.0%
!! CAATGATATTCAAATTGATT+TGG + chr8.4:77154657-77154676 MS.gene36967:CDS 20.0%
!! CTATAGTAACAGTTATAAAT+TGG + chr8.4:77156664-77156683 MS.gene36967:CDS 20.0%
!! TCAATATTTGATATTGTTGT+TGG + chr8.4:77154706-77154725 MS.gene36967:CDS 20.0%
!! TGGTTAATTAACAATTAGTT+AGG - chr8.4:77156267-77156286 None:intergenic 20.0%
!! TTATTAACTCTTCAGTTTAA+AGG + chr8.4:77156981-77157000 MS.gene36967:CDS 20.0%
!! TTATTCAATGAAGAAAATGA+TGG + chr8.4:77155251-77155270 MS.gene36967:CDS 20.0%
!!! AAATGAAAGAAACTTTTAGA+AGG - chr8.4:77154430-77154449 None:intergenic 20.0%
!!! AAATTTGAAAGCATTATTCA+AGG + chr8.4:77155927-77155946 MS.gene36967:CDS 20.0%
!!! TACTTGATTTCTTGAATTTT+AGG + chr8.4:77157324-77157343 MS.gene36967:CDS 20.0%
! AAAACCTACTAAGGATTTAA+TGG + chr8.4:77156869-77156888 MS.gene36967:CDS 25.0%
! AACAGCAGTTCAATTATTAT+GGG + chr8.4:77156800-77156819 MS.gene36967:CDS 25.0%
! AATAAACTAACATCCTCAAT+CGG + chr8.4:77155006-77155025 MS.gene36967:CDS 25.0%
! AATAATTGAACTGCTGTTAA+TGG - chr8.4:77156798-77156817 None:intergenic 25.0%
! AATGCTTTCAAATTTCAACA+TGG - chr8.4:77155922-77155941 None:intergenic 25.0%
! ACAACACAAACAATATAAGA+TGG + chr8.4:77154089-77154108 MS.gene36967:CDS 25.0%
! ACCATTAGAAGTTTATCAAA+AGG - chr8.4:77156480-77156499 None:intergenic 25.0%
! AGAAAAAGCAATACTATCTT+GGG + chr8.4:77155674-77155693 MS.gene36967:CDS 25.0%
! AGAACAATATATTGTCATGA+AGG - chr8.4:77154122-77154141 None:intergenic 25.0%
! ATTATGGGTGAATTTGATTA+TGG + chr8.4:77156815-77156834 MS.gene36967:CDS 25.0%
! ATTTCAATTAACAGTGAATG+TGG + chr8.4:77156725-77156744 MS.gene36967:CDS 25.0%
! CACATAATGTTAGTTATAAG+AGG - chr8.4:77156921-77156940 None:intergenic 25.0%
! CATGACAATATATTGTTCTA+GGG + chr8.4:77154123-77154142 MS.gene36967:CDS 25.0%
! CTCTTATAACTAACATTATG+TGG + chr8.4:77156919-77156938 MS.gene36967:CDS 25.0%
! CTTAAAACTAACATTGAGTT+TGG + chr8.4:77154325-77154344 MS.gene36967:CDS 25.0%
! GTTCAATGCTTAAAAGAAAA+AGG + chr8.4:77156498-77156517 MS.gene36967:CDS 25.0%
! TAACAGCAGTTCAATTATTA+TGG + chr8.4:77156799-77156818 MS.gene36967:CDS 25.0%
! TCAGACATAAAGTATGTTAA+TGG - chr8.4:77156287-77156306 None:intergenic 25.0%
! TCATGACAATATATTGTTCT+AGG + chr8.4:77154122-77154141 MS.gene36967:CDS 25.0%
! TCTTATATTGTTTGTGTTGT+TGG - chr8.4:77154089-77154108 None:intergenic 25.0%
! TGTTTAATGAGTTTAATGCA+AGG + chr8.4:77157075-77157094 MS.gene36967:CDS 25.0%
! TTATAACTAACATTATGTGG+AGG + chr8.4:77156922-77156941 MS.gene36967:CDS 25.0%
! TTATCCATTAAATCCTTAGT+AGG - chr8.4:77156876-77156895 None:intergenic 25.0%
! TTGATCAATTGAAGAACATA+TGG - chr8.4:77155567-77155586 None:intergenic 25.0%
!! CAAATATTGATACCTTTTGT+CGG - chr8.4:77154696-77154715 None:intergenic 25.0%
!! TCCTTTTGATAAACTTCTAA+TGG + chr8.4:77156476-77156495 MS.gene36967:CDS 25.0%
!! TTGATCATGTGATTTGTAAT+AGG + chr8.4:77155456-77155475 MS.gene36967:intron 25.0%
!! TTTAAAGGTGAGACTATTTT+TGG + chr8.4:77156996-77157015 MS.gene36967:CDS 25.0%
!! TTTGGAATTGAAAATGGATA+TGG + chr8.4:77155701-77155720 MS.gene36967:CDS 25.0%
!!! ACTTGTTATAAATTTTGTCG+CGG + chr8.4:77156752-77156771 MS.gene36967:CDS 25.0%
!!! ATAGTATTGCTTTTTCTGTT+GGG - chr8.4:77155671-77155690 None:intergenic 25.0%
!!! ATTTAAGAGCAAGTTGTTTT+TGG + chr8.4:77157130-77157149 MS.gene36967:CDS 25.0%
!!! TTTAAGAGCAAGTTGTTTTT+GGG + chr8.4:77157131-77157150 MS.gene36967:CDS 25.0%
!!! TTTCATCCTTTTTTGTTTTC+CGG + chr8.4:77154856-77154875 MS.gene36967:CDS 25.0%
!!! TTTTGTTGTTGAAGCTTTTA+AGG + chr8.4:77154447-77154466 MS.gene36967:CDS 25.0%
AAAGCTATAGCATTTGAATG+CGG + chr8.4:77156333-77156352 MS.gene36967:CDS 30.0%
AACTCAAAGAAGAAAAGAAG+TGG + chr8.4:77155768-77155787 MS.gene36967:CDS 30.0%
AACTTCACAACAAAACCAAT+TGG - chr8.4:77157281-77157300 None:intergenic 30.0%
ACTCACTTTGAATCAAATGA+AGG + chr8.4:77155482-77155501 MS.gene36967:CDS 30.0%
AGAAGAAGAATGTGTTTGAA+GGG + chr8.4:77157105-77157124 MS.gene36967:CDS 30.0%
CAAATTTCAACATGGATTCA+TGG - chr8.4:77155914-77155933 None:intergenic 30.0%
CAGAAAAAGCAATACTATCT+TGG + chr8.4:77155673-77155692 MS.gene36967:CDS 30.0%
GACAATGGTTTAACATTGTT+AGG + chr8.4:77156047-77156066 MS.gene36967:CDS 30.0%
GTGAATGTCAAAATGATTAC+AGG + chr8.4:77156140-77156159 MS.gene36967:CDS 30.0%
GTTCTTCAATTGATCAAAGA+AGG + chr8.4:77155570-77155589 MS.gene36967:CDS 30.0%
TCAAAATTTCACAACCATCA+TGG - chr8.4:77155881-77155900 None:intergenic 30.0%
TCAAATAGTACCTGTCTTAT+CGG - chr8.4:77155343-77155362 None:intergenic 30.0%
TGAGTTTAATGCAAGGAAAT+TGG + chr8.4:77157082-77157101 MS.gene36967:CDS 30.0%
TTAACATTGTTAGGACTTGT+CGG + chr8.4:77156056-77156075 MS.gene36967:CDS 30.0%
TTTGTTCCGGAAAACAAAAA+AGG - chr8.4:77154865-77154884 None:intergenic 30.0%
! AAATGAAGGTGACAAAGTTT+TGG + chr8.4:77155496-77155515 MS.gene36967:CDS 30.0%
! GATGTTGTTTGTTTGAAGAT+TGG + chr8.4:77154730-77154749 MS.gene36967:CDS 30.0%
! TTAATGGATAAAGAACCTGT+TGG + chr8.4:77156885-77156904 MS.gene36967:CDS 30.0%
! TTATTCAACCTTGTTTGCAA+AGG - chr8.4:77154991-77155010 None:intergenic 30.0%
!! AAATTGATTTGGTTCGAAGT+GGG + chr8.4:77154668-77154687 MS.gene36967:CDS 30.0%
!! TGAAAGAAACTTTTAGAAGG+TGG - chr8.4:77154427-77154446 None:intergenic 30.0%
!! TGAAAGCATTATTCAAGGTA+TGG + chr8.4:77155932-77155951 MS.gene36967:CDS 30.0%
!!! AAGTTGTTTTTGGGAATTGT+TGG + chr8.4:77157140-77157159 MS.gene36967:CDS 30.0%
!!! GATAGTATTGCTTTTTCTGT+TGG - chr8.4:77155672-77155691 None:intergenic 30.0%
AAGAAACTCCTTTGCAAACA+AGG + chr8.4:77154980-77154999 MS.gene36967:CDS 35.0%
ACAAATGAAACAGTGGTTGA+AGG + chr8.4:77156378-77156397 MS.gene36967:CDS 35.0%
ACAACCAAACTGTTTCACAT+TGG + chr8.4:77155814-77155833 MS.gene36967:CDS 35.0%
AGCTGATATTGGACTTTCAA+TGG + chr8.4:77156575-77156594 MS.gene36967:CDS 35.0%
AGGTGAAGTTAAATCAACCA+CGG - chr8.4:77154203-77154222 None:intergenic 35.0%
AGTTGAGAAAATCTCTGTGA+TGG + chr8.4:77156443-77156462 MS.gene36967:CDS 35.0%
ATATCAGCTTCTTTCAATGC+CGG - chr8.4:77156564-77156583 None:intergenic 35.0%
ATCGAATCAACAGAACAACA+AGG - chr8.4:77155062-77155081 None:intergenic 35.0%
ATGTGTTCCAAATACCATGA+TGG + chr8.4:77155864-77155883 MS.gene36967:CDS 35.0%
ATTGACACACTTCAGAAACA+TGG + chr8.4:77154277-77154296 MS.gene36967:CDS 35.0%
CAAACTGTTTCACATTGGAA+AGG + chr8.4:77155819-77155838 MS.gene36967:CDS 35.0%
CATACTTTATGTCTGATGAC+AGG + chr8.4:77156291-77156310 MS.gene36967:intron 35.0%
CTAATACTGAGAGGTTGAAT+TGG + chr8.4:77157213-77157232 MS.gene36967:CDS 35.0%
CTTTCCAATGTGAAACAGTT+TGG - chr8.4:77155821-77155840 None:intergenic 35.0%
GAGAAGAAGAATGTGTTTGA+AGG + chr8.4:77157104-77157123 MS.gene36967:CDS 35.0%
GATGTGATGAATGCAGTTAT+TGG + chr8.4:77155150-77155169 MS.gene36967:CDS 35.0%
GCATTGAAAGAAGCTGATAT+TGG + chr8.4:77156564-77156583 MS.gene36967:CDS 35.0%
GCTGATATTGGACTTTCAAT+GGG + chr8.4:77156576-77156595 MS.gene36967:CDS 35.0%
GGTGTTCACAAATTGAATTC+AGG + chr8.4:77155615-77155634 MS.gene36967:CDS 35.0%
GTTTCATTTGTGTCCTGATT+AGG - chr8.4:77156369-77156388 None:intergenic 35.0%
TACGAGAGTTTCTTGATCAA+TGG - chr8.4:77154236-77154255 None:intergenic 35.0%
TATGGATACATTAGGTGCAT+TGG + chr8.4:77156833-77156852 MS.gene36967:CDS 35.0%
TCAATTCGACAACAAGTGTT+TGG + chr8.4:77154382-77154401 MS.gene36967:CDS 35.0%
TGATCAATGGTAAAAGAGTG+AGG - chr8.4:77154223-77154242 None:intergenic 35.0%
TGCAAAAATGCTCGTTACAT+CGG + chr8.4:77154900-77154919 MS.gene36967:CDS 35.0%
TTCACAACCATCATGGTATT+TGG - chr8.4:77155874-77155893 None:intergenic 35.0%
! AAAGAGCATGGAATCAAAGA+AGG + chr8.4:77154526-77154545 MS.gene36967:CDS 35.0%
! AAGATGGTGGTAAAAGACAA+TGG + chr8.4:77156032-77156051 MS.gene36967:CDS 35.0%
! AATACTATCTTGGGCTGTTT+TGG + chr8.4:77155683-77155702 MS.gene36967:CDS 35.0%
! GAGCATTTTTGCATATCCAT+CGG - chr8.4:77154893-77154912 None:intergenic 35.0%
! TGGTTCAAGTTTGTGAACAA+GGG - chr8.4:77154037-77154056 None:intergenic 35.0%
! TGTTATAAATTTTGTCGCGG+CGG + chr8.4:77156755-77156774 MS.gene36967:CDS 35.0%
! TTGTTTGTGTTGTTGGTGTT+TGG - chr8.4:77154082-77154101 None:intergenic 35.0%
!! AGAAGTTTGCTAATACTGAG+AGG + chr8.4:77157204-77157223 MS.gene36967:CDS 35.0%
!! AGAGAGTGGATTGTTTGTAT+TGG + chr8.4:77157236-77157255 MS.gene36967:CDS 35.0%
!! ATCAAAGAAGGTTGGTATGA+TGG + chr8.4:77154538-77154557 MS.gene36967:CDS 35.0%
!! CAAATTGATTTGGTTCGAAG+TGG + chr8.4:77154667-77154686 MS.gene36967:CDS 35.0%
!! CTGTTGATTCGATATTTCAC+CGG + chr8.4:77155069-77155088 MS.gene36967:CDS 35.0%
!! GATTCTGAATTCGAGTTTTC+AGG + chr8.4:77155642-77155661 MS.gene36967:CDS 35.0%
!! TGTTGATTCGATATTTCACC+GGG + chr8.4:77155070-77155089 MS.gene36967:CDS 35.0%
!!! AGGTGGTTTTTTGTAAGTGT+TGG - chr8.4:77154410-77154429 None:intergenic 35.0%
!!! AGGTGTGATTTTTGGTTTCT+TGG - chr8.4:77154167-77154186 None:intergenic 35.0%
!!! GAAGTGGAGTTTTGTTGAAA+AGG + chr8.4:77155784-77155803 MS.gene36967:CDS 35.0%
!!! GGCTGTTTTGGAATTGAAAA+TGG + chr8.4:77155695-77155714 MS.gene36967:CDS 35.0%
!!! TATTTTTGGTGTGACTTCGA+AGG + chr8.4:77157010-77157029 MS.gene36967:CDS 35.0%
AAAATGCTCGTTACATCGGT+TGG + chr8.4:77154904-77154923 MS.gene36967:CDS 40.0%
AAAGTTACAGACGAAGAGCT+TGG + chr8.4:77155993-77156012 MS.gene36967:CDS 40.0%
AAATCAACCACGGTGAAAGA+TGG - chr8.4:77154193-77154212 None:intergenic 40.0%
AACGGAGTTAGAGAGTTCAA+CGG + chr8.4:77155108-77155127 MS.gene36967:CDS 40.0%
AATGATGGCTGATCAAGCAA+TGG + chr8.4:77155266-77155285 MS.gene36967:CDS 40.0%
ACTAACATCCTCAATCGGAA+AGG + chr8.4:77155011-77155030 MS.gene36967:CDS 40.0%
ACTTTCTGCATGTGAGACTA+TGG + chr8.4:77155296-77155315 MS.gene36967:CDS 40.0%
AGATGGAACAAATGATGCAC+CGG + chr8.4:77156542-77156561 MS.gene36967:CDS 40.0%
AGCATGGAATCAAAGAAGGT+TGG + chr8.4:77154530-77154549 MS.gene36967:CDS 40.0%
AGTGTCAATGTGACAGCTAA+TGG - chr8.4:77155228-77155247 None:intergenic 40.0%
CGGAATTCTTCAACCTAATC+AGG + chr8.4:77156353-77156372 MS.gene36967:CDS 40.0%
CTTTCTGCATGTGAGACTAT+GGG + chr8.4:77155297-77155316 MS.gene36967:CDS 40.0%
GAATATGCACCAACTTCCAT+TGG - chr8.4:77155534-77155553 None:intergenic 40.0%
GGACTTTCAATGGGAATTCA+AGG + chr8.4:77156585-77156604 MS.gene36967:CDS 40.0%
GTTGGTATGAACACAACATG+GGG + chr8.4:77154922-77154941 MS.gene36967:CDS 40.0%
TCAGGACACAAATGAAACAG+TGG + chr8.4:77156371-77156390 MS.gene36967:CDS 40.0%
TCCATCTACGAACAATCCAT+CGG - chr8.4:77154770-77154789 None:intergenic 40.0%
TTCGTCAATGTCGTTGCTTA+TGG - chr8.4:77154962-77154981 None:intergenic 40.0%
! ACAATTTGCACCGATAAGAC+AGG + chr8.4:77155330-77155349 MS.gene36967:CDS 40.0%
! AGTAAAGGTTTGTCTGAGAC+TGG - chr8.4:77157308-77157327 None:intergenic 40.0%
! GATGGAGTAGGTGTGATTTT+TGG - chr8.4:77154175-77154194 None:intergenic 40.0%
! GGAGTTGCTCTAAATACTAC+TGG + chr8.4:77155591-77155610 MS.gene36967:CDS 40.0%
! GGTTGGTATGAACACAACAT+GGG + chr8.4:77154921-77154940 MS.gene36967:CDS 40.0%
! GGTTTAGAACCAATGGAAGT+TGG + chr8.4:77155522-77155541 MS.gene36967:CDS 40.0%
! GTGGTTCAAGTTTGTGAACA+AGG - chr8.4:77154038-77154057 None:intergenic 40.0%
! GTTGCTCTAAATACTACTGG+TGG + chr8.4:77155594-77155613 MS.gene36967:CDS 40.0%
! GTTTGTGCTACTCTTTCACT+TGG + chr8.4:77154493-77154512 MS.gene36967:CDS 40.0%
!! AAAGAAGGTTGGTATGATGG+TGG + chr8.4:77154541-77154560 MS.gene36967:CDS 40.0%
!! ATTGGTGCTTCAAGTTGTGA+TGG + chr8.4:77157169-77157188 MS.gene36967:CDS 40.0%
!! CATTGAGAAGTGTCTCAATG+TGG - chr8.4:77154057-77154076 None:intergenic 40.0%
!! TTGGCTTGGTTTAGAACCAA+TGG + chr8.4:77155515-77155534 MS.gene36967:CDS 40.0%
!!! AAGGTGACAAAGTTTTGGCT+TGG + chr8.4:77155501-77155520 MS.gene36967:CDS 40.0%
!!! TTGGTTTTGCTGCTGTTTCT+TGG + chr8.4:77157255-77157274 MS.gene36967:CDS 40.0%
ACATCCTCAATCGGAAAGGT+TGG + chr8.4:77155015-77155034 MS.gene36967:CDS 45.0%
AGAGGTTGAATTGGAGAGAG+TGG + chr8.4:77157222-77157241 MS.gene36967:CDS 45.0%
AGATGGAGAGACGAACAAGA+TGG + chr8.4:77156016-77156035 MS.gene36967:CDS 45.0%
ATTAAGGATCCATGTCGTCC+AGG + chr8.4:77156080-77156099 MS.gene36967:CDS 45.0%
CAAACCAACCTTTCCGATTG+AGG - chr8.4:77155022-77155041 None:intergenic 45.0%
CGCAACGGAAAAACCTACTA+AGG + chr8.4:77156860-77156879 MS.gene36967:CDS 45.0%
GACACACTTCAGAAACATGG+TGG + chr8.4:77154280-77154299 MS.gene36967:CDS 45.0%
GCTACTCTTTCACTTGGCTT+TGG + chr8.4:77154499-77154518 MS.gene36967:CDS 45.0%
GGGAACACGAAGACTGATAA+CGG + chr8.4:77155090-77155109 MS.gene36967:CDS 45.0%
GGGAATTGTTGGTGTGACAT+TGG + chr8.4:77157151-77157170 MS.gene36967:CDS 45.0%
GTAGTTGCTGTAACTGGAGA+TGG + chr8.4:77156525-77156544 MS.gene36967:CDS 45.0%
GTTAGGACTTGTCGGCATTA+AGG + chr8.4:77156064-77156083 MS.gene36967:CDS 45.0%
GTTATCAGTCTTCGTGTTCC+CGG - chr8.4:77155091-77155110 None:intergenic 45.0%
TGACATTCACACCAGCATGT+TGG - chr8.4:77156130-77156149 None:intergenic 45.0%
! CAGAAACATGGTGGAGTTGA+AGG + chr8.4:77154289-77154308 MS.gene36967:CDS 45.0%
! CGGTTGGTATGAACACAACA+TGG + chr8.4:77154920-77154939 MS.gene36967:CDS 45.0%
! CTCAATCGGAAAGGTTGGTT+TGG + chr8.4:77155020-77155039 MS.gene36967:CDS 45.0%
! GTTGATGAATCGAGCATGAC+CGG + chr8.4:77154802-77154821 MS.gene36967:CDS 45.0%
! TCCATCGGCAACTTTTGTTC+CGG - chr8.4:77154878-77154897 None:intergenic 45.0%
!! AGAGGCTTTGTTCTACCAAC+AGG - chr8.4:77156903-77156922 None:intergenic 45.0%
!! GGCTTTGGAATCAAAGAGCA+TGG + chr8.4:77154514-77154533 MS.gene36967:CDS 45.0%
ACAGACGAAGAGCTTGGAGA+TGG + chr8.4:77155999-77156018 MS.gene36967:CDS 50.0%
ACAGCTAATGGCAAACCCTC+AGG - chr8.4:77155216-77155235 None:intergenic 50.0%
ACCACGGTGAAAGATGGAGT+AGG - chr8.4:77154187-77154206 None:intergenic 50.0%
ACCTACTCCATCTTTCACCG+TGG + chr8.4:77154183-77154202 MS.gene36967:CDS 50.0%
CAGCTAATGGCAAACCCTCA+GGG - chr8.4:77155215-77155234 None:intergenic 50.0%
CTCTACATGATCGCTCTCAC+CGG - chr8.4:77154824-77154843 None:intergenic 50.0%
GGTCACGTAGTTGCTGTAAC+TGG + chr8.4:77156519-77156538 MS.gene36967:CDS 50.0%
GTCGTTGTTGCTATCCCTGA+GGG + chr8.4:77155198-77155217 MS.gene36967:CDS 50.0%
GTTGAAGCTTGCCAACATGC+TGG + chr8.4:77156116-77156135 MS.gene36967:CDS 50.0%
TCCGGAACAAAAGTTGCCGA+TGG + chr8.4:77154874-77154893 MS.gene36967:CDS 50.0%
TCTACGAACAATCCATCGGC+TGG - chr8.4:77154766-77154785 None:intergenic 50.0%
TGGAGAGACGAACAAGATGG+TGG + chr8.4:77156019-77156038 MS.gene36967:CDS 50.0%
TGTCGTTGTTGCTATCCCTG+AGG + chr8.4:77155197-77155216 MS.gene36967:CDS 50.0%
TTGGAAAGGAGCAGCAGAGA+TGG + chr8.4:77155833-77155852 MS.gene36967:CDS 50.0%
!! GCCGATGGATTGTTCGTAGA+TGG + chr8.4:77154766-77154785 MS.gene36967:CDS 50.0%
!! GCTGCTGTTTCTTGGCCAAT+TGG + chr8.4:77157263-77157282 MS.gene36967:CDS 50.0%
CTTCACGCACGAAGAGAGGT+TGG + chr8.4:77156416-77156435 MS.gene36967:CDS 55.0%
GCAACTTCACGCACGAAGAG+AGG + chr8.4:77156412-77156431 MS.gene36967:CDS 55.0%
GGTGATCAAGTACCAGCCGA+TGG + chr8.4:77154751-77154770 MS.gene36967:CDS 55.0%
GTCTTCACTCCTGGACGACA+TGG - chr8.4:77156092-77156111 None:intergenic 55.0%
TCAACCGCTGTCTTCACTCC+TGG - chr8.4:77156101-77156120 None:intergenic 55.0%
TCGTCCAGGAGTGAAGACAG+CGG + chr8.4:77156094-77156113 MS.gene36967:CDS 55.0%
!! AGGTGCATTGGCTCTCGCAA+CGG + chr8.4:77156845-77156864 MS.gene36967:CDS 55.0%
TTTGTCGCGGCGGTTTCAGC+AGG + chr8.4:77156765-77156784 MS.gene36967:CDS 60.0%
!! TCGAAGTGGGCGCCGACAAA+AGG + chr8.4:77154681-77154700 MS.gene36967:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 77154025 77157358 77154025 ID=MS.gene36967
chr8.4 mRNA 77154025 77157358 77154025 ID=MS.gene36967.t1;Parent=MS.gene36967
chr8.4 exon 77154025 77155351 77154025 ID=MS.gene36967.t1.exon1;Parent=MS.gene36967.t1
chr8.4 CDS 77154025 77155351 77154025 ID=cds.MS.gene36967.t1;Parent=MS.gene36967.t1
chr8.4 exon 77155478 77156161 77155478 ID=MS.gene36967.t1.exon2;Parent=MS.gene36967.t1
chr8.4 CDS 77155478 77156161 77155478 ID=cds.MS.gene36967.t1;Parent=MS.gene36967.t1
chr8.4 exon 77156313 77157358 77156313 ID=MS.gene36967.t1.exon3;Parent=MS.gene36967.t1
chr8.4 CDS 77156313 77157358 77156313 ID=cds.MS.gene36967.t1;Parent=MS.gene36967.t1
Gene Sequence

>MS.gene36967

ATGTCAATGCCCTTGTTCACAAACTTGAACCACATTGAGACACTTCTCAATGCACCAAACACCAACAACACAAACAATATAAGATGGCACAATGCCTTCATGACAATATATTGTTCTAGGGCTTTCATGTCACGTTCTACCAAGAAACCAAAAATCACACCTACTCCATCTTTCACCGTGGTTGATTTAACTTCACCTCACTCTTTTACCATTGATCAAGAAACTCTCGTAGATATTGTCAAAGAGAAAAACATTGACACACTTCAGAAACATGGTGGAGTTGAAGGTGTTGCTTCATCACTTAAAACTAACATTGAGTTTGGTATCAAAAGTCATGATGATGATTTTCAAGACATTTCAATTCGACAACAAGTGTTTGGTTCCAACACTTACAAAAAACCACCTTCTAAAAGTTTCTTTCATTTTGTTGTTGAAGCTTTTAAGGATTTAACAATTCTTATTCTTTTGGTTTGTGCTACTCTTTCACTTGGCTTTGGAATCAAAGAGCATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCCGTTTTCATTGTTATTTCATTGTCTGCAATAAGCAACTTTAAACAAAACAAACAATTTGATAAATTGTCTCAAGTGAGCAATGATATTCAAATTGATTTGGTTCGAAGTGGGCGCCGACAAAAGGTATCAATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCAGCCGATGGATTGTTCGTAGATGGACATTCATTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGCGATCATGTAGAGATTAATCAAAACTTTCATCCTTTTTTGTTTTCCGGAACAAAAGTTGCCGATGGATATGCAAAAATGCTCGTTACATCGGTTGGTATGAACACAACATGGGGACAAATGATGAGTTCCATAAGCAACGACATTGACGAAGAAACTCCTTTGCAAACAAGGTTGAATAAACTAACATCCTCAATCGGAAAGGTTGGTTTGGTTGTCGCATTTTTAGTCCTTGTTGTTCTGTTGATTCGATATTTCACCGGGAACACGAAGACTGATAACGGAGTTAGAGAGTTCAACGGTAGAAAGACTAGTTTTGATGATGTGATGAATGCAGTTATTGGAATTATTGCTGATGCTGTTACTATTGTCGTTGTTGCTATCCCTGAGGGTTTGCCATTAGCTGTCACATTGACACTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGAAAACTTTCTGCATGTGAGACTATGGGATCAGCTACTACAATTTGCACCGATAAGACAGGTACTATTTGAAATACAAAATTTAGTTATATTCTGTTAATAGATATTTAATTTATTGATTCTTGACTTACTCTTTATACATAGAATATTTCACACATACTCACTTTGATCATGTGATTTGTAATAGGTACACTCACTTTGAATCAAATGAAGGTGACAAAGTTTTGGCTTGGTTTAGAACCAATGGAAGTTGGTGCATATTCAAATGTTGATCCATATGTTCTTCAATTGATCAAAGAAGGAGTTGCTCTAAATACTACTGGTGGTGTTCACAAATTGAATTCAGGTTCTGATTCTGAATTCGAGTTTTCAGGTAGCCCAACAGAAAAAGCAATACTATCTTGGGCTGTTTTGGAATTGAAAATGGATATGGAGCACTTGACAAAAAGCTGTTCTATTCTTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAAAAGGAATGTTGACAACCAAACTGTTTCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCCAAATACCATGATGGTTGTGAAATTTTGAAAGATCTTGACCATGAATCCATGTTGAAATTTGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTAGCGTATAGAAAAGTTACAGACGAAGAGCTTGGAGATGGAGAGACGAACAAGATGGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTCGGCATTAAGGATCCATGTCGTCCAGGAGTGAAGACAGCGGTTGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTATTACTAAAATATCTTATTTATCGATAACTTGATAACATAAAATCTCTATTTATACATACGAGTCTATATGAAAATGATGAAGATAATAAGAATAATTAACCTAACTAATTGTTAATTAACCATTAACATACTTTATGTCTGATGACAGGTGACAATATTTTCACTGCAAAAGCTATAGCATTTGAATGCGGAATTCTTCAACCTAATCAGGACACAAATGAAACAGTGGTTGAAGGTGAACAATTTCGCAACTTCACGCACGAAGAGAGGTTGGAAAAAGTTGAGAAAATCTCTGTGATGGCAAGATCTTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTAAAAGAAAAAGGTCACGTAGTTGCTGTAACTGGAGATGGAACAAATGATGCACCGGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACTGAAGTAGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTATAAATTGGGGAAGATGTGTTTACAACAACATTCAGAAATTCATTCAATTTCAATTAACAGTGAATGTGGCAGCACTTGTTATAAATTTTGTCGCGGCGGTTTCAGCAGGTGAAGTTCCATTAACAGCAGTTCAATTATTATGGGTGAATTTGATTATGGATACATTAGGTGCATTGGCTCTCGCAACGGAAAAACCTACTAAGGATTTAATGGATAAAGAACCTGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTTTGTCACAAGCTTTGTACCAAATAGTAATTTTATTAACTCTTCAGTTTAAAGGTGAGACTATTTTTGGTGTGACTTCGAAGGTAAATGACACATTGATATTCAATACATTTGTTCTTTGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGCAAGTTGTTTTTGGGAATTGTTGGTGTGACATTGGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTAATACTGAGAGGTTGAATTGGAGAGAGTGGATTGTTTGTATTGGTTTTGCTGCTGTTTCTTGGCCAATTGGTTTTGTTGTGAAGTTTATACCAGTCTCAGACAAACCTTTACTTGATTTCTTGAATTTTAGGAAGAGATATTGA
Protein sequence

>MS.gene36967.t1

MSMPLFTNLNHIETLLNAPNTNNTNNIRWHNAFMTIYCSRAFMSRSTKKPKITPTPSFTVVDLTSPHSFTIDQETLVDIVKEKNIDTLQKHGGVEGVASSLKTNIEFGIKSHDDDFQDISIRQQVFGSNTYKKPPSKSFFHFVVEAFKDLTILILLVCATLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISLSAISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFDIVVGDVVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEINQNFHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLIRYFTGNTKTDNGVREFNGRKTSFDDVMNAVIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPMEVGAYSNVDPYVLQLIKEGVALNTTGGVHKLNSGSDSEFEFSGSPTEKAILSWAVLELKMDMEHLTKSCSILQVETFNSKKKRSGVLLKRNVDNQTVSHWKGAAEMVLRMCSKYHDGCEILKDLDHESMLKFESIIQGMAASSLRCIALAYRKVTDEELGDGETNKMVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILQPNQDTNETVVEGEQFRNFTHEERLEKVEKISVMARSSPFDKLLMVQCLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVINWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKDLMDKEPVGRTKPLITNIMWRNLLSQALYQIVILLTLQFKGETIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGVTLVLQVVMVEFLKKFANTERLNWREWIVCIGFAAVSWPIGFVVKFIPVSDKPLLDFLNFRKRY