AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059303


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059303.t1 MTR_2g087890 97.083 480 14 0 1 480 1 480 0.0 956
MS.gene059303.t1 MTR_1g021652 40.741 459 266 4 9 464 44 499 1.00e-123 371
MS.gene059303.t1 MTR_3g111530 39.451 474 271 7 20 480 88 558 2.21e-116 353
MS.gene059303.t1 MTR_1g034320 39.030 474 268 8 22 479 14 482 1.57e-107 328
MS.gene059303.t1 MTR_4g068550 37.124 466 279 7 12 469 1 460 8.67e-104 318
MS.gene059303.t1 MTR_1g034330 37.014 489 281 9 10 479 6 486 9.78e-104 318
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059303.t1 AT4G15440 60.677 384 147 3 101 480 1 384 4.39e-170 484
MS.gene059303.t1 AT5G42650 41.703 458 261 3 10 464 39 493 2.03e-125 375

Find 142 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACCTGCACACTGTTTAT+TGG 0.128108 2.2:+11313580 None:intergenic
CAGACAGGTTAGATTATTTC+TGG 0.141000 2.2:-11317811 MS.gene059303:CDS
TTGAATTTACGGGAAATATT+AGG 0.183729 2.2:-11317580 MS.gene059303:CDS
GTTATGCTCTCAATCAATTT+TGG 0.194984 2.2:+11313980 None:intergenic
CGTCGGTATGATTTAATTAA+AGG 0.200247 2.2:-11313512 MS.gene059303:CDS
AACTATTTGTATTGGTCTAA+TGG 0.210824 2.2:-11313629 MS.gene059303:CDS
GGAGCCTGATTCGGCGATTT+TGG 0.224744 2.2:+11314471 None:intergenic
TTTCTCTCACCTCTTTGATA+TGG 0.280521 2.2:-11317651 MS.gene059303:CDS
TGTTCCTAGTGTTGAATTTA+CGG 0.291492 2.2:-11317591 MS.gene059303:CDS
TCAAGAACTGCAATAATATT+AGG 0.294757 2.2:+11317683 None:intergenic
TGAAGCAAAGTTCAAGCATA+TGG 0.300137 2.2:-11314648 MS.gene059303:CDS
CCACCGGTTCCACTTCAATT+TGG 0.305118 2.2:-11313824 MS.gene059303:CDS
GCTACCGATCCGGCAGATTC+CGG 0.308018 2.2:-11317867 MS.gene059303:CDS
TGAATTTACGGGAAATATTA+GGG 0.330709 2.2:-11317579 MS.gene059303:CDS
GACGGTGGTGGTATCGGTGG+TGG 0.334671 2.2:+11317923 None:intergenic
ACTTTGCTTCAAAATGTTCA+TGG 0.334862 2.2:+11314660 None:intergenic
ACTATTTGTATTGGTCTAAT+GGG 0.337855 2.2:-11313628 MS.gene059303:CDS
TAGACAGTGTTGCTTCAATT+TGG 0.347494 2.2:+11314587 None:intergenic
TCCAGGTTTGATATCAGTTC+TGG 0.348706 2.2:+11314622 None:intergenic
AGCTCCGTTGGCCTTGCTTT+CGG 0.351852 2.2:+11317887 None:intergenic
GTCGGTATGATTTAATTAAA+GGG 0.360322 2.2:-11313511 MS.gene059303:CDS
CGTTCCGGTTTAAATTGTTC+TGG 0.360380 2.2:+11313683 None:intergenic
ACCAACCCTAACTCTTCATT+TGG 0.361089 2.2:+11313457 None:intergenic
TTCTCTTTAGTGAACCGTTC+CGG 0.366646 2.2:+11313668 None:intergenic
AATGGCCATCCGTGGCTTCC+CGG 0.370701 2.2:+11317848 None:intergenic
GTTCCTAGTGTTGAATTTAC+GGG 0.375540 2.2:-11317590 MS.gene059303:CDS
GTGTTGGGTTTCAACTCATA+TGG 0.377271 2.2:-11314022 MS.gene059303:CDS
GATCCCAAAATCGCCGAATC+AGG 0.380571 2.2:-11314475 MS.gene059303:CDS
GAGAAAGGCGGTTCAACTCT+TGG 0.381113 2.2:-11313911 MS.gene059303:CDS
ATAATCTAACCTGTCTGATA+AGG 0.382700 2.2:+11317817 None:intergenic
TTGCTTTCGGTGGAGTTGCT+AGG 0.382888 2.2:+11317900 None:intergenic
AGTTATTGAACTATTTGTAT+TGG 0.390965 2.2:-11313637 MS.gene059303:CDS
GGAAAATTTCTTCAAGTGGT+TGG 0.395637 2.2:+11314389 None:intergenic
GAACCGGTGGGTTCATTCGC+AGG 0.400858 2.2:+11313837 None:intergenic
CTACCGATCCGGCAGATTCC+GGG 0.403146 2.2:-11317866 MS.gene059303:CDS
AGCATAACGAACGGTCCAAC+CGG 0.423269 2.2:-11313965 MS.gene059303:CDS
AGAGTTGGAACTAATAAATT+CGG 0.427670 2.2:-11313873 MS.gene059303:CDS
AGAAAGGCGGTTCAACTCTT+GGG 0.427891 2.2:-11313910 MS.gene059303:CDS
TGGTCTAATGGGCCACAAAC+TGG 0.430261 2.2:-11313617 MS.gene059303:CDS
TAATCTAACCTGTCTGATAA+GGG 0.445035 2.2:+11317818 None:intergenic
TCTTCATTTGGCCTTCTGTA+AGG 0.448353 2.2:+11313469 None:intergenic
GGATTCACGTTGGTGAAGAA+AGG 0.453342 2.2:+11317704 None:intergenic
TCTCAACTTCTCTTGCAAAC+CGG 0.454849 2.2:+11313946 None:intergenic
CATAAGGGTAAGAGAAGGAA+TGG 0.459434 2.2:+11314365 None:intergenic
GGCCTTCTGTAAGGCAGTAA+TGG 0.459616 2.2:+11313478 None:intergenic
GACAAAAGAGATGTTCTAGT+TGG 0.460373 2.2:-11317620 MS.gene059303:CDS
GAAGCAAAGTTCAAGCATAT+GGG 0.463109 2.2:-11314647 MS.gene059303:CDS
GCTAGGGACGGTGGTGGTAT+CGG 0.463818 2.2:+11317917 None:intergenic
TGCTTTCGGTGGAGTTGCTA+GGG 0.468309 2.2:+11317901 None:intergenic
CAATAAACAGTGTGCAGGTA+AGG 0.471780 2.2:-11313579 MS.gene059303:CDS
TGAACCAGAACAATTTAAAC+CGG 0.473665 2.2:-11313687 MS.gene059303:CDS
ATCAAGGGAAGGATCGGCTC+TGG 0.474506 2.2:+11314495 None:intergenic
TACCCTTATGCTCTTGTCAG+TGG 0.477774 2.2:-11314352 MS.gene059303:CDS
CGACCAAATTGAAGTGGAAC+CGG 0.478711 2.2:+11313821 None:intergenic
CTCCGCGTTCAATGTGAAGA+AGG 0.479052 2.2:-11313765 MS.gene059303:CDS
GTTTGACTCGTTAAAAGAGT+TGG 0.480961 2.2:-11313888 MS.gene059303:CDS
TCTCCACTGACAAGAGCATA+AGG 0.482167 2.2:+11314349 None:intergenic
GAGCATGGAGGAGCCTGATT+CGG 0.489708 2.2:+11314462 None:intergenic
AATTTCTTCAAGTGGTTGGA+TGG 0.492899 2.2:+11314393 None:intergenic
AGAAAGGAAGCAAGAGAGAA+AGG 0.493653 2.2:-11313926 MS.gene059303:CDS
GGCCAACGGAGCTACCGATC+CGG 0.494027 2.2:-11317877 MS.gene059303:CDS
GCTCCTCCATGCTCAACAAA+TGG 0.496661 2.2:-11314453 MS.gene059303:CDS
CACTGTTTATTGGACACAGT+TGG 0.496951 2.2:+11313590 None:intergenic
CTCTGGCAAGTACTTTGCTT+AGG 0.499755 2.2:+11314512 None:intergenic
TGCGAGCCATTTGTTGAGCA+TGG 0.501636 2.2:+11314447 None:intergenic
CGTGGCTTCCCGGAATCTGC+CGG 0.503229 2.2:+11317858 None:intergenic
TGCTAGGTCCCTTATCAGAC+AGG 0.504652 2.2:-11317826 MS.gene059303:CDS
TGGGTTTCAACTCATATGGT+GGG 0.510542 2.2:-11314018 MS.gene059303:CDS
TGCCGGATCGGTAGCTCCGT+TGG 0.513185 2.2:+11317875 None:intergenic
TTCGGTGGAGTTGCTAGGGA+CGG 0.513266 2.2:+11317905 None:intergenic
TTTACGGGAAATATTAGGGT+TGG 0.514210 2.2:-11317575 MS.gene059303:CDS
ACGGTGGTGGTATCGGTGGT+GGG 0.518078 2.2:+11317924 None:intergenic
CTGGCTCGACCAAATTGAAG+TGG 0.519831 2.2:+11313815 None:intergenic
GATTCACGTTGGTGAAGAAA+GGG 0.521739 2.2:+11317705 None:intergenic
AGAAGGGTGAGTTATTATGT+GGG 0.524535 2.2:-11313748 MS.gene059303:CDS
AACTTCTCTTGCAAACCGGT+TGG 0.526019 2.2:+11313950 None:intergenic
GTGAACAGAAATTTCTGCAG+TGG 0.528197 2.2:+11314538 None:intergenic
TGGAGGAAAATTTCTTCAAG+TGG 0.532590 2.2:+11314385 None:intergenic
TTGGGTTTCAACTCATATGG+TGG 0.534485 2.2:-11314019 MS.gene059303:CDS
TTTGCAAGAGAAGTTGAGAA+AGG 0.535515 2.2:-11313942 MS.gene059303:CDS
TCCGTTGGCCTTGCTTTCGG+TGG 0.541082 2.2:+11317890 None:intergenic
TATGATTTAATTAAAGGGGA+TGG 0.541669 2.2:-11313506 MS.gene059303:CDS
CACAATCAACGCAGCGGTGA+AGG 0.542968 2.2:+11313547 None:intergenic
AGCCACGGATGGCCATTGCT+AGG 0.543267 2.2:-11317842 MS.gene059303:CDS
CTTCCCGGAATCTGCCGGAT+CGG 0.543367 2.2:+11317863 None:intergenic
AGGGACGGTGGTGGTATCGG+TGG 0.543609 2.2:+11317920 None:intergenic
TTCTGAACCTCAACATGCTA+AGG 0.543924 2.2:-11317537 MS.gene059303:intron
TCTGGTTCATCAAACACGAC+CGG 0.544589 2.2:+11313701 None:intergenic
AAGAAGGGTGAGTTATTATG+TGG 0.548271 2.2:-11313749 MS.gene059303:CDS
GTTGTTTAATGAAGTTGTAG+AGG 0.549200 2.2:+11314317 None:intergenic
CTTCACCGCTGCGTTGATTG+TGG 0.549965 2.2:-11313546 MS.gene059303:CDS
TGAACAGAAATTTCTGCAGT+GGG 0.551534 2.2:+11314539 None:intergenic
GGAGTTGCTAGGGACGGTGG+TGG 0.552416 2.2:+11317911 None:intergenic
TTTGGGATCAAGGGAAGGAT+CGG 0.552953 2.2:+11314489 None:intergenic
ACCAGAACTGATATCAAACC+TGG 0.557853 2.2:-11314623 MS.gene059303:CDS
GGTTTCAGAAGCTTGTAATG+AGG 0.560783 2.2:-11313727 MS.gene059303:CDS
TTTCCCGTAAATTCAACACT+AGG 0.562457 2.2:+11317587 None:intergenic
CGGCAGATTCCGGGAAGCCA+CGG 0.563660 2.2:-11317857 MS.gene059303:CDS
CTCCACTGACAAGAGCATAA+GGG 0.568207 2.2:+11314350 None:intergenic
AACCGGTGGGTTCATTCGCA+GGG 0.568675 2.2:+11313838 None:intergenic
TTCCATTACTGCCTTACAGA+AGG 0.570694 2.2:-11313480 MS.gene059303:CDS
GTTGGAACTAATAAATTCGG+TGG 0.571940 2.2:-11313870 MS.gene059303:CDS
GAACGGTTCACTAAAGAGAA+AGG 0.572715 2.2:-11313665 MS.gene059303:CDS
AGTGGTACCTTAGCATGTTG+AGG 0.575238 2.2:+11317530 None:intergenic
GTGTCCAATAAACAGTGTGC+AGG 0.576661 2.2:-11313584 MS.gene059303:CDS
TCGGTATGATTTAATTAAAG+GGG 0.578026 2.2:-11313510 MS.gene059303:CDS
AGGGAACGTGGGTGGAACAT+TGG 0.578719 2.2:+11317724 None:intergenic
CTGGTTCATCAAACACGACC+GGG 0.580825 2.2:+11313702 None:intergenic
AAGAGCATAAGGGTAAGAGA+AGG 0.584245 2.2:+11314360 None:intergenic
ACAGTTGGCGAACCAGTTTG+TGG 0.585878 2.2:+11313605 None:intergenic
AAGGGTAAGAGAAGGAATGG+AGG 0.585930 2.2:+11314368 None:intergenic
GTTTCAGAAGCTTGTAATGA+GGG 0.587067 2.2:-11313726 MS.gene059303:CDS
TAGCAACTCCACCGAAAGCA+AGG 0.588271 2.2:-11317898 MS.gene059303:CDS
GGTGGAGTTGCTAGGGACGG+TGG 0.594020 2.2:+11317908 None:intergenic
TCTGATAAGGGACCTAGCAA+TGG 0.603682 2.2:+11317830 None:intergenic
AGATTCCGGGAAGCCACGGA+TGG 0.603980 2.2:-11317853 MS.gene059303:CDS
TTGTGGCACACTTGTTACGT+CGG 0.612333 2.2:-11313529 MS.gene059303:CDS
TATCGGTGGTGGGAGTGACA+TGG 0.613140 2.2:+11317934 None:intergenic
CCAAATTGAAGTGGAACCGG+TGG 0.613875 2.2:+11313824 None:intergenic
TCCGCGTTCAATGTGAAGAA+GGG 0.615898 2.2:-11313764 MS.gene059303:CDS
TCCACCGAAAGCAAGGCCAA+CGG 0.616945 2.2:-11317891 MS.gene059303:CDS
CAGAACAATTTAAACCGGAA+CGG 0.632046 2.2:-11313682 MS.gene059303:CDS
ACGTGGGTGGAACATTGGTA+CGG 0.634090 2.2:+11317729 None:intergenic
GACCTAGCAATGGCCATCCG+TGG 0.636484 2.2:+11317840 None:intergenic
GTGAAGAAAGGGAACGTGGG+TGG 0.642657 2.2:+11317716 None:intergenic
CAACAAGGTCCATATCAAAG+AGG 0.642799 2.2:+11317642 None:intergenic
AATAATATTAGGATTCACGT+TGG 0.648803 2.2:+11317694 None:intergenic
GTTGGTGAAGAAAGGGAACG+TGG 0.649752 2.2:+11317712 None:intergenic
CTTCTACCGACTGTGAGTGT+CGG 0.652078 2.2:-11314418 MS.gene059303:CDS
AACCCTGCGAATGAACCCAC+CGG 0.654342 2.2:-11313840 MS.gene059303:CDS
ATACAAATAGTTCAATAACT+CGG 0.658718 2.2:+11313640 None:intergenic
ACCCTTCTTCACATTGAACG+CGG 0.658842 2.2:+11313763 None:intergenic
TACAACTTCATTAAACAACA+TGG 0.659594 2.2:-11314313 MS.gene059303:intron
GAAGCTTGTAATGAGGGACC+CGG 0.667156 2.2:-11313720 MS.gene059303:CDS
CAAATTGAAGTGGAACCGGT+GGG 0.672914 2.2:+11313825 None:intergenic
TTGATTGAGAGCATAACGAA+CGG 0.681802 2.2:-11313974 MS.gene059303:CDS
AAGGAAGCAAGAGAGAAAGG+CGG 0.704473 2.2:-11313923 MS.gene059303:CDS
GAGCCATTTGTTGAGCATGG+AGG 0.708844 2.2:+11314450 None:intergenic
TTGGTGAAGAAAGGGAACGT+GGG 0.709718 2.2:+11317713 None:intergenic
ATGGTGCCGACACTCACAGT+CGG 0.714178 2.2:+11314412 None:intergenic
GTGTGCCACAATCAACGCAG+CGG 0.735438 2.2:+11313541 None:intergenic
GAACAGAAATTTCTGCAGTG+GGG 0.775291 2.2:+11314540 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTCATAAATTAAATTAAA+TGG - chr2.2:11315669-11315688 MS.gene059303:intron 10.0%
!! TTTACTTGATTTATTATTTA+AGG - chr2.2:11315101-11315120 MS.gene059303:intron 10.0%
!!! AAATTGTAAAAATTTTTATG+AGG - chr2.2:11314494-11314513 MS.gene059303:CDS 10.0%
!!! ATTATTTATTGTACTTTTTT+CGG - chr2.2:11315229-11315248 MS.gene059303:intron 10.0%
!!! ATTTCAATAAAAATTTTGTT+TGG + chr2.2:11315730-11315749 None:intergenic 10.0%
!!! CAATAACTATTTTTTTTATA+AGG - chr2.2:11314734-11314753 MS.gene059303:intron 10.0%
!!! TATTATATTTTGACAAAAAT+TGG - chr2.2:11315323-11315342 MS.gene059303:intron 10.0%
!!! TTTCTAGTTAAAAAATTTAA+CGG - chr2.2:11315158-11315177 MS.gene059303:intron 10.0%
!! ACATTAAAATGATATGTTAA+TGG + chr2.2:11314868-11314887 None:intergenic 15.0%
!! ATGATTAATAAGTAAACTAA+AGG - chr2.2:11315883-11315902 MS.gene059303:intron 15.0%
!! GACTATTTATTATAAATTCA+AGG - chr2.2:11314961-11314980 MS.gene059303:intron 15.0%
!! TATCAAAAAAACATTATGTA+CGG - chr2.2:11314462-11314481 MS.gene059303:CDS 15.0%
!!! AATGTTTTTACATTACAATA+CGG + chr2.2:11315842-11315861 None:intergenic 15.0%
!!! AATTGATAGAAAGATATTTT+TGG - chr2.2:11316223-11316242 MS.gene059303:intron 15.0%
!!! GATTTTAAAATAATTTGTAG+GGG + chr2.2:11315432-11315451 None:intergenic 15.0%
!!! GGATTTTAAAATAATTTGTA+GGG + chr2.2:11315433-11315452 None:intergenic 15.0%
!!! TAATAAACAATATTGATAAC+AGG - chr2.2:11317289-11317308 MS.gene059303:intron 15.0%
!!! TATTTTCAAATTTTAGTGAT+GGG - chr2.2:11315370-11315389 MS.gene059303:intron 15.0%
!!! TGGATTTTAAAATAATTTGT+AGG + chr2.2:11315434-11315453 None:intergenic 15.0%
!!! TTATTTTCAAATTTTAGTGA+TGG - chr2.2:11315369-11315388 MS.gene059303:intron 15.0%
!! AAAAAAATTGAAAAGTTGTG+AGG + chr2.2:11316272-11316291 None:intergenic 20.0%
!! AAAATGACAAGGAAAATTTA+TGG + chr2.2:11314044-11314063 None:intergenic 20.0%
!! AAATATTGCATAATATTCAG+AGG - chr2.2:11316619-11316638 MS.gene059303:intron 20.0%
!! AATGACATCTTACATATTTA+AGG - chr2.2:11314198-11314217 MS.gene059303:intron 20.0%
!! AGTTATTGAACTATTTGTAT+TGG - chr2.2:11317767-11317786 MS.gene059303:CDS 20.0%
!! ATACAAATAGTTCAATAACT+CGG + chr2.2:11317767-11317786 None:intergenic 20.0%
!! ATAGGATAGTTATGATTAAT+TGG - chr2.2:11314327-11314346 MS.gene059303:CDS 20.0%
!! ATCAAAAAAACATTATGTAC+GGG - chr2.2:11314463-11314482 MS.gene059303:CDS 20.0%
!! ATCAAAAGAAATAAGAAAGT+AGG + chr2.2:11313909-11313928 None:intergenic 20.0%
!! ATTGACAAAAATGGTAAAAT+TGG + chr2.2:11315454-11315473 None:intergenic 20.0%
!! TAGTTAAAAAATTTAACGGT+AGG - chr2.2:11315162-11315181 MS.gene059303:intron 20.0%
!! TATGAAATATTAATCTGCAT+GGG - chr2.2:11314439-11314458 MS.gene059303:CDS 20.0%
!! TATGAACTGGTAATTAAAAT+TGG + chr2.2:11316599-11316618 None:intergenic 20.0%
!! TTAAAATGATATGTTAATGG+TGG + chr2.2:11314865-11314884 None:intergenic 20.0%
!! TTATGAAATATTAATCTGCA+TGG - chr2.2:11314438-11314457 MS.gene059303:CDS 20.0%
!!! AAGATATTTTTGTTATCGTA+TGG - chr2.2:11315043-11315062 MS.gene059303:intron 20.0%
!!! AATTTTACCCTTTATATCAT+TGG + chr2.2:11316009-11316028 None:intergenic 20.0%
!!! ATAAGTCTATGATTTTTATG+AGG - chr2.2:11314398-11314417 MS.gene059303:CDS 20.0%
!!! ATCATAGATCAATTTCATTT+TGG - chr2.2:11315785-11315804 MS.gene059303:intron 20.0%
!!! ATGTTTTTACATTACAATAC+GGG + chr2.2:11315841-11315860 None:intergenic 20.0%
!!! ATTTTCAAATTTTAGTGATG+GGG - chr2.2:11315371-11315390 MS.gene059303:intron 20.0%
!!! TAGAAAACCTTAAATTTTGT+CGG + chr2.2:11315144-11315163 None:intergenic 20.0%
!!! TCATAGATCAATTTCATTTT+GGG - chr2.2:11315786-11315805 MS.gene059303:intron 20.0%
!!! TTATGCAATATTTTATGAAC+TGG + chr2.2:11316612-11316631 None:intergenic 20.0%
!!! TTCTTTTGTTAGTAATTGTA+TGG + chr2.2:11314134-11314153 None:intergenic 20.0%
!!! TTTAATTTATGAAAGAACCA+AGG + chr2.2:11315664-11315683 None:intergenic 20.0%
!!! TTTTTTTCCGACAAAATTTA+AGG - chr2.2:11315134-11315153 MS.gene059303:intron 20.0%
! AAAAGAAATAAGAAAGTAGG+TGG + chr2.2:11313906-11313925 None:intergenic 25.0%
! AAGAACCAGAAAAATTGAAA+TGG - chr2.2:11315937-11315956 MS.gene059303:intron 25.0%
! AATAATATTAGGATTCACGT+TGG + chr2.2:11313713-11313732 None:intergenic 25.0%
! AGAGTTGGAACTAATAAATT+CGG - chr2.2:11317531-11317550 MS.gene059303:intron 25.0%
! ATTTGAACAACAAAATGACA+AGG + chr2.2:11314055-11314074 None:intergenic 25.0%
! CTGAGACAAATTGTAAAAAA+AGG - chr2.2:11314583-11314602 MS.gene059303:CDS 25.0%
! GTCGGTATGATTTAATTAAA+GGG - chr2.2:11317893-11317912 MS.gene059303:CDS 25.0%
! GTGAAATCCAATGATATAAA+GGG - chr2.2:11315999-11316018 MS.gene059303:intron 25.0%
! TACAACTTCATTAAACAACA+TGG - chr2.2:11317091-11317110 MS.gene059303:intron 25.0%
! TATCTTTCTATCAATTGTCA+TGG + chr2.2:11316219-11316238 None:intergenic 25.0%
! TATGATTTAATTAAAGGGGA+TGG - chr2.2:11317898-11317917 MS.gene059303:CDS 25.0%
! TCAAGAACTGCAATAATATT+AGG + chr2.2:11313724-11313743 None:intergenic 25.0%
! TCGAGAGATTTCAAATAATA+CGG + chr2.2:11316177-11316196 None:intergenic 25.0%
! TCGGTATGATTTAATTAAAG+GGG - chr2.2:11317894-11317913 MS.gene059303:CDS 25.0%
! TGAATTTACGGGAAATATTA+GGG - chr2.2:11313825-11313844 MS.gene059303:CDS 25.0%
! TTGAATTTACGGGAAATATT+AGG - chr2.2:11313824-11313843 MS.gene059303:CDS 25.0%
!! AACAATATTGATAACAGGTA+AGG - chr2.2:11317294-11317313 MS.gene059303:intron 25.0%
!! AACTATTTGTATTGGTCTAA+TGG - chr2.2:11317775-11317794 MS.gene059303:CDS 25.0%
!! ACTATTTGTATTGGTCTAAT+GGG - chr2.2:11317776-11317795 MS.gene059303:CDS 25.0%
!! AGATTTTCTTCTTACTTGTA+GGG - chr2.2:11316030-11316049 MS.gene059303:intron 25.0%
!! ATATGACTGTATTTCTATTG+TGG + chr2.2:11316651-11316670 None:intergenic 25.0%
!! CATAGATCAATTTCATTTTG+GGG - chr2.2:11315787-11315806 MS.gene059303:intron 25.0%
!! TTTTCACATCATTATTTGCT+GGG + chr2.2:11317239-11317258 None:intergenic 25.0%
!! TTTTTCACATCATTATTTGC+TGG + chr2.2:11317240-11317259 None:intergenic 25.0%
!!! CAAATGTATCTTTAGTTTGT+CGG - chr2.2:11314070-11314089 MS.gene059303:CDS 25.0%
AAATACAAGCCTTGAAACAA+TGG + chr2.2:11316123-11316142 None:intergenic 30.0%
AAATGTTTCCGAAAACCAAA+CGG + chr2.2:11316468-11316487 None:intergenic 30.0%
AAATTGAAAAGTTGTGAGGA+TGG + chr2.2:11316268-11316287 None:intergenic 30.0%
AACTTTATCTGCGAGTTTAA+AGG - chr2.2:11316345-11316364 MS.gene059303:intron 30.0%
AATACAAGCCTTGAAACAAT+GGG + chr2.2:11316122-11316141 None:intergenic 30.0%
ACTTTATCTGCGAGTTTAAA+GGG - chr2.2:11316346-11316365 MS.gene059303:intron 30.0%
ACTTTGCTTCAAAATGTTCA+TGG + chr2.2:11316747-11316766 None:intergenic 30.0%
AGTATAAGTGTATGGGTATA+TGG - chr2.2:11316058-11316077 MS.gene059303:intron 30.0%
ATAAAAAATGGAACGGAGTT+CGG - chr2.2:11317322-11317341 MS.gene059303:intron 30.0%
ATAATCTAACCTGTCTGATA+AGG + chr2.2:11313590-11313609 None:intergenic 30.0%
ATGGTATAATTTCCTAGTGA+TGG - chr2.2:11316077-11316096 MS.gene059303:intron 30.0%
ATTCGTAGATGCAAAATTGA+AGG - chr2.2:11315859-11315878 MS.gene059303:intron 30.0%
ATTTGTACCAACATAGTTAC+AGG + chr2.2:11315610-11315629 None:intergenic 30.0%
CAAAATATCCCATTGTTTCA+AGG - chr2.2:11316111-11316130 MS.gene059303:intron 30.0%
CAGAAAAATTGAAATGGTGA+AGG - chr2.2:11315943-11315962 MS.gene059303:intron 30.0%
CGAGAGATTTCAAATAATAC+GGG + chr2.2:11316176-11316195 None:intergenic 30.0%
CGTCGGTATGATTTAATTAA+AGG - chr2.2:11317892-11317911 MS.gene059303:CDS 30.0%
GAGATATTATTTCAACTGCA+TGG + chr2.2:11314706-11314725 None:intergenic 30.0%
GAGATTTATTCACAAATACC+AGG + chr2.2:11315521-11315540 None:intergenic 30.0%
GAGTTGACATAAAAACTCTA+GGG - chr2.2:11316441-11316460 MS.gene059303:intron 30.0%
GGAAGTGATAAAAAATGGAA+CGG - chr2.2:11317315-11317334 MS.gene059303:intron 30.0%
GGTAAGGAAGTGATAAAAAA+TGG - chr2.2:11317310-11317329 MS.gene059303:intron 30.0%
GGTGAAATCCAATGATATAA+AGG - chr2.2:11315998-11316017 MS.gene059303:intron 30.0%
GTGAAGTCAATTGACAAAAA+TGG + chr2.2:11315463-11315482 None:intergenic 30.0%
GTTGTTTAATGAAGTTGTAG+AGG + chr2.2:11317090-11317109 None:intergenic 30.0%
TAATCTAACCTGTCTGATAA+GGG + chr2.2:11313589-11313608 None:intergenic 30.0%
TACAATACGGGAAAGAATAA+TGG + chr2.2:11315829-11315848 None:intergenic 30.0%
TATGAGGAAAATTATGTCGA+AGG - chr2.2:11314414-11314433 MS.gene059303:CDS 30.0%
TGAACCAGAACAATTTAAAC+CGG - chr2.2:11317717-11317736 MS.gene059303:CDS 30.0%
TTAGTAAAAGGAAGGAGTAA+AGG - chr2.2:11316382-11316401 MS.gene059303:intron 30.0%
TTTGCAGTTTCATACATTCA+TGG + chr2.2:11314016-11314035 None:intergenic 30.0%
! AACAGCTTTGTAGAATAAAG+AGG - chr2.2:11315761-11315780 MS.gene059303:intron 30.0%
! ATCAAACCTGGACATATTTT+TGG - chr2.2:11316793-11316812 MS.gene059303:intron 30.0%
! CTCGACTTTGGTATATTTTT+GGG - chr2.2:11316192-11316211 MS.gene059303:intron 30.0%
! CTGTATTTCTATTGTGGATT+AGG + chr2.2:11316645-11316664 None:intergenic 30.0%
! CTTCACCATTTCAATTTTTC+TGG + chr2.2:11315945-11315964 None:intergenic 30.0%
! GAGATTTTCTTCTTACTTGT+AGG - chr2.2:11316029-11316048 MS.gene059303:intron 30.0%
! GATTTTCTTCTTACTTGTAG+GGG - chr2.2:11316031-11316050 MS.gene059303:intron 30.0%
! GTTATGCTCTCAATCAATTT+TGG + chr2.2:11317427-11317446 None:intergenic 30.0%
! TATTTGAAATCTCTCGACTT+TGG - chr2.2:11316180-11316199 MS.gene059303:intron 30.0%
! TCTCGACTTTGGTATATTTT+TGG - chr2.2:11316191-11316210 MS.gene059303:intron 30.0%
! TGAGTTGACATAAAAACTCT+AGG - chr2.2:11316440-11316459 MS.gene059303:intron 30.0%
! TGTTCCTAGTGTTGAATTTA+CGG - chr2.2:11313813-11313832 MS.gene059303:CDS 30.0%
! TTTCACATCATTATTTGCTG+GGG + chr2.2:11317238-11317257 None:intergenic 30.0%
!! ACTGAGTTGAAAATCTTTTC+TGG + chr2.2:11317611-11317630 None:intergenic 30.0%
!! TTTTTGTTATCGTATGGACT+AGG - chr2.2:11315049-11315068 MS.gene059303:intron 30.0%
!!! AAACTTTTTCAGAACACGAA+TGG - chr2.2:11313630-11313649 MS.gene059303:CDS 30.0%
AAGAAGGGTGAGTTATTATG+TGG - chr2.2:11317655-11317674 MS.gene059303:CDS 35.0%
AAGGAAGGAGTAAAGGAAAA+TGG - chr2.2:11316389-11316408 MS.gene059303:intron 35.0%
AATTGAAATGGTGAAGGAGA+AGG - chr2.2:11315949-11315968 MS.gene059303:intron 35.0%
AATTTCTTCAAGTGGTTGGA+TGG + chr2.2:11317014-11317033 None:intergenic 35.0%
ACAAAACACCACCATAATCT+AGG + chr2.2:11316153-11316172 None:intergenic 35.0%
ACAGAAAATGTATTCTGTGG+GGG + chr2.2:11315487-11315506 None:intergenic 35.0%
AGAAGGGTGAGTTATTATGT+GGG - chr2.2:11317656-11317675 MS.gene059303:CDS 35.0%
ATCCATTAATTACAACGCCT+TGG - chr2.2:11315644-11315663 MS.gene059303:intron 35.0%
CACAGAAAATGTATTCTGTG+GGG + chr2.2:11315488-11315507 None:intergenic 35.0%
CAGAACAATTTAAACCGGAA+CGG - chr2.2:11317722-11317741 MS.gene059303:CDS 35.0%
CAGACAGGTTAGATTATTTC+TGG - chr2.2:11313593-11313612 MS.gene059303:CDS 35.0%
CTTTATCTGCGAGTTTAAAG+GGG - chr2.2:11316347-11316366 MS.gene059303:intron 35.0%
GAAAATATCGATAACGTGCT+TGG - chr2.2:11316568-11316587 MS.gene059303:intron 35.0%
GAAGCAAAGTTCAAGCATAT+GGG - chr2.2:11316757-11316776 MS.gene059303:intron 35.0%
GACAAAAGAGATGTTCTAGT+TGG - chr2.2:11313784-11313803 MS.gene059303:CDS 35.0%
GCACAGAAAATGTATTCTGT+GGG + chr2.2:11315489-11315508 None:intergenic 35.0%
GGAAAATTTCTTCAAGTGGT+TGG + chr2.2:11317018-11317037 None:intergenic 35.0%
GTCAACTCATACTCAAGTTA+GGG + chr2.2:11316429-11316448 None:intergenic 35.0%
GTGTAAGTTGTCACTATATC+TGG + chr2.2:11315189-11315208 None:intergenic 35.0%
GTTGGAACTAATAAATTCGG+TGG - chr2.2:11317534-11317553 MS.gene059303:intron 35.0%
GTTTCAGAAGCTTGTAATGA+GGG - chr2.2:11317678-11317697 MS.gene059303:CDS 35.0%
TAAAAAATGGAACGGAGTTC+GGG - chr2.2:11317323-11317342 MS.gene059303:intron 35.0%
TCAACTCATACTCAAGTTAG+GGG + chr2.2:11316428-11316447 None:intergenic 35.0%
TGAACAGAAATTTCTGCAGT+GGG + chr2.2:11316868-11316887 None:intergenic 35.0%
TGAAGCAAAGTTCAAGCATA+TGG - chr2.2:11316756-11316775 MS.gene059303:intron 35.0%
TGGAGGAAAATTTCTTCAAG+TGG + chr2.2:11317022-11317041 None:intergenic 35.0%
TGTCAACTCATACTCAAGTT+AGG + chr2.2:11316430-11316449 None:intergenic 35.0%
TTATGAACTTTCTGACTCAG+TGG - chr2.2:11313962-11313981 MS.gene059303:CDS 35.0%
TTTACGGGAAATATTAGGGT+TGG - chr2.2:11313829-11313848 MS.gene059303:CDS 35.0%
TTTCCCGTAAATTCAACACT+AGG + chr2.2:11313820-11313839 None:intergenic 35.0%
TTTCTCTCACCTCTTTGATA+TGG - chr2.2:11313753-11313772 MS.gene059303:CDS 35.0%
TTTGGTCCAAAAATATGTCC+AGG + chr2.2:11316802-11316821 None:intergenic 35.0%
! AGGAGAGGACTTTTAGTAAA+AGG - chr2.2:11316370-11316389 MS.gene059303:intron 35.0%
! AGTATAAGTGTAGGGGTATA+TGG + chr2.2:11315405-11315424 None:intergenic 35.0%
! CACAAATACCAGGAAACTTT+TGG + chr2.2:11315511-11315530 None:intergenic 35.0%
! GAACATCTCTTTTGTCAACA+AGG + chr2.2:11313780-11313799 None:intergenic 35.0%
! GAGGACTTTTAGTAAAAGGA+AGG - chr2.2:11316374-11316393 MS.gene059303:intron 35.0%
! GGGCAAATGTTTTCAATGAT+AGG - chr2.2:11314309-11314328 MS.gene059303:intron 35.0%
! GGGTGAAAGTATAAGTGTAT+GGG - chr2.2:11316051-11316070 MS.gene059303:intron 35.0%
! GTTCCTAGTGTTGAATTTAC+GGG - chr2.2:11313814-11313833 MS.gene059303:CDS 35.0%
! GTTTGACTCGTTAAAAGAGT+TGG - chr2.2:11317516-11317535 MS.gene059303:intron 35.0%
! TGCTCTCAATCAATTTTGGA+AGG + chr2.2:11317423-11317442 None:intergenic 35.0%
! TGGGATATTTTGCTTGTTTG+TGG + chr2.2:11316103-11316122 None:intergenic 35.0%
! TTGATTGAGAGCATAACGAA+CGG - chr2.2:11317430-11317449 MS.gene059303:intron 35.0%
!! AACCAAGGCGTTGTAATTAA+TGG + chr2.2:11315649-11315668 None:intergenic 35.0%
!! AGAGATGGAATCAGTTTTGT+GGG - chr2.2:11315975-11315994 MS.gene059303:intron 35.0%
!! TAGACAGTGTTGCTTCAATT+TGG + chr2.2:11316820-11316839 None:intergenic 35.0%
!!! CACAACTTGCTTTTTGTGTT+GGG - chr2.2:11317367-11317386 MS.gene059303:intron 35.0%
!!! CGTGTTCTGAAAAAGTTTTC+TGG + chr2.2:11313628-11313647 None:intergenic 35.0%
!!! TGAAAAAGTTTTCTGGCTTC+TGG + chr2.2:11313621-11313640 None:intergenic 35.0%
ACCAACATAGTTACAGGCAT+GGG + chr2.2:11315604-11315623 None:intergenic 40.0%
ACCAGAACTGATATCAAACC+TGG - chr2.2:11316781-11316800 MS.gene059303:intron 40.0%
AGAAAGGAAGCAAGAGAGAA+AGG - chr2.2:11317478-11317497 MS.gene059303:intron 40.0%
AGGATGGAAAGACAAATGTG+TGG + chr2.2:11316252-11316271 None:intergenic 40.0%
ATAATTGGGGAGTTGAACAG+AGG + chr2.2:11315579-11315598 None:intergenic 40.0%
ATTTAGCCCAGCCTAGATTA+TGG - chr2.2:11316139-11316158 MS.gene059303:intron 40.0%
CAACAAGGTCCATATCAAAG+AGG + chr2.2:11313765-11313784 None:intergenic 40.0%
CAATAAACAGTGTGCAGGTA+AGG - chr2.2:11317825-11317844 MS.gene059303:CDS 40.0%
CACTGTTTATTGGACACAGT+TGG + chr2.2:11317817-11317836 None:intergenic 40.0%
CATAAGGGTAAGAGAAGGAA+TGG + chr2.2:11317042-11317061 None:intergenic 40.0%
CCAACACAAAAAGCAAGTTG+TGG + chr2.2:11317369-11317388 None:intergenic 40.0%
CGTTCCGGTTTAAATTGTTC+TGG + chr2.2:11317724-11317743 None:intergenic 40.0%
CTTACCTGCACACTGTTTAT+TGG + chr2.2:11317827-11317846 None:intergenic 40.0%
GAACAGAAATTTCTGCAGTG+GGG + chr2.2:11316867-11316886 None:intergenic 40.0%
GAACGGTTCACTAAAGAGAA+AGG - chr2.2:11317739-11317758 MS.gene059303:CDS 40.0%
GGCACAGAAAATGTATTCTG+TGG + chr2.2:11315490-11315509 None:intergenic 40.0%
GGTTTCAGAAGCTTGTAATG+AGG - chr2.2:11317677-11317696 MS.gene059303:CDS 40.0%
GTGAACAGAAATTTCTGCAG+TGG + chr2.2:11316869-11316888 None:intergenic 40.0%
GTGTTGGGTTTCAACTCATA+TGG - chr2.2:11317382-11317401 MS.gene059303:intron 40.0%
TACAGGCATGGGAGATAATT+GGG + chr2.2:11315593-11315612 None:intergenic 40.0%
TACCAACATAGTTACAGGCA+TGG + chr2.2:11315605-11315624 None:intergenic 40.0%
TCACGTAGTATACTTCATGC+AGG - chr2.2:11316709-11316728 MS.gene059303:intron 40.0%
TCCAGGTTTGATATCAGTTC+TGG + chr2.2:11316785-11316804 None:intergenic 40.0%
TGGGTTTCAACTCATATGGT+GGG - chr2.2:11317386-11317405 MS.gene059303:intron 40.0%
TTACAGGCATGGGAGATAAT+TGG + chr2.2:11315594-11315613 None:intergenic 40.0%
TTCCATTACTGCCTTACAGA+AGG - chr2.2:11317924-11317943 MS.gene059303:CDS 40.0%
TTCTCTTTAGTGAACCGTTC+CGG + chr2.2:11317739-11317758 None:intergenic 40.0%
TTCTGAACCTCAACATGCTA+AGG - chr2.2:11313867-11313886 MS.gene059303:CDS 40.0%
TTGGGTTTCAACTCATATGG+TGG - chr2.2:11317385-11317404 MS.gene059303:intron 40.0%
TTTCTGTGCCAAAAGTTTCC+TGG - chr2.2:11315500-11315519 MS.gene059303:intron 40.0%
! AAGAGCATAAGGGTAAGAGA+AGG + chr2.2:11317047-11317066 None:intergenic 40.0%
! AGGGGTGAAAGTATAAGTGT+AGG + chr2.2:11316068-11316049 None:intergenic 40.0%
! GAGAGATGGAATCAGTTTTG+TGG - chr2.2:11315974-11315993 MS.gene059303:intron 40.0%
! GATTCACGTTGGTGAAGAAA+GGG + chr2.2:11313702-11313721 None:intergenic 40.0%
! GGGGTGAAAGTATAAGTGTA+GGG + chr2.2:11316069-11316050 None:intergenic 40.0%
! GGGGTGAAAGTATAAGTGTA+TGG - chr2.2:11316050-11316069 MS.gene059303:intron 40.0%
! GGGTGAAAGTATAAGTGTAG+GGG + chr2.2:11315412-11315431 None:intergenic 40.0%
!! AGATGGAATCAGTTTTGTGG+GGG - chr2.2:11315977-11315996 MS.gene059303:intron 40.0%
!! GAGATGGAATCAGTTTTGTG+GGG - chr2.2:11315976-11315995 MS.gene059303:intron 40.0%
!! TAAAAACTCTAGGGTCCGTT+TGG - chr2.2:11316450-11316469 MS.gene059303:intron 40.0%
!! TGTTATCGTATGGACTAGGA+TGG - chr2.2:11315053-11315072 MS.gene059303:intron 40.0%
!!! CCACAACTTGCTTTTTGTGT+TGG - chr2.2:11317366-11317385 MS.gene059303:intron 40.0%
AACACCACCATAATCTAGGC+TGG + chr2.2:11316149-11316168 None:intergenic 45.0%
AAGGAAGCAAGAGAGAAAGG+CGG - chr2.2:11317481-11317500 MS.gene059303:intron 45.0%
AAGGGTAAGAGAAGGAATGG+AGG + chr2.2:11317039-11317058 None:intergenic 45.0%
ACACCACCATAATCTAGGCT+GGG + chr2.2:11316148-11316167 None:intergenic 45.0%
ACAGGCATGGGAGATAATTG+GGG + chr2.2:11315592-11315611 None:intergenic 45.0%
ACCCTTCTTCACATTGAACG+CGG + chr2.2:11317644-11317663 None:intergenic 45.0%
AGAAAGGCGGTTCAACTCTT+GGG - chr2.2:11317494-11317513 MS.gene059303:intron 45.0%
AGTGGTACCTTAGCATGTTG+AGG + chr2.2:11313877-11313896 None:intergenic 45.0%
CAAATTGAAGTGGAACCGGT+GGG + chr2.2:11317582-11317601 None:intergenic 45.0%
CAACTTACACTAGACGCTCA+AGG - chr2.2:11315199-11315218 MS.gene059303:intron 45.0%
CGACCAAATTGAAGTGGAAC+CGG + chr2.2:11317586-11317605 None:intergenic 45.0%
CTCTGGCAAGTACTTTGCTT+AGG + chr2.2:11316895-11316914 None:intergenic 45.0%
GTGTCCAATAAACAGTGTGC+AGG - chr2.2:11317820-11317839 MS.gene059303:CDS 45.0%
TACCCTTATGCTCTTGTCAG+TGG - chr2.2:11317052-11317071 MS.gene059303:intron 45.0%
TATCTGCGAGTTTAAAGGGG+AGG - chr2.2:11316350-11316369 MS.gene059303:intron 45.0%
TCCCATGCCTGTAACTATGT+TGG - chr2.2:11315600-11315619 MS.gene059303:intron 45.0%
TCCGCGTTCAATGTGAAGAA+GGG - chr2.2:11317640-11317659 MS.gene059303:CDS 45.0%
TCTGATAAGGGACCTAGCAA+TGG + chr2.2:11313577-11313596 None:intergenic 45.0%
TGAAGGAGAAGGAAGAGAGA+TGG - chr2.2:11315960-11315979 MS.gene059303:intron 45.0%
TTGGTGAAGAAAGGGAACGT+GGG + chr2.2:11313694-11313713 None:intergenic 45.0%
! CTCCACTGACAAGAGCATAA+GGG + chr2.2:11317057-11317076 None:intergenic 45.0%
! GGATTCACGTTGGTGAAGAA+AGG + chr2.2:11313703-11313722 None:intergenic 45.0%
! TCTCCACTGACAAGAGCATA+AGG + chr2.2:11317058-11317077 None:intergenic 45.0%
! TCTGGTTCATCAAACACGAC+CGG + chr2.2:11317706-11317725 None:intergenic 45.0%
! TTGTGGCACACTTGTTACGT+CGG - chr2.2:11317875-11317894 MS.gene059303:CDS 45.0%
! TTTGGGATCAAGGGAAGGAT+CGG + chr2.2:11316918-11316937 None:intergenic 45.0%
!! ATCGTATGGACTAGGATGGT+GGG - chr2.2:11315057-11315076 MS.gene059303:intron 45.0%
!! GAAAGTAGGTGGTGTCATAG+TGG + chr2.2:11313895-11313914 None:intergenic 45.0%
!! TATCGTATGGACTAGGATGG+TGG - chr2.2:11315056-11315075 MS.gene059303:intron 45.0%
!!! ATTCGGCGATTTTGGGATCA+AGG + chr2.2:11316928-11316947 None:intergenic 45.0%
!!! TCTAGGGTCCGTTTGGTTTT+CGG - chr2.2:11316457-11316476 MS.gene059303:intron 45.0%
!!! TTCGGCGATTTTGGGATCAA+GGG + chr2.2:11316927-11316946 None:intergenic 45.0%
!! TTAAAAATAATTGTAAATAA+GGG - chr2.2:11314289-11314308 MS.gene059303:intron 5.0%
!! TTTAAAAATAATTGTAAATA+AGG - chr2.2:11314288-11314307 MS.gene059303:intron 5.0%
!!! TTCTTTAAAAATATTATTTT+TGG - chr2.2:11316293-11316312 MS.gene059303:intron 5.0%
!!! TTTTACAATTATTATTTTTT+TGG + chr2.2:11315005-11315024 None:intergenic 5.0%
ACAGTTGGCGAACCAGTTTG+TGG + chr2.2:11317802-11317821 None:intergenic 50.0%
ACGTGGGTGGAACATTGGTA+CGG + chr2.2:11313678-11313697 None:intergenic 50.0%
AGCATAACGAACGGTCCAAC+CGG - chr2.2:11317439-11317458 MS.gene059303:intron 50.0%
CCAAATTGAAGTGGAACCGG+TGG + chr2.2:11317583-11317602 None:intergenic 50.0%
CTCCGCGTTCAATGTGAAGA+AGG - chr2.2:11317639-11317658 MS.gene059303:CDS 50.0%
CTGGTTCATCAAACACGACC+GGG + chr2.2:11317705-11317724 None:intergenic 50.0%
GAAGCTTGTAATGAGGGACC+CGG - chr2.2:11317684-11317703 MS.gene059303:CDS 50.0%
GAGAAAGGCGGTTCAACTCT+TGG - chr2.2:11317493-11317512 MS.gene059303:intron 50.0%
GATCCCAAAATCGCCGAATC+AGG - chr2.2:11316929-11316948 MS.gene059303:intron 50.0%
GCTCCTCCATGCTCAACAAA+TGG - chr2.2:11316951-11316970 MS.gene059303:intron 50.0%
GCTTGTTTGTGGCCATCACT+AGG + chr2.2:11316092-11316111 None:intergenic 50.0%
GGCCTTCTGTAAGGCAGTAA+TGG + chr2.2:11317929-11317948 None:intergenic 50.0%
TAGCAACTCCACCGAAAGCA+AGG - chr2.2:11313506-11313525 MS.gene059303:CDS 50.0%
TAGCCCAGCCTAGATTATGG+TGG - chr2.2:11316142-11316161 MS.gene059303:intron 50.0%
TGCTAGGTCCCTTATCAGAC+AGG - chr2.2:11313578-11313597 MS.gene059303:CDS 50.0%
TGCTTTCGGTGGAGTTGCTA+GGG + chr2.2:11313506-11313525 None:intergenic 50.0%
TTGCTTTCGGTGGAGTTGCT+AGG + chr2.2:11313507-11313526 None:intergenic 50.0%
! CTGGCTCGACCAAATTGAAG+TGG + chr2.2:11317592-11317611 None:intergenic 50.0%
! CTTCTACCGACTGTGAGTGT+CGG - chr2.2:11316986-11317005 MS.gene059303:intron 50.0%
! GAGCCATTTGTTGAGCATGG+AGG + chr2.2:11316957-11316976 None:intergenic 50.0%
! GTTGGTGAAGAAAGGGAACG+TGG + chr2.2:11313695-11313714 None:intergenic 50.0%
! TGCGAGCCATTTGTTGAGCA+TGG + chr2.2:11316960-11316979 None:intergenic 50.0%
! TGGTCTAATGGGCCACAAAC+TGG - chr2.2:11317787-11317806 MS.gene059303:CDS 50.0%
!! CCACCGGTTCCACTTCAATT+TGG - chr2.2:11317580-11317599 MS.gene059303:CDS 50.0%
!!! GAGCCTGATTCGGCGATTTT+GGG + chr2.2:11316935-11316954 None:intergenic 50.0%
!!! GCGATTTTGGGATCAAGGGA+AGG + chr2.2:11316923-11316942 None:intergenic 50.0%
AACCCTGCGAATGAACCCAC+CGG - chr2.2:11317564-11317583 MS.gene059303:CDS 55.0%
AGGGAACGTGGGTGGAACAT+TGG + chr2.2:11313683-11313702 None:intergenic 55.0%
CACAATCAACGCAGCGGTGA+AGG + chr2.2:11317860-11317879 None:intergenic 55.0%
GAGCATGGAGGAGCCTGATT+CGG + chr2.2:11316945-11316964 None:intergenic 55.0%
GCGAGTTTAAAGGGGAGGAG+AGG - chr2.2:11316355-11316374 MS.gene059303:intron 55.0%
GTGAAGAAAGGGAACGTGGG+TGG + chr2.2:11313691-11313710 None:intergenic 55.0%
GTGTGCCACAATCAACGCAG+CGG + chr2.2:11317866-11317885 None:intergenic 55.0%
TCCACCGAAAGCAAGGCCAA+CGG - chr2.2:11313513-11313532 MS.gene059303:CDS 55.0%
TTCGGTGGAGTTGCTAGGGA+CGG + chr2.2:11313502-11313521 None:intergenic 55.0%
! AACCGGTGGGTTCATTCGCA+GGG + chr2.2:11317569-11317588 None:intergenic 55.0%
! ATCAAGGGAAGGATCGGCTC+TGG + chr2.2:11316912-11316931 None:intergenic 55.0%
!! AGCTCCGTTGGCCTTGCTTT+CGG + chr2.2:11313520-11313539 None:intergenic 55.0%
!! ATGGTGCCGACACTCACAGT+CGG + chr2.2:11316995-11317014 None:intergenic 55.0%
!! CTTCACCGCTGCGTTGATTG+TGG - chr2.2:11317858-11317877 MS.gene059303:CDS 55.0%
!!! GGAGCCTGATTCGGCGATTT+TGG + chr2.2:11316936-11316955 None:intergenic 55.0%
AATGGCCATCCGTGGCTTCC+CGG + chr2.2:11313559-11313578 None:intergenic 60.0%
AGATTCCGGGAAGCCACGGA+TGG - chr2.2:11313551-11313570 MS.gene059303:CDS 60.0%
AGCCACGGATGGCCATTGCT+AGG - chr2.2:11313562-11313581 MS.gene059303:CDS 60.0%
CTACCGATCCGGCAGATTCC+GGG - chr2.2:11313538-11313557 MS.gene059303:CDS 60.0%
CTTCCCGGAATCTGCCGGAT+CGG + chr2.2:11313544-11313563 None:intergenic 60.0%
GACCTAGCAATGGCCATCCG+TGG + chr2.2:11313567-11313586 None:intergenic 60.0%
GCTACCGATCCGGCAGATTC+CGG - chr2.2:11313537-11313556 MS.gene059303:CDS 60.0%
! GAACCGGTGGGTTCATTCGC+AGG + chr2.2:11317570-11317589 None:intergenic 60.0%
! GCTAGGGACGGTGGTGGTAT+CGG + chr2.2:11313490-11313509 None:intergenic 60.0%
!! ACGGTGGTGGTATCGGTGGT+GGG + chr2.2:11313483-11313502 None:intergenic 60.0%
!! TCCGTTGGCCTTGCTTTCGG+TGG + chr2.2:11313517-11313536 None:intergenic 60.0%
CGGCAGATTCCGGGAAGCCA+CGG - chr2.2:11313547-11313566 MS.gene059303:CDS 65.0%
CGTGGCTTCCCGGAATCTGC+CGG + chr2.2:11313549-11313568 None:intergenic 65.0%
GGAGTTGCTAGGGACGGTGG+TGG + chr2.2:11313496-11313515 None:intergenic 65.0%
GGCCAACGGAGCTACCGATC+CGG - chr2.2:11313527-11313546 MS.gene059303:CDS 65.0%
GGTGGAGTTGCTAGGGACGG+TGG + chr2.2:11313499-11313518 None:intergenic 65.0%
TGCCGGATCGGTAGCTCCGT+TGG + chr2.2:11313532-11313551 None:intergenic 65.0%
! AGGGACGGTGGTGGTATCGG+TGG + chr2.2:11313487-11313506 None:intergenic 65.0%
!! GACGGTGGTGGTATCGGTGG+TGG + chr2.2:11313484-11313503 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 11313472 11317954 11313472 ID=MS.gene059303
chr2.2 mRNA 11313472 11317954 11313472 ID=MS.gene059303.t1;Parent=MS.gene059303
chr2.2 exon 11317538 11317954 11317538 ID=MS.gene059303.t1.exon1;Parent=MS.gene059303.t1
chr2.2 CDS 11317538 11317954 11317538 ID=cds.MS.gene059303.t1;Parent=MS.gene059303.t1
chr2.2 exon 11314314 11314695 11314314 ID=MS.gene059303.t1.exon2;Parent=MS.gene059303.t1
chr2.2 CDS 11314314 11314695 11314314 ID=cds.MS.gene059303.t1;Parent=MS.gene059303.t1
chr2.2 exon 11313472 11314115 11313472 ID=MS.gene059303.t1.exon3;Parent=MS.gene059303.t1
chr2.2 CDS 11313472 11314115 11313472 ID=cds.MS.gene059303.t1;Parent=MS.gene059303.t1
Gene Sequence

>MS.gene059303

ATGTCACTCCCACCACCGATACCACCACCGTCCCTAGCAACTCCACCGAAAGCAAGGCCAACGGAGCTACCGATCCGGCAGATTCCGGGAAGCCACGGATGGCCATTGCTAGGTCCCTTATCAGACAGGTTAGATTATTTCTGGTTCCAGAAGCCAGAAAACTTTTTCAGAACACGAATGGAAAAGTACAAGAGTACTGTATTCCGTACCAATGTTCCACCCACGTTCCCTTTCTTCACCAACGTGAATCCTAATATTATTGCAGTTCTTGATTGTAAGTCTTTCTCTCACCTCTTTGATATGGACCTTGTTGACAAAAGAGATGTTCTAGTTGGAGATTTTGTTCCTAGTGTTGAATTTACGGGAAATATTAGGGTTGGTGTTTATCAAGATGTTTCTGAACCTCAACATGCTAAGGTACCACTATGACACCACCTACTTTCTTATTTCTTTTGATCATGAAATTCATTTTGTCAATTTTGTTTCTTAGTTATGAACTTTCTGACTCAGTGGTGTGATAATTTGATAACAATAAACAAATCCATGAATGTATGAAACTGCAAAAATTTCCATAAATTTTCCTTGTCATTTTGTTGTTCAAATGTATCTTTAGTTTGTCGGTTTAATCATTAAATGTGTTTTTTGTTTGTCAATTTAGACCATACAATTACTAACAAAAGAAATATTGTTCATGTGTTTGCAATTTTGATAAATTTTAAAGATTATAATGACATCTTACATATTTAAGGATCAAAATTGTTGTTTGCTCTGTTTTAATGTTACATTTTCAAATTCACAACTAATCATATGAATGATTTTAAAAATAATTGTAAATAAGGGCAAATGTTTTCAATGATAGGATAGTTATGATTAATTGGAAGTGTAAAATATCTTTACTATACAAATTAAATTAATAAAATTAATTAATAAGTCTATGATTTTTATGAGGAAAATTATGTCGAAGGATTATGAAATATTAATCTGCATGGGTATCAAAAAAACATTATGTACGGGACTGAGACAAATTGTAAAAATTTTTATGAGGAAAATTATGTCGAAGGATTATGAAATATTAATCTGCATGGGTATCAAAAAAACATTATGTACGGGACTGAGACAAATTGTAAAAAAAGGTAAATAATCATTTTTGTCTTCGAATGTGAAACTAATCACAATAATTCTGTAATGTATCGAAATTTCAAAATAGTATTTGATTACGCGTTTTTTTAGTCCATGCAGTTGAAATAATATCTCAGTGCTAACAATAACTATTTTTTTTATAAGGATTGATATGACAATATATAAGTATTTATATGAACAGATATGACAATATATAAATACTTATATGAACAGATATGACACTGAGTAAATATAATGAGAGACTGATATGCCACCATTAACATATCATTTTAATGTTAGAATTATTTTAACTATCTTAGTGCATAATCAATGATTATTGTAAAATTTCGATATATTAAAGAACTATTGTGACTATTTATTATAAATTCAAGGACGAAAAATGATTATTTACCAAAAAAATAATAATTGTAAAAGAAGACAAAATATACGTAAAGATATTTTTGTTATCGTATGGACTAGGATGGTGGGAAGTCGTTTTCAACTTTTTACTTTACTTGATTTATTATTTAAGGTTTTCAACTTTTTTTTTCCGACAAAATTTAAGGTTTTCTAGTTAAAAAATTTAACGGTAGGACCAGATATAGTGACAACTTACACTAGACGCTCAAGGACATATCATTATTTATTGTACTTTTTTCGGTTTAGCATTATCTATATATTTTTATCATGTTGAGTTTTATTTTGTGTTACGTTAATAATTATTGAGTTTAATATTATATTTTGACAAAAATTGGTTTTAATGTTTAATTTGCGTTGTTTATTTTCAAATTTTAGTGATGGGGAAGTTTTACCATATACCCCTACACTTATACTTTCACCCCTACAAATTATTTTAAAATCCAATTTTACCATTTTTGTCAATTGACTTCACACCCCCACAGAATACATTTTCTGTGCCAAAAGTTTCCTGGTATTTGTGAATAAATCTCTTGATAACTTGCAGATTGTATTGTGCAACACACATCCTCTGTTCAACTCCCCAATTATCTCCCATGCCTGTAACTATGTTGGTACAAATTCACAGCTTTGATAATCCATTAATTACAACGCCTTGGTTCTTTCATAAATTAAATTAAATGGTATTGCTTGCACATGATAATAGTAATTTGATGAAACCAAACAAAATTTTTATTGAAATAAAAAATTGAAAACAGCTTTGTAGAATAAAGAGGAATCATAGATCAATTTCATTTTGGGGATATTTATTTTGTAAACCATTATTCTTTCCCGTATTGTAATGTAAAAACATTCGTAGATGCAAAATTGAAGGAATGATTAATAAGTAAACTAAAGGTTATGTGTTGAAATCATAGAAGAAAAACAAGAAGAACCAGAAAAATTGAAATGGTGAAGGAGAAGGAAGAGAGATGGAATCAGTTTTGTGGGGGTGAAATCCAATGATATAAAGGGTAAAATTGAGATTTTCTTCTTACTTGTAGGGGTGAAAGTATAAGTGTATGGGTATATGGTATAATTTCCTAGTGATGGCCACAAACAAGCAAAATATCCCATTGTTTCAAGGCTTGTATTTAGCCCAGCCTAGATTATGGTGGTGTTTTGTCCCGTATTATTTGAAATCTCTCGACTTTGGTATATTTTTGGGACCATGACAATTGATAGAAAGATATTTTTGGCTACCACACATTTGTCTTTCCATCCTCACAACTTTTCAATTTTTTTTTTCTTTAAAAATATTATTTTTGGTCTTTTTACACAACAATTTTCTTTTCAAAAACTTTATCTGCGAGTTTAAAGGGGAGGAGAGGACTTTTAGTAAAAGGAAGGAGTAAAGGAAAATGGAAGAAACGATAGTCCCCTAACTTGAGTATGAGTTGACATAAAAACTCTAGGGTCCGTTTGGTTTTCGGAAACATTTTTTTTGTTTTCATTTCATATTCTCTTTTCAAATTTCAAGAGTTAGAAAACGTTTGTTTTAATTTCTCATTTTCAAGAAATGAAAATATCGATAACGTGCTTGGTTTGACCAATTTTAATTACCAGTTCATAAAATATTGCATAATATTCAGAGGCCTAATCCACAATAGAAATACAGTCATATAAATAGATTCATCAAACAACAATTAGCATTCATTTTGATCACGTAGTATACTTCATGCAGGCAAAGAATTTCTCCATGAACATTTTGAAGCAAAGTTCAAGCATATGGGTACCAGAACTGATATCAAACCTGGACATATTTTTGGACCAAATTGAAGCAACACTGTCTAATTCTTCATCAGCAAGTTACTTCTCCCCACTGCAGAAATTTCTGTTCACGTTCCTAAGCAAAGTACTTGCCAGAGCCGATCCTTCCCTTGATCCCAAAATCGCCGAATCAGGCTCCTCCATGCTCAACAAATGGCTCGCAGTTCAGCTTCTACCGACTGTGAGTGTCGGCACCATCCAACCACTTGAAGAAATTTTCCTCCATTCCTTCTCTTACCCTTATGCTCTTGTCAGTGGAGACTACAAAAACCTCTACAACTTCATTAAACAACATGGTAACACTCTGTTTATTTAAAGTATAGTTTTTGTTAAAATTCTTAGAACATCATACTTAGTATATAAATTCTCTCTTTTTCATAAAAAAATACTCAAGATTATATAATTTCAATGCATCATGCCCCAGCAAATAATGATGTGAAAAAGAAAACATTTGCTTAATTTATTTGATGTGTAATAAACAATATTGATAACAGGTAAGGAAGTGATAAAAAATGGAACGGAGTTCGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTTGTGTTGGGTTTCAACTCATATGGTGGGTTTTCAATTTTCCTTCCAAAATTGATTGAGAGCATAACGAACGGTCCAACCGGTTTGCAAGAGAAGTTGAGAAAGGAAGCAAGAGAGAAAGGCGGTTCAACTCTTGGGTTTGACTCGTTAAAAGAGTTGGAACTAATAAATTCGGTGGTTTATGAAACCCTGCGAATGAACCCACCGGTTCCACTTCAATTTGGTCGAGCCAGAAAAGATTTTCAACTCAGTTCATATGACTCCGCGTTCAATGTGAAGAAGGGTGAGTTATTATGTGGGTTTCAGAAGCTTGTAATGAGGGACCCGGTCGTGTTTGATGAACCAGAACAATTTAAACCGGAACGGTTCACTAAAGAGAAAGGAGCCGAGTTATTGAACTATTTGTATTGGTCTAATGGGCCACAAACTGGTTCGCCAACTGTGTCCAATAAACAGTGTGCAGGTAAGGACATCGTGACCTTCACCGCTGCGTTGATTGTGGCACACTTGTTACGTCGGTATGATTTAATTAAAGGGGATGGTAGTTCCATTACTGCCTTACAGAAGGCCAAATGA

Protein sequence

>MS.gene059303.t1

MSLPPPIPPPSLATPPKARPTELPIRQIPGSHGWPLLGPLSDRLDYFWFQKPENFFRTRMEKYKSTVFRTNVPPTFPFFTNVNPNIIAVLDCKSFSHLFDMDLVDKRDVLVGDFVPSVEFTGNIRVGVYQDVSEPQHAKAKNFSMNILKQSSSIWVPELISNLDIFLDQIEATLSNSSSASYFSPLQKFLFTFLSKVLARADPSLDPKIAESGSSMLNKWLAVQLLPTVSVGTIQPLEEIFLHSFSYPYALVSGDYKNLYNFIKQHGKEVIKNGTEFGLSEDEAIHNLLFVLGFNSYGGFSIFLPKLIESITNGPTGLQEKLRKEAREKGGSTLGFDSLKELELINSVVYETLRMNPPVPLQFGRARKDFQLSSYDSAFNVKKGELLCGFQKLVMRDPVVFDEPEQFKPERFTKEKGAELLNYLYWSNGPQTGSPTVSNKQCAGKDIVTFTAALIVAHLLRRYDLIKGDGSSITALQKAK