AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37141

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37141.t1 MTR_6g016470 95.294 1020 46 2 1 1018 1 1020 0.0 1953
MS.gene37141.t1 MTR_7g095710 64.678 1039 322 13 11 1012 17 1047 0.0 1256
MS.gene37141.t1 MTR_8g013780 91.944 571 45 1 448 1017 1 571 0.0 1081
MS.gene37141.t1 MTR_2g038310 56.477 965 399 9 66 1017 126 1082 0.0 1033
MS.gene37141.t1 MTR_4g008170 53.455 1042 420 15 20 1013 66 1090 0.0 1014
MS.gene37141.t1 MTR_4g008170 55.352 981 398 14 54 1013 136 1097 0.0 996
MS.gene37141.t1 MTR_2g038310 57.029 875 355 9 66 927 126 992 0.0 929
MS.gene37141.t1 MTR_4g008650 45.805 1013 497 16 6 1004 37 1011 0.0 852
MS.gene37141.t1 MTR_8g090125 47.639 953 455 17 70 1007 49 972 0.0 840
MS.gene37141.t1 MTR_8g013810 89.738 458 40 2 1 458 1 451 0.0 816
MS.gene37141.t1 MTR_4g096990 48.129 962 465 13 51 1004 77 1012 0.0 813
MS.gene37141.t1 MTR_4g043690 46.025 956 474 14 70 1010 96 1024 0.0 803
MS.gene37141.t1 MTR_0005s0140 46.025 956 474 14 70 1010 11 939 0.0 803
MS.gene37141.t1 MTR_5g015590 48.466 945 452 14 70 1004 95 1014 0.0 801
MS.gene37141.t1 MTR_3g103070 48.026 937 449 12 80 1004 106 1016 0.0 801
MS.gene37141.t1 MTR_3g103070 49.247 863 403 11 154 1004 1 840 0.0 756
MS.gene37141.t1 MTR_5g015590 48.963 868 408 14 70 927 95 937 0.0 733
MS.gene37141.t1 MTR_2g105830 52.639 758 341 10 41 791 106 852 0.0 732
MS.gene37141.t1 MTR_8g446010 40.862 974 527 17 45 1004 29 967 0.0 686
MS.gene37141.t1 MTR_8g045070 40.288 973 511 16 45 1004 29 944 0.0 672
MS.gene37141.t1 MTR_4g008650 44.192 835 418 15 6 830 37 833 0.0 658
MS.gene37141.t1 MTR_5g015590 47.849 767 369 13 70 830 95 836 0.0 615
MS.gene37141.t1 MTR_5g015590 46.273 711 351 13 70 774 95 780 7.91e-176 533
MS.gene37141.t1 MTR_5g097270 34.094 877 515 17 152 1002 165 1004 3.61e-143 455
MS.gene37141.t1 MTR_4g014480 30.794 945 573 18 80 1004 66 949 1.00e-123 402
MS.gene37141.t1 MTR_7g100110 32.192 876 473 24 102 885 38 884 1.19e-105 355
MS.gene37141.t1 MTR_8g027160 31.078 872 478 24 106 886 30 869 1.53e-94 320
MS.gene37141.t1 MTR_8g027160 30.999 871 478 24 106 885 30 868 2.28e-93 320
MS.gene37141.t1 MTR_2g105690 61.607 224 81 1 790 1008 19 242 2.94e-92 294
MS.gene37141.t1 MTR_3g103270 30.205 831 485 21 120 885 60 860 7.98e-86 299
MS.gene37141.t1 MTR_8g027160 29.947 758 409 23 106 773 30 755 3.65e-68 243
MS.gene37141.t1 MTR_8g027160 29.815 758 410 23 106 773 30 755 8.07e-68 243
MS.gene37141.t1 MTR_8g089870 24.672 762 463 21 154 881 69 753 2.61e-45 177
MS.gene37141.t1 MTR_4g116950 23.259 761 464 26 72 816 1 657 4.43e-45 177
MS.gene37141.t1 MTR_4g127710 23.416 726 462 20 95 816 24 659 8.46e-45 176
MS.gene37141.t1 MTR_4g127710 23.416 726 462 20 95 816 24 659 9.15e-45 176
MS.gene37141.t1 MTR_2g036650 23.286 700 446 16 123 816 48 662 5.51e-44 173
MS.gene37141.t1 MTR_7g117500 22.758 747 474 21 109 847 41 692 6.35e-44 173
MS.gene37141.t1 MTR_6g011310 24.149 617 368 19 219 824 138 665 2.14e-42 168
MS.gene37141.t1 MTR_2g104860 22.925 711 449 18 123 824 41 661 2.49e-42 168
MS.gene37141.t1 MTR_3g108800 23.514 740 470 21 81 816 9 656 2.64e-42 168
MS.gene37141.t1 MTR_3g108800 23.554 726 461 20 95 816 20 655 4.86e-42 167
MS.gene37141.t1 MTR_2g449840 23.298 764 457 28 81 824 10 664 1.16e-41 166
MS.gene37141.t1 MTR_1g009760 22.925 711 438 21 121 816 41 656 2.10e-41 165
MS.gene37141.t1 MTR_1g009760 23.023 708 441 21 121 816 44 659 2.12e-41 164
MS.gene37141.t1 MTR_8g063880 22.772 707 444 19 121 816 41 656 4.39e-41 164
MS.gene37141.t1 MTR_4g107500 24.065 615 371 19 219 824 140 667 1.14e-40 163
MS.gene37141.t1 MTR_6g011310 23.663 617 366 18 219 824 138 660 1.62e-40 162
MS.gene37141.t1 MTR_7g117500 22.340 752 460 23 109 847 41 681 3.01e-40 161
MS.gene37141.t1 MTR_1g009720 22.368 760 462 23 78 816 4 656 4.98e-40 160
MS.gene37141.t1 MTR_8g006790 22.843 626 364 17 219 824 144 670 3.75e-37 152
MS.gene37141.t1 MTR_5g052190 80.000 80 16 0 521 600 279 358 1.88e-32 136
MS.gene37141.t1 MTR_3g097560 23.538 684 391 21 173 779 215 843 2.46e-22 104
MS.gene37141.t1 MTR_2g090610 21.338 792 460 22 212 862 98 867 1.03e-20 99.0
MS.gene37141.t1 MTR_2g090610 21.338 792 460 22 212 862 98 867 1.37e-20 98.6
MS.gene37141.t1 MTR_2g035840 29.353 201 109 3 621 821 771 938 4.00e-18 90.5
MS.gene37141.t1 MTR_8g079250 29.032 186 100 3 636 821 785 938 6.95e-17 86.7
MS.gene37141.t1 MTR_4g094695 28.141 199 110 3 621 819 772 937 9.20e-17 86.3
MS.gene37141.t1 MTR_5g010420 30.000 190 97 5 612 798 750 906 1.05e-16 85.9
MS.gene37141.t1 MTR_8g012390 29.703 202 103 4 639 839 759 922 5.68e-16 83.6
MS.gene37141.t1 MTR_4g008640 43.564 101 51 2 580 680 76 170 3.50e-15 75.1
MS.gene37141.t1 MTR_4g112430 22.881 472 266 19 501 889 555 1011 5.02e-15 80.5
MS.gene37141.t1 MTR_5g037210 21.936 661 352 24 199 717 107 745 8.41e-13 73.6
MS.gene37141.t1 MTR_2g036380 29.193 161 84 3 638 798 356 486 5.57e-12 70.5
MS.gene37141.t1 MTR_2g036380 26.667 210 113 7 638 847 325 493 5.66e-12 70.1
MS.gene37141.t1 MTR_2g036380 26.667 210 113 7 638 847 418 586 5.97e-12 70.5
MS.gene37141.t1 MTR_2g036380 29.193 161 84 3 638 798 508 638 7.13e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37141.t1 AT3G22910 66.962 1017 307 12 12 1017 17 1015 0.0 1295
MS.gene37141.t1 AT3G63380 65.740 1007 309 10 27 1013 25 1015 0.0 1272
MS.gene37141.t1 AT4G29900 54.198 1048 436 12 6 1017 23 1062 0.0 1071
MS.gene37141.t1 AT4G29900 54.198 1048 436 12 6 1017 23 1062 0.0 1071
MS.gene37141.t1 AT5G57110 56.360 967 397 9 66 1017 110 1066 0.0 1055
MS.gene37141.t1 AT5G57110 56.360 967 397 9 66 1017 110 1066 0.0 1055
MS.gene37141.t1 AT5G57110 56.360 967 397 9 66 1017 110 1066 0.0 1055
MS.gene37141.t1 AT3G21180 52.783 1042 433 15 19 1013 44 1073 0.0 1013
MS.gene37141.t1 AT3G57330 47.101 966 475 12 57 1015 80 1016 0.0 865
MS.gene37141.t1 AT3G57330 47.101 966 475 12 57 1015 25 961 0.0 865
MS.gene37141.t1 AT2G41560 44.314 1020 521 16 6 1015 37 1019 0.0 845
MS.gene37141.t1 AT2G41560 46.195 946 470 13 80 1015 1 917 0.0 831
MS.gene37141.t1 AT2G41560 46.195 946 470 13 80 1015 1 917 0.0 831
MS.gene37141.t1 AT2G41560 46.195 946 470 13 80 1015 1 917 0.0 831
MS.gene37141.t1 AT1G27770 47.518 947 460 15 70 1004 96 1017 0.0 807
MS.gene37141.t1 AT1G27770 47.518 947 460 15 70 1004 96 1017 0.0 807
MS.gene37141.t1 AT1G27770 47.413 947 461 14 70 1004 33 954 0.0 806
MS.gene37141.t1 AT4G37640 47.396 960 470 15 56 1004 79 1014 0.0 785
MS.gene37141.t1 AT2G22950 47.009 953 456 12 70 1004 94 1015 0.0 776
MS.gene37141.t1 AT5G53010 36.354 949 523 18 70 992 140 1033 2.74e-173 535
MS.gene37141.t1 AT5G53010 36.646 644 390 9 70 712 140 766 7.47e-121 388
MS.gene37141.t1 AT1G27770 42.294 558 299 11 70 620 96 637 1.05e-118 387
MS.gene37141.t1 AT1G27770 56.958 309 128 2 701 1004 635 943 4.74e-108 358
MS.gene37141.t1 AT1G07810 32.667 851 476 24 107 885 43 868 4.10e-106 356
MS.gene37141.t1 AT1G07670 32.550 851 477 24 107 885 43 868 4.91e-106 355
MS.gene37141.t1 AT1G07670 32.550 851 477 24 107 885 43 868 4.91e-106 355
MS.gene37141.t1 AT4G00900 31.676 925 519 28 95 932 14 912 1.77e-100 340
MS.gene37141.t1 AT4G00900 31.676 925 519 28 95 932 14 912 1.77e-100 340
MS.gene37141.t1 AT1G10130 30.760 829 476 20 123 885 32 828 2.46e-87 303
MS.gene37141.t1 AT3G42640 23.753 762 460 26 79 824 8 664 1.52e-44 175
MS.gene37141.t1 AT2G24520 25.128 585 359 14 233 816 130 636 4.60e-44 173
MS.gene37141.t1 AT2G24520 25.128 585 359 14 233 816 130 636 4.60e-44 173
MS.gene37141.t1 AT2G24520 25.128 585 359 14 233 816 193 699 5.55e-44 173
MS.gene37141.t1 AT1G80660 22.936 763 467 25 82 824 5 666 3.91e-42 167
MS.gene37141.t1 AT1G80660 22.936 763 467 25 82 824 5 666 4.11e-42 167
MS.gene37141.t1 AT1G80660 22.936 763 467 25 82 824 5 666 4.64e-42 167
MS.gene37141.t1 AT3G60330 22.416 745 458 24 95 824 22 661 5.35e-42 167
MS.gene37141.t1 AT3G60330 22.416 745 458 24 95 824 22 661 5.35e-42 167
MS.gene37141.t1 AT3G60330 22.282 745 459 24 95 824 22 661 1.42e-41 166
MS.gene37141.t1 AT3G60330 22.282 745 459 24 95 824 22 661 1.42e-41 166
MS.gene37141.t1 AT1G80660 24.149 617 368 19 219 824 10 537 2.32e-41 164
MS.gene37141.t1 AT3G47950 23.387 620 369 18 219 824 142 669 2.57e-41 165
MS.gene37141.t1 AT3G47950 23.387 620 369 18 219 824 142 669 2.57e-41 165
MS.gene37141.t1 AT2G07560 22.222 738 466 22 123 847 44 686 3.05e-41 164
MS.gene37141.t1 AT5G62670 22.425 767 476 24 73 824 3 665 5.44e-41 164
MS.gene37141.t1 AT1G17260 25.589 594 344 16 233 816 156 661 7.13e-41 163
MS.gene37141.t1 AT4G30190 23.150 635 398 16 219 847 134 684 2.43e-39 159
MS.gene37141.t1 AT2G18960 23.150 635 398 17 219 847 134 684 1.10e-38 156
MS.gene37141.t1 AT2G18960 23.576 632 399 18 219 847 70 620 1.13e-38 156
MS.gene37141.t1 AT2G18960 23.576 632 399 18 219 847 70 620 1.13e-38 156
MS.gene37141.t1 AT5G57350 23.002 613 365 16 219 816 135 655 1.57e-37 153
MS.gene37141.t1 AT5G57350 23.002 613 365 16 219 816 135 655 1.57e-37 153
MS.gene37141.t1 AT5G57350 23.002 613 365 16 219 816 135 655 1.57e-37 153
MS.gene37141.t1 AT4G30190 22.590 664 399 20 219 847 134 717 8.32e-36 147
MS.gene37141.t1 AT2G24520 24.654 434 271 11 386 816 13 393 2.46e-29 125
MS.gene37141.t1 AT5G57350 23.649 444 263 12 386 816 13 393 7.71e-27 118
MS.gene37141.t1 AT5G23630 22.194 775 451 23 74 766 125 829 3.39e-24 110
MS.gene37141.t1 AT1G63440 30.435 207 108 6 618 821 764 937 4.74e-20 97.1
MS.gene37141.t1 AT5G44790 31.188 202 106 4 620 821 780 948 6.01e-18 90.1
MS.gene37141.t1 AT4G11730 23.950 238 153 5 219 455 135 345 9.21e-15 79.7
MS.gene37141.t1 AT4G30110 27.143 210 113 4 638 847 510 679 1.81e-14 79.0
MS.gene37141.t1 AT4G30110 27.143 210 113 4 638 847 510 679 1.81e-14 79.0
MS.gene37141.t1 AT2G19110 26.383 235 131 6 639 873 521 713 5.06e-13 74.3
MS.gene37141.t1 AT2G19110 26.383 235 131 6 639 873 521 713 5.06e-13 74.3
MS.gene37141.t1 AT2G19110 26.383 235 131 6 639 873 521 713 5.06e-13 74.3

Find 163 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACAGCAGTTCAATTATTA+TGG 0.156185 6.2:-11773259 MS.gene37141:CDS
AAAAGTGATGATCATGATTT+TGG 0.160050 6.2:-11775634 MS.gene37141:CDS
TCATGAAAATCTATTGTTCT+AGG 0.205768 6.2:-11775864 MS.gene37141:CDS
TGAGTTTAATGCAAGGAAAT+TGG 0.225227 6.2:-11772976 MS.gene37141:CDS
ATTATGGGTGAATTTGATTA+TGG 0.241738 6.2:-11773243 MS.gene37141:CDS
AATAATTGAACTGCTGTTAA+TGG 0.244697 6.2:+11773263 None:intergenic
ACTCTCTGCATGTGAAACTA+TGG 0.251944 6.2:-11774690 MS.gene37141:CDS
AAAACCTACTAAGGAATTAA+TGG 0.259126 6.2:-11773189 MS.gene37141:CDS
GTTAGGGCTTGTCGGTATTA+AGG 0.265803 6.2:-11773965 MS.gene37141:CDS
GTTCAATGTTTAAAACAAAA+AGG 0.271876 6.2:-11773560 MS.gene37141:CDS
AATACTATCTTGGGCTGTTT+TGG 0.272622 6.2:-11774346 MS.gene37141:CDS
GACAATGATTTAACATTGTT+AGG 0.284588 6.2:-11773982 MS.gene37141:CDS
TCCATTTGACAAACTTCTAA+TGG 0.296674 6.2:-11773582 MS.gene37141:CDS
TTTGGAATTGAAAATGGATA+TGG 0.303373 6.2:-11774328 MS.gene37141:CDS
GAGTTAACAATATTACTATT+TGG 0.303748 6.2:+11773090 None:intergenic
TCCCATTGAAAGACCGATAT+CGG 0.305491 6.2:+11773481 None:intergenic
GTTTCATCTGTGTCCTCATT+AGG 0.309923 6.2:+11773692 None:intergenic
AGATGAAGGTGACAAAGTTT+TGG 0.310163 6.2:-11774533 MS.gene37141:CDS
TGTAACAATTATAATCCTTT+TGG 0.311230 6.2:-11775515 MS.gene37141:CDS
CACCCTCTTCCAATGGTTCT+AGG 0.318701 6.2:+11774505 None:intergenic
GGTGTTCACAAATCGAAATT+AGG 0.326696 6.2:-11774414 MS.gene37141:CDS
TGGATTATTTGTATTGGTTT+TGG 0.330074 6.2:-11772816 MS.gene37141:CDS
CACATAATGTTAGTTATAAG+AGG 0.361954 6.2:+11773140 None:intergenic
CTGGTACAGAAAGGTTGAAT+TGG 0.367852 6.2:-11772845 MS.gene37141:CDS
TTATCCATTAATTCCTTAGT+AGG 0.369250 6.2:+11773185 None:intergenic
GGCCATGTAGTTGCTGTAAC+AGG 0.373182 6.2:-11773539 MS.gene37141:CDS
GCTGATGGATTGTTTGTTGA+TGG 0.380229 6.2:-11775220 MS.gene37141:CDS
AAAGGTTGAATTGGAGAGAA+TGG 0.383579 6.2:-11772836 MS.gene37141:CDS
AACAGCAGTTCAATTATTAT+GGG 0.388612 6.2:-11773258 MS.gene37141:CDS
AATTTGATTATGGATACATT+AGG 0.389466 6.2:-11773233 MS.gene37141:CDS
GTTATCGTTCTTTGTGTTCC+CGG 0.391672 6.2:+11774898 None:intergenic
GTGAATGTCAAAATGATTAC+AGG 0.392744 6.2:-11773889 MS.gene37141:intron
GGTGCTGTTTCTTGGCCAAT+TGG 0.393140 6.2:-11772795 MS.gene37141:CDS
GATGTTGTTTGTTTGAAGAT+TGG 0.403237 6.2:-11775256 MS.gene37141:CDS
TCTAGATACTATGATGGTTA+TGG 0.403935 6.2:-11774159 MS.gene37141:CDS
AGAGGCTTTGTTCTACCAAC+TGG 0.413768 6.2:+11773158 None:intergenic
ATCGATCGGAAAAGTTGGTT+TGG 0.416711 6.2:-11774966 MS.gene37141:CDS
ACCATTAGAAGTTTGTCAAA+TGG 0.418812 6.2:+11773581 None:intergenic
GCAATTAGGAAAGAAGTGTT+TGG 0.428317 6.2:-11775604 MS.gene37141:CDS
AGAGAATGGATTATTTGTAT+TGG 0.428342 6.2:-11772822 MS.gene37141:CDS
CAAAATCATGGTGGAGTTGA+AGG 0.433331 6.2:-11775697 MS.gene37141:CDS
CATGAAAATCTATTGTTCTA+GGG 0.434432 6.2:-11775863 MS.gene37141:CDS
TATGAGAGTTTCTTGATCAA+TGG 0.439612 6.2:+11775753 None:intergenic
ACAATGATTTAACATTGTTA+GGG 0.444141 6.2:-11773981 MS.gene37141:CDS
CGAAAGCATTATTCAAGGTA+TGG 0.444612 6.2:-11774097 MS.gene37141:CDS
ACTATTTGCACCGACAAAAC+AGG 0.445850 6.2:-11774656 MS.gene37141:intron
GTTATTCAATTGATCAAAGA+AGG 0.446882 6.2:-11774459 MS.gene37141:CDS
TCCACCGCTTTCTTCACCCC+TGG 0.447188 6.2:+11773931 None:intergenic
TCAATATTTGATATTGTTGT+TGG 0.451599 6.2:-11775280 MS.gene37141:CDS
AACTTAACAACAAAACCAAT+TGG 0.455892 6.2:+11772780 None:intergenic
AAATGAATGAAACTCTTAGA+AGG 0.456724 6.2:+11775559 None:intergenic
CATCTGTGTCCTCATTAGGT+TGG 0.458267 6.2:+11773696 None:intergenic
AGCCGATATCGGTCTTTCAA+TGG 0.458474 6.2:-11773483 MS.gene37141:CDS
GCTACACTTTCACTTGGCTT+CGG 0.461584 6.2:-11775487 MS.gene37141:CDS
CTCTTGATTCGATATTTCAC+CGG 0.466260 6.2:-11774917 MS.gene37141:CDS
TCACAAATCGAAATTAGGTT+CGG 0.474435 6.2:-11774409 MS.gene37141:CDS
TCGAAGTGGTCGTCGGCTAA+AGG 0.475830 6.2:-11775305 MS.gene37141:CDS
TATGGATACATTAGGTGCAT+TGG 0.476382 6.2:-11773225 MS.gene37141:CDS
AAATTCGAAAGCATTATTCA+AGG 0.477862 6.2:-11774102 MS.gene37141:CDS
GTTTGTGCTACACTTTCACT+TGG 0.479286 6.2:-11775493 MS.gene37141:CDS
TTCGTAGCCGCGGTTTCAGC+CGG 0.480048 6.2:-11773293 MS.gene37141:CDS
GGTCTTTCAATGGGAATTCA+AGG 0.480265 6.2:-11773473 MS.gene37141:CDS
ACAGCCAATGGCAAACCCTC+AGG 0.480432 6.2:+11774773 None:intergenic
TTAACATTGTTAGGGCTTGT+CGG 0.483188 6.2:-11773973 MS.gene37141:CDS
GCCGATATCGGTCTTTCAAT+GGG 0.484090 6.2:-11773482 MS.gene37141:CDS
GGAGTTGCACTGAATACAAC+TGG 0.486452 6.2:-11774438 MS.gene37141:CDS
TGCTCCTTTCCAATGTGCAA+TGG 0.488505 6.2:+11774206 None:intergenic
AAATCAACCACGGTGAAAGA+TGG 0.493237 6.2:+11775796 None:intergenic
ATTGACACACTTCAAAATCA+TGG 0.494685 6.2:-11775709 MS.gene37141:CDS
TTCTTCACCCCTGGACGACA+TGG 0.495536 6.2:+11773940 None:intergenic
AATCCCTGAGGGTTTGCCAT+TGG 0.496676 6.2:-11774777 MS.gene37141:CDS
ACAGATGAAACCGTGGTTGA+AGG 0.498794 6.2:-11773680 MS.gene37141:CDS
TTGTTAACTCTTCAATTCAA+AGG 0.499732 6.2:-11773077 MS.gene37141:CDS
AGAAATGGTTTATCTGAGAC+AGG 0.500250 6.2:+11772753 None:intergenic
CTTAAAACCAACATTGAGCT+TGG 0.501250 6.2:-11775661 MS.gene37141:CDS
GATGTGATGAATGCAATCAT+TGG 0.502365 6.2:-11774836 MS.gene37141:CDS
GTTGATGAATCGAGCATGAC+CGG 0.505360 6.2:-11775184 MS.gene37141:CDS
TTGATCAATTGAATAACAGA+TGG 0.505444 6.2:+11774465 None:intergenic
ATTAAGGATCCATGTCGTCC+AGG 0.505479 6.2:-11773949 MS.gene37141:CDS
TTGGCTTGGCCTAGAACCAT+TGG 0.506606 6.2:-11774514 MS.gene37141:CDS
ACATCATCGATCGGAAAAGT+TGG 0.506780 6.2:-11774971 MS.gene37141:CDS
GGGAATTATTGGTGTGACAT+TGG 0.515181 6.2:-11772907 MS.gene37141:CDS
CGGAATTCTCCAACCTAATG+AGG 0.515315 6.2:-11773705 MS.gene37141:CDS
TGCTGTTAATGGTACTTCAC+CGG 0.516236 6.2:+11773274 None:intergenic
CAGTCGGTATGAACACAACA+TGG 0.516388 6.2:-11775066 MS.gene37141:CDS
AGGAAACACCTTTGCAAACA+AGG 0.518086 6.2:-11775006 MS.gene37141:CDS
CTCTCTGCATGTGAAACTAT+GGG 0.521438 6.2:-11774689 MS.gene37141:CDS
GCATTGAAAGAAGCCGATAT+CGG 0.523732 6.2:-11773494 MS.gene37141:CDS
ATTGGTTCTTCAAGTTGTGA+TGG 0.528027 6.2:-11772889 MS.gene37141:CDS
AGAAGTTTGCTGGTACAGAA+AGG 0.529712 6.2:-11772854 MS.gene37141:CDS
CTCTTATAACTAACATTATG+TGG 0.531696 6.2:-11773139 MS.gene37141:CDS
AAATTGTTCGCCTTCAACCA+CGG 0.532190 6.2:+11773670 None:intergenic
ATATCGGCTTCTTTCAATGC+CGG 0.532373 6.2:+11773497 None:intergenic
AAAGTGTAGCACAAACCAAA+AGG 0.534473 6.2:+11775500 None:intergenic
GAATATGCACCCTCTTCCAA+TGG 0.534520 6.2:+11774498 None:intergenic
GTTGTTGTTGCAATCCCTGA+GGG 0.536567 6.2:-11774788 MS.gene37141:CDS
AAAATGCTTGTTACATCAGT+CGG 0.537117 6.2:-11775082 MS.gene37141:CDS
GCAGACGAAGAGCTTGGAGA+TGG 0.537228 6.2:-11774030 MS.gene37141:CDS
AACTCAAAGAAGAAAAGAAG+TGG 0.537966 6.2:-11774261 MS.gene37141:CDS
ATAACACACACAACAAAAGA+TGG 0.538699 6.2:-11775897 MS.gene37141:CDS
TTGGAAAGGAGCAGCAGAGA+TGG 0.539480 6.2:-11774196 MS.gene37141:CDS
AACTCTTCAATTCAAAGGTG+AGG 0.539506 6.2:-11773072 MS.gene37141:CDS
TTAAGGATCCATGTCGTCCA+GGG 0.540918 6.2:-11773948 MS.gene37141:CDS
GTAGTTGCTGTAACAGGAGA+TGG 0.541746 6.2:-11773533 MS.gene37141:CDS
TTATTTAACCTTGTTTGCAA+AGG 0.541916 6.2:+11774998 None:intergenic
AAAGTCGCAGACGAAGAGCT+TGG 0.546151 6.2:-11774036 MS.gene37141:CDS
TTTGATACCAAGCTCAATGT+TGG 0.549491 6.2:+11775654 None:intergenic
TGGCCTAGAACCATTGGAAG+AGG 0.550668 6.2:-11774508 MS.gene37141:CDS
GAAGATTGGTGATCAAGTAC+CGG 0.553519 6.2:-11775242 MS.gene37141:CDS
AAGCAACATGGAATCAAAGA+AGG 0.557387 6.2:-11775460 MS.gene37141:CDS
ATTTAGTTCGAAGTGGTCGT+CGG 0.558728 6.2:-11775312 MS.gene37141:CDS
CTCCTGTTACAGCAACTACA+TGG 0.559264 6.2:+11773537 None:intergenic
AGTGTCAATGTCACAGCCAA+TGG 0.560660 6.2:+11774761 None:intergenic
CTCTACATGATCGCTCTCAC+CGG 0.560784 6.2:+11775165 None:intergenic
CAAATTGATTTAGTTCGAAG+TGG 0.561336 6.2:-11775319 MS.gene37141:CDS
GGTGATCAAGTACCGGCTGA+TGG 0.561728 6.2:-11775235 MS.gene37141:CDS
AACATGGAATCAAAGAAGGT+TGG 0.561800 6.2:-11775456 MS.gene37141:CDS
TTATTCAATGAAGAAAATGA+TGG 0.562067 6.2:-11774735 MS.gene37141:CDS
GTGGAAGCTTGCCAACATGC+CGG 0.573699 6.2:-11773913 MS.gene37141:CDS
AGATGGAACAAATGATGCAC+CGG 0.583689 6.2:-11773516 MS.gene37141:CDS
ATTTCAACTAACAGTGAATG+TGG 0.583772 6.2:-11773333 MS.gene37141:CDS
ACTCACTTTGAATCAGATGA+AGG 0.584042 6.2:-11774547 MS.gene37141:CDS
TACTTCACCGGCTGAAACCG+CGG 0.586833 6.2:+11773286 None:intergenic
ATGTGTTCTAGATACTATGA+TGG 0.587273 6.2:-11774165 MS.gene37141:CDS
ATCAAAGAAGGTTGGTACGA+TGG 0.587881 6.2:-11775448 MS.gene37141:CDS
TGACATTCACACCGGCATGT+TGG 0.590504 6.2:+11773902 None:intergenic
AAAACCATTGCACATTGGAA+AGG 0.591649 6.2:-11774210 MS.gene37141:CDS
TCTTGATTCGATATTTCACC+GGG 0.593878 6.2:-11774916 MS.gene37141:CDS
TCGGGGACAAAAGTTGTCGA+TGG 0.594676 6.2:-11775112 MS.gene37141:CDS
GGGAACACAAAGAACGATAA+CGG 0.596800 6.2:-11774896 MS.gene37141:CDS
TCAACAAACAATCCATCAGC+CGG 0.611306 6.2:+11775223 None:intergenic
AACGGAGTTAGAGAGTTCAA+TGG 0.612794 6.2:-11774878 MS.gene37141:CDS
TGAATGAAACTCTTAGAAGG+TGG 0.617800 6.2:+11775562 None:intergenic
AATAAGCTAACATCATCGAT+CGG 0.622025 6.2:-11774980 MS.gene37141:CDS
CAGCCAATGGCAAACCCTCA+GGG 0.622410 6.2:+11774774 None:intergenic
ACAACAAAACCATTGCACAT+TGG 0.624200 6.2:-11774215 MS.gene37141:CDS
GGCCTAGAACCATTGGAAGA+GGG 0.626892 6.2:-11774507 MS.gene37141:CDS
TGTTATCAATTTCGTAGCCG+CGG 0.628690 6.2:-11773303 MS.gene37141:CDS
TGTTTAATGAGTTTAATGCA+AGG 0.630387 6.2:-11772983 MS.gene37141:CDS
CGGTGAAATATCGAATCAAG+AGG 0.636963 6.2:+11774918 None:intergenic
AGATGGAGACAATAACAAGA+TGG 0.640541 6.2:-11774013 MS.gene37141:CDS
ATCGAATCAAGAGGACAACA+AGG 0.647993 6.2:+11774927 None:intergenic
AAAGAAGGTTGGTACGATGG+TGG 0.649548 6.2:-11775445 MS.gene37141:CDS
TTATAACTAACATTATGTGG+AGG 0.663994 6.2:-11773136 MS.gene37141:CDS
TGGAGACAATAACAAGATGG+TGG 0.664988 6.2:-11774010 MS.gene37141:CDS
TCGTCCAGGGGTGAAGAAAG+CGG 0.665154 6.2:-11773935 MS.gene37141:CDS
TGTTGTTGTTGCAATCCCTG+AGG 0.666153 6.2:-11774789 MS.gene37141:CDS
GGCTTCGGTATCAAGCAACA+TGG 0.671284 6.2:-11775472 MS.gene37141:CDS
TAAGGATCCATGTCGTCCAG+GGG 0.675223 6.2:-11773947 MS.gene37141:CDS
TCCAGGGGTGAAGAAAGCGG+TGG 0.675734 6.2:-11773932 MS.gene37141:CDS
AGTCGGTATGAACACAACAT+GGG 0.677436 6.2:-11775065 MS.gene37141:CDS
AATGATGGCTGATCAAGCAA+TGG 0.680846 6.2:-11774720 MS.gene37141:CDS
GTCGGTATGAACACAACATG+GGG 0.693538 6.2:-11775064 MS.gene37141:CDS
TGATCAATGGTAAAAGAGTG+TGG 0.699257 6.2:+11775766 None:intergenic
ACCTACTCCATCTTTCACCG+TGG 0.705281 6.2:-11775803 MS.gene37141:CDS
ACCACGGTGAAAGATGGAGT+AGG 0.718242 6.2:+11775802 None:intergenic
TGGTGGATTTAAATCAACCA+CGG 0.718660 6.2:+11775786 None:intergenic
AAAGCTATAGCATTTGAATG+CGG 0.727776 6.2:-11773725 MS.gene37141:CDS
GACACACTTCAAAATCATGG+TGG 0.728470 6.2:-11775706 MS.gene37141:CDS
TGAGGACACAGATGAAACCG+TGG 0.741833 6.2:-11773687 MS.gene37141:CDS
AATAAGCAATGACATCGACG+AGG 0.760288 6.2:-11775026 MS.gene37141:CDS
TCAATGGTAAAAGAGTGTGG+TGG 0.763849 6.2:+11775769 None:intergenic
GTTGCACTGAATACAACTGG+TGG 0.806769 6.2:-11774435 MS.gene37141:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTAAAAAAATCAAGAAA+TGG + chr6.2:11775954-11775973 None:intergenic 15.0%
!! AATTTGATTATGGATACATT+AGG - chr6.2:11775456-11775475 MS.gene37141:CDS 20.0%
!! ACAATGATTTAACATTGTTA+GGG - chr6.2:11774708-11774727 MS.gene37141:CDS 20.0%
!! GAGTTAACAATATTACTATT+TGG + chr6.2:11775602-11775621 None:intergenic 20.0%
!! TCAATATTTGATATTGTTGT+TGG - chr6.2:11773409-11773428 MS.gene37141:CDS 20.0%
!! TTATTCAATGAAGAAAATGA+TGG - chr6.2:11773954-11773973 MS.gene37141:CDS 20.0%
!!! GTTCAATGTTTAAAACAAAA+AGG - chr6.2:11775129-11775148 MS.gene37141:CDS 20.0%
!!! TATAGTAACAGTTTTAAACT+GGG - chr6.2:11775296-11775315 MS.gene37141:CDS 20.0%
!!! TGTAACAATTATAATCCTTT+TGG - chr6.2:11773174-11773193 MS.gene37141:CDS 20.0%
!!! TTTTGTTATTGAAGCTTTTA+AGG - chr6.2:11773150-11773169 MS.gene37141:CDS 20.0%
! AAAACCTACTAAGGAATTAA+TGG - chr6.2:11775500-11775519 MS.gene37141:CDS 25.0%
! AAATGAATGAAACTCTTAGA+AGG + chr6.2:11773133-11773152 None:intergenic 25.0%
! AAATTACGATAAAAACAGCT+AGG + chr6.2:11773279-11773298 None:intergenic 25.0%
! AACAGCAGTTCAATTATTAT+GGG - chr6.2:11775431-11775450 MS.gene37141:CDS 25.0%
! AACTTAACAACAAAACCAAT+TGG + chr6.2:11775912-11775931 None:intergenic 25.0%
! AATAATTGAACTGCTGTTAA+TGG + chr6.2:11775429-11775448 None:intergenic 25.0%
! AGAAAAAGCAATACTATCTT+GGG - chr6.2:11774334-11774353 MS.gene37141:CDS 25.0%
! ATTATGGGTGAATTTGATTA+TGG - chr6.2:11775446-11775465 MS.gene37141:CDS 25.0%
! CACATAATGTTAGTTATAAG+AGG + chr6.2:11775552-11775571 None:intergenic 25.0%
! CATGAAAATCTATTGTTCTA+GGG - chr6.2:11772826-11772845 MS.gene37141:CDS 25.0%
! CTCTTATAACTAACATTATG+TGG - chr6.2:11775550-11775569 MS.gene37141:CDS 25.0%
! GACAATGATTTAACATTGTT+AGG - chr6.2:11774707-11774726 MS.gene37141:CDS 25.0%
! GTTATTCAATTGATCAAAGA+AGG - chr6.2:11774230-11774249 MS.gene37141:CDS 25.0%
! TAACAGCAGTTCAATTATTA+TGG - chr6.2:11775430-11775449 MS.gene37141:CDS 25.0%
! TCATGAAAATCTATTGTTCT+AGG - chr6.2:11772825-11772844 MS.gene37141:CDS 25.0%
! TGTTTAATGAGTTTAATGCA+AGG - chr6.2:11775706-11775725 MS.gene37141:CDS 25.0%
! TTATAACTAACATTATGTGG+AGG - chr6.2:11775553-11775572 MS.gene37141:CDS 25.0%
! TTATCCATTAATTCCTTAGT+AGG + chr6.2:11775507-11775526 None:intergenic 25.0%
! TTGATCAATTGAATAACAGA+TGG + chr6.2:11774227-11774246 None:intergenic 25.0%
! TTGTTAACTCTTCAATTCAA+AGG - chr6.2:11775612-11775631 MS.gene37141:CDS 25.0%
!! AAAAGTGATGATCATGATTT+TGG - chr6.2:11773055-11773074 MS.gene37141:CDS 25.0%
!! TCTGAAAAGTGATTTGTAAT+AGG - chr6.2:11774116-11774135 MS.gene37141:CDS 25.0%
!! TTAATGGATAAAAAACCAGT+TGG - chr6.2:11775516-11775535 MS.gene37141:CDS 25.0%
!! TTATTTAACCTTGTTTGCAA+AGG + chr6.2:11773694-11773713 None:intergenic 25.0%
!! TTTGGAATTGAAAATGGATA+TGG - chr6.2:11774361-11774380 MS.gene37141:CDS 25.0%
!!! AAATTCGAAAGCATTATTCA+AGG - chr6.2:11774587-11774606 MS.gene37141:intron 25.0%
!!! AAGTTGTTTTTGGGAATTAT+TGG - chr6.2:11775771-11775790 MS.gene37141:CDS 25.0%
!!! AGAAGAAGAATGTTTTTGAA+GGG - chr6.2:11775736-11775755 MS.gene37141:CDS 25.0%
!!! AGAGAATGGATTATTTGTAT+TGG - chr6.2:11775867-11775886 MS.gene37141:CDS 25.0%
!!! ATAGTAACAGTTTTAAACTG+GGG - chr6.2:11775297-11775316 MS.gene37141:CDS 25.0%
!!! CTATAGTAACAGTTTTAAAC+TGG - chr6.2:11775295-11775314 MS.gene37141:CDS 25.0%
!!! TGGATTATTTGTATTGGTTT+TGG - chr6.2:11775873-11775892 MS.gene37141:CDS 25.0%
!!! TTTAAGAGCAAGTTGTTTTT+GGG - chr6.2:11775762-11775781 MS.gene37141:CDS 25.0%
!!! TTTTAAGAGCAAGTTGTTTT+TGG - chr6.2:11775761-11775780 MS.gene37141:CDS 25.0%
!!! TTTTCATCCTTTTTTGCTTT+CGG - chr6.2:11773558-11773577 MS.gene37141:CDS 25.0%
AAAGCTATAGCATTTGAATG+CGG - chr6.2:11774964-11774983 MS.gene37141:CDS 30.0%
AACTCAAAGAAGAAAAGAAG+TGG - chr6.2:11774428-11774447 MS.gene37141:CDS 30.0%
AATAAGCTAACATCATCGAT+CGG - chr6.2:11773709-11773728 MS.gene37141:CDS 30.0%
ACCATTAGAAGTTTGTCAAA+TGG + chr6.2:11775111-11775130 None:intergenic 30.0%
AGACACGTATGTATAAATAG+AGG + chr6.2:11774887-11774906 None:intergenic 30.0%
AGTCGAAAAAATATCTGTGA+TGG - chr6.2:11775074-11775093 MS.gene37141:CDS 30.0%
ATAACACACACAACAAAAGA+TGG - chr6.2:11772792-11772811 MS.gene37141:CDS 30.0%
ATTGACACACTTCAAAATCA+TGG - chr6.2:11772980-11772999 MS.gene37141:CDS 30.0%
ATTTCAACTAACAGTGAATG+TGG - chr6.2:11775356-11775375 MS.gene37141:CDS 30.0%
CAGAAAAAGCAATACTATCT+TGG - chr6.2:11774333-11774352 MS.gene37141:CDS 30.0%
CTATAATCAGAGATAGAGTT+CGG + chr6.2:11774924-11774943 None:intergenic 30.0%
GTGAATGTCAAAATGATTAC+AGG - chr6.2:11774800-11774819 MS.gene37141:CDS 30.0%
TATGAGAGTTTCTTGATCAA+TGG + chr6.2:11772939-11772958 None:intergenic 30.0%
TCACAAATCGAAATTAGGTT+CGG - chr6.2:11774280-11774299 MS.gene37141:CDS 30.0%
TCCATTTGACAAACTTCTAA+TGG - chr6.2:11775107-11775126 MS.gene37141:CDS 30.0%
TCGTTCATGTTTGTGAAAAA+TGG + chr6.2:11772737-11772756 None:intergenic 30.0%
TCTAGATACTATGATGGTTA+TGG - chr6.2:11774530-11774549 MS.gene37141:CDS 30.0%
TGAGTTTAATGCAAGGAAAT+TGG - chr6.2:11775713-11775732 MS.gene37141:CDS 30.0%
! AAAATGCTTGTTACATCAGT+CGG - chr6.2:11773607-11773626 MS.gene37141:CDS 30.0%
! ATGTGTTCTAGATACTATGA+TGG - chr6.2:11774524-11774543 MS.gene37141:CDS 30.0%
! CAAATTGATTTAGTTCGAAG+TGG - chr6.2:11773370-11773389 MS.gene37141:CDS 30.0%
! GATGTTGTTTGTTTGAAGAT+TGG - chr6.2:11773433-11773452 MS.gene37141:CDS 30.0%
! TTCAAAGGTGAGGATATTTT+TGG - chr6.2:11775627-11775646 MS.gene37141:CDS 30.0%
! TTCAATAGTACCTGTTTTGT+CGG + chr6.2:11774046-11774065 None:intergenic 30.0%
!! AATCATTTTGACATTCACAC+CGG + chr6.2:11774798-11774817 None:intergenic 30.0%
!! ACTTTTTCTAATCTCTCTTC+GGG + chr6.2:11775057-11775076 None:intergenic 30.0%
!! ATTTTGGAGACATTGCAATT+AGG - chr6.2:11773071-11773090 MS.gene37141:CDS 30.0%
!! GACTTTTTCTAATCTCTCTT+CGG + chr6.2:11775058-11775077 None:intergenic 30.0%
!! GAGAAGAAGAATGTTTTTGA+AGG - chr6.2:11775735-11775754 MS.gene37141:CDS 30.0%
!! TCTTTTGTTGTGTGTGTTAT+TGG + chr6.2:11772792-11772811 None:intergenic 30.0%
!!! AGGTGGTTTTTTGTAATTGT+TGG + chr6.2:11773113-11773132 None:intergenic 30.0%
!!! GATAGTATTGCTTTTTCTGT+TGG + chr6.2:11774332-11774351 None:intergenic 30.0%
!!! TATTTTTGGTGTGACATCAA+AGG - chr6.2:11775641-11775660 MS.gene37141:CDS 30.0%
!!! TGTGTGTTATTGGTGTTTTT+TGG + chr6.2:11772782-11772801 None:intergenic 30.0%
!!! TTTCATCCTTTTTTGCTTTC+GGG - chr6.2:11773559-11773578 MS.gene37141:CDS 30.0%
AAAACCATTGCACATTGGAA+AGG - chr6.2:11774479-11774498 MS.gene37141:CDS 35.0%
AAAGGTTGAATTGGAGAGAA+TGG - chr6.2:11775853-11775872 MS.gene37141:CDS 35.0%
AAAGTGTAGCACAAACCAAA+AGG + chr6.2:11773192-11773211 None:intergenic 35.0%
AACATGGAATCAAAGAAGGT+TGG - chr6.2:11773233-11773252 MS.gene37141:CDS 35.0%
AACTCTTCAATTCAAAGGTG+AGG - chr6.2:11775617-11775636 MS.gene37141:CDS 35.0%
AAGCAACATGGAATCAAAGA+AGG - chr6.2:11773229-11773248 MS.gene37141:CDS 35.0%
ACAACAAAACCATTGCACAT+TGG - chr6.2:11774474-11774493 MS.gene37141:CDS 35.0%
ACTCACTTTGAATCAGATGA+AGG - chr6.2:11774142-11774161 MS.gene37141:CDS 35.0%
AGATGGAGACAATAACAAGA+TGG - chr6.2:11774676-11774695 MS.gene37141:CDS 35.0%
CGAACTCTATCTCTGATTAT+AGG - chr6.2:11774922-11774941 MS.gene37141:CDS 35.0%
CTTAAAACCAACATTGAGCT+TGG - chr6.2:11773028-11773047 MS.gene37141:CDS 35.0%
GATGTGATGAATGCAATCAT+TGG - chr6.2:11773853-11773872 MS.gene37141:intron 35.0%
GGTGTTCACAAATCGAAATT+AGG - chr6.2:11774275-11774294 MS.gene37141:CDS 35.0%
TATGGATACATTAGGTGCAT+TGG - chr6.2:11775464-11775483 MS.gene37141:CDS 35.0%
TGAATGAAACTCTTAGAAGG+TGG + chr6.2:11773130-11773149 None:intergenic 35.0%
TGATCAATGGTAAAAGAGTG+TGG + chr6.2:11772926-11772945 None:intergenic 35.0%
TGCAACTGAAAAACCTACTA+AGG - chr6.2:11775491-11775510 MS.gene37141:CDS 35.0%
TTAACATTGTTAGGGCTTGT+CGG - chr6.2:11774716-11774735 MS.gene37141:CDS 35.0%
TTTGATACCAAGCTCAATGT+TGG + chr6.2:11773038-11773057 None:intergenic 35.0%
! AATACTATCTTGGGCTGTTT+TGG - chr6.2:11774343-11774362 MS.gene37141:CDS 35.0%
! AGAAATGGTTTATCTGAGAC+AGG + chr6.2:11775939-11775958 None:intergenic 35.0%
! AGATGAAGGTGACAAAGTTT+TGG - chr6.2:11774156-11774175 MS.gene37141:CDS 35.0%
! CTCTTGATTCGATATTTCAC+CGG - chr6.2:11773772-11773791 MS.gene37141:intron 35.0%
! TCTTGATTCGATATTTCACC+GGG - chr6.2:11773773-11773792 MS.gene37141:intron 35.0%
!! AGGTGTGATTTTCTGTTTCT+TGG + chr6.2:11772870-11772889 None:intergenic 35.0%
!! ATTGGTTCTTCAAGTTGTGA+TGG - chr6.2:11775800-11775819 MS.gene37141:CDS 35.0%
!! CGAAAGCATTATTCAAGGTA+TGG - chr6.2:11774592-11774611 MS.gene37141:intron 35.0%
!! GAGTTTTTGAAGAAGTTTGC+TGG - chr6.2:11775825-11775844 MS.gene37141:CDS 35.0%
!! GATTCTGAATTCGAGTTTTC+AGG - chr6.2:11774302-11774321 MS.gene37141:CDS 35.0%
!! GCAATTAGGAAAGAAGTGTT+TGG - chr6.2:11773085-11773104 MS.gene37141:CDS 35.0%
!! TGGTGGATTTAAATCAACCA+CGG + chr6.2:11772906-11772925 None:intergenic 35.0%
!!! GGCTGTTTTGGAATTGAAAA+TGG - chr6.2:11774355-11774374 MS.gene37141:CDS 35.0%
!!! TTCATCCTTTTTTGCTTTCG+GGG - chr6.2:11773560-11773579 MS.gene37141:CDS 35.0%
AAATCAACCACGGTGAAAGA+TGG + chr6.2:11772896-11772915 None:intergenic 40.0%
AAATTGTTCGCCTTCAACCA+CGG + chr6.2:11775022-11775041 None:intergenic 40.0%
AACGGAGTTAGAGAGTTCAA+TGG - chr6.2:11773811-11773830 MS.gene37141:intron 40.0%
AATAAGCAATGACATCGACG+AGG - chr6.2:11773663-11773682 MS.gene37141:CDS 40.0%
AATGATGGCTGATCAAGCAA+TGG - chr6.2:11773969-11773988 MS.gene37141:CDS 40.0%
ACATCATCGATCGGAAAAGT+TGG - chr6.2:11773718-11773737 MS.gene37141:CDS 40.0%
ACTCTCTGCATGTGAAACTA+TGG - chr6.2:11773999-11774018 MS.gene37141:CDS 40.0%
AGATGGAACAAATGATGCAC+CGG - chr6.2:11775173-11775192 MS.gene37141:CDS 40.0%
AGGAAACACCTTTGCAAACA+AGG - chr6.2:11773683-11773702 MS.gene37141:CDS 40.0%
AGTCGGTATGAACACAACAT+GGG - chr6.2:11773624-11773643 MS.gene37141:CDS 40.0%
ATCGAATCAAGAGGACAACA+AGG + chr6.2:11773765-11773784 None:intergenic 40.0%
CGGTGAAATATCGAATCAAG+AGG + chr6.2:11773774-11773793 None:intergenic 40.0%
CTCTCTGCATGTGAAACTAT+GGG - chr6.2:11774000-11774019 MS.gene37141:CDS 40.0%
CTGGTACAGAAAGGTTGAAT+TGG - chr6.2:11775844-11775863 MS.gene37141:CDS 40.0%
GACACACTTCAAAATCATGG+TGG - chr6.2:11772983-11773002 MS.gene37141:CDS 40.0%
GCATTGAAAGAAGCCGATAT+CGG - chr6.2:11775195-11775214 MS.gene37141:CDS 40.0%
GGGAACACAAAGAACGATAA+CGG - chr6.2:11773793-11773812 MS.gene37141:intron 40.0%
GGGAATTATTGGTGTGACAT+TGG - chr6.2:11775782-11775801 MS.gene37141:CDS 40.0%
GGTCTTTCAATGGGAATTCA+AGG - chr6.2:11775216-11775235 MS.gene37141:CDS 40.0%
GTTATCGTTCTTTGTGTTCC+CGG + chr6.2:11773794-11773813 None:intergenic 40.0%
GTTTCATCTGTGTCCTCATT+AGG + chr6.2:11775000-11775019 None:intergenic 40.0%
GTTTGTGCTACACTTTCACT+TGG - chr6.2:11773196-11773215 MS.gene37141:CDS 40.0%
TCAACAAACAATCCATCAGC+CGG + chr6.2:11773469-11773488 None:intergenic 40.0%
TCCCATTGAAAGACCGATAT+CGG + chr6.2:11775211-11775230 None:intergenic 40.0%
TGCTGTTAATGGTACTTCAC+CGG + chr6.2:11775418-11775437 None:intergenic 40.0%
TGGAGACAATAACAAGATGG+TGG - chr6.2:11774679-11774698 MS.gene37141:CDS 40.0%
TGTTATCAATTTCGTAGCCG+CGG - chr6.2:11775386-11775405 MS.gene37141:CDS 40.0%
TTTGTCCCCGAAAGCAAAAA+AGG + chr6.2:11773568-11773587 None:intergenic 40.0%
! ACTATTTGCACCGACAAAAC+AGG - chr6.2:11774033-11774052 MS.gene37141:CDS 40.0%
! ATCGATCGGAAAAGTTGGTT+TGG - chr6.2:11773723-11773742 MS.gene37141:CDS 40.0%
! ATTTAGTTCGAAGTGGTCGT+CGG - chr6.2:11773377-11773396 MS.gene37141:CDS 40.0%
! CAAAATCATGGTGGAGTTGA+AGG - chr6.2:11772992-11773011 MS.gene37141:CDS 40.0%
! GAAGATTGGTGATCAAGTAC+CGG - chr6.2:11773447-11773466 MS.gene37141:CDS 40.0%
! TCAATGGTAAAAGAGTGTGG+TGG + chr6.2:11772923-11772942 None:intergenic 40.0%
!! AGAAGTTTGCTGGTACAGAA+AGG - chr6.2:11775835-11775854 MS.gene37141:CDS 40.0%
!! ATATCGGCTTCTTTCAATGC+CGG + chr6.2:11775195-11775214 None:intergenic 40.0%
!! ATCAAAGAAGGTTGGTACGA+TGG - chr6.2:11773241-11773260 MS.gene37141:CDS 40.0%
!! GCTGATGGATTGTTTGTTGA+TGG - chr6.2:11773469-11773488 MS.gene37141:CDS 40.0%
!!! AAGGTGACAAAGTTTTGGCT+TGG - chr6.2:11774161-11774180 MS.gene37141:CDS 40.0%
!!! GAAGTGGAGTTTTGTTGAGA+AGG - chr6.2:11774444-11774463 MS.gene37141:CDS 40.0%
!!! TTGGTTTTGGTGCTGTTTCT+TGG - chr6.2:11775886-11775905 MS.gene37141:CDS 40.0%
ACAGATGAAACCGTGGTTGA+AGG - chr6.2:11775009-11775028 MS.gene37141:CDS 45.0%
AGCCGATATCGGTCTTTCAA+TGG - chr6.2:11775206-11775225 MS.gene37141:CDS 45.0%
AGTGTCAATGTCACAGCCAA+TGG + chr6.2:11773931-11773950 None:intergenic 45.0%
ATTAAGGATCCATGTCGTCC+AGG - chr6.2:11774740-11774759 MS.gene37141:CDS 45.0%
CAGTCGGTATGAACACAACA+TGG - chr6.2:11773623-11773642 MS.gene37141:CDS 45.0%
CATCTGTGTCCTCATTAGGT+TGG + chr6.2:11774996-11775015 None:intergenic 45.0%
CGGAATTCTCCAACCTAATG+AGG - chr6.2:11774984-11775003 MS.gene37141:CDS 45.0%
CTCCTGTTACAGCAACTACA+TGG + chr6.2:11775155-11775174 None:intergenic 45.0%
GAATATGCACCCTCTTCCAA+TGG + chr6.2:11774194-11774213 None:intergenic 45.0%
GCCGATATCGGTCTTTCAAT+GGG - chr6.2:11775207-11775226 MS.gene37141:CDS 45.0%
GCTACACTTTCACTTGGCTT+CGG - chr6.2:11773202-11773221 MS.gene37141:CDS 45.0%
GGAGTTGCACTGAATACAAC+TGG - chr6.2:11774251-11774270 MS.gene37141:CDS 45.0%
GTAGTTGCTGTAACAGGAGA+TGG - chr6.2:11775156-11775175 MS.gene37141:CDS 45.0%
GTCGGTATGAACACAACATG+GGG - chr6.2:11773625-11773644 MS.gene37141:CDS 45.0%
GTTAGGGCTTGTCGGTATTA+AGG - chr6.2:11774724-11774743 MS.gene37141:CDS 45.0%
GTTGCACTGAATACAACTGG+TGG - chr6.2:11774254-11774273 MS.gene37141:CDS 45.0%
TGCTCCTTTCCAATGTGCAA+TGG + chr6.2:11774486-11774505 None:intergenic 45.0%
TTAAGGATCCATGTCGTCCA+GGG - chr6.2:11774741-11774760 MS.gene37141:CDS 45.0%
! GTTGATGAATCGAGCATGAC+CGG - chr6.2:11773505-11773524 MS.gene37141:CDS 45.0%
! GTTGTTGTTGCAATCCCTGA+GGG - chr6.2:11773901-11773920 MS.gene37141:CDS 45.0%
! TGTTGTTGTTGCAATCCCTG+AGG - chr6.2:11773900-11773919 MS.gene37141:CDS 45.0%
!! AAAGAAGGTTGGTACGATGG+TGG - chr6.2:11773244-11773263 MS.gene37141:CDS 45.0%
!! AGAGGCTTTGTTCTACCAAC+TGG + chr6.2:11775534-11775553 None:intergenic 45.0%
AAAGTCGCAGACGAAGAGCT+TGG - chr6.2:11774653-11774672 MS.gene37141:intron 50.0%
AATCCCTGAGGGTTTGCCAT+TGG - chr6.2:11773912-11773931 MS.gene37141:CDS 50.0%
ACCACGGTGAAAGATGGAGT+AGG + chr6.2:11772890-11772909 None:intergenic 50.0%
ACCTACTCCATCTTTCACCG+TGG - chr6.2:11772886-11772905 MS.gene37141:CDS 50.0%
CACCCTCTTCCAATGGTTCT+AGG + chr6.2:11774187-11774206 None:intergenic 50.0%
CTCTACATGATCGCTCTCAC+CGG + chr6.2:11773527-11773546 None:intergenic 50.0%
GGCCATGTAGTTGCTGTAAC+AGG - chr6.2:11775150-11775169 MS.gene37141:CDS 50.0%
GGCCTAGAACCATTGGAAGA+GGG - chr6.2:11774182-11774201 MS.gene37141:CDS 50.0%
GGCTTCGGTATCAAGCAACA+TGG - chr6.2:11773217-11773236 MS.gene37141:CDS 50.0%
TAAGGATCCATGTCGTCCAG+GGG - chr6.2:11774742-11774761 MS.gene37141:CDS 50.0%
TCGGGGACAAAAGTTGTCGA+TGG - chr6.2:11773577-11773596 MS.gene37141:CDS 50.0%
TGACATTCACACCGGCATGT+TGG + chr6.2:11774790-11774809 None:intergenic 50.0%
TGAGGACACAGATGAAACCG+TGG - chr6.2:11775002-11775021 MS.gene37141:CDS 50.0%
TGGCCTAGAACCATTGGAAG+AGG - chr6.2:11774181-11774200 MS.gene37141:CDS 50.0%
TTGGAAAGGAGCAGCAGAGA+TGG - chr6.2:11774493-11774512 MS.gene37141:CDS 50.0%
!! GGTGCTGTTTCTTGGCCAAT+TGG - chr6.2:11775894-11775913 MS.gene37141:CDS 50.0%
!! TTGGCTTGGCCTAGAACCAT+TGG - chr6.2:11774175-11774194 MS.gene37141:CDS 50.0%
ACAGCCAATGGCAAACCCTC+AGG + chr6.2:11773919-11773938 None:intergenic 55.0%
CAGCCAATGGCAAACCCTCA+GGG + chr6.2:11773918-11773937 None:intergenic 55.0%
GCAGACGAAGAGCTTGGAGA+TGG - chr6.2:11774659-11774678 MS.gene37141:CDS 55.0%
GTGGAAGCTTGCCAACATGC+CGG - chr6.2:11774776-11774795 MS.gene37141:CDS 55.0%
TCGTCCAGGGGTGAAGAAAG+CGG - chr6.2:11774754-11774773 MS.gene37141:CDS 55.0%
TTCTTCACCCCTGGACGACA+TGG + chr6.2:11774752-11774771 None:intergenic 55.0%
! TACTTCACCGGCTGAAACCG+CGG + chr6.2:11775406-11775425 None:intergenic 55.0%
! TCGAAGTGGTCGTCGGCTAA+AGG - chr6.2:11773384-11773403 MS.gene37141:CDS 55.0%
!! GGTGATCAAGTACCGGCTGA+TGG - chr6.2:11773454-11773473 MS.gene37141:CDS 55.0%
TCCACCGCTTTCTTCACCCC+TGG + chr6.2:11774761-11774780 None:intergenic 60.0%
TCCAGGGGTGAAGAAAGCGG+TGG - chr6.2:11774757-11774776 MS.gene37141:CDS 60.0%
TTCGTAGCCGCGGTTTCAGC+CGG - chr6.2:11775396-11775415 MS.gene37141:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 11772725 11775986 11772725 ID=MS.gene37141
chr6.2 mRNA 11772725 11775986 11772725 ID=MS.gene37141.t1;Parent=MS.gene37141
chr6.2 exon 11774657 11775986 11774657 ID=MS.gene37141.t1.exon1;Parent=MS.gene37141.t1
chr6.2 CDS 11774657 11775986 11774657 ID=cds.MS.gene37141.t1;Parent=MS.gene37141.t1
chr6.2 exon 11773890 11774573 11773890 ID=MS.gene37141.t1.exon2;Parent=MS.gene37141.t1
chr6.2 CDS 11773890 11774573 11773890 ID=cds.MS.gene37141.t1;Parent=MS.gene37141.t1
chr6.2 exon 11772725 11773767 11772725 ID=MS.gene37141.t1.exon3;Parent=MS.gene37141.t1
chr6.2 CDS 11772725 11773767 11772725 ID=cds.MS.gene37141.t1;Parent=MS.gene37141.t1
Gene Sequence

>MS.gene37141

ATGTCAATGCCATTTTTCACAAACATGAACGACATTGAGACACTTCTCAATGCACCAAAAAACACCAATAACACACACAACAAAAGATGGCACAATGCATTCATGAAAATCTATTGTTCTAGGGCTTTCATGTTACATTTTACCAAGAAACAGAAAATCACACCTACTCCATCTTTCACCGTGGTTGATTTAAATCCACCACACTCTTTTACCATTGATCAAGAAACTCTCATAGATATTGTCAAAGAGAAAAACATTGACACACTTCAAAATCATGGTGGAGTTGAAGGTGTTGCTTCATCACTTAAAACCAACATTGAGCTTGGTATCAAAAGTGATGATCATGATTTTGGAGACATTGCAATTAGGAAAGAAGTGTTTGGTTCCAACAATTACAAAAAACCACCTTCTAAGAGTTTCATTCATTTTGTTATTGAAGCTTTTAAGGATGTAACAATTATAATCCTTTTGGTTTGTGCTACACTTTCACTTGGCTTCGGTATCAAGCAACATGGAATCAAAGAAGGTTGGTACGATGGTGGTAGCATTTTCCTAGCTGTTTTTATCGTAATTTCAATGTCATCAACAAGCAACTTCAAACAAAACAAACAATTTGATAAATTGTCTCAAGTTAGCAATGACATTCAAATTGATTTAGTTCGAAGTGGTCGTCGGCTAAAGGTATCAATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCGGCTGATGGATTGTTTGTTGATGGACATTCATTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGCGATCATGTAGAGATAAATCGAAATTTTCATCCTTTTTTGCTTTCGGGGACAAAAGTTGTCGATGGATATGCAAAAATGCTTGTTACATCAGTCGGTATGAACACAACATGGGGACAAATGATGAGTTCAATAAGCAATGACATCGACGAGGAAACACCTTTGCAAACAAGGTTAAATAAGCTAACATCATCGATCGGAAAAGTTGGTTTGGTTGTCGCGTTTTTAGTCCTTGTTGTCCTCTTGATTCGATATTTCACCGGGAACACAAAGAACGATAACGGAGTTAGAGAGTTCAATGGTAGAAAGACTAGTTTTGATGATGTGATGAATGCAATCATTGGAATTATTGCTGATGCTGTTACTATTGTTGTTGTTGCAATCCCTGAGGGTTTGCCATTGGCTGTGACATTGACACTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGAAAACTCTCTGCATGTGAAACTATGGGATCTGCTACTACTATTTGCACCGACAAAACAGGTACTATTGAAAAAAATTGATTCTTTAAAAGCTGTTTTCAAAAGTGATTATTTATACTGTTTCTGAAAAGTGATTTGTAATAGGTACACTCACTTTGAATCAGATGAAGGTGACAAAGTTTTGGCTTGGCCTAGAACCATTGGAAGAGGGTGCATATTCAAATGCTGATCCATCTGTTATTCAATTGATCAAAGAAGGAGTTGCACTGAATACAACTGGTGGTGTTCACAAATCGAAATTAGGTTCGGATTCTGAATTCGAGTTTTCAGGTAGTCCAACAGAAAAAGCAATACTATCTTGGGCTGTTTTGGAATTGAAAATGGATATGGAGCACTTAACAAAAAGTTGTTCTATTATTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAGAAGGAACGTCGACAACAAAACCATTGCACATTGGAAAGGAGCAGCAGAGATGGTTCTAAGAATGTGTTCTAGATACTATGATGGTTATGGAATTGTGAAAGATCTTGACAATGAATCTATGTTGAAATTCGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTAGCATATACAAAAGTCGCAGACGAAGAGCTTGGAGATGGAGACAATAACAAGATGGTGGTAAAAGACAATGATTTAACATTGTTAGGGCTTGTCGGTATTAAGGATCCATGTCGTCCAGGGGTGAAGAAAGCGGTGGAAGCTTGCCAACATGCCGGTGTGAATGTCAAAATGATTACAGGTATTACTAAAATATCTCATTTATTAGTAACTTGATCTTTCGATCGATATTGAATATAAAATCCTCTATTTATACATACGTGTCTATATCAAAATGATGCCGAACTCTATCTCTGATTATAGGTGACAATGTTTTCACTGCGAAAGCTATAGCATTTGAATGCGGAATTCTCCAACCTAATGAGGACACAGATGAAACCGTGGTTGAAGGCGAACAATTTCGCAACTTCACACCCGAAGAGAGATTAGAAAAAGTCGAAAAAATATCTGTGATGGCAAGATCTTCTCCATTTGACAAACTTCTAATGGTTCAATGTTTAAAACAAAAAGGCCATGTAGTTGCTGTAACAGGAGATGGAACAAATGATGCACCGGCATTGAAAGAAGCCGATATCGGTCTTTCAATGGGAATTCAAGGTACAGAAGTTGCAAAAGAGAGTTCAGATATTGTTATATTAGACGACAATTTTGCATCTATAGTAACAGTTTTAAACTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAACTAACAGTGAATGTGGCAGCACTTGTTATCAATTTCGTAGCCGCGGTTTCAGCCGGTGAAGTACCATTAACAGCAGTTCAATTATTATGGGTGAATTTGATTATGGATACATTAGGTGCATTGGCTCTTGCAACTGAAAAACCTACTAAGGAATTAATGGATAAAAAACCAGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTGTGTCACAAGCTTTGTACCAAATAGTAATATTGTTAACTCTTCAATTCAAAGGTGAGGATATTTTTGGTGTGACATCAAAGGTAAATGACACATTGATATTTAATACATTTGTTCTATGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTTTTTGAAGGGATTTTTAAGAGCAAGTTGTTTTTGGGAATTATTGGTGTGACATTGGTTCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTGGTACAGAAAGGTTGAATTGGAGAGAATGGATTATTTGTATTGGTTTTGGTGCTGTTTCTTGGCCAATTGGTTTTGTTGTTAAGTTGATTCCTGTCTCAGATAAACCATTTCTTGATTTTTTTAGTATGAAGAAGACTTAG
Protein sequence

>MS.gene37141.t1

MSMPFFTNMNDIETLLNAPKNTNNTHNKRWHNAFMKIYCSRAFMLHFTKKQKITPTPSFTVVDLNPPHSFTIDQETLIDIVKEKNIDTLQNHGGVEGVASSLKTNIELGIKSDDHDFGDIAIRKEVFGSNNYKKPPSKSFIHFVIEAFKDVTIIILLVCATLSLGFGIKQHGIKEGWYDGGSIFLAVFIVISMSSTSNFKQNKQFDKLSQVSNDIQIDLVRSGRRLKVSIFDIVVGDVVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEINRNFHPFLLSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLIRYFTGNTKNDNGVREFNGRKTSFDDVMNAIIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPLEEGAYSNADPSVIQLIKEGVALNTTGGVHKSKLGSDSEFEFSGSPTEKAILSWAVLELKMDMEHLTKSCSIIQVETFNSKKKRSGVLLRRNVDNKTIAHWKGAAEMVLRMCSRYYDGYGIVKDLDNESMLKFESIIQGMAASSLRCIALAYTKVADEELGDGDNNKMVVKDNDLTLLGLVGIKDPCRPGVKKAVEACQHAGVNVKMITGDNVFTAKAIAFECGILQPNEDTDETVVEGEQFRNFTPEERLEKVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVLNWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKKPVGRTKPLITNIMWRNLVSQALYQIVILLTLQFKGEDIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIIGVTLVLQVVMVEFLKKFAGTERLNWREWIICIGFGAVSWPIGFVVKLIPVSDKPFLDFFSMKKT