Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38287.t1 | XP_003598158.1 | 97.1 | 418 | 12 | 0 | 1 | 418 | 1 | 418 | 4.30E-231 | 810.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38287.t1 | A5DK49 | 40.0 | 105 | 59 | 2 | 182 | 286 | 177 | 277 | 1.4e-15 | 85.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38287.t1 | G7IVJ0 | 97.1 | 418 | 12 | 0 | 1 | 418 | 1 | 418 | 3.1e-231 | 810.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050119 | MS.gene38287 | 0.838329 | 3.07E-57 | -1.69E-46 |
| MS.gene052020 | MS.gene38287 | 0.819299 | 1.25E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene38287 | 0.812367 | 4.39E-51 | -1.69E-46 |
| MS.gene052612 | MS.gene38287 | 0.807871 | 4.09E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene38287 | 0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene055512 | MS.gene38287 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene057047 | MS.gene38287 | 0.807968 | 3.90E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene38287 | 0.813115 | 3.01E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene38287 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene38287 | 0.81738 | 3.40E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38287.t1 | MTR_5g096090 | 97.847 | 418 | 9 | 0 | 1 | 418 | 1 | 418 | 0.0 | 858 |
| MS.gene38287.t1 | MTR_3g007930 | 97.608 | 418 | 10 | 0 | 1 | 418 | 1 | 418 | 0.0 | 857 |
| MS.gene38287.t1 | MTR_3g007930 | 99.298 | 285 | 2 | 0 | 1 | 285 | 1 | 285 | 0.0 | 599 |
| MS.gene38287.t1 | MTR_5g096090 | 98.947 | 285 | 3 | 0 | 1 | 285 | 1 | 285 | 0.0 | 596 |
| MS.gene38287.t1 | MTR_7g033625 | 49.828 | 291 | 137 | 3 | 55 | 336 | 2 | 292 | 3.84e-99 | 301 |
| MS.gene38287.t1 | MTR_6g004780 | 47.386 | 306 | 151 | 4 | 60 | 359 | 15 | 316 | 2.24e-96 | 295 |
| MS.gene38287.t1 | MTR_6g004750 | 36.216 | 185 | 89 | 4 | 155 | 335 | 19 | 178 | 3.63e-30 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38287.t1 | AT4G26620 | 63.380 | 426 | 122 | 11 | 7 | 407 | 5 | 421 | 0.0 | 518 |
| MS.gene38287.t1 | AT5G55900 | 56.968 | 409 | 145 | 9 | 7 | 407 | 5 | 390 | 1.07e-146 | 426 |
| MS.gene38287.t1 | AT5G55900 | 59.655 | 290 | 96 | 5 | 126 | 407 | 10 | 286 | 5.99e-110 | 328 |
| MS.gene38287.t1 | AT3G27570 | 50.877 | 285 | 126 | 7 | 60 | 339 | 17 | 292 | 2.31e-87 | 271 |
| MS.gene38287.t1 | AT3G27570 | 50.877 | 285 | 126 | 7 | 60 | 339 | 56 | 331 | 1.18e-86 | 271 |
| MS.gene38287.t1 | AT5G40510 | 46.975 | 281 | 134 | 5 | 60 | 338 | 15 | 282 | 4.74e-86 | 268 |
| MS.gene38287.t1 | AT5G40510 | 46.975 | 281 | 134 | 5 | 60 | 338 | 51 | 318 | 3.29e-85 | 267 |
Find 121 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGAACCTTTCAAACTTTC+AGG | 0.135608 | 5.3:-77723968 | None:intergenic |
| GCAGGAAATGTCATTATATT+TGG | 0.179898 | 5.3:+77724142 | MS.gene38287:CDS |
| TTAGCCCGTGCTCGCACATT+GGG | 0.302143 | 5.3:+77724107 | MS.gene38287:CDS |
| TGGGGTTTGTGGACCTGTTT+TGG | 0.325042 | 5.3:+77724030 | MS.gene38287:CDS |
| GCACACAGTGCCAGCGTTGC+AGG | 0.325607 | 5.3:-77726798 | None:intergenic |
| GGGAGATTATAGACTCATTA+TGG | 0.327019 | 5.3:+77724395 | MS.gene38287:CDS |
| AAACTTCCAGAAGCGCTTCT+TGG | 0.342260 | 5.3:-77722100 | None:intergenic |
| GTGAGCTGCTGCCAAGAAAA+TGG | 0.344854 | 5.3:+77725915 | MS.gene38287:CDS |
| GATGTTGCTGATGTTGAGTT+TGG | 0.346397 | 5.3:+77722151 | MS.gene38287:CDS |
| GACCCTCACATATCGTTAAC+CGG | 0.349668 | 5.3:-77723726 | None:intergenic |
| ATGAAAGAACACCATCGTTC+TGG | 0.355681 | 5.3:-77722123 | None:intergenic |
| TGGCAGCAGCTCACTCCATT+TGG | 0.355874 | 5.3:-77725906 | None:intergenic |
| GTTACAAGAATCCCAGGTTT+TGG | 0.363437 | 5.3:+77722248 | MS.gene38287:CDS |
| AACGATGGTGTTCTTTCATC+TGG | 0.374524 | 5.3:+77722127 | MS.gene38287:CDS |
| ACCGACCCAAGAAGCGCTTC+TGG | 0.375953 | 5.3:+77722094 | MS.gene38287:CDS |
| TTCAAACTTTCAGGTGTTCC+AGG | 0.376030 | 5.3:-77723959 | None:intergenic |
| AACTTCCAGAAGCGCTTCTT+GGG | 0.394619 | 5.3:-77722099 | None:intergenic |
| CTGAATCTATTAACCAAAAC+AGG | 0.401968 | 5.3:-77724043 | None:intergenic |
| ACGGGACTGAAACATCTAAT+GGG | 0.409573 | 5.3:+77723752 | MS.gene38287:CDS |
| CAGTTCAGCTCCTGCAACGC+TGG | 0.415932 | 5.3:+77726788 | MS.gene38287:CDS |
| AGAGAACTTTGTCGAAAATC+AGG | 0.417139 | 5.3:-77722184 | None:intergenic |
| TTTCGACAAAGTTCTCTTGT+TGG | 0.438399 | 5.3:+77722190 | MS.gene38287:CDS |
| GACGGGACTGAAACATCTAA+TGG | 0.438503 | 5.3:+77723751 | MS.gene38287:CDS |
| TGATGGGATTGTGAATGTTA+AGG | 0.442781 | 5.3:-77722017 | None:intergenic |
| TGACAGCATGGCTTGACGGC+TGG | 0.448113 | 5.3:+77726099 | MS.gene38287:CDS |
| GACAGCATGGCTTGACGGCT+GGG | 0.454014 | 5.3:+77726100 | MS.gene38287:CDS |
| TTCCTGACATGATCAGATAC+AGG | 0.459679 | 5.3:+77723788 | MS.gene38287:CDS |
| AGCAATAACGGTACATCCTC+CGG | 0.464324 | 5.3:-77724352 | None:intergenic |
| GATGGGATTGTGAATGTTAA+GGG | 0.464399 | 5.3:-77722016 | None:intergenic |
| AAGCGGTTGCCGACGGCACA+TGG | 0.465727 | 5.3:-77726714 | None:intergenic |
| CAACCGCTTCACCTGCACTA+AGG | 0.469061 | 5.3:+77726728 | MS.gene38287:CDS |
| CTGAGTTTGATCGCTTGCCT+AGG | 0.469513 | 5.3:+77722290 | MS.gene38287:CDS |
| AACTCAGCAGCTTCAATCCT+AGG | 0.469774 | 5.3:-77722274 | None:intergenic |
| CTAGAGATCCATTCAGTACA+GGG | 0.475454 | 5.3:-77725860 | None:intergenic |
| ATATTTGGATCAAGCATGAA+TGG | 0.478059 | 5.3:+77724157 | MS.gene38287:CDS |
| CGTTGCAGGAGCTGAACTGC+TGG | 0.478461 | 5.3:-77726784 | None:intergenic |
| TTCAACAACATATCATGAAA+GGG | 0.478501 | 5.3:+77724374 | MS.gene38287:CDS |
| CACTAGGCTTACGCTGTAAG+AGG | 0.479485 | 5.3:-77726850 | None:intergenic |
| GTTAGCCCGTGCTCGCACAT+TGG | 0.479526 | 5.3:+77724106 | MS.gene38287:CDS |
| TCTAGAGATCCATTCAGTAC+AGG | 0.481178 | 5.3:-77725861 | None:intergenic |
| AAGAATGGAGAGTGGCTACC+TGG | 0.483034 | 5.3:+77723941 | MS.gene38287:CDS |
| AGCAGCTCACTCCATTTGGT+TGG | 0.483781 | 5.3:-77725902 | None:intergenic |
| GGCTTCTGCTGAGTTGCATA+GGG | 0.483816 | 5.3:+77725823 | MS.gene38287:CDS |
| AGGCTTCTGCTGAGTTGCAT+AGG | 0.487626 | 5.3:+77725822 | MS.gene38287:CDS |
| GAAGAAAACCCTGTACTGAA+TGG | 0.488090 | 5.3:+77725852 | MS.gene38287:CDS |
| GATCGCAGATGTGGGGTTTG+TGG | 0.489205 | 5.3:+77724019 | MS.gene38287:CDS |
| TTCTTTGTTACAAGAATCCC+AGG | 0.490693 | 5.3:+77722242 | MS.gene38287:CDS |
| GAAGAAGTTCTTGTGAAGAA+TGG | 0.491498 | 5.3:+77723926 | MS.gene38287:CDS |
| AACCTGTATCTGATCATGTC+AGG | 0.492493 | 5.3:-77723790 | None:intergenic |
| TGTTGTCTGTGCTGCTGTAT+CGG | 0.492568 | 5.3:+77726151 | MS.gene38287:CDS |
| TATTTCCATCAGGGGTCAGA+TGG | 0.493546 | 5.3:+77725761 | MS.gene38287:intron |
| TCTATGACAGCATGGCTTGA+CGG | 0.493884 | 5.3:+77726095 | MS.gene38287:CDS |
| AACCGCTTCACCTGCACTAA+GGG | 0.499033 | 5.3:+77726729 | MS.gene38287:CDS |
| ACGAGCTGCTGCCAACCAAA+TGG | 0.500882 | 5.3:+77725891 | MS.gene38287:CDS |
| TCTCGAATCAACAGCGGGAA+AGG | 0.505074 | 5.3:+77726053 | MS.gene38287:CDS |
| CTTCAACAACATATCATGAA+AGG | 0.512393 | 5.3:+77724373 | MS.gene38287:CDS |
| TGACGCCTGACTCTGACAAA+AGG | 0.522283 | 5.3:-77725946 | None:intergenic |
| TCCAGAAGCGCTTCTTGGGT+CGG | 0.528657 | 5.3:-77722095 | None:intergenic |
| GGATCACGTGATCGCAGATG+TGG | 0.533389 | 5.3:+77724010 | MS.gene38287:CDS |
| ATATGTTGTTGAAGCAATAA+CGG | 0.533696 | 5.3:-77724364 | None:intergenic |
| TAGGAAGAATCATATGAAGA+AGG | 0.535864 | 5.3:+77722336 | MS.gene38287:CDS |
| ATCAGCTGAAAGCTTTGCCT+CGG | 0.537129 | 5.3:-77726003 | None:intergenic |
| CGCCCTTAGTGCAGGTGAAG+CGG | 0.537396 | 5.3:-77726731 | None:intergenic |
| ATAGAGTATCATGGTCTACA+AGG | 0.540083 | 5.3:+77724073 | MS.gene38287:CDS |
| AATCCTAGGAGGCCAAAACC+TGG | 0.541943 | 5.3:-77722260 | None:intergenic |
| GCGGGAAAGGAGCTTCATGC+AGG | 0.544343 | 5.3:+77726066 | MS.gene38287:CDS |
| CAGGTATGGATATGTTGCTC+CGG | 0.547551 | 5.3:+77724333 | MS.gene38287:intron |
| TTTATGCTGCTGTTAAAGCT+AGG | 0.548804 | 5.3:+77722317 | MS.gene38287:CDS |
| TCTCTCAAACAAACAATGAT+GGG | 0.550896 | 5.3:+77721968 | None:intergenic |
| GGTGATTGGTGAGGAATGAG+AGG | 0.553624 | 5.3:-77722044 | None:intergenic |
| GAGGAATGAGAGGAAGATGA+TGG | 0.557349 | 5.3:-77722034 | None:intergenic |
| AGGAATGAGAGGAAGATGAT+GGG | 0.558309 | 5.3:-77722033 | None:intergenic |
| GAACTGCTGGTGTCATTGCA+AGG | 0.560842 | 5.3:-77726771 | None:intergenic |
| ACTGCAGTCGCCCTTAGTGC+AGG | 0.562599 | 5.3:-77726739 | None:intergenic |
| TAGCCCGTGCTCGCACATTG+GGG | 0.565186 | 5.3:+77724108 | MS.gene38287:CDS |
| ATTTCCATCAGGGGTCAGAT+GGG | 0.569080 | 5.3:+77725762 | MS.gene38287:intron |
| AGTGTGTCAGAGACGGTGAT+TGG | 0.569202 | 5.3:-77722058 | None:intergenic |
| GATCACGTGATCGCAGATGT+GGG | 0.572702 | 5.3:+77724011 | MS.gene38287:CDS |
| GGAACACCTGAAAGTTTGAA+AGG | 0.573138 | 5.3:+77723962 | MS.gene38287:CDS |
| CAAGGCTGCCCATGTGCCGT+CGG | 0.574981 | 5.3:+77726705 | MS.gene38287:CDS |
| CGATATGTGAGGGTCATGAC+GGG | 0.576926 | 5.3:+77723734 | MS.gene38287:CDS |
| TCAAACTCCGCACTCTCACA+AGG | 0.580853 | 5.3:+77726687 | MS.gene38287:CDS |
| CGGTTTCTCGAATCAACAGC+GGG | 0.584126 | 5.3:+77726048 | MS.gene38287:CDS |
| GCAGGTGAAGCGGTTGCCGA+CGG | 0.586364 | 5.3:-77726721 | None:intergenic |
| TTGTCAGAGTCAGGCGTCAG+TGG | 0.586534 | 5.3:+77725950 | MS.gene38287:CDS |
| AGCCCGTGCTCGCACATTGG+GGG | 0.586972 | 5.3:+77724109 | MS.gene38287:CDS |
| TGCACTAAGGGCGACTGCAG+TGG | 0.587301 | 5.3:+77726741 | MS.gene38287:CDS |
| TAATAAGATCAGCAAGGCGG+CGG | 0.589393 | 5.3:+77726028 | MS.gene38287:CDS |
| AGGGAAGAAATAGAGTATCA+TGG | 0.590070 | 5.3:+77724064 | MS.gene38287:CDS |
| ATCCTAGGAGGCCAAAACCT+GGG | 0.598991 | 5.3:-77722259 | None:intergenic |
| ACGATATGTGAGGGTCATGA+CGG | 0.605517 | 5.3:+77723733 | MS.gene38287:CDS |
| ACAGCAGCATAAAGCAACCT+AGG | 0.605995 | 5.3:-77722307 | None:intergenic |
| GAAGAATCATATGAAGAAGG+AGG | 0.606834 | 5.3:+77722339 | MS.gene38287:CDS |
| ACCCTCACATATCGTTAACC+GGG | 0.613685 | 5.3:-77723725 | None:intergenic |
| AACTGCTGGTGTCATTGCAA+GGG | 0.614853 | 5.3:-77726770 | None:intergenic |
| AGCGGTTGCCGACGGCACAT+GGG | 0.617455 | 5.3:-77726713 | None:intergenic |
| TGGGCAGCCTTGTGAGAGTG+CGG | 0.617477 | 5.3:-77726694 | None:intergenic |
| GTATGGATATGTTGCTCCGG+AGG | 0.628869 | 5.3:+77724336 | MS.gene38287:CDS |
| TCTGGAAGTTTCCAGAACGA+TGG | 0.633045 | 5.3:+77722112 | MS.gene38287:CDS |
| AGCATGAATGGAGAAGTCAC+TGG | 0.635287 | 5.3:+77724169 | MS.gene38287:CDS |
| GGTTTCGATCTATGACAGCA+TGG | 0.639546 | 5.3:+77726087 | MS.gene38287:CDS |
| CTCCGATGTCATCGAGACCG+AGG | 0.640492 | 5.3:+77725986 | MS.gene38287:CDS |
| TCAACAACATATCATGAAAG+GGG | 0.643501 | 5.3:+77724375 | MS.gene38287:CDS |
| ACTATCAAGTGTGTCAGAGA+CGG | 0.646005 | 5.3:-77722065 | None:intergenic |
| CGGGACTGAAACATCTAATG+GGG | 0.653982 | 5.3:+77723753 | MS.gene38287:CDS |
| ATGGAGAAGTCACTGGACAC+TGG | 0.656231 | 5.3:+77724176 | MS.gene38287:CDS |
| AAGCGCTTCTTGGGTCGGTG+AGG | 0.656522 | 5.3:-77722090 | None:intergenic |
| GACCCGGTTAACGATATGTG+AGG | 0.656819 | 5.3:+77723723 | MS.gene38287:intron |
| TTCTTGTGAAGAATGGAGAG+TGG | 0.662950 | 5.3:+77723933 | MS.gene38287:CDS |
| ATCACGTGATCGCAGATGTG+GGG | 0.664665 | 5.3:+77724012 | MS.gene38287:CDS |
| CGCTGGCACTGTGTGCATCG+TGG | 0.668259 | 5.3:+77726805 | MS.gene38287:CDS |
| TCAGCAGCTTCAATCCTAGG+AGG | 0.668429 | 5.3:-77722271 | None:intergenic |
| TGCCTCGGTCTCGATGACAT+CGG | 0.669399 | 5.3:-77725988 | None:intergenic |
| AAATACAAAAGCAAGAACAA+AGG | 0.675736 | 5.3:+77725802 | MS.gene38287:CDS |
| TGATAATAATAAGATCAGCA+AGG | 0.682577 | 5.3:+77726022 | MS.gene38287:CDS |
| AGATTATAGACTCATTATGG+AGG | 0.687669 | 5.3:+77724398 | MS.gene38287:CDS |
| GCTTCTGCTGAGTTGCATAG+GGG | 0.693692 | 5.3:+77725824 | MS.gene38287:CDS |
| ACCCGGTTAACGATATGTGA+GGG | 0.693772 | 5.3:+77723724 | MS.gene38287:CDS |
| GTCAGAGACGGTGATTGGTG+AGG | 0.699707 | 5.3:-77722053 | None:intergenic |
| GCGGTTTCTCGAATCAACAG+CGG | 0.724966 | 5.3:+77726047 | MS.gene38287:CDS |
| TAATAATAAGATCAGCAAGG+CGG | 0.744569 | 5.3:+77726025 | MS.gene38287:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAATTAAGCTTT+TGG | + | chr5.3:77722707-77722726 | MS.gene38287:intron | 10.0% |
| !!! | AAAAAAAAAATTAAGCTTTT+GGG | + | chr5.3:77722708-77722727 | MS.gene38287:intron | 10.0% |
| !!! | GTTTTAACTTTTTAATTTTA+AGG | + | chr5.3:77722552-77722571 | MS.gene38287:intron | 10.0% |
| !!! | TAAAAGTATTGTAATTTTAT+TGG | - | chr5.3:77725303-77725322 | None:intergenic | 10.0% |
| !!! | TAGTTTTAGTTATATTAATA+CGG | + | chr5.3:77724527-77724546 | MS.gene38287:intron | 10.0% |
| !!! | TTTTGGTTTATATTTTTTTT+TGG | + | chr5.3:77722912-77722931 | MS.gene38287:intron | 10.0% |
| !! | AAAATATTTGCATTTCAAAA+AGG | + | chr5.3:77724737-77724756 | MS.gene38287:intron | 15.0% |
| !! | AAATATTTGCATTTCAAAAA+GGG | + | chr5.3:77724738-77724757 | MS.gene38287:intron | 15.0% |
| !! | ACAATTTCAATTTGAAAATA+TGG | - | chr5.3:77724868-77724887 | None:intergenic | 15.0% |
| !! | ATACATATTAAGCAATATAT+TGG | - | chr5.3:77725661-77725680 | None:intergenic | 15.0% |
| !! | ATATTGCTTAATATGTATTT+GGG | + | chr5.3:77725663-77725682 | MS.gene38287:intron | 15.0% |
| !! | GTTCATAATTCATTTAATAA+GGG | + | chr5.3:77724696-77724715 | MS.gene38287:intron | 15.0% |
| !! | TAATTGTGGAATATTATTAT+TGG | + | chr5.3:77726390-77726409 | MS.gene38287:intron | 15.0% |
| !! | TATATTGCTTAATATGTATT+TGG | + | chr5.3:77725662-77725681 | MS.gene38287:intron | 15.0% |
| !!! | ATGTTTTTTTTAATCTGAAT+TGG | + | chr5.3:77724812-77724831 | MS.gene38287:intron | 15.0% |
| !!! | CAAATATTTTCTAAAACTTA+AGG | - | chr5.3:77724727-77724746 | None:intergenic | 15.0% |
| !!! | GTGATTTTTAGATTATTTAT+TGG | + | chr5.3:77723244-77723263 | MS.gene38287:intron | 15.0% |
| !!! | TAATTGTTTTGTGATTTTTT+GGG | + | chr5.3:77722625-77722644 | MS.gene38287:intron | 15.0% |
| !!! | TTCATAACTTGAATTATTTT+TGG | - | chr5.3:77725379-77725398 | None:intergenic | 15.0% |
| !!! | TTGTAAAAAATTAAGCTTTT+GGG | + | chr5.3:77723275-77723294 | MS.gene38287:intron | 15.0% |
| !!! | TTGTAAAAATTTAAGCTTTT+GGG | + | chr5.3:77722463-77722482 | MS.gene38287:intron | 15.0% |
| !! | AATATTTGATTCATTTGTGA+AGG | + | chr5.3:77723832-77723851 | MS.gene38287:intron | 20.0% |
| !! | ATAAATGAATGATATTAGTG+AGG | + | chr5.3:77722757-77722776 | MS.gene38287:intron | 20.0% |
| !! | ATAATCAATATGGTAAACAA+CGG | - | chr5.3:77724279-77724298 | None:intergenic | 20.0% |
| !! | ATATCAGTTGAATAGAATAT+AGG | - | chr5.3:77724310-77724329 | None:intergenic | 20.0% |
| !! | GAGATATATCATAATGAATT+GGG | + | chr5.3:77725513-77725532 | MS.gene38287:intron | 20.0% |
| !! | GCTTTACAATAAATTGAAAA+AGG | - | chr5.3:77726523-77726542 | None:intergenic | 20.0% |
| !! | GGTTCATAATTCATTTAATA+AGG | + | chr5.3:77724695-77724714 | MS.gene38287:intron | 20.0% |
| !! | TCATAATTCTTTATGTTATC+AGG | + | chr5.3:77724431-77724450 | MS.gene38287:intron | 20.0% |
| !! | TCATTCTCTCAAATTATTAT+TGG | + | chr5.3:77725089-77725108 | MS.gene38287:intron | 20.0% |
| !! | TGAGATATATCATAATGAAT+TGG | + | chr5.3:77725512-77725531 | MS.gene38287:intron | 20.0% |
| !! | TTCAATTTATTGTAAAGCTT+TGG | + | chr5.3:77726525-77726544 | MS.gene38287:intron | 20.0% |
| !!! | AAGTATTTATAAGTTTGTTC+AGG | + | chr5.3:77726480-77726499 | MS.gene38287:intron | 20.0% |
| !!! | CTAATTGTTTTGTGATTTTT+TGG | + | chr5.3:77722624-77722643 | MS.gene38287:intron | 20.0% |
| !!! | CTTGTAAAAAATTAAGCTTT+TGG | + | chr5.3:77723274-77723293 | MS.gene38287:intron | 20.0% |
| !!! | CTTGTAAAAATTTAAGCTTT+TGG | + | chr5.3:77723513-77723532 | MS.gene38287:intron | 20.0% |
| !!! | GTTGTAAAAATTTAAGCTTT+TGG | + | chr5.3:77722462-77722481 | MS.gene38287:intron | 20.0% |
| !!! | TGTCTGTGTTATTATTATTT+AGG | + | chr5.3:77726225-77726244 | MS.gene38287:intron | 20.0% |
| !!! | TTATTTTGACCAATCATTAT+TGG | + | chr5.3:77726313-77726332 | MS.gene38287:intron | 20.0% |
| !!! | TTGTAAAAAAACTAAGCTTT+TGG | + | chr5.3:77722895-77722914 | MS.gene38287:intron | 20.0% |
| !!! | TTGTAAAAATTCAAGCTTTT+TGG | + | chr5.3:77723086-77723105 | MS.gene38287:intron | 20.0% |
| ! | AAAACCTCATTAATTTCAAG+TGG | - | chr5.3:77722960-77722979 | None:intergenic | 25.0% |
| ! | AAATACAAAAGCAAGAACAA+AGG | + | chr5.3:77725802-77725821 | MS.gene38287:CDS | 25.0% |
| ! | AAATATCCATAAGTCAACTT+TGG | + | chr5.3:77724839-77724858 | MS.gene38287:intron | 25.0% |
| ! | ATATGTTGTTGAAGCAATAA+CGG | - | chr5.3:77724367-77724386 | None:intergenic | 25.0% |
| ! | TAATCCACTTGAAATTAATG+AGG | + | chr5.3:77722953-77722972 | MS.gene38287:intron | 25.0% |
| ! | TACAAAGTTGTCAAAAAATG+TGG | + | chr5.3:77725428-77725447 | MS.gene38287:intron | 25.0% |
| ! | TATAAATACTTCATATCCTG+AGG | - | chr5.3:77726471-77726490 | None:intergenic | 25.0% |
| ! | TATAATTGTGCTTATGTTAC+TGG | - | chr5.3:77725334-77725353 | None:intergenic | 25.0% |
| ! | TATGTACAGATTAAGCTAAT+AGG | - | chr5.3:77726435-77726454 | None:intergenic | 25.0% |
| ! | TCAAATGTCAAAAGAAAAGT+AGG | + | chr5.3:77725399-77725418 | MS.gene38287:intron | 25.0% |
| ! | TCAAGACTCAAATTGTAATT+CGG | + | chr5.3:77725221-77725240 | MS.gene38287:intron | 25.0% |
| ! | TGATAATAATAAGATCAGCA+AGG | + | chr5.3:77726022-77726041 | MS.gene38287:CDS | 25.0% |
| ! | TTATGAATGAATGATACACT+TGG | + | chr5.3:77723133-77723152 | MS.gene38287:intron | 25.0% |
| ! | TTCAAATTGAAATTGTGTTC+AGG | + | chr5.3:77724872-77724891 | MS.gene38287:intron | 25.0% |
| ! | TTCAACAACATATCATGAAA+GGG | + | chr5.3:77724374-77724393 | MS.gene38287:CDS | 25.0% |
| ! | TTCTTTGAATATTTCCATCA+GGG | + | chr5.3:77725752-77725771 | MS.gene38287:intron | 25.0% |
| ! | TTGACTGCAAAATGTTAATA+TGG | + | chr5.3:77723866-77723885 | MS.gene38287:intron | 25.0% |
| ! | TTGATTGTATTGTGAAAATG+TGG | + | chr5.3:77723653-77723672 | MS.gene38287:intron | 25.0% |
| !! | TAAAACAAAGTACTTATCAC+CGG | + | chr5.3:77725161-77725180 | MS.gene38287:intron | 25.0% |
| !! | TGGAATATTATTATTGGCTA+TGG | + | chr5.3:77726396-77726415 | MS.gene38287:intron | 25.0% |
| !! | TTTTCACAACACATTCAATT+AGG | - | chr5.3:77723208-77723227 | None:intergenic | 25.0% |
| !!! | CTTTTGAGTTAAGAACTATA+TGG | + | chr5.3:77722982-77723001 | MS.gene38287:intron | 25.0% |
| !!! | GTGCTAATTGATTTTTTACA+AGG | + | chr5.3:77723458-77723477 | MS.gene38287:intron | 25.0% |
| !!! | GTGTTGATTTTGTGATTTTT+TGG | + | chr5.3:77722421-77722440 | MS.gene38287:intron | 25.0% |
| !!! | TGATTTTTTACAAGGTTATG+TGG | + | chr5.3:77723466-77723485 | MS.gene38287:intron | 25.0% |
| !!! | TGTTTTGGTTAATAGATTCA+GGG | + | chr5.3:77724045-77724064 | MS.gene38287:CDS | 25.0% |
| !!! | TTGATTTTGTGATTTTTTGG+TGG | + | chr5.3:77722424-77722443 | MS.gene38287:intron | 25.0% |
| AAGTTGTCAAAAAATGTGGT+TGG | + | chr5.3:77725432-77725451 | MS.gene38287:intron | 30.0% | |
| AATGAATCACTACCTAAACT+TGG | - | chr5.3:77725463-77725482 | None:intergenic | 30.0% | |
| AATGAATTGGGATTGTGATT+GGG | + | chr5.3:77725525-77725544 | MS.gene38287:intron | 30.0% | |
| AGATTATAGACTCATTATGG+AGG | + | chr5.3:77724398-77724417 | MS.gene38287:CDS | 30.0% | |
| ATATTTGGATCAAGCATGAA+TGG | + | chr5.3:77724157-77724176 | MS.gene38287:CDS | 30.0% | |
| ATGTAATCAATCCTATGTGT+CGG | - | chr5.3:77725060-77725079 | None:intergenic | 30.0% | |
| ATTGCCAACAAAAAAACTTG+CGG | - | chr5.3:77724976-77724995 | None:intergenic | 30.0% | |
| CAAACAAGTAGCAGTAAAAA+GGG | - | chr5.3:77724788-77724807 | None:intergenic | 30.0% | |
| CAAGACTCAAATTGTAATTC+GGG | + | chr5.3:77725222-77725241 | MS.gene38287:intron | 30.0% | |
| CTGAATCTATTAACCAAAAC+AGG | - | chr5.3:77724046-77724065 | None:intergenic | 30.0% | |
| CTTCAACAACATATCATGAA+AGG | + | chr5.3:77724373-77724392 | MS.gene38287:CDS | 30.0% | |
| CTTCTTTGAATATTTCCATC+AGG | + | chr5.3:77725751-77725770 | MS.gene38287:intron | 30.0% | |
| GAATGATCCACTTAAATTGT+TGG | + | chr5.3:77723563-77723582 | MS.gene38287:intron | 30.0% | |
| GATGTGAAATTAATGCTAGT+TGG | + | chr5.3:77722799-77722818 | MS.gene38287:intron | 30.0% | |
| GCAGGAAATGTCATTATATT+TGG | + | chr5.3:77724142-77724161 | MS.gene38287:CDS | 30.0% | |
| GCTAATTAATCCAAGATTTG+AGG | + | chr5.3:77726562-77726581 | MS.gene38287:intron | 30.0% | |
| GGTCAGACAAATAATCAATA+TGG | - | chr5.3:77724289-77724308 | None:intergenic | 30.0% | |
| GTGATGAATGAATGAATGAA+TGG | + | chr5.3:77722502-77722521 | MS.gene38287:intron | 30.0% | |
| TAATAATAAGATCAGCAAGG+CGG | + | chr5.3:77726025-77726044 | MS.gene38287:CDS | 30.0% | |
| TAATCCACTTGAAATTTGTG+AGG | + | chr5.3:77723340-77723359 | MS.gene38287:intron | 30.0% | |
| TAATGAATTGGGATTGTGAT+TGG | + | chr5.3:77725524-77725543 | MS.gene38287:intron | 30.0% | |
| TAGGAAGAATCATATGAAGA+AGG | + | chr5.3:77722336-77722355 | MS.gene38287:CDS | 30.0% | |
| TCAAACAAGTAGCAGTAAAA+AGG | - | chr5.3:77724789-77724808 | None:intergenic | 30.0% | |
| TCAACAACATATCATGAAAG+GGG | + | chr5.3:77724375-77724394 | MS.gene38287:CDS | 30.0% | |
| TCTATTCAACTGATATAACC+AGG | + | chr5.3:77724314-77724333 | MS.gene38287:intron | 30.0% | |
| TCTTTGAATATTTCCATCAG+GGG | + | chr5.3:77725753-77725772 | MS.gene38287:intron | 30.0% | |
| TGAATGAATGGAAGAATGAT+AGG | + | chr5.3:77722514-77722533 | MS.gene38287:intron | 30.0% | |
| TGGATTAATTAGCAAGTTTG+AGG | - | chr5.3:77726555-77726574 | None:intergenic | 30.0% | |
| TTTACAAGGTTATGTGGTTA+TGG | + | chr5.3:77723472-77723491 | MS.gene38287:intron | 30.0% | |
| TTTGTGTGCTTTACTAATTG+TGG | + | chr5.3:77726376-77726395 | MS.gene38287:intron | 30.0% | |
| ! | AAGAATGATAGGTTTGAAGT+TGG | + | chr5.3:77722525-77722544 | MS.gene38287:intron | 30.0% |
| ! | GTGATTTTATCGTGATTGAT+TGG | + | chr5.3:77723055-77723074 | MS.gene38287:intron | 30.0% |
| ! | TGATTTTCTTTGTGAGTCTA+TGG | + | chr5.3:77722853-77722872 | MS.gene38287:intron | 30.0% |
| !! | ATTCTTTTAGAAACACTGCA+AGG | - | chr5.3:77726614-77726633 | None:intergenic | 30.0% |
| !! | GAAAATGTGGCAATTGATTT+TGG | + | chr5.3:77723666-77723685 | MS.gene38287:intron | 30.0% |
| !! | GAAGTTCTGAAGAAAATGAA+AGG | + | chr5.3:77724579-77724598 | MS.gene38287:intron | 30.0% |
| !! | TATGTTTTTGTGTGTTCACA+TGG | + | chr5.3:77723989-77724008 | MS.gene38287:CDS | 30.0% |
| !! | TTCTTTTAGAAACACTGCAA+GGG | - | chr5.3:77726613-77726632 | None:intergenic | 30.0% |
| !!! | AATTTAAGCTTTTGGGTTGT+TGG | + | chr5.3:77722470-77722489 | MS.gene38287:intron | 30.0% |
| !!! | AGCTTTTGGGTTAAATATTG+TGG | + | chr5.3:77723527-77723546 | MS.gene38287:intron | 30.0% |
| !!! | CTGTTTTGGTTAATAGATTC+AGG | + | chr5.3:77724044-77724063 | MS.gene38287:CDS | 30.0% |
| !!! | CTTTTGGGTTAAATATTGTG+GGG | + | chr5.3:77723529-77723548 | MS.gene38287:intron | 30.0% |
| !!! | GCTTTTGGGTTAAATATTGT+GGG | + | chr5.3:77723528-77723547 | MS.gene38287:intron | 30.0% |
| !!! | TGTGATTTTTTGGGTGTTTA+TGG | + | chr5.3:77722634-77722653 | MS.gene38287:intron | 30.0% |
| !!! | TTTGGGTTGTTTGTTTTGTA+GGG | + | chr5.3:77723292-77723311 | MS.gene38287:intron | 30.0% |
| !!! | TTTTGGGTTGTTTGTTTTGT+AGG | + | chr5.3:77723291-77723310 | MS.gene38287:intron | 30.0% |
| !!! | TTTTGGTTGTTTGTTTTGCA+GGG | + | chr5.3:77723103-77723122 | MS.gene38287:intron | 30.0% |
| !!! | TTTTTGGTTGTTTGTTTTGC+AGG | + | chr5.3:77723102-77723121 | MS.gene38287:intron | 30.0% |
| AAATGAATTATGAACCCTCG+AGG | - | chr5.3:77724691-77724710 | None:intergenic | 35.0% | |
| AATGAAGCACAGACAATCTT+CGG | + | chr5.3:77724993-77725012 | MS.gene38287:intron | 35.0% | |
| ACAAGTTAGAGTATGATCCA+GGG | - | chr5.3:77725719-77725738 | None:intergenic | 35.0% | |
| AGAGAACTTTGTCGAAAATC+AGG | - | chr5.3:77722187-77722206 | None:intergenic | 35.0% | |
| ATACCATCAGCTAAAGACAA+AGG | - | chr5.3:77724919-77724938 | None:intergenic | 35.0% | |
| ATATAAGAAACCTTAGCCTC+AGG | + | chr5.3:77726452-77726471 | MS.gene38287:intron | 35.0% | |
| CAAACCTCACAAATTTCAAG+TGG | - | chr5.3:77723347-77723366 | None:intergenic | 35.0% | |
| CAACTCACGATTCAGAAAAT+AGG | - | chr5.3:77725251-77725270 | None:intergenic | 35.0% | |
| CAATCATTATTGGACATGCA+GGG | + | chr5.3:77726323-77726342 | MS.gene38287:intron | 35.0% | |
| CTACAAACAATTGACATAGG+AGG | + | chr5.3:77726193-77726212 | MS.gene38287:intron | 35.0% | |
| CTGCAAAATGTTAATATGGC+AGG | + | chr5.3:77723870-77723889 | MS.gene38287:intron | 35.0% | |
| CTGCTACAAACAATTGACAT+AGG | + | chr5.3:77726190-77726209 | MS.gene38287:intron | 35.0% | |
| CTTGACACCAACAATTTAAG+TGG | - | chr5.3:77723573-77723592 | None:intergenic | 35.0% | |
| GAAGAAGTTCTTGTGAAGAA+TGG | + | chr5.3:77723926-77723945 | MS.gene38287:CDS | 35.0% | |
| GAAGAATCATATGAAGAAGG+AGG | + | chr5.3:77722339-77722358 | MS.gene38287:CDS | 35.0% | |
| GATGGGATTGTGAATGTTAA+GGG | - | chr5.3:77722019-77722038 | None:intergenic | 35.0% | |
| GGGAGATTATAGACTCATTA+TGG | + | chr5.3:77724395-77724414 | MS.gene38287:CDS | 35.0% | |
| GTGATTCATTAGAGTGTATC+AGG | + | chr5.3:77725473-77725492 | MS.gene38287:intron | 35.0% | |
| TACAAGTTAGAGTATGATCC+AGG | - | chr5.3:77725720-77725739 | None:intergenic | 35.0% | |
| TACCATCAGCTAAAGACAAA+GGG | - | chr5.3:77724918-77724937 | None:intergenic | 35.0% | |
| TACCATGGTAGTTGAATTAC+CGG | - | chr5.3:77725183-77725202 | None:intergenic | 35.0% | |
| TACGAACCTTTCAAACTTTC+AGG | - | chr5.3:77723971-77723990 | None:intergenic | 35.0% | |
| TAGCAGTAAAAAGGGCAAAT+AGG | - | chr5.3:77724780-77724799 | None:intergenic | 35.0% | |
| TCAACTGATATAACCAGGTA+TGG | + | chr5.3:77724319-77724338 | MS.gene38287:intron | 35.0% | |
| TCGAATTAAGATACAACTCG+CGG | + | chr5.3:77725616-77725635 | MS.gene38287:intron | 35.0% | |
| TGATGGGATTGTGAATGTTA+AGG | - | chr5.3:77722020-77722039 | None:intergenic | 35.0% | |
| TTAGTAGCAGCTATAAAGCA+CGG | - | chr5.3:77725144-77725163 | None:intergenic | 35.0% | |
| TTCTTTGTTACAAGAATCCC+AGG | + | chr5.3:77722242-77722261 | MS.gene38287:CDS | 35.0% | |
| TTGAGAAGAGTTAACTAGCA+AGG | + | chr5.3:77724609-77724628 | MS.gene38287:intron | 35.0% | |
| TTGCCAACAAAAAAACTTGC+GGG | - | chr5.3:77724975-77724994 | None:intergenic | 35.0% | |
| TTTATGCTGCTGTTAAAGCT+AGG | + | chr5.3:77722317-77722336 | MS.gene38287:CDS | 35.0% | |
| TTTCGACAAAGTTCTCTTGT+TGG | + | chr5.3:77722190-77722209 | MS.gene38287:CDS | 35.0% | |
| ! | AGGAAGAGTTTCCATTTTCT+TGG | - | chr5.3:77725929-77725948 | None:intergenic | 35.0% |
| ! | AGGGAAGAAATAGAGTATCA+TGG | + | chr5.3:77724064-77724083 | MS.gene38287:CDS | 35.0% |
| ! | ATAGAGTATCATGGTCTACA+AGG | + | chr5.3:77724073-77724092 | MS.gene38287:CDS | 35.0% |
| ! | CTGGCATTTTGCTTATTTGT+GGG | + | chr5.3:77724495-77724514 | MS.gene38287:intron | 35.0% |
| ! | GTTTGTTTCTTTACTAGACC+CGG | + | chr5.3:77723707-77723726 | MS.gene38287:intron | 35.0% |
| ! | TGGAAACCAAAGTTGACTTA+TGG | - | chr5.3:77724848-77724867 | None:intergenic | 35.0% |
| !! | AAGAATTTTGATAACCGAGC+AGG | - | chr5.3:77724213-77724232 | None:intergenic | 35.0% |
| !! | CACTTAAATTGTTGGTGTCA+AGG | + | chr5.3:77723571-77723590 | MS.gene38287:intron | 35.0% |
| !!! | GTGATTTTTTGGTGGTTGAT+TGG | + | chr5.3:77722432-77722451 | MS.gene38287:intron | 35.0% |
| !!! | TCAAGGTTTTTTTGATAGCG+AGG | + | chr5.3:77723588-77723607 | MS.gene38287:intron | 35.0% |
| !!! | TTACCCGCAAGTTTTTTTGT+TGG | + | chr5.3:77724969-77724988 | MS.gene38287:intron | 35.0% |
| !!! | TTTTGGGTTGTTGGTTTTCT+GGG | + | chr5.3:77722479-77722498 | MS.gene38287:intron | 35.0% |
| !!! | TTTTGGGTTGTTTGCTTTGT+GGG | + | chr5.3:77722724-77722743 | MS.gene38287:intron | 35.0% |
| AACCTGTATCTGATCATGTC+AGG | - | chr5.3:77723793-77723812 | None:intergenic | 40.0% | |
| AACGATGGTGTTCTTTCATC+TGG | + | chr5.3:77722127-77722146 | MS.gene38287:CDS | 40.0% | |
| AACTACCATGGTATCACTCA+TGG | + | chr5.3:77725190-77725209 | MS.gene38287:intron | 40.0% | |
| AAGATTCTCTCAATCCTCGA+GGG | + | chr5.3:77724674-77724693 | MS.gene38287:intron | 40.0% | |
| ACGGGACTGAAACATCTAAT+GGG | + | chr5.3:77723752-77723771 | MS.gene38287:CDS | 40.0% | |
| ACTATCAAGTGTGTCAGAGA+CGG | - | chr5.3:77722068-77722087 | None:intergenic | 40.0% | |
| AGGAATGAGAGGAAGATGAT+GGG | - | chr5.3:77722036-77722055 | None:intergenic | 40.0% | |
| ATGAAAGAACACCATCGTTC+TGG | - | chr5.3:77722126-77722145 | None:intergenic | 40.0% | |
| CCAATCATTATTGGACATGC+AGG | + | chr5.3:77726322-77726341 | MS.gene38287:intron | 40.0% | |
| CCTGCATGTCCAATAATGAT+TGG | - | chr5.3:77726325-77726344 | None:intergenic | 40.0% | |
| CTAGAGATCCATTCAGTACA+GGG | - | chr5.3:77725863-77725882 | None:intergenic | 40.0% | |
| GAAGAAAACCCTGTACTGAA+TGG | + | chr5.3:77725852-77725871 | MS.gene38287:CDS | 40.0% | |
| GATGTTGCTGATGTTGAGTT+TGG | + | chr5.3:77722151-77722170 | MS.gene38287:CDS | 40.0% | |
| GCATTTCAAAAAGGGTCTCT+TGG | + | chr5.3:77724746-77724765 | MS.gene38287:intron | 40.0% | |
| GGAACACCTGAAAGTTTGAA+AGG | + | chr5.3:77723962-77723981 | MS.gene38287:CDS | 40.0% | |
| GGGTGTTTATGGTGATTGAT+TGG | + | chr5.3:77722645-77722664 | MS.gene38287:intron | 40.0% | |
| GTGAGTCTATGGTGATTGAT+TGG | + | chr5.3:77722864-77722883 | MS.gene38287:intron | 40.0% | |
| TACCCTTTGTCTTTAGCTGA+TGG | + | chr5.3:77724913-77724932 | MS.gene38287:intron | 40.0% | |
| TACTTCATATCCTGAGGCTA+AGG | - | chr5.3:77726465-77726484 | None:intergenic | 40.0% | |
| TATTGTCGATCATATGTCCC+TGG | + | chr5.3:77725699-77725718 | MS.gene38287:intron | 40.0% | |
| TCAGCTAAAGACAAAGGGTA+CGG | - | chr5.3:77724913-77724932 | None:intergenic | 40.0% | |
| TCTAGAGATCCATTCAGTAC+AGG | - | chr5.3:77725864-77725883 | None:intergenic | 40.0% | |
| TGGTAAGGATAAAACCTGCT+CGG | + | chr5.3:77724196-77724215 | MS.gene38287:intron | 40.0% | |
| TTCCTGACATGATCAGATAC+AGG | + | chr5.3:77723788-77723807 | MS.gene38287:CDS | 40.0% | |
| TTCTTGTGAAGAATGGAGAG+TGG | + | chr5.3:77723933-77723952 | MS.gene38287:CDS | 40.0% | |
| TTGCGGGTAAGTAATGCATA+TGG | - | chr5.3:77724959-77724978 | None:intergenic | 40.0% | |
| ! | GCTGGCATTTTGCTTATTTG+TGG | + | chr5.3:77724494-77724513 | MS.gene38287:intron | 40.0% |
| ! | GTTACAAGAATCCCAGGTTT+TGG | + | chr5.3:77722248-77722267 | MS.gene38287:CDS | 40.0% |
| ! | TTCAAACTTTCAGGTGTTCC+AGG | - | chr5.3:77723962-77723981 | None:intergenic | 40.0% |
| !! | TGATAGGTTTGAAGTTGGTG+AGG | + | chr5.3:77722530-77722549 | MS.gene38287:intron | 40.0% |
| !! | TTTGGGTTGTTTGCTTTGTG+GGG | + | chr5.3:77722725-77722744 | MS.gene38287:intron | 40.0% |
| !!! | CTTTTGGGTTGTTGGTTTTC+TGG | + | chr5.3:77722478-77722497 | MS.gene38287:intron | 40.0% |
| !!! | CTTTTGGGTTGTTTGCTTTG+TGG | + | chr5.3:77722723-77722742 | MS.gene38287:intron | 40.0% |
| !!! | TTTGGGTTGTTGGTTTTCTG+GGG | + | chr5.3:77722480-77722499 | MS.gene38287:intron | 40.0% |
| AACTCAGCAGCTTCAATCCT+AGG | - | chr5.3:77722277-77722296 | None:intergenic | 45.0% | |
| ACAGCAGCATAAAGCAACCT+AGG | - | chr5.3:77722310-77722329 | None:intergenic | 45.0% | |
| ACCCGGTTAACGATATGTGA+GGG | + | chr5.3:77723724-77723743 | MS.gene38287:CDS | 45.0% | |
| ACCCTCACATATCGTTAACC+GGG | - | chr5.3:77723728-77723747 | None:intergenic | 45.0% | |
| ACGATATGTGAGGGTCATGA+CGG | + | chr5.3:77723733-77723752 | MS.gene38287:CDS | 45.0% | |
| AGCAATAACGGTACATCCTC+CGG | - | chr5.3:77724355-77724374 | None:intergenic | 45.0% | |
| AGCATGAATGGAGAAGTCAC+TGG | + | chr5.3:77724169-77724188 | MS.gene38287:CDS | 45.0% | |
| ATCAGCTGAAAGCTTTGCCT+CGG | - | chr5.3:77726006-77726025 | None:intergenic | 45.0% | |
| ATTGGGGGACATAAGTATGC+AGG | + | chr5.3:77724124-77724143 | MS.gene38287:CDS | 45.0% | |
| ATTTCCATCAGGGGTCAGAT+GGG | + | chr5.3:77725762-77725781 | MS.gene38287:intron | 45.0% | |
| CAAGATTCTCTCAATCCTCG+AGG | + | chr5.3:77724673-77724692 | MS.gene38287:intron | 45.0% | |
| CACAGACAATCTTCGGAGTA+GGG | + | chr5.3:77725000-77725019 | MS.gene38287:intron | 45.0% | |
| CACCGGTAATTCAACTACCA+TGG | + | chr5.3:77725178-77725197 | MS.gene38287:intron | 45.0% | |
| CAGGTATGGATATGTTGCTC+CGG | + | chr5.3:77724333-77724352 | MS.gene38287:intron | 45.0% | |
| CATCCTCTAAATGACACACC+TGG | + | chr5.3:77724459-77724478 | MS.gene38287:intron | 45.0% | |
| CGGGACTGAAACATCTAATG+GGG | + | chr5.3:77723753-77723772 | MS.gene38287:CDS | 45.0% | |
| GACCCTCACATATCGTTAAC+CGG | - | chr5.3:77723729-77723748 | None:intergenic | 45.0% | |
| GACGGGACTGAAACATCTAA+TGG | + | chr5.3:77723751-77723770 | MS.gene38287:CDS | 45.0% | |
| GAGGAATGAGAGGAAGATGA+TGG | - | chr5.3:77722037-77722056 | None:intergenic | 45.0% | |
| GATGACCATGAGTGATACCA+TGG | - | chr5.3:77725198-77725217 | None:intergenic | 45.0% | |
| GGTTTCGATCTATGACAGCA+TGG | + | chr5.3:77726087-77726106 | MS.gene38287:CDS | 45.0% | |
| TAAGATACAACTCGCGGCAT+CGG | + | chr5.3:77725622-77725641 | MS.gene38287:intron | 45.0% | |
| TAATAAGATCAGCAAGGCGG+CGG | + | chr5.3:77726028-77726047 | MS.gene38287:CDS | 45.0% | |
| TATTTCCATCAGGGGTCAGA+TGG | + | chr5.3:77725761-77725780 | MS.gene38287:intron | 45.0% | |
| TCTATGACAGCATGGCTTGA+CGG | + | chr5.3:77726095-77726114 | MS.gene38287:CDS | 45.0% | |
| TCTGGAAGTTTCCAGAACGA+TGG | + | chr5.3:77722112-77722131 | MS.gene38287:CDS | 45.0% | |
| TGTGTGTGCACCTCAAATCT+TGG | - | chr5.3:77726575-77726594 | None:intergenic | 45.0% | |
| TGTTCAGGCAACAACTGTCA+TGG | + | chr5.3:77724887-77724906 | MS.gene38287:intron | 45.0% | |
| ! | CTCTTCCTTTTGTCAGAGTC+AGG | + | chr5.3:77725941-77725960 | MS.gene38287:CDS | 45.0% |
| ! | TGGTTGGCTACACCAAGTTT+AGG | + | chr5.3:77725448-77725467 | MS.gene38287:intron | 45.0% |
| ! | TGTTGTCTGTGCTGCTGTAT+CGG | + | chr5.3:77726151-77726170 | MS.gene38287:CDS | 45.0% |
| !! | AAACTTCCAGAAGCGCTTCT+TGG | - | chr5.3:77722103-77722122 | None:intergenic | 45.0% |
| !! | AACTGCTGGTGTCATTGCAA+GGG | - | chr5.3:77726773-77726792 | None:intergenic | 45.0% |
| !! | AACTTCCAGAAGCGCTTCTT+GGG | - | chr5.3:77722102-77722121 | None:intergenic | 45.0% |
| AAAATGCCAGCAGCAGAGAG+CGG | - | chr5.3:77724485-77724504 | None:intergenic | 50.0% | |
| AACCGCTTCACCTGCACTAA+GGG | + | chr5.3:77726729-77726748 | MS.gene38287:CDS | 50.0% | |
| AAGAATGGAGAGTGGCTACC+TGG | + | chr5.3:77723941-77723960 | MS.gene38287:CDS | 50.0% | |
| AATCCTAGGAGGCCAAAACC+TGG | - | chr5.3:77722263-77722282 | None:intergenic | 50.0% | |
| ACCATTCCTATGTGCTCCAG+CGG | + | chr5.3:77726659-77726678 | MS.gene38287:intron | 50.0% | |
| AGCAGCTATAAAGCACGGAC+AGG | - | chr5.3:77725139-77725158 | None:intergenic | 50.0% | |
| AGCAGCTCACTCCATTTGGT+TGG | - | chr5.3:77725905-77725924 | None:intergenic | 50.0% | |
| AGGCTTCTGCTGAGTTGCAT+AGG | + | chr5.3:77725822-77725841 | MS.gene38287:CDS | 50.0% | |
| AGTGTGTCAGAGACGGTGAT+TGG | - | chr5.3:77722061-77722080 | None:intergenic | 50.0% | |
| ATCACGTGATCGCAGATGTG+GGG | + | chr5.3:77724012-77724031 | MS.gene38287:CDS | 50.0% | |
| ATCCTAGGAGGCCAAAACCT+GGG | - | chr5.3:77722262-77722281 | None:intergenic | 50.0% | |
| ATGGAGAAGTCACTGGACAC+TGG | + | chr5.3:77724176-77724195 | MS.gene38287:CDS | 50.0% | |
| CGATATGTGAGGGTCATGAC+GGG | + | chr5.3:77723734-77723753 | MS.gene38287:CDS | 50.0% | |
| CGGAGCAACATATCCATACC+TGG | - | chr5.3:77724335-77724354 | None:intergenic | 50.0% | |
| CGGTTTCTCGAATCAACAGC+GGG | + | chr5.3:77726048-77726067 | MS.gene38287:CDS | 50.0% | |
| CTGAGTTTGATCGCTTGCCT+AGG | + | chr5.3:77722290-77722309 | MS.gene38287:CDS | 50.0% | |
| GAAGTCACTGGACACTGGTA+AGG | + | chr5.3:77724181-77724200 | MS.gene38287:intron | 50.0% | |
| GACCCGGTTAACGATATGTG+AGG | + | chr5.3:77723723-77723742 | MS.gene38287:intron | 50.0% | |
| GAGCACATAGGAATGGTGGT+GGG | - | chr5.3:77726656-77726675 | None:intergenic | 50.0% | |
| GATCACGTGATCGCAGATGT+GGG | + | chr5.3:77724011-77724030 | MS.gene38287:CDS | 50.0% | |
| GCACAGACAATCTTCGGAGT+AGG | + | chr5.3:77724999-77725018 | MS.gene38287:intron | 50.0% | |
| GCAGCTATAAAGCACGGACA+GGG | - | chr5.3:77725138-77725157 | None:intergenic | 50.0% | |
| GCGGTTTCTCGAATCAACAG+CGG | + | chr5.3:77726047-77726066 | MS.gene38287:CDS | 50.0% | |
| GCTTCTGCTGAGTTGCATAG+GGG | + | chr5.3:77725824-77725843 | MS.gene38287:CDS | 50.0% | |
| GGCTTCTGCTGAGTTGCATA+GGG | + | chr5.3:77725823-77725842 | MS.gene38287:CDS | 50.0% | |
| GGTGATTGGTGAGGAATGAG+AGG | - | chr5.3:77722047-77722066 | None:intergenic | 50.0% | |
| GTATGGATATGTTGCTCCGG+AGG | + | chr5.3:77724336-77724355 | MS.gene38287:CDS | 50.0% | |
| GTGAGCTGCTGCCAAGAAAA+TGG | + | chr5.3:77725915-77725934 | MS.gene38287:CDS | 50.0% | |
| TAATCCCATCTGACCCCTGA+TGG | - | chr5.3:77725769-77725788 | None:intergenic | 50.0% | |
| TCAAACTCCGCACTCTCACA+AGG | + | chr5.3:77726687-77726706 | MS.gene38287:CDS | 50.0% | |
| TCAGCAGCTTCAATCCTAGG+AGG | - | chr5.3:77722274-77722293 | None:intergenic | 50.0% | |
| TCTCGAATCAACAGCGGGAA+AGG | + | chr5.3:77726053-77726072 | MS.gene38287:CDS | 50.0% | |
| TGACGCCTGACTCTGACAAA+AGG | - | chr5.3:77725949-77725968 | None:intergenic | 50.0% | |
| TGGACATGCAGGGAACGAAT+GGG | + | chr5.3:77726333-77726352 | MS.gene38287:intron | 50.0% | |
| TTGGACATGCAGGGAACGAA+TGG | + | chr5.3:77726332-77726351 | MS.gene38287:intron | 50.0% | |
| ! | TGGGGTTTGTGGACCTGTTT+TGG | + | chr5.3:77724030-77724049 | MS.gene38287:CDS | 50.0% |
| !! | GAACTGCTGGTGTCATTGCA+AGG | - | chr5.3:77726774-77726793 | None:intergenic | 50.0% |
| !! | TGGTGTCGACATGTCGTGTT+CGG | + | chr5.3:77725109-77725128 | MS.gene38287:intron | 50.0% |
| ACGAGCTGCTGCCAACCAAA+TGG | + | chr5.3:77725891-77725910 | MS.gene38287:CDS | 55.0% | |
| CAACCGCTTCACCTGCACTA+AGG | + | chr5.3:77726728-77726747 | MS.gene38287:CDS | 55.0% | |
| GATCGCAGATGTGGGGTTTG+TGG | + | chr5.3:77724019-77724038 | MS.gene38287:CDS | 55.0% | |
| GCTGGAGCACATAGGAATGG+TGG | - | chr5.3:77726660-77726679 | None:intergenic | 55.0% | |
| GGAGCACATAGGAATGGTGG+TGG | - | chr5.3:77726657-77726676 | None:intergenic | 55.0% | |
| GGATCACGTGATCGCAGATG+TGG | + | chr5.3:77724010-77724029 | MS.gene38287:CDS | 55.0% | |
| GGTGTCTGACACCGACACAT+AGG | + | chr5.3:77725046-77725065 | MS.gene38287:intron | 55.0% | |
| GTCAGAGACGGTGATTGGTG+AGG | - | chr5.3:77722056-77722075 | None:intergenic | 55.0% | |
| TGCCTCGGTCTCGATGACAT+CGG | - | chr5.3:77725991-77726010 | None:intergenic | 55.0% | |
| TGGCAGCAGCTCACTCCATT+TGG | - | chr5.3:77725909-77725928 | None:intergenic | 55.0% | |
| TTAGCCCGTGCTCGCACATT+GGG | + | chr5.3:77724107-77724126 | MS.gene38287:CDS | 55.0% | |
| TTGTCAGAGTCAGGCGTCAG+TGG | + | chr5.3:77725950-77725969 | MS.gene38287:CDS | 55.0% | |
| ! | ATCTTCGGAGTAGGGTGTCC+CGG | + | chr5.3:77725008-77725027 | MS.gene38287:intron | 55.0% |
| !! | ATCCCAGGTTTTGGCCTCCT+AGG | + | chr5.3:77722257-77722276 | MS.gene38287:CDS | 55.0% |
| !! | CACATAGGAATGGTGGTGGG+TGG | - | chr5.3:77726653-77726672 | None:intergenic | 55.0% |
| !! | CGGCCAGGTGTGTCATTTAG+AGG | - | chr5.3:77724465-77724484 | None:intergenic | 55.0% |
| !! | TCCAGAAGCGCTTCTTGGGT+CGG | - | chr5.3:77722098-77722117 | None:intergenic | 55.0% |
| AAGCGCTTCTTGGGTCGGTG+AGG | - | chr5.3:77722093-77722112 | None:intergenic | 60.0% | |
| AAGCTGCCGCTGGAGCACAT+AGG | - | chr5.3:77726668-77726687 | None:intergenic | 60.0% | |
| ACTGCAGTCGCCCTTAGTGC+AGG | - | chr5.3:77726742-77726761 | None:intergenic | 60.0% | |
| CAGTTCAGCTCCTGCAACGC+TGG | + | chr5.3:77726788-77726807 | MS.gene38287:CDS | 60.0% | |
| CGCCCTTAGTGCAGGTGAAG+CGG | - | chr5.3:77726734-77726753 | None:intergenic | 60.0% | |
| CGTTGCAGGAGCTGAACTGC+TGG | - | chr5.3:77726787-77726806 | None:intergenic | 60.0% | |
| CTCCGATGTCATCGAGACCG+AGG | + | chr5.3:77725986-77726005 | MS.gene38287:CDS | 60.0% | |
| GACAGCATGGCTTGACGGCT+GGG | + | chr5.3:77726100-77726119 | MS.gene38287:CDS | 60.0% | |
| GCCGCTGGAGCACATAGGAA+TGG | - | chr5.3:77726663-77726682 | None:intergenic | 60.0% | |
| GCGGGAAAGGAGCTTCATGC+AGG | + | chr5.3:77726066-77726085 | MS.gene38287:CDS | 60.0% | |
| GTTAGCCCGTGCTCGCACAT+TGG | + | chr5.3:77724106-77724125 | MS.gene38287:CDS | 60.0% | |
| TAGCCCGTGCTCGCACATTG+GGG | + | chr5.3:77724108-77724127 | MS.gene38287:CDS | 60.0% | |
| TGACAGCATGGCTTGACGGC+TGG | + | chr5.3:77726099-77726118 | MS.gene38287:CDS | 60.0% | |
| TGCACTAAGGGCGACTGCAG+TGG | + | chr5.3:77726741-77726760 | MS.gene38287:CDS | 60.0% | |
| TGTCCCCCAATGTGCGAGCA+CGG | - | chr5.3:77724115-77724134 | None:intergenic | 60.0% | |
| ! | TGGGCAGCCTTGTGAGAGTG+CGG | - | chr5.3:77726697-77726716 | None:intergenic | 60.0% |
| !! | ACCGACCCAAGAAGCGCTTC+TGG | + | chr5.3:77722094-77722113 | MS.gene38287:CDS | 60.0% |
| AAGCGGTTGCCGACGGCACA+TGG | - | chr5.3:77726717-77726736 | None:intergenic | 65.0% | |
| ACCGACGCGTGTCCAACACC+GGG | - | chr5.3:77725029-77725048 | None:intergenic | 65.0% | |
| AGCCCGTGCTCGCACATTGG+GGG | + | chr5.3:77724109-77724128 | MS.gene38287:CDS | 65.0% | |
| AGCGGTTGCCGACGGCACAT+GGG | - | chr5.3:77726716-77726735 | None:intergenic | 65.0% | |
| CAAGGCTGCCCATGTGCCGT+CGG | + | chr5.3:77726705-77726724 | MS.gene38287:CDS | 65.0% | |
| CACCGACGCGTGTCCAACAC+CGG | - | chr5.3:77725030-77725049 | None:intergenic | 65.0% | |
| CGCTGGCACTGTGTGCATCG+TGG | + | chr5.3:77726805-77726824 | MS.gene38287:CDS | 65.0% | |
| GCACACAGTGCCAGCGTTGC+AGG | - | chr5.3:77726801-77726820 | None:intergenic | 65.0% | |
| GCAGGTGAAGCGGTTGCCGA+CGG | - | chr5.3:77726724-77726743 | None:intergenic | 65.0% | |
| GTCCCCCAATGTGCGAGCAC+GGG | - | chr5.3:77724114-77724133 | None:intergenic | 65.0% | |
| ! | GCGGAGTTTGAAGCTGCCGC+TGG | - | chr5.3:77726678-77726697 | None:intergenic | 65.0% |
| ! | GGAGTAGGGTGTCCCGGTGT+TGG | + | chr5.3:77725014-77725033 | MS.gene38287:intron | 65.0% |
| ! | TCCCGGTGTTGGACACGCGT+CGG | + | chr5.3:77725025-77725044 | MS.gene38287:intron | 65.0% |
| ACCTGGCCGCTCTCTGCTGC+TGG | + | chr5.3:77724476-77724495 | MS.gene38287:intron | 70.0% | |
| GCCAGCAGCAGAGAGCGGCC+AGG | - | chr5.3:77724480-77724499 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 77721983 | 77726864 | 77721983 | ID=MS.gene38287 |
| chr5.3 | mRNA | 77721983 | 77726864 | 77721983 | ID=MS.gene38287.t1;Parent=MS.gene38287 |
| chr5.3 | exon | 77721983 | 77722360 | 77721983 | ID=MS.gene38287.t1.exon1;Parent=MS.gene38287.t1 |
| chr5.3 | CDS | 77721983 | 77722360 | 77721983 | ID=cds.MS.gene38287.t1;Parent=MS.gene38287.t1 |
| chr5.3 | exon | 77723724 | 77723809 | 77723724 | ID=MS.gene38287.t1.exon2;Parent=MS.gene38287.t1 |
| chr5.3 | CDS | 77723724 | 77723809 | 77723724 | ID=cds.MS.gene38287.t1;Parent=MS.gene38287.t1 |
| chr5.3 | exon | 77723892 | 77724197 | 77723892 | ID=MS.gene38287.t1.exon3;Parent=MS.gene38287.t1 |
| chr5.3 | CDS | 77723892 | 77724197 | 77723892 | ID=cds.MS.gene38287.t1;Parent=MS.gene38287.t1 |
| chr5.3 | exon | 77724336 | 77724419 | 77724336 | ID=MS.gene38287.t1.exon4;Parent=MS.gene38287.t1 |
| chr5.3 | CDS | 77724336 | 77724419 | 77724336 | ID=cds.MS.gene38287.t1;Parent=MS.gene38287.t1 |
| chr5.3 | exon | 77725773 | 77726172 | 77725773 | ID=MS.gene38287.t1.exon5;Parent=MS.gene38287.t1 |
| chr5.3 | CDS | 77725773 | 77726172 | 77725773 | ID=cds.MS.gene38287.t1;Parent=MS.gene38287.t1 |
| chr5.3 | exon | 77726679 | 77726864 | 77726679 | ID=MS.gene38287.t1.exon6;Parent=MS.gene38287.t1 |
| chr5.3 | CDS | 77726679 | 77726864 | 77726679 | ID=cds.MS.gene38287.t1;Parent=MS.gene38287.t1 |
| Gene Sequence |
| Protein sequence |
