Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37431.t1 | XP_003603139.1 | 88.1 | 606 | 71 | 1 | 1 | 606 | 1 | 605 | 2.70E-214 | 755 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37431.t1 | Q96AE4 | 32.0 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 1.9e-22 | 109.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37431.t1 | G7J7L9 | 88.1 | 606 | 71 | 1 | 1 | 606 | 1 | 605 | 2.0e-214 | 755.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051122 | MS.gene37431 | -0.800405 | 1.46E-48 | -1.69E-46 |
| MS.gene052677 | MS.gene37431 | -0.801561 | 8.50E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene37431 | 0.811405 | 7.12E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene37431 | -0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene37431 | -0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene059952 | MS.gene37431 | -0.806405 | 8.36E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene37431 | -0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene37431 | -0.834535 | 2.83E-56 | -1.69E-46 |
| MS.gene060852 | MS.gene37431 | -0.833501 | 5.14E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013796 | MS.gene37431 | PPI |
| MS.gene37431 | MS.gene013791 | PPI |
| MS.gene02577 | MS.gene37431 | PPI |
| MS.gene73791 | MS.gene37431 | PPI |
| MS.gene37431 | MS.gene73790 | PPI |
| MS.gene46271 | MS.gene37431 | PPI |
| MS.gene37431 | MS.gene46269 | PPI |
| MS.gene37431 | MS.gene03206 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37431.t1 | MTR_3g104280 | 97.030 | 606 | 17 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1123 |
| MS.gene37431.t1 | MTR_3g104270 | 96.865 | 606 | 18 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1120 |
| MS.gene37431.t1 | MTR_1g016760 | 62.969 | 640 | 142 | 18 | 1 | 588 | 1 | 597 | 0.0 | 593 |
| MS.gene37431.t1 | MTR_5g008420 | 41.811 | 519 | 224 | 24 | 82 | 564 | 181 | 657 | 4.54e-70 | 241 |
| MS.gene37431.t1 | MTR_1g090773 | 29.187 | 209 | 117 | 6 | 89 | 283 | 39 | 230 | 1.89e-11 | 66.2 |
| MS.gene37431.t1 | MTR_7g010340 | 28.015 | 539 | 259 | 27 | 68 | 561 | 79 | 533 | 2.27e-11 | 67.0 |
| MS.gene37431.t1 | MTR_7g010340 | 28.015 | 539 | 259 | 27 | 68 | 561 | 95 | 549 | 2.37e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37431.t1 | AT2G25970 | 53.177 | 598 | 181 | 27 | 26 | 587 | 66 | 600 | 7.76e-129 | 392 |
| MS.gene37431.t1 | AT1G33680 | 35.979 | 567 | 247 | 28 | 86 | 600 | 232 | 734 | 6.82e-54 | 196 |
| MS.gene37431.t1 | AT4G10070 | 43.972 | 282 | 127 | 10 | 82 | 349 | 172 | 436 | 1.89e-53 | 194 |
| MS.gene37431.t1 | AT5G04430 | 30.769 | 208 | 124 | 7 | 89 | 289 | 38 | 232 | 5.58e-14 | 73.9 |
| MS.gene37431.t1 | AT5G04430 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 2.77e-12 | 68.6 |
Find 232 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAGGTTGGCCTTATAAT+TGG | 0.202642 | 3.4:-91380326 | MS.gene37431:intron |
| GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | 3.4:-91381617 | MS.gene37431:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.232400 | 3.4:+91378415 | None:intergenic |
| GACTAGGATGGTTGAACTTA+TGG | 0.236098 | 3.4:-91381504 | MS.gene37431:CDS |
| CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | 3.4:-91378987 | MS.gene37431:CDS |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.253746 | 3.4:+91378416 | None:intergenic |
| AGTGCAAATCCACCTGTTTA+TGG | 0.260187 | 3.4:-91378249 | MS.gene37431:CDS |
| CTCCTCCTTTACCAATTATA+AGG | 0.261517 | 3.4:+91380315 | None:intergenic |
| TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | 3.4:-91380510 | MS.gene37431:CDS |
| AGTTGGAAGCGTGCCCTTCT+TGG | 0.286199 | 3.4:+91378460 | None:intergenic |
| GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | 3.4:+91378388 | None:intergenic |
| ATTACTCCCACTGCCATAAC+TGG | 0.291727 | 3.4:+91378488 | None:intergenic |
| TTCTACCGGAGCACGAATTC+AGG | 0.305971 | 3.4:-91380270 | MS.gene37431:intron |
| AGACGGATGGTTGCACAATC+TGG | 0.309169 | 3.4:-91380477 | MS.gene37431:CDS |
| ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | 3.4:+91381515 | None:intergenic |
| CATCCCCACACCTTATTGTT+TGG | 0.311267 | 3.4:+91380429 | None:intergenic |
| CTTTCTGTTGATGTATCACC+TGG | 0.313635 | 3.4:+91380062 | None:intergenic |
| GAAGGGCACGCTTCCAACTA+TGG | 0.327467 | 3.4:-91378456 | MS.gene37431:CDS |
| TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | 3.4:+91378700 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.360383 | 3.4:-91378039 | MS.gene37431:CDS |
| GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | 3.4:+91381739 | None:intergenic |
| AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | 3.4:+91381811 | None:intergenic |
| GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | 3.4:-91380504 | MS.gene37431:CDS |
| TTTGCTGATTCAATTTGATC+AGG | 0.363459 | 3.4:+91380017 | None:intergenic |
| GATTCAAGTTACTCGTGATA+TGG | 0.369842 | 3.4:-91381546 | MS.gene37431:CDS |
| CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | 3.4:+91378330 | None:intergenic |
| TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | 3.4:-91380519 | MS.gene37431:intron |
| TTATGGTGCTGGTTATGTTC+AGG | 0.375380 | 3.4:-91378022 | MS.gene37431:CDS |
| GATGCAAATACCAAACAATA+AGG | 0.377129 | 3.4:-91380439 | MS.gene37431:intron |
| TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | 3.4:+91381740 | None:intergenic |
| GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | 3.4:+91381847 | None:intergenic |
| CCGGTGGATATTCCACCAAC+TGG | 0.387764 | 3.4:-91378785 | MS.gene37431:CDS |
| AATGCGCAACAACAACAATC+TGG | 0.391525 | 3.4:-91378561 | MS.gene37431:CDS |
| TGTTGCTGATCATATGTTTG+TGG | 0.391746 | 3.4:+91378528 | None:intergenic |
| GCTGAGCATACCCGGAAGGC+GGG | 0.392161 | 3.4:+91378163 | None:intergenic |
| GGTCCTTCACAGCCAGCTGA+TGG | 0.395783 | 3.4:-91378669 | MS.gene37431:CDS |
| GGCCAGACTCCGCCGTCATA+TGG | 0.396618 | 3.4:-91378054 | MS.gene37431:CDS |
| GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | 3.4:-91381611 | MS.gene37431:CDS |
| TGGAGCACCGTTATCGGACT+TGG | 0.399369 | 3.4:+91381730 | None:intergenic |
| CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | 3.4:-91378330 | MS.gene37431:CDS |
| CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | 3.4:-91378693 | MS.gene37431:CDS |
| TTCCATATGACGGCGGAGTC+TGG | 0.406065 | 3.4:+91378052 | None:intergenic |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3.4:-91378306 | MS.gene37431:CDS |
| GTTGGAAGCGTGCCCTTCTT+GGG | 0.411122 | 3.4:+91378461 | None:intergenic |
| TATGATCAGCAACAAGGTTA+TGG | 0.411167 | 3.4:-91378519 | MS.gene37431:CDS |
| CAAGGTGGCCAGCCTGGCTA+TGG | 0.413475 | 3.4:-91378075 | MS.gene37431:CDS |
| AATCCCGACCACCGTCTAGC+TGG | 0.415564 | 3.4:-91378932 | MS.gene37431:CDS |
| CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | 3.4:+91378331 | None:intergenic |
| ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | 3.4:-91381503 | MS.gene37431:CDS |
| AACTGCACAGGCTGTTCCAC+AGG | 0.420141 | 3.4:-91377974 | MS.gene37431:CDS |
| TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | 3.4:-91378501 | MS.gene37431:CDS |
| AGCCAACCAGGACAGGGTTA+TGG | 0.429254 | 3.4:-91378606 | MS.gene37431:CDS |
| CTGGTTGAGGAGTTCCTTGT+TGG | 0.431801 | 3.4:+91378367 | None:intergenic |
| GAAGCGTGCCCTTCTTGGGT+TGG | 0.433826 | 3.4:+91378465 | None:intergenic |
| TGGTTATAGCCAACCAGGAC+AGG | 0.437107 | 3.4:-91378613 | MS.gene37431:CDS |
| TAGTGGGTTGGGAAGTTTGG+GGG | 0.438776 | 3.4:+91378418 | None:intergenic |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3.4:+91378407 | None:intergenic |
| GCTTGTTGCACAGGAGCAGC+AGG | 0.441689 | 3.4:+91378903 | None:intergenic |
| GCTCCTCAAGGTGGCCAGCC+TGG | 0.443253 | 3.4:-91378081 | MS.gene37431:CDS |
| TCTTGACCATAACCCTGTCC+TGG | 0.444195 | 3.4:+91378600 | None:intergenic |
| CGATTGTGGAGCACCGTTAT+CGG | 0.444219 | 3.4:+91381724 | None:intergenic |
| GACGGATGGTTGCACAATCT+GGG | 0.446354 | 3.4:-91380476 | MS.gene37431:CDS |
| CGATAACGGTGCTCCACAAT+CGG | 0.446619 | 3.4:-91381723 | MS.gene37431:CDS |
| GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | 3.4:+91378322 | None:intergenic |
| AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | 3.4:+91378929 | None:intergenic |
| AGTGGGTTGGGAAGTTTGGG+GGG | 0.456628 | 3.4:+91378419 | None:intergenic |
| GTCCTTCACAGCCAGCTGAT+GGG | 0.456888 | 3.4:-91378668 | MS.gene37431:CDS |
| TGAGCATACCCGGAAGGCGG+GGG | 0.460955 | 3.4:+91378165 | None:intergenic |
| TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | 3.4:+91378323 | None:intergenic |
| AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | 3.4:+91378934 | None:intergenic |
| AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | 3.4:-91380009 | MS.gene37431:CDS |
| AAGTATCTTCAGATGCAATC+TGG | 0.464861 | 3.4:-91381575 | MS.gene37431:CDS |
| CCTGTGCAACAAGCTGGTTA+TGG | 0.465420 | 3.4:-91378894 | MS.gene37431:CDS |
| AGAACACCAACCCTACCATT+AGG | 0.466222 | 3.4:+91381623 | None:intergenic |
| TACAGTCAACCTCCTTCCTC+TGG | 0.467231 | 3.4:-91378633 | MS.gene37431:CDS |
| GATAACGGTGCTCCACAATC+GGG | 0.467332 | 3.4:-91381722 | MS.gene37431:CDS |
| GGAAATAGTTCTTATGGTGC+TGG | 0.472518 | 3.4:-91378033 | MS.gene37431:CDS |
| TTGCTGATTCAATTTGATCA+GGG | 0.472599 | 3.4:+91380018 | None:intergenic |
| TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | 3.4:-91381668 | MS.gene37431:CDS |
| AAGAAGATTGAAATACCTAA+TGG | 0.476293 | 3.4:-91381638 | MS.gene37431:CDS |
| GTTGGCCTTATAATTGGTAA+AGG | 0.477296 | 3.4:-91380320 | MS.gene37431:CDS |
| GGCGGAGTCTGGCCATAGCC+AGG | 0.479964 | 3.4:+91378063 | None:intergenic |
| GACCCATCAGCTGGCTGTGA+AGG | 0.481746 | 3.4:+91378666 | None:intergenic |
| GGTTATGGCTATGGGCAACC+TGG | 0.488138 | 3.4:-91378879 | MS.gene37431:CDS |
| GAGTCTGGCCATAGCCAGGC+TGG | 0.490778 | 3.4:+91378067 | None:intergenic |
| CAACAAGCTGGTTATGGCTA+TGG | 0.490845 | 3.4:-91378888 | MS.gene37431:CDS |
| CCATAACCAGCTTGTTGCAC+AGG | 0.496256 | 3.4:+91378894 | None:intergenic |
| GGCTGAGCATACCCGGAAGG+CGG | 0.497089 | 3.4:+91378162 | None:intergenic |
| CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | 3.4:-91380494 | MS.gene37431:CDS |
| GATGGACCAGAGTATGATCC+AGG | 0.501151 | 3.4:+91378861 | None:intergenic |
| CCAGTTGGTGGAATATCCAC+CGG | 0.501220 | 3.4:+91378785 | None:intergenic |
| TTCTGTTGATGTATCACCTG+GGG | 0.507849 | 3.4:+91380064 | None:intergenic |
| GTAGTGGGTTGGGAAGTTTG+GGG | 0.508308 | 3.4:+91378417 | None:intergenic |
| CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | 3.4:-91378692 | MS.gene37431:CDS |
| GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | 3.4:+91378389 | None:intergenic |
| GGTGAGATGGTGCAGTGGAT+TGG | 0.508922 | 3.4:+91378760 | None:intergenic |
| CCTAGCACAGCAGGAGGCTA+TGG | 0.510304 | 3.4:-91378213 | MS.gene37431:CDS |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3.4:-91378494 | MS.gene37431:CDS |
| GACTGTGATTGACCATAAAC+AGG | 0.513068 | 3.4:+91378237 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3.4:-91378312 | MS.gene37431:CDS |
| CCATAGCCTCCTGCTGTGCT+AGG | 0.513919 | 3.4:+91378213 | None:intergenic |
| TGCTGATTCAATTTGATCAG+GGG | 0.517465 | 3.4:+91380019 | None:intergenic |
| TAACTCTGGCTGAGCATACC+CGG | 0.518719 | 3.4:+91378155 | None:intergenic |
| GCTGCTCCTGTGCAACAAGC+TGG | 0.519086 | 3.4:-91378900 | MS.gene37431:CDS |
| CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | 3.4:+91381748 | None:intergenic |
| GAAATACCTAATGGTAGGGT+TGG | 0.520361 | 3.4:-91381629 | MS.gene37431:CDS |
| TCACAGTCACCTAGCACAGC+AGG | 0.521102 | 3.4:-91378222 | MS.gene37431:CDS |
| GCTCTCTGAGTGCCTAACTC+TGG | 0.522190 | 3.4:+91378141 | None:intergenic |
| TCAGCAGAAGAAACAGCGTC+AGG | 0.524572 | 3.4:+91381476 | None:intergenic |
| GACCATAACCCTGTCCTGGT+TGG | 0.526303 | 3.4:+91378604 | None:intergenic |
| ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | 3.4:+91378332 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3.4:+91378401 | None:intergenic |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3.4:-91378120 | MS.gene37431:CDS |
| ATCTGCTTGTGATCCATAGT+TGG | 0.529858 | 3.4:+91378443 | None:intergenic |
| AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | 3.4:+91381848 | None:intergenic |
| ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | 3.4:-91378931 | MS.gene37431:CDS |
| TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | 3.4:+91378798 | None:intergenic |
| GGGAGTAATCCAACCCAAGA+AGG | 0.532914 | 3.4:-91378474 | MS.gene37431:CDS |
| GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | 3.4:+91378928 | None:intergenic |
| GAGGGAGGAGCACCATAGCT+AGG | 0.535314 | 3.4:+91378282 | None:intergenic |
| GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | 3.4:-91381608 | MS.gene37431:CDS |
| GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | 3.4:-91380507 | MS.gene37431:CDS |
| AACAAGCTGGTTATGGCTAT+GGG | 0.538613 | 3.4:-91378887 | MS.gene37431:CDS |
| GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | 3.4:+91378921 | None:intergenic |
| CACCAGCAGTCTACTCATGC+AGG | 0.540059 | 3.4:-91378741 | MS.gene37431:CDS |
| TAAACAGGTGGATTTGCACT+TGG | 0.540765 | 3.4:+91378252 | None:intergenic |
| GGGTATGCTCAGCCAGAGTT+AGG | 0.541597 | 3.4:-91378153 | MS.gene37431:CDS |
| TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | 3.4:-91380518 | MS.gene37431:intron |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3.4:-91378495 | MS.gene37431:CDS |
| ATGCCTCAGCCACCATATGC+AGG | 0.544233 | 3.4:-91378825 | MS.gene37431:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3.4:+91378406 | None:intergenic |
| CTGAGCATACCCGGAAGGCG+GGG | 0.547333 | 3.4:+91378164 | None:intergenic |
| GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | 3.4:-91381785 | MS.gene37431:CDS |
| TTTCTGTTGATGTATCACCT+GGG | 0.548846 | 3.4:+91380063 | None:intergenic |
| CTGATCCTAATTCTCAGACT+AGG | 0.549418 | 3.4:-91381520 | MS.gene37431:CDS |
| TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | 3.4:+91378813 | None:intergenic |
| CAGAGAGCACCAGTGCAACC+AGG | 0.550434 | 3.4:-91378126 | MS.gene37431:CDS |
| TTGAGGAGTTCCTTGTTGGT+TGG | 0.551933 | 3.4:+91378371 | None:intergenic |
| AAGAGTATGCAAGCTTCTAC+CGG | 0.552343 | 3.4:-91380284 | MS.gene37431:CDS |
| TAGCGATGGAGCAACTGCAC+AGG | 0.553254 | 3.4:-91377986 | MS.gene37431:CDS |
| TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | 3.4:+91378822 | None:intergenic |
| ATGCGCAACAACAACAATCT+GGG | 0.554757 | 3.4:-91378560 | MS.gene37431:CDS |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3.4:+91378117 | None:intergenic |
| GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | 3.4:-91378804 | MS.gene37431:CDS |
| AGTGGATTGGTCCCAGTTGG+TGG | 0.555514 | 3.4:+91378773 | None:intergenic |
| AGATTGAAATACCTAATGGT+AGG | 0.556097 | 3.4:-91381634 | MS.gene37431:CDS |
| AAACGAACCAAGTCCGATAA+CGG | 0.556846 | 3.4:-91381737 | MS.gene37431:CDS |
| TAGCCAGGCTGGCCACCTTG+AGG | 0.557256 | 3.4:+91378078 | None:intergenic |
| TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | 3.4:-91379990 | MS.gene37431:CDS |
| TCCTCTGGTTATAGCCAACC+AGG | 0.559096 | 3.4:-91378618 | MS.gene37431:CDS |
| CAATCATACGGTGCTCCTCA+AGG | 0.564374 | 3.4:-91378093 | MS.gene37431:CDS |
| CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | 3.4:-91378978 | MS.gene37431:CDS |
| GAGAACCTGAATTCGTGCTC+CGG | 0.566604 | 3.4:+91380265 | None:intergenic |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3.4:+91377997 | None:intergenic |
| GCTACTGCATAACCTGGTTG+AGG | 0.568505 | 3.4:+91378354 | None:intergenic |
| TCTGGTTATGGACCTAGCTA+TGG | 0.569183 | 3.4:-91378294 | MS.gene37431:CDS |
| CTGTATGCAGACCCATCAGC+TGG | 0.570591 | 3.4:+91378657 | None:intergenic |
| TAAGAATCAAACCCCGATTG+TGG | 0.574402 | 3.4:+91381710 | None:intergenic |
| GGGTATGGTCCGCAATCATA+CGG | 0.574711 | 3.4:-91378105 | MS.gene37431:CDS |
| GGCCTTATAATTGGTAAAGG+AGG | 0.574874 | 3.4:-91380317 | MS.gene37431:CDS |
| GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | 3.4:+91381766 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3.4:+91378402 | None:intergenic |
| AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | 3.4:-91378986 | MS.gene37431:CDS |
| TGCAGTGGATTGGTCCCAGT+TGG | 0.578827 | 3.4:+91378770 | None:intergenic |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3.4:-91378000 | MS.gene37431:CDS |
| GGCATGTTATACTGCGGTGA+TGG | 0.581623 | 3.4:+91378843 | None:intergenic |
| GATTGAAATACCTAATGGTA+GGG | 0.585821 | 3.4:-91381633 | MS.gene37431:CDS |
| CGGTGGATATTCCACCAACT+GGG | 0.586403 | 3.4:-91378784 | MS.gene37431:CDS |
| TGTTGCACAGGAGCAGCAGG+AGG | 0.586770 | 3.4:+91378906 | None:intergenic |
| CAACAACAACAATCTGGGTA+TGG | 0.587718 | 3.4:-91378555 | MS.gene37431:CDS |
| GGGCAACCTGGATCATACTC+TGG | 0.588895 | 3.4:-91378867 | MS.gene37431:CDS |
| TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | 3.4:-91380490 | MS.gene37431:CDS |
| GAATATCCACCGGGTTGCTG+AGG | 0.591522 | 3.4:+91378795 | None:intergenic |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3.4:-91378402 | MS.gene37431:CDS |
| TTACTCCCACTGCCATAACT+GGG | 0.595665 | 3.4:+91378489 | None:intergenic |
| CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | 3.4:+91381755 | None:intergenic |
| ACGGATGGTTGCACAATCTG+GGG | 0.600123 | 3.4:-91380475 | MS.gene37431:CDS |
| CACCTGCATGAGTAGACTGC+TGG | 0.604282 | 3.4:+91378739 | None:intergenic |
| CAGTTGGTGGAATATCCACC+GGG | 0.607367 | 3.4:+91378786 | None:intergenic |
| TAAGAACTATTTCCATATGA+CGG | 0.608805 | 3.4:+91378042 | None:intergenic |
| TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | 3.4:-91381516 | MS.gene37431:CDS |
| TGAGTAGACTGCTGGTGAGA+TGG | 0.609532 | 3.4:+91378747 | None:intergenic |
| GGTTATAGCCAACCAGGACA+GGG | 0.609709 | 3.4:-91378612 | MS.gene37431:CDS |
| CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | 3.4:+91381677 | None:intergenic |
| GGAGTAATCCAACCCAAGAA+GGG | 0.613412 | 3.4:-91378473 | MS.gene37431:CDS |
| CATCAATGAAGTCCTTGCTG+AGG | 0.616712 | 3.4:-91381447 | MS.gene37431:intron |
| TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | 3.4:+91381758 | None:intergenic |
| GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | 3.4:+91378924 | None:intergenic |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3.4:+91378314 | None:intergenic |
| TAATCAAATCCTCACTGGTG+AGG | 0.625790 | 3.4:-91379985 | MS.gene37431:intron |
| CAACAAGGAACTCCTCAACC+AGG | 0.626608 | 3.4:-91378366 | MS.gene37431:CDS |
| TCTGTTGATGTATCACCTGG+GGG | 0.627155 | 3.4:+91380065 | None:intergenic |
| GGTTATGGTCAAGAAAGCTA+TGG | 0.629248 | 3.4:-91378591 | MS.gene37431:CDS |
| ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | 3.4:+91378326 | None:intergenic |
| TATGATTGCGGACCATACCC+TGG | 0.630591 | 3.4:+91378108 | None:intergenic |
| TCCTGGTTGGCTATAACCAG+AGG | 0.630777 | 3.4:+91378617 | None:intergenic |
| GGAGGATAGCCTGCATATGG+TGG | 0.632205 | 3.4:+91378816 | None:intergenic |
| GTAGGGGCTACTGCATAACC+TGG | 0.633003 | 3.4:+91378348 | None:intergenic |
| GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | 3.4:+91381841 | None:intergenic |
| GGCTATGCTACCAACCAACA+AGG | 0.638622 | 3.4:-91378381 | MS.gene37431:CDS |
| TGAGGAGCACCGTATGATTG+CGG | 0.639312 | 3.4:+91378096 | None:intergenic |
| CAAACATATGATCAGCAACA+AGG | 0.642194 | 3.4:-91378525 | MS.gene37431:CDS |
| TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | 3.4:-91380517 | MS.gene37431:intron |
| TCAGGTGGCTATACTCAGCA+AGG | 0.643161 | 3.4:-91378960 | MS.gene37431:CDS |
| CGATGAACAACCCACCGCCA+CGG | 0.645490 | 3.4:-91381858 | MS.gene37431:CDS |
| AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | 3.4:-91381680 | MS.gene37431:CDS |
| AGAGAGCACCAGTGCAACCA+GGG | 0.650050 | 3.4:-91378125 | MS.gene37431:CDS |
| ACTGCACAGGCTGTTCCACA+GGG | 0.651647 | 3.4:-91377973 | MS.gene37431:CDS |
| GGTTGGCTATAACCAGAGGA+AGG | 0.652858 | 3.4:+91378621 | None:intergenic |
| TGGCTATAACCAGAGGAAGG+AGG | 0.658440 | 3.4:+91378624 | None:intergenic |
| AGAAATTCAGGGAACTCAGG+TGG | 0.658761 | 3.4:-91378975 | MS.gene37431:CDS |
| TCTGGCTGAGCATACCCGGA+AGG | 0.665619 | 3.4:+91378159 | None:intergenic |
| CGGATGGTTGCACAATCTGG+GGG | 0.666739 | 3.4:-91380474 | MS.gene37431:CDS |
| CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | 3.4:-91378691 | MS.gene37431:CDS |
| CAGTCACCTAGCACAGCAGG+AGG | 0.674325 | 3.4:-91378219 | MS.gene37431:CDS |
| TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | 3.4:+91381844 | None:intergenic |
| CAGCAGTCTACTCATGCAGG+TGG | 0.682332 | 3.4:-91378738 | MS.gene37431:CDS |
| CTGCTGGTGAGATGGTGCAG+TGG | 0.682356 | 3.4:+91378755 | None:intergenic |
| ATAACGGTGCTCCACAATCG+GGG | 0.686584 | 3.4:-91381721 | MS.gene37431:CDS |
| ACTTTAGCAACACCGCCCTG+TGG | 0.690074 | 3.4:+91377958 | None:intergenic |
| CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | 3.4:-91381677 | MS.gene37431:CDS |
| TGTGATTGACCATAAACAGG+TGG | 0.715400 | 3.4:+91378240 | None:intergenic |
| TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | 3.4:-91378801 | MS.gene37431:CDS |
| CTAGGTCCATAACCAGACTG+TGG | 0.724556 | 3.4:+91378300 | None:intergenic |
| GCACAGGCTGTTCCACAGGG+CGG | 0.725045 | 3.4:-91377970 | MS.gene37431:CDS |
| GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | 3.4:+91381787 | None:intergenic |
| GAACTATTTCCATATGACGG+CGG | 0.728848 | 3.4:+91378045 | None:intergenic |
| AGTAGCCCCTACCTCCCAAG+CGG | 0.730653 | 3.4:-91378337 | MS.gene37431:CDS |
| CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | 3.4:-91378690 | MS.gene37431:CDS |
| TCATACGGTGCTCCTCAAGG+TGG | 0.736772 | 3.4:-91378090 | MS.gene37431:CDS |
| GGCTGAGGCATGTTATACTG+CGG | 0.750903 | 3.4:+91378837 | None:intergenic |
| GATAACATACCTCACCAGTG+AGG | 0.751081 | 3.4:+91379976 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATGACTAATTTTTAT+TGG | - | chr3.4:91380700-91380719 | MS.gene37431:intron | 10.0% |
| !!! | CTTTTTTAAGTTTAAAATTA+TGG | - | chr3.4:91379942-91379961 | MS.gene37431:intron | 10.0% |
| !!! | TTTTAAACTTAAAAAAGATT+TGG | + | chr3.4:91379939-91379958 | None:intergenic | 10.0% |
| !! | AAATTCACTTTCAATTATAA+TGG | - | chr3.4:91380481-91380500 | MS.gene37431:CDS | 15.0% |
| !!! | AAAAGGTCAATAATTTTATA+AGG | + | chr3.4:91380024-91380043 | None:intergenic | 15.0% |
| !!! | AAAATGAATAACAATTTTGT+AGG | + | chr3.4:91380057-91380076 | None:intergenic | 15.0% |
| !!! | TTTTTTTATACTCTTGTTTA+CGG | - | chr3.4:91378421-91378440 | MS.gene37431:CDS | 15.0% |
| !! | AAAGAACATTAAAAATCGAT+GGG | - | chr3.4:91379798-91379817 | MS.gene37431:intron | 20.0% |
| !! | ATTGAAAGTGAATTTAACAT+AGG | + | chr3.4:91380476-91380495 | None:intergenic | 20.0% |
| !! | TAATCAATGATATTTCACTA+AGG | + | chr3.4:91378616-91378635 | None:intergenic | 20.0% |
| !! | TATATTATAGTTACAGAATC+AGG | + | chr3.4:91379217-91379236 | None:intergenic | 20.0% |
| !! | TTTAATCGTAAAACTAAACA+TGG | + | chr3.4:91379976-91379995 | None:intergenic | 20.0% |
| !!! | ACACATTTTTTTGTTTTATC+TGG | - | chr3.4:91379889-91379908 | MS.gene37431:intron | 20.0% |
| !!! | CTAATATCATCAATTTTTTC+AGG | - | chr3.4:91379736-91379755 | MS.gene37431:intron | 20.0% |
| !!! | CTTCGTATATTTTTATGTTT+TGG | - | chr3.4:91380781-91380800 | MS.gene37431:intron | 20.0% |
| !!! | TGAAATACATTTTTACTAAC+AGG | + | chr3.4:91379109-91379128 | None:intergenic | 20.0% |
| !!! | TTAAAGTATTTCTTATCGTT+GGG | - | chr3.4:91380374-91380393 | MS.gene37431:intron | 20.0% |
| !!! | TTTTATTTCATAGTTTGTTG+AGG | - | chr3.4:91380528-91380547 | MS.gene37431:intron | 20.0% |
| ! | AAGAAGATTGAAATACCTAA+TGG | - | chr3.4:91378203-91378222 | MS.gene37431:CDS | 25.0% |
| ! | GAAAGAACATTAAAAATCGA+TGG | - | chr3.4:91379797-91379816 | MS.gene37431:intron | 25.0% |
| ! | GTGATTTCAAAACATGAATT+GGG | + | chr3.4:91378582-91378601 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAAACCTCAGCA+AGG | + | chr3.4:91378409-91378428 | None:intergenic | 25.0% |
| ! | TAAAATTAGACAACACTTTG+AGG | - | chr3.4:91380242-91380261 | MS.gene37431:intron | 25.0% |
| ! | TAAATATGCTCAAATGATGT+TGG | - | chr3.4:91379251-91379270 | MS.gene37431:intron | 25.0% |
| ! | TAAGAACTATTTCCATATGA+CGG | + | chr3.4:91381802-91381821 | None:intergenic | 25.0% |
| ! | TACTCAAATGATGTTCAAAT+TGG | - | chr3.4:91378727-91378746 | MS.gene37431:CDS | 25.0% |
| ! | TCAACAAGTCAAAATTCAAA+AGG | + | chr3.4:91380206-91380225 | None:intergenic | 25.0% |
| ! | TCATATGGAAATAGTTCTTA+TGG | - | chr3.4:91381802-91381821 | MS.gene37431:CDS | 25.0% |
| !! | CTAATTTTTATTGGCATCAA+CGG | - | chr3.4:91380709-91380728 | MS.gene37431:intron | 25.0% |
| !! | CTTAAAGTATTTCTTATCGT+TGG | - | chr3.4:91380373-91380392 | MS.gene37431:intron | 25.0% |
| !! | TAATTTTTATTGGCATCAAC+GGG | - | chr3.4:91380710-91380729 | MS.gene37431:intron | 25.0% |
| !!! | ATACGTGTTGTTTATTAACT+AGG | - | chr3.4:91379312-91379331 | MS.gene37431:intron | 25.0% |
| !!! | ATTTTTATGTTTTGGTACGT+TGG | - | chr3.4:91380789-91380808 | MS.gene37431:intron | 25.0% |
| !!! | CAAAGTGTTGTCTAATTTTA+TGG | + | chr3.4:91380242-91380261 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTATTCTCGTTT+GGG | - | chr3.4:91379469-91379488 | MS.gene37431:intron | 25.0% |
| !!! | TTTATCTGGCTTATCATTTT+TGG | - | chr3.4:91379903-91379922 | MS.gene37431:intron | 25.0% |
| !!! | TTTTTATGTTTTGGTACGTT+GGG | - | chr3.4:91380790-91380809 | MS.gene37431:intron | 25.0% |
| AAATACCAAACAATAAGGTG+TGG | - | chr3.4:91379407-91379426 | MS.gene37431:intron | 30.0% | |
| AATACCAAACAATAAGGTGT+GGG | - | chr3.4:91379408-91379427 | MS.gene37431:intron | 30.0% | |
| AATAGATGTACACACAAAAC+GGG | + | chr3.4:91380760-91380779 | None:intergenic | 30.0% | |
| AATCGACAGAAATACACAAA+TGG | + | chr3.4:91380336-91380355 | None:intergenic | 30.0% | |
| AATTGAATCAGCAAAGCAAT+TGG | - | chr3.4:91379832-91379851 | MS.gene37431:intron | 30.0% | |
| ACTGTAATTCTTACTAGTCA+GGG | - | chr3.4:91378477-91378496 | MS.gene37431:CDS | 30.0% | |
| AGAATTGTTTCAACGTACTT+GGG | - | chr3.4:91380585-91380604 | MS.gene37431:intron | 30.0% | |
| AGATTGAAATACCTAATGGT+AGG | - | chr3.4:91378207-91378226 | MS.gene37431:CDS | 30.0% | |
| ATTGTCTCTATTTATGTTCC+TGG | - | chr3.4:91380275-91380294 | MS.gene37431:CDS | 30.0% | |
| CAATAGATGTACACACAAAA+CGG | + | chr3.4:91380761-91380780 | None:intergenic | 30.0% | |
| CTCAAATGATGTTTCAATGA+CGG | - | chr3.4:91378825-91378844 | MS.gene37431:CDS | 30.0% | |
| GATGCAAATACCAAACAATA+AGG | - | chr3.4:91379402-91379421 | MS.gene37431:intron | 30.0% | |
| GATTGAAATACCTAATGGTA+GGG | - | chr3.4:91378208-91378227 | MS.gene37431:CDS | 30.0% | |
| GGTGATTTCAAAACATGAAT+TGG | + | chr3.4:91378583-91378602 | None:intergenic | 30.0% | |
| TACTGTAATTCTTACTAGTC+AGG | - | chr3.4:91378476-91378495 | MS.gene37431:CDS | 30.0% | |
| TCATATGCTCAACTTTCATT+TGG | - | chr3.4:91380397-91380416 | MS.gene37431:intron | 30.0% | |
| TCTAATCTTGCACAATTTCA+TGG | - | chr3.4:91378943-91378962 | MS.gene37431:CDS | 30.0% | |
| TGAGTTATCATGGTTTCATT+TGG | + | chr3.4:91380143-91380162 | None:intergenic | 30.0% | |
| TTACTCACTAGAGCAAATAT+GGG | + | chr3.4:91380649-91380668 | None:intergenic | 30.0% | |
| TTGATAAATCATAGCTACTG+CGG | + | chr3.4:91380175-91380194 | None:intergenic | 30.0% | |
| TTGGTGAAACATTCACTAAT+AGG | - | chr3.4:91378998-91379017 | MS.gene37431:intron | 30.0% | |
| TTGTAGGAACTAAACTCAAA+AGG | + | chr3.4:91380041-91380060 | None:intergenic | 30.0% | |
| TTTACTCACTAGAGCAAATA+TGG | + | chr3.4:91380650-91380669 | None:intergenic | 30.0% | |
| TTTCACTAAGGTAACAGTTA+CGG | + | chr3.4:91378604-91378623 | None:intergenic | 30.0% | |
| ! | CTGATTTGATAACTGTTGTA+TGG | - | chr3.4:91378649-91378668 | MS.gene37431:CDS | 30.0% |
| !! | TTGCTGATTCAATTTGATCA+GGG | + | chr3.4:91379826-91379845 | None:intergenic | 30.0% |
| !! | TTTGCTGATTCAATTTGATC+AGG | + | chr3.4:91379827-91379846 | None:intergenic | 30.0% |
| !!! | ATTTGGCATAGTTTTATCCT+TGG | - | chr3.4:91380414-91380433 | MS.gene37431:intron | 30.0% |
| !!! | CTAGTTCGCTTTTTAATTTG+TGG | - | chr3.4:91380813-91380832 | MS.gene37431:intron | 30.0% |
| !!! | GAGCACCTTATTTTTACAAA+AGG | + | chr3.4:91380090-91380109 | None:intergenic | 30.0% |
| !!! | GTGTTTTGTTTATTCTCGTT+TGG | - | chr3.4:91379468-91379487 | MS.gene37431:intron | 30.0% |
| !!! | TTTGGCATAGTTTTATCCTT+GGG | - | chr3.4:91380415-91380434 | MS.gene37431:intron | 30.0% |
| AAAACACCTCTTATCAGTGA+TGG | + | chr3.4:91379192-91379211 | None:intergenic | 35.0% | |
| AAGTATCTTCAGATGCAATC+TGG | - | chr3.4:91378266-91378285 | MS.gene37431:CDS | 35.0% | |
| AATATGAAATCCATGTCGTC+GGG | + | chr3.4:91379701-91379720 | None:intergenic | 35.0% | |
| ACTAGGATGGTTGAACTTAT+GGG | - | chr3.4:91378338-91378357 | MS.gene37431:CDS | 35.0% | |
| AGAATCGTCTCAGAAATTCA+GGG | - | chr3.4:91380855-91380874 | MS.gene37431:intron | 35.0% | |
| ATACCAAACAATAAGGTGTG+GGG | - | chr3.4:91379409-91379428 | MS.gene37431:intron | 35.0% | |
| ATGACTGTAACTTTACCTCT+TGG | - | chr3.4:91378979-91378998 | MS.gene37431:CDS | 35.0% | |
| CAAACATATGATCAGCAACA+AGG | - | chr3.4:91381316-91381335 | MS.gene37431:intron | 35.0% | |
| CAGTCAGATACAACAAAATC+AGG | + | chr3.4:91378764-91378783 | None:intergenic | 35.0% | |
| CTCCTCCTTTACCAATTATA+AGG | + | chr3.4:91379529-91379548 | None:intergenic | 35.0% | |
| CTGTTGTATGGAGTTTCAAT+AGG | - | chr3.4:91378661-91378680 | MS.gene37431:CDS | 35.0% | |
| GAAACCATGATAACTCAAAC+TGG | - | chr3.4:91380146-91380165 | MS.gene37431:intron | 35.0% | |
| GAATATGAAATCCATGTCGT+CGG | + | chr3.4:91379702-91379721 | None:intergenic | 35.0% | |
| GAATTGTTTCAACGTACTTG+GGG | - | chr3.4:91380586-91380605 | MS.gene37431:intron | 35.0% | |
| GAGAATTGTTTCAACGTACT+TGG | - | chr3.4:91380584-91380603 | MS.gene37431:intron | 35.0% | |
| GATGAAATATATCCAGTTGC+AGG | - | chr3.4:91379431-91379450 | MS.gene37431:intron | 35.0% | |
| GGTTTCTTGTGTACATCTTT+AGG | - | chr3.4:91379499-91379518 | MS.gene37431:intron | 35.0% | |
| TATGATCAGCAACAAGGTTA+TGG | - | chr3.4:91381322-91381341 | MS.gene37431:intron | 35.0% | |
| TCAAACAAAATCTAACAGCC+AGG | + | chr3.4:91380296-91380315 | None:intergenic | 35.0% | |
| TCTTGTGTACATCTTTAGGT+TGG | - | chr3.4:91379503-91379522 | MS.gene37431:intron | 35.0% | |
| TGATGTACGGTCTGTATAAT+TGG | - | chr3.4:91380614-91380633 | MS.gene37431:intron | 35.0% | |
| TGATGTTTCAATGACGGTAA+AGG | - | chr3.4:91378831-91378850 | MS.gene37431:CDS | 35.0% | |
| TGCTCAAATGATGTTGGAAT+TGG | - | chr3.4:91379257-91379276 | MS.gene37431:intron | 35.0% | |
| TGTTGCTGATCATATGTTTG+TGG | + | chr3.4:91381316-91381335 | None:intergenic | 35.0% | |
| TTAGTGAATGTTTCACCAAG+AGG | + | chr3.4:91378997-91379016 | None:intergenic | 35.0% | |
| TTATTAACTAGGCTGAAGCT+GGG | - | chr3.4:91379323-91379342 | MS.gene37431:intron | 35.0% | |
| TTGGTTAATCAAATCCTCAC+TGG | - | chr3.4:91379851-91379870 | MS.gene37431:intron | 35.0% | |
| TTTATTAACTAGGCTGAAGC+TGG | - | chr3.4:91379322-91379341 | MS.gene37431:intron | 35.0% | |
| TTTCTGTTGATGTATCACCT+GGG | + | chr3.4:91379781-91379800 | None:intergenic | 35.0% | |
| ! | CTGCGCCTTTTGTAAAAATA+AGG | - | chr3.4:91380082-91380101 | MS.gene37431:CDS | 35.0% |
| ! | GATTCAAGTTACTCGTGATA+TGG | - | chr3.4:91378295-91378314 | MS.gene37431:CDS | 35.0% |
| ! | GTTGGTGTTCTTATTGGTAA+AGG | - | chr3.4:91378230-91378249 | MS.gene37431:CDS | 35.0% |
| ! | TTCATCGTACTTGCGTTTTA+GGG | + | chr3.4:91377970-91377989 | None:intergenic | 35.0% |
| !! | ATCTGGCTTATCATTTTTGG+AGG | - | chr3.4:91379906-91379925 | MS.gene37431:intron | 35.0% |
| !! | CTTTAGGTTGGCCTTATAAT+TGG | - | chr3.4:91379515-91379534 | MS.gene37431:intron | 35.0% |
| !! | GTGCTCATATTTTTACAGTG+TGG | - | chr3.4:91380104-91380123 | MS.gene37431:intron | 35.0% |
| !! | GTTGGCCTTATAATTGGTAA+AGG | - | chr3.4:91379521-91379540 | MS.gene37431:intron | 35.0% |
| !! | TCTGGCTTATCATTTTTGGA+GGG | - | chr3.4:91379907-91379926 | MS.gene37431:intron | 35.0% |
| !! | TGCTGATTCAATTTGATCAG+GGG | + | chr3.4:91379825-91379844 | None:intergenic | 35.0% |
| AAACGAACCAAGTCCGATAA+CGG | - | chr3.4:91378104-91378123 | MS.gene37431:CDS | 40.0% | |
| AACAAGCTGGTTATGGCTAT+GGG | - | chr3.4:91380954-91380973 | MS.gene37431:intron | 40.0% | |
| AACTTCTTGAGCTCGTTGTT+TGG | + | chr3.4:91378033-91378052 | None:intergenic | 40.0% | |
| AATGCGCAACAACAACAATC+TGG | - | chr3.4:91381280-91381299 | MS.gene37431:intron | 40.0% | |
| ACCATCCTAGTCTGAGAATT+AGG | + | chr3.4:91378329-91378348 | None:intergenic | 40.0% | |
| AGTGCAAATCCACCTGTTTA+TGG | - | chr3.4:91381592-91381611 | MS.gene37431:CDS | 40.0% | |
| ATCTGCTTGTGATCCATAGT+TGG | + | chr3.4:91381401-91381420 | None:intergenic | 40.0% | |
| ATGCGCAACAACAACAATCT+GGG | - | chr3.4:91381281-91381300 | MS.gene37431:intron | 40.0% | |
| CAACAACAACAATCTGGGTA+TGG | - | chr3.4:91381286-91381305 | MS.gene37431:intron | 40.0% | |
| CAGAATCGTCTCAGAAATTC+AGG | - | chr3.4:91380854-91380873 | MS.gene37431:intron | 40.0% | |
| CTGATCCTAATTCTCAGACT+AGG | - | chr3.4:91378321-91378340 | MS.gene37431:CDS | 40.0% | |
| CTTTCTGTTGATGTATCACC+TGG | + | chr3.4:91379782-91379801 | None:intergenic | 40.0% | |
| GAAATACCTAATGGTAGGGT+TGG | - | chr3.4:91378212-91378231 | MS.gene37431:CDS | 40.0% | |
| GAACTATTTCCATATGACGG+CGG | + | chr3.4:91381799-91381818 | None:intergenic | 40.0% | |
| GACTAGGATGGTTGAACTTA+TGG | - | chr3.4:91378337-91378356 | MS.gene37431:CDS | 40.0% | |
| GACTGTGATTGACCATAAAC+AGG | + | chr3.4:91381607-91381626 | None:intergenic | 40.0% | |
| GGAAATAGTTCTTATGGTGC+TGG | - | chr3.4:91381808-91381827 | MS.gene37431:CDS | 40.0% | |
| GGTGTTCTTATTGGTAAAGG+AGG | - | chr3.4:91378233-91378252 | MS.gene37431:CDS | 40.0% | |
| GGTTATGGTCAAGAAAGCTA+TGG | - | chr3.4:91381250-91381269 | MS.gene37431:intron | 40.0% | |
| TAAGAATCAAACCCCGATTG+TGG | + | chr3.4:91378134-91378153 | None:intergenic | 40.0% | |
| TAATCAAATCCTCACTGGTG+AGG | - | chr3.4:91379856-91379875 | MS.gene37431:intron | 40.0% | |
| TATTAACTAGGCTGAAGCTG+GGG | - | chr3.4:91379324-91379343 | MS.gene37431:intron | 40.0% | |
| TCCTAATTCTCAGACTAGGA+TGG | - | chr3.4:91378325-91378344 | MS.gene37431:CDS | 40.0% | |
| TGTGATTGACCATAAACAGG+TGG | + | chr3.4:91381604-91381623 | None:intergenic | 40.0% | |
| TTCTGTTGATGTATCACCTG+GGG | + | chr3.4:91379780-91379799 | None:intergenic | 40.0% | |
| ! | AAGAGTATGCAAGCTTCTAC+CGG | - | chr3.4:91379557-91379576 | MS.gene37431:intron | 40.0% |
| ! | GGCCTTATAATTGGTAAAGG+AGG | - | chr3.4:91379524-91379543 | MS.gene37431:intron | 40.0% |
| ! | GTCTCCAGTTTGAGTTATCA+TGG | + | chr3.4:91380153-91380172 | None:intergenic | 40.0% |
| ! | GTTCATCGTACTTGCGTTTT+AGG | + | chr3.4:91377971-91377990 | None:intergenic | 40.0% |
| ! | TAAACAGGTGGATTTGCACT+TGG | + | chr3.4:91381592-91381611 | None:intergenic | 40.0% |
| ! | TTATCGGACTTGGTTCGTTT+GGG | + | chr3.4:91378104-91378123 | None:intergenic | 40.0% |
| !! | ATTTGCACTTGGCTTTTGAG+AGG | + | chr3.4:91381581-91381600 | None:intergenic | 40.0% |
| !! | TATTCTCGTTTGGGTTGATG+TGG | - | chr3.4:91379478-91379497 | MS.gene37431:intron | 40.0% |
| !! | TTATGGTGCTGGTTATGTTC+AGG | - | chr3.4:91381819-91381838 | MS.gene37431:CDS | 40.0% |
| !! | TTTGCACTTGGCTTTTGAGA+GGG | + | chr3.4:91381580-91381599 | None:intergenic | 40.0% |
| ACTTGGGGCTTAGTGATGTA+CGG | - | chr3.4:91380601-91380620 | MS.gene37431:intron | 45.0% | |
| AGAAATTCAGGGAACTCAGG+TGG | - | chr3.4:91380866-91380885 | MS.gene37431:intron | 45.0% | |
| AGAACACCAACCCTACCATT+AGG | + | chr3.4:91378221-91378240 | None:intergenic | 45.0% | |
| AGTCAACCACAGTCTGGTTA+TGG | - | chr3.4:91381535-91381554 | MS.gene37431:CDS | 45.0% | |
| ATTACTCCCACTGCCATAAC+TGG | + | chr3.4:91381356-91381375 | None:intergenic | 45.0% | |
| CAACAAGCTGGTTATGGCTA+TGG | - | chr3.4:91380953-91380972 | MS.gene37431:intron | 45.0% | |
| CATCAATGAAGTCCTTGCTG+AGG | - | chr3.4:91378394-91378413 | MS.gene37431:CDS | 45.0% | |
| CATCCCCACACCTTATTGTT+TGG | + | chr3.4:91379415-91379434 | None:intergenic | 45.0% | |
| CCAAAAAACATGCCTGCAAC+TGG | + | chr3.4:91379446-91379465 | None:intergenic | 45.0% | |
| CTCAGAAATTCAGGGAACTC+AGG | - | chr3.4:91380863-91380882 | MS.gene37431:intron | 45.0% | |
| GATAACATACCTCACCAGTG+AGG | + | chr3.4:91379868-91379887 | None:intergenic | 45.0% | |
| GGAGTAATCCAACCCAAGAA+GGG | - | chr3.4:91381368-91381387 | MS.gene37431:intron | 45.0% | |
| GTGCAACCATCACTGATAAG+AGG | - | chr3.4:91379183-91379202 | MS.gene37431:intron | 45.0% | |
| TATGGAAGTCAACCACAGTC+TGG | - | chr3.4:91381529-91381548 | MS.gene37431:CDS | 45.0% | |
| TATTGGCATCAACGGGAATG+AGG | - | chr3.4:91380717-91380736 | MS.gene37431:intron | 45.0% | |
| TCTGGTTATGGACCTAGCTA+TGG | - | chr3.4:91381547-91381566 | MS.gene37431:CDS | 45.0% | |
| TCTGTTGATGTATCACCTGG+GGG | + | chr3.4:91379779-91379798 | None:intergenic | 45.0% | |
| TGAGGCTGACCTGTTAGATT+GGG | - | chr3.4:91380546-91380565 | MS.gene37431:intron | 45.0% | |
| TTACTCCCACTGCCATAACT+GGG | + | chr3.4:91381355-91381374 | None:intergenic | 45.0% | |
| TTCCCTCAACCCAATCTAAC+AGG | + | chr3.4:91380558-91380577 | None:intergenic | 45.0% | |
| TTGAGGAGTTCCTTGTTGGT+TGG | + | chr3.4:91381473-91381492 | None:intergenic | 45.0% | |
| TTGAGGCTGACCTGTTAGAT+TGG | - | chr3.4:91380545-91380564 | MS.gene37431:intron | 45.0% | |
| ! | AGACTGTGGTTGACTTCCAT+AGG | + | chr3.4:91381530-91381549 | None:intergenic | 45.0% |
| ! | GTTATCGGACTTGGTTCGTT+TGG | + | chr3.4:91378105-91378124 | None:intergenic | 45.0% |
| ! | TGACCTGTTAGATTGGGTTG+AGG | - | chr3.4:91380552-91380571 | MS.gene37431:intron | 45.0% |
| !! | AGTAGTGGGTTGGGAAGTTT+GGG | + | chr3.4:91381428-91381447 | None:intergenic | 45.0% |
| !! | GACCTGTTAGATTGGGTTGA+GGG | - | chr3.4:91380553-91380572 | MS.gene37431:intron | 45.0% |
| !! | GGTAGGGTTGGTGTTCTTAT+TGG | - | chr3.4:91378224-91378243 | MS.gene37431:CDS | 45.0% |
| !! | TGTTAGATTGGGTTGAGGGA+AGG | - | chr3.4:91380557-91380576 | MS.gene37431:intron | 45.0% |
| !!! | CCAGTTGCAGGCATGTTTTT+TGG | - | chr3.4:91379443-91379462 | MS.gene37431:intron | 45.0% |
| !!! | TTTTTTAAGTTTAAAATTAT+GGG | - | chr3.4:91379943-91379962 | MS.gene37431:intron | 5.0% |
| ACGGATGGTTGCACAATCTG+GGG | - | chr3.4:91379366-91379385 | MS.gene37431:intron | 50.0% | |
| AGACGGATGGTTGCACAATC+TGG | - | chr3.4:91379364-91379383 | MS.gene37431:intron | 50.0% | |
| ATAACGGTGCTCCACAATCG+GGG | - | chr3.4:91378120-91378139 | MS.gene37431:CDS | 50.0% | |
| CAACAAGGAACTCCTCAACC+AGG | - | chr3.4:91381475-91381494 | MS.gene37431:CDS | 50.0% | |
| CAATCATACGGTGCTCCTCA+AGG | - | chr3.4:91381748-91381767 | MS.gene37431:CDS | 50.0% | |
| CAGCAACAGCAAAATCCTGG+GGG | - | chr3.4:91381151-91381170 | MS.gene37431:intron | 50.0% | |
| CCAGCAACAGCAAAATCCTG+GGG | - | chr3.4:91381150-91381169 | MS.gene37431:intron | 50.0% | |
| CCCAGCAACAGCAAAATCCT+GGG | - | chr3.4:91381149-91381168 | MS.gene37431:intron | 50.0% | |
| CCTGTGCAACAAGCTGGTTA+TGG | - | chr3.4:91380947-91380966 | MS.gene37431:intron | 50.0% | |
| CGGTGGATATTCCACCAACT+GGG | - | chr3.4:91381057-91381076 | MS.gene37431:intron | 50.0% | |
| CTAGGTCCATAACCAGACTG+TGG | + | chr3.4:91381544-91381563 | None:intergenic | 50.0% | |
| CTGGTTGAGGAGTTCCTTGT+TGG | + | chr3.4:91381477-91381496 | None:intergenic | 50.0% | |
| GACGGATGGTTGCACAATCT+GGG | - | chr3.4:91379365-91379384 | MS.gene37431:intron | 50.0% | |
| GAGAACCTGAATTCGTGCTC+CGG | + | chr3.4:91379579-91379598 | None:intergenic | 50.0% | |
| GATGGACCAGAGTATGATCC+AGG | + | chr3.4:91380983-91381002 | None:intergenic | 50.0% | |
| GCTACTGCATAACCTGGTTG+AGG | + | chr3.4:91381490-91381509 | None:intergenic | 50.0% | |
| GGCATGTTATACTGCGGTGA+TGG | + | chr3.4:91381001-91381020 | None:intergenic | 50.0% | |
| GGCTATGCTACCAACCAACA+AGG | - | chr3.4:91381460-91381479 | MS.gene37431:CDS | 50.0% | |
| GGCTGAGGCATGTTATACTG+CGG | + | chr3.4:91381007-91381026 | None:intergenic | 50.0% | |
| GGGAGTAATCCAACCCAAGA+AGG | - | chr3.4:91381367-91381386 | MS.gene37431:intron | 50.0% | |
| GGGTATGGTCCGCAATCATA+CGG | - | chr3.4:91381736-91381755 | MS.gene37431:CDS | 50.0% | |
| GGTTATAGCCAACCAGGACA+GGG | - | chr3.4:91381229-91381248 | MS.gene37431:intron | 50.0% | |
| TAACTCTGGCTGAGCATACC+CGG | + | chr3.4:91381689-91381708 | None:intergenic | 50.0% | |
| TACAGTCAACCTCCTTCCTC+TGG | - | chr3.4:91381208-91381227 | MS.gene37431:intron | 50.0% | |
| TATGATTGCGGACCATACCC+TGG | + | chr3.4:91381736-91381755 | None:intergenic | 50.0% | |
| TCAGCAGAAGAAACAGCGTC+AGG | + | chr3.4:91378368-91378387 | None:intergenic | 50.0% | |
| TCAGGTGGCTATACTCAGCA+AGG | - | chr3.4:91380881-91380900 | MS.gene37431:intron | 50.0% | |
| TCCTCTGGTTATAGCCAACC+AGG | - | chr3.4:91381223-91381242 | MS.gene37431:intron | 50.0% | |
| TCGCAGCAAGGTGGTAGTTA+TGG | - | chr3.4:91378173-91378192 | MS.gene37431:CDS | 50.0% | |
| TCTTGACCATAACCCTGTCC+TGG | + | chr3.4:91381244-91381263 | None:intergenic | 50.0% | |
| TGAGGAGGATAGCCTGCATA+TGG | + | chr3.4:91381031-91381050 | None:intergenic | 50.0% | |
| TGAGTAGACTGCTGGTGAGA+TGG | + | chr3.4:91381097-91381116 | None:intergenic | 50.0% | |
| TGGCTATAACCAGAGGAAGG+AGG | + | chr3.4:91381220-91381239 | None:intergenic | 50.0% | |
| TGGTTATAGCCAACCAGGAC+AGG | - | chr3.4:91381228-91381247 | MS.gene37431:intron | 50.0% | |
| TTCTACCGGAGCACGAATTC+AGG | - | chr3.4:91379571-91379590 | MS.gene37431:intron | 50.0% | |
| TTGACTTCCATAGGCCGCTT+GGG | + | chr3.4:91381521-91381540 | None:intergenic | 50.0% | |
| ! | CGATAACGGTGCTCCACAAT+CGG | - | chr3.4:91378118-91378137 | MS.gene37431:CDS | 50.0% |
| ! | CTTGGTTCGTTTGGGATCGT+AGG | + | chr3.4:91378096-91378115 | None:intergenic | 50.0% |
| ! | GATAACGGTGCTCCACAATC+GGG | - | chr3.4:91378119-91378138 | MS.gene37431:CDS | 50.0% |
| ! | GGTTGGCTATAACCAGAGGA+AGG | + | chr3.4:91381223-91381242 | None:intergenic | 50.0% |
| ! | TATGGCTCTGCTCCCAGTTA+TGG | - | chr3.4:91381340-91381359 | MS.gene37431:intron | 50.0% |
| ! | TCCTGGTTGGCTATAACCAG+AGG | + | chr3.4:91381227-91381246 | None:intergenic | 50.0% |
| !! | CAGTAGTGGGTTGGGAAGTT+TGG | + | chr3.4:91381429-91381448 | None:intergenic | 50.0% |
| !! | CAGTTGGTGGAATATCCACC+GGG | + | chr3.4:91381058-91381077 | None:intergenic | 50.0% |
| !! | CCAGTTGGTGGAATATCCAC+CGG | + | chr3.4:91381059-91381078 | None:intergenic | 50.0% |
| !! | CCATAACCAGCTTGTTGCAC+AGG | + | chr3.4:91380950-91380969 | None:intergenic | 50.0% |
| !! | CGATTGTGGAGCACCGTTAT+CGG | + | chr3.4:91378120-91378139 | None:intergenic | 50.0% |
| !! | GTAGTGGGTTGGGAAGTTTG+GGG | + | chr3.4:91381427-91381446 | None:intergenic | 50.0% |
| !! | GTTGGTAGCATAGCCTTGCT+GGG | + | chr3.4:91381455-91381474 | None:intergenic | 50.0% |
| !! | TAGTGGGTTGGGAAGTTTGG+GGG | + | chr3.4:91381426-91381445 | None:intergenic | 50.0% |
| !! | TGAGGAGCACCGTATGATTG+CGG | + | chr3.4:91381748-91381767 | None:intergenic | 50.0% |
| !! | TTTGCTGTTGCTGGGGTTGT+TGG | + | chr3.4:91381144-91381163 | None:intergenic | 50.0% |
| !!! | CCAGGATTTTGCTGTTGCTG+GGG | + | chr3.4:91381151-91381170 | None:intergenic | 50.0% |
| !!! | CCCAGGATTTTGCTGTTGCT+GGG | + | chr3.4:91381152-91381171 | None:intergenic | 50.0% |
| AACTGCACAGGCTGTTCCAC+AGG | - | chr3.4:91381867-91381886 | MS.gene37431:CDS | 55.0% | |
| AAGCCGCAATACTCGCAGCA+AGG | - | chr3.4:91378161-91378180 | MS.gene37431:CDS | 55.0% | |
| ACTGCACAGGCTGTTCCACA+GGG | - | chr3.4:91381868-91381887 | MS.gene37431:CDS | 55.0% | |
| ACTTTAGCAACACCGCCCTG+TGG | + | chr3.4:91381886-91381905 | None:intergenic | 55.0% | |
| AGCCAACCAGGACAGGGTTA+TGG | - | chr3.4:91381235-91381254 | MS.gene37431:intron | 55.0% | |
| ATACCTTTGCATCCTCCCCC+AGG | - | chr3.4:91379761-91379780 | MS.gene37431:intron | 55.0% | |
| ATGCCTCAGCCACCATATGC+AGG | - | chr3.4:91381016-91381035 | MS.gene37431:intron | 55.0% | |
| CACCAGCAGTCTACTCATGC+AGG | - | chr3.4:91381100-91381119 | MS.gene37431:intron | 55.0% | |
| CACCTGCATGAGTAGACTGC+TGG | + | chr3.4:91381105-91381124 | None:intergenic | 55.0% | |
| CAGCAGTCTACTCATGCAGG+TGG | - | chr3.4:91381103-91381122 | MS.gene37431:intron | 55.0% | |
| CCCCAGCAACAGCAAAATCC+TGG | - | chr3.4:91381148-91381167 | MS.gene37431:intron | 55.0% | |
| CCGGTGGATATTCCACCAAC+TGG | - | chr3.4:91381056-91381075 | MS.gene37431:intron | 55.0% | |
| CCTTGCTGGGCAACAGTAGT+GGG | + | chr3.4:91381442-91381461 | None:intergenic | 55.0% | |
| CGGATGGTTGCACAATCTGG+GGG | - | chr3.4:91379367-91379386 | MS.gene37431:intron | 55.0% | |
| CTGCTCCCAGTTATGGCAGT+GGG | - | chr3.4:91381347-91381366 | MS.gene37431:intron | 55.0% | |
| CTGTATGCAGACCCATCAGC+TGG | + | chr3.4:91381187-91381206 | None:intergenic | 55.0% | |
| GAATATCCACCGGGTTGCTG+AGG | + | chr3.4:91381049-91381068 | None:intergenic | 55.0% | |
| GACCATAACCCTGTCCTGGT+TGG | + | chr3.4:91381240-91381259 | None:intergenic | 55.0% | |
| GCTCTCTGAGTGCCTAACTC+TGG | + | chr3.4:91381703-91381722 | None:intergenic | 55.0% | |
| GGAGGATAGCCTGCATATGG+TGG | + | chr3.4:91381028-91381047 | None:intergenic | 55.0% | |
| GGGCAACCTGGATCATACTC+TGG | - | chr3.4:91380974-91380993 | MS.gene37431:intron | 55.0% | |
| GGGTATGCTCAGCCAGAGTT+AGG | - | chr3.4:91381688-91381707 | MS.gene37431:CDS | 55.0% | |
| GGTGAGATGGTGCAGTGGAT+TGG | + | chr3.4:91381084-91381103 | None:intergenic | 55.0% | |
| GGTTATGGCTATGGGCAACC+TGG | - | chr3.4:91380962-91380981 | MS.gene37431:intron | 55.0% | |
| GTAGATGAGCGCAAGTCCCA+AGG | + | chr3.4:91380434-91380453 | None:intergenic | 55.0% | |
| GTAGGGGCTACTGCATAACC+TGG | + | chr3.4:91381496-91381515 | None:intergenic | 55.0% | |
| GTCCTTCACAGCCAGCTGAT+GGG | - | chr3.4:91381173-91381192 | MS.gene37431:intron | 55.0% | |
| GTTGATGTATCACCTGGGGG+AGG | + | chr3.4:91379776-91379795 | None:intergenic | 55.0% | |
| TAGCCTGCATATGGTGGCTG+AGG | + | chr3.4:91381022-91381041 | None:intergenic | 55.0% | |
| TAGCGATGGAGCAACTGCAC+AGG | - | chr3.4:91381855-91381874 | MS.gene37431:CDS | 55.0% | |
| TCACAGTCACCTAGCACAGC+AGG | - | chr3.4:91381619-91381638 | MS.gene37431:CDS | 55.0% | |
| TCATACGGTGCTCCTCAAGG+TGG | - | chr3.4:91381751-91381770 | MS.gene37431:CDS | 55.0% | |
| TCTGCTCCCAGTTATGGCAG+TGG | - | chr3.4:91381346-91381365 | MS.gene37431:intron | 55.0% | |
| TTCCATATGACGGCGGAGTC+TGG | + | chr3.4:91381792-91381811 | None:intergenic | 55.0% | |
| TTGGGATCGTAGGAGAGTGG+TGG | + | chr3.4:91378086-91378105 | None:intergenic | 55.0% | |
| ! | AGTTGGAAGCGTGCCCTTCT+TGG | + | chr3.4:91381384-91381403 | None:intergenic | 55.0% |
| ! | CCACCTTGCTGCGAGTATTG+CGG | + | chr3.4:91378167-91378186 | None:intergenic | 55.0% |
| ! | CGTTTGGGATCGTAGGAGAG+TGG | + | chr3.4:91378089-91378108 | None:intergenic | 55.0% |
| ! | GAAGGGCACGCTTCCAACTA+TGG | - | chr3.4:91381385-91381404 | MS.gene37431:intron | 55.0% |
| ! | GACTTCGAGTTCGATGTCCG+TGG | + | chr3.4:91378003-91378022 | None:intergenic | 55.0% |
| ! | GTTGACTTCCATAGGCCGCT+TGG | + | chr3.4:91381522-91381541 | None:intergenic | 55.0% |
| ! | GTTGGAAGCGTGCCCTTCTT+GGG | + | chr3.4:91381383-91381402 | None:intergenic | 55.0% |
| ! | TTCGAGTTCGATGTCCGTGG+CGG | + | chr3.4:91378000-91378019 | None:intergenic | 55.0% |
| !! | AGAGAGCACCAGTGCAACCA+GGG | - | chr3.4:91381716-91381735 | MS.gene37431:CDS | 55.0% |
| !! | AGTGGATTGGTCCCAGTTGG+TGG | + | chr3.4:91381071-91381090 | None:intergenic | 55.0% |
| !! | AGTGGGTTGGGAAGTTTGGG+GGG | + | chr3.4:91381425-91381444 | None:intergenic | 55.0% |
| !! | CTGGGCAACAGTAGTGGGTT+GGG | + | chr3.4:91381437-91381456 | None:intergenic | 55.0% |
| !! | GCACTTGGCTTTTGAGAGGG+AGG | + | chr3.4:91381577-91381596 | None:intergenic | 55.0% |
| !! | GGTTGGTAGCATAGCCTTGC+TGG | + | chr3.4:91381456-91381475 | None:intergenic | 55.0% |
| !! | TGCAGTGGATTGGTCCCAGT+TGG | + | chr3.4:91381074-91381093 | None:intergenic | 55.0% |
| !! | TGGAGCACCGTTATCGGACT+TGG | + | chr3.4:91378114-91378133 | None:intergenic | 55.0% |
| !!! | CCCCAGGATTTTGCTGTTGC+TGG | + | chr3.4:91381153-91381172 | None:intergenic | 55.0% |
| AATCCCGACCACCGTCTAGC+TGG | - | chr3.4:91380909-91380928 | MS.gene37431:intron | 60.0% | |
| ACTTCCATAGGCCGCTTGGG+AGG | + | chr3.4:91381518-91381537 | None:intergenic | 60.0% | |
| AGCTAGACGGTGGTCGGGAT+TGG | + | chr3.4:91380910-91380929 | None:intergenic | 60.0% | |
| AGTAGCCCCTACCTCCCAAG+CGG | - | chr3.4:91381504-91381523 | MS.gene37431:CDS | 60.0% | |
| AGTTCGATGTCCGTGGCGGT+GGG | + | chr3.4:91377996-91378015 | None:intergenic | 60.0% | |
| ATAGGCCGCTTGGGAGGTAG+GGG | + | chr3.4:91381512-91381531 | None:intergenic | 60.0% | |
| ATCCCGACCACCGTCTAGCT+GGG | - | chr3.4:91380910-91380929 | MS.gene37431:intron | 60.0% | |
| CAGTCACCTAGCACAGCAGG+AGG | - | chr3.4:91381622-91381641 | MS.gene37431:CDS | 60.0% | |
| CATAGGCCGCTTGGGAGGTA+GGG | + | chr3.4:91381513-91381532 | None:intergenic | 60.0% | |
| CCATAGCCTCCTGCTGTGCT+AGG | + | chr3.4:91381631-91381650 | None:intergenic | 60.0% | |
| CCCACTACTGTTGCCCAGCA+AGG | - | chr3.4:91381439-91381458 | MS.gene37431:intron | 60.0% | |
| CCGCAATACTCGCAGCAAGG+TGG | - | chr3.4:91378164-91378183 | MS.gene37431:CDS | 60.0% | |
| CCTAGCACAGCAGGAGGCTA+TGG | - | chr3.4:91381628-91381647 | MS.gene37431:CDS | 60.0% | |
| CGATGAACAACCCACCGCCA+CGG | - | chr3.4:91377983-91378002 | MS.gene37431:CDS | 60.0% | |
| CTGCTGGTGAGATGGTGCAG+TGG | + | chr3.4:91381089-91381108 | None:intergenic | 60.0% | |
| CTTCTGGCGGTGGCACTAGA+CGG | - | chr3.4:91379347-91379366 | MS.gene37431:intron | 60.0% | |
| GAAGCGTGCCCTTCTTGGGT+TGG | + | chr3.4:91381379-91381398 | None:intergenic | 60.0% | |
| GACCCATCAGCTGGCTGTGA+AGG | + | chr3.4:91381178-91381197 | None:intergenic | 60.0% | |
| GCACCAGTGCAACCAGGGTA+TGG | - | chr3.4:91381721-91381740 | MS.gene37431:CDS | 60.0% | |
| GCCTTGCTGGGCAACAGTAG+TGG | + | chr3.4:91381443-91381462 | None:intergenic | 60.0% | |
| GCTCCAGCGTATGCTAGCGA+TGG | - | chr3.4:91381841-91381860 | MS.gene37431:CDS | 60.0% | |
| GCTCCATCGCTAGCATACGC+TGG | + | chr3.4:91381847-91381866 | None:intergenic | 60.0% | |
| GCTCGTCTTCTCAGCGTCAC+CGG | - | chr3.4:91378056-91378075 | MS.gene37431:CDS | 60.0% | |
| GCTGCTCCTGTGCAACAAGC+TGG | - | chr3.4:91380941-91380960 | MS.gene37431:intron | 60.0% | |
| GGACCATACCCTGGTTGCAC+TGG | + | chr3.4:91381727-91381746 | None:intergenic | 60.0% | |
| GGCTATCCTCCTCAGCAACC+CGG | - | chr3.4:91381037-91381056 | MS.gene37431:intron | 60.0% | |
| GGTCCTTCACAGCCAGCTGA+TGG | - | chr3.4:91381172-91381191 | MS.gene37431:intron | 60.0% | |
| GGTGACGCTGAGAAGACGAG+CGG | + | chr3.4:91378057-91378076 | None:intergenic | 60.0% | |
| TAGGCTGAAGCTGGGGCTTC+TGG | - | chr3.4:91379331-91379350 | MS.gene37431:intron | 60.0% | |
| TATCCACCGGGTTGCTGAGG+AGG | + | chr3.4:91381046-91381065 | None:intergenic | 60.0% | |
| TATCCTCCTCAGCAACCCGG+TGG | - | chr3.4:91381040-91381059 | MS.gene37431:intron | 60.0% | |
| TCACCTGGGGGAGGATGCAA+AGG | + | chr3.4:91379767-91379786 | None:intergenic | 60.0% | |
| TCTGGCTGAGCATACCCGGA+AGG | + | chr3.4:91381685-91381704 | None:intergenic | 60.0% | |
| TGTTGCACAGGAGCAGCAGG+AGG | + | chr3.4:91380938-91380957 | None:intergenic | 60.0% | |
| ! | GCTTGTTGCACAGGAGCAGC+AGG | + | chr3.4:91380941-91380960 | None:intergenic | 60.0% |
| !! | CAGAGAGCACCAGTGCAACC+AGG | - | chr3.4:91381715-91381734 | MS.gene37431:CDS | 60.0% |
| !! | GAGGGAGGAGCACCATAGCT+AGG | + | chr3.4:91381562-91381581 | None:intergenic | 60.0% |
| !! | GCTGGGCAACAGTAGTGGGT+TGG | + | chr3.4:91381438-91381457 | None:intergenic | 60.0% |
| AGCCCAGCTAGACGGTGGTC+GGG | + | chr3.4:91380915-91380934 | None:intergenic | 65.0% | |
| CAAGGTGGCCAGCCTGGCTA+TGG | - | chr3.4:91381766-91381785 | MS.gene37431:CDS | 65.0% | |
| CAGCTGACTGCCCGACGACA+TGG | - | chr3.4:91379688-91379707 | MS.gene37431:intron | 65.0% | |
| CCATAGGCCGCTTGGGAGGT+AGG | + | chr3.4:91381514-91381533 | None:intergenic | 65.0% | |
| CCTACCTCCCAAGCGGCCTA+TGG | - | chr3.4:91381511-91381530 | MS.gene37431:CDS | 65.0% | |
| CTGAGCATACCCGGAAGGCG+GGG | + | chr3.4:91381680-91381699 | None:intergenic | 65.0% | |
| GAGCCCAGCTAGACGGTGGT+CGG | + | chr3.4:91380916-91380935 | None:intergenic | 65.0% | |
| GAGTCTGGCCATAGCCAGGC+TGG | + | chr3.4:91381777-91381796 | None:intergenic | 65.0% | |
| GAGTTCGATGTCCGTGGCGG+TGG | + | chr3.4:91377997-91378016 | None:intergenic | 65.0% | |
| GCACAGGCTGTTCCACAGGG+CGG | - | chr3.4:91381871-91381890 | MS.gene37431:CDS | 65.0% | |
| GCAGGAGGAGCCCAGCTAGA+CGG | + | chr3.4:91380923-91380942 | None:intergenic | 65.0% | |
| GCTGAAGCTGGGGCTTCTGG+CGG | - | chr3.4:91379334-91379353 | MS.gene37431:intron | 65.0% | |
| GCTGAGCATACCCGGAAGGC+GGG | + | chr3.4:91381681-91381700 | None:intergenic | 65.0% | |
| GGCCAGACTCCGCCGTCATA+TGG | - | chr3.4:91381787-91381806 | MS.gene37431:CDS | 65.0% | |
| GGCTGAGCATACCCGGAAGG+CGG | + | chr3.4:91381682-91381701 | None:intergenic | 65.0% | |
| TGAGCATACCCGGAAGGCGG+GGG | + | chr3.4:91381679-91381698 | None:intergenic | 65.0% | |
| TGGCGGTGGCACTAGACGGA+TGG | - | chr3.4:91379351-91379370 | MS.gene37431:intron | 65.0% | |
| ! | GTAGGAGAGTGGTGGAGCGC+CGG | + | chr3.4:91378078-91378097 | None:intergenic | 65.0% |
| ! | TAGCCAGGCTGGCCACCTTG+AGG | + | chr3.4:91381766-91381785 | None:intergenic | 65.0% |
| GAAGCTGGGGCTTCTGGCGG+TGG | - | chr3.4:91379337-91379356 | MS.gene37431:intron | 70.0% | |
| GCTCCTCAAGGTGGCCAGCC+TGG | - | chr3.4:91381760-91381779 | MS.gene37431:CDS | 70.0% | |
| GCTGGCTGTGAAGGACCCCC+AGG | + | chr3.4:91381169-91381188 | None:intergenic | 70.0% | |
| GGAGGAGCCCAGCTAGACGG+TGG | + | chr3.4:91380920-91380939 | None:intergenic | 70.0% | |
| GGCGGAGTCTGGCCATAGCC+AGG | + | chr3.4:91381781-91381800 | None:intergenic | 70.0% | |
| TCTAGCCAGCCCCCGCCTTC+CGG | - | chr3.4:91381667-91381686 | MS.gene37431:CDS | 70.0% | |
| !! | GAAGGCGGGGGCTGGCTAGA+GGG | + | chr3.4:91381667-91381686 | None:intergenic | 70.0% |
| CATACCCGGAAGGCGGGGGC+TGG | + | chr3.4:91381675-91381694 | None:intergenic | 75.0% | |
| CTAGCCAGCCCCCGCCTTCC+GGG | - | chr3.4:91381668-91381687 | MS.gene37431:CDS | 75.0% | |
| !! | GGAAGGCGGGGGCTGGCTAG+AGG | + | chr3.4:91381668-91381687 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91377942 | 91381921 | 91377942 | ID=MS.gene37431 |
| chr3.4 | mRNA | 91377942 | 91381921 | 91377942 | ID=MS.gene37431.t1;Parent=MS.gene37431 |
| chr3.4 | exon | 91381448 | 91381921 | 91381448 | ID=MS.gene37431.t1.exon1;Parent=MS.gene37431.t1 |
| chr3.4 | CDS | 91381448 | 91381921 | 91381448 | ID=cds.MS.gene37431.t1;Parent=MS.gene37431.t1 |
| chr3.4 | exon | 91380440 | 91380529 | 91380440 | ID=MS.gene37431.t1.exon2;Parent=MS.gene37431.t1 |
| chr3.4 | CDS | 91380440 | 91380529 | 91380440 | ID=cds.MS.gene37431.t1;Parent=MS.gene37431.t1 |
| chr3.4 | exon | 91380271 | 91380342 | 91380271 | ID=MS.gene37431.t1.exon3;Parent=MS.gene37431.t1 |
| chr3.4 | CDS | 91380271 | 91380342 | 91380271 | ID=cds.MS.gene37431.t1;Parent=MS.gene37431.t1 |
| chr3.4 | exon | 91379986 | 91380105 | 91379986 | ID=MS.gene37431.t1.exon4;Parent=MS.gene37431.t1 |
| chr3.4 | CDS | 91379986 | 91380105 | 91379986 | ID=cds.MS.gene37431.t1;Parent=MS.gene37431.t1 |
| chr3.4 | exon | 91377942 | 91379006 | 91377942 | ID=MS.gene37431.t1.exon5;Parent=MS.gene37431.t1 |
| chr3.4 | CDS | 91377942 | 91379006 | 91377942 | ID=cds.MS.gene37431.t1;Parent=MS.gene37431.t1 |
| Gene Sequence |
| Protein sequence |
