AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38513

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38513.t1 MTR_3g466180 96.980 298 7 1 1 296 26 323 0.0 588
MS.gene38513.t1 MTR_7g072510 68.456 298 92 1 1 296 15 312 1.55e-148 419
MS.gene38513.t1 MTR_7g072480 66.330 297 98 1 2 296 20 316 5.88e-141 400
MS.gene38513.t1 MTR_4g029200 60.000 295 116 1 4 296 44 338 8.55e-136 388
MS.gene38513.t1 MTR_3g094650 62.876 299 107 2 2 296 24 322 6.86e-135 385
MS.gene38513.t1 MTR_4g029190 61.538 299 110 3 3 296 42 340 1.52e-134 385
MS.gene38513.t1 MTR_3g072190 60.884 294 113 1 5 296 25 318 3.56e-133 380
MS.gene38513.t1 MTR_5g083860 61.279 297 111 2 4 296 29 325 7.01e-131 375
MS.gene38513.t1 MTR_3g094670 63.636 297 104 2 4 296 26 322 9.68e-131 374
MS.gene38513.t1 MTR_2g084080 61.356 295 112 1 4 296 23 317 3.62e-129 370
MS.gene38513.t1 MTR_5g074970 60.201 299 113 3 4 296 28 326 2.84e-127 365
MS.gene38513.t1 MTR_3g466200 59.532 299 116 3 3 296 22 320 8.88e-127 364
MS.gene38513.t1 MTR_2g084020 60.606 297 114 2 3 296 22 318 1.37e-126 363
MS.gene38513.t1 MTR_2g084110 59.459 296 118 1 3 296 22 317 3.43e-126 362
MS.gene38513.t1 MTR_4g083710 61.000 300 110 4 4 296 25 324 1.73e-125 361
MS.gene38513.t1 MTR_1g115900 60.535 299 112 4 3 296 24 321 3.07e-125 360
MS.gene38513.t1 MTR_7g026990 61.017 295 111 3 5 296 29 322 3.43e-125 360
MS.gene38513.t1 MTR_3g094630 63.636 297 104 2 4 296 26 322 5.72e-125 360
MS.gene38513.t1 MTR_2g084010 59.596 297 117 2 3 296 22 318 4.25e-124 357
MS.gene38513.t1 MTR_4g029170 57.288 295 122 3 6 296 27 321 9.42e-122 351
MS.gene38513.t1 MTR_2g084090 57.576 297 123 2 3 296 22 318 4.40e-119 345
MS.gene38513.t1 MTR_2g084000 56.040 298 128 2 2 296 22 319 1.28e-118 343
MS.gene38513.t1 MTR_4g074995 60.000 300 100 5 4 296 22 308 2.16e-118 342
MS.gene38513.t1 MTR_4g029180 56.164 292 124 3 9 296 30 321 6.55e-118 342
MS.gene38513.t1 MTR_3g467600 55.150 301 128 4 3 296 24 324 3.73e-114 332
MS.gene38513.t1 MTR_5g074860 54.000 300 130 5 3 295 26 324 1.18e-112 328
MS.gene38513.t1 MTR_4g074990 55.853 299 111 4 4 296 22 305 1.35e-111 325
MS.gene38513.t1 MTR_5g074740 54.000 300 130 5 4 296 23 321 1.51e-111 325
MS.gene38513.t1 MTR_5g074760 53.333 300 132 5 4 296 23 321 1.29e-110 323
MS.gene38513.t1 MTR_5g074710 53.000 300 133 5 4 296 23 321 4.69e-110 322
MS.gene38513.t1 MTR_3g072190 60.729 247 97 0 50 296 5 251 1.33e-109 318
MS.gene38513.t1 MTR_4g074980 54.730 296 107 5 4 296 23 294 3.46e-105 308
MS.gene38513.t1 MTR_5g021060 49.169 301 143 3 6 296 30 330 2.40e-102 302
MS.gene38513.t1 MTR_8g076820 48.197 305 148 3 2 296 26 330 2.82e-101 300
MS.gene38513.t1 MTR_1g054205 49.508 305 142 4 4 296 22 326 3.99e-101 299
MS.gene38513.t1 MTR_4g122640 50.836 299 139 3 6 296 38 336 6.58e-101 299
MS.gene38513.t1 MTR_4g125940 49.026 308 142 4 2 296 24 329 1.00e-99 296
MS.gene38513.t1 MTR_5g017850 49.020 306 145 4 1 296 22 326 2.12e-98 292
MS.gene38513.t1 MTR_2g040000 48.220 309 144 4 2 296 25 331 3.18e-97 290
MS.gene38513.t1 MTR_5g017860 48.525 305 146 4 2 296 23 326 2.24e-96 287
MS.gene38513.t1 MTR_5g014100 49.032 310 141 4 3 296 23 331 2.33e-94 282
MS.gene38513.t1 MTR_4g074980 60.606 231 85 3 4 228 23 253 5.57e-94 278
MS.gene38513.t1 MTR_2g029830 47.368 304 149 3 4 296 26 329 1.68e-93 281
MS.gene38513.t1 MTR_7g093370 46.230 305 152 4 4 296 67 371 3.77e-93 280
MS.gene38513.t1 MTR_1g022970 46.405 306 153 3 2 296 42 347 4.62e-93 279
MS.gene38513.t1 MTR_2g029560 45.395 304 155 3 4 296 22 325 2.61e-92 277
MS.gene38513.t1 MTR_5g049280 44.805 308 156 5 3 296 30 337 1.27e-91 275
MS.gene38513.t1 MTR_2g029800 46.382 304 152 3 4 296 27 330 2.73e-91 275
MS.gene38513.t1 MTR_2g029815 46.382 304 152 3 4 296 27 330 1.01e-90 273
MS.gene38513.t1 MTR_2g029750 45.902 305 154 3 3 296 26 330 2.55e-90 273
MS.gene38513.t1 MTR_4g125940 50.545 275 121 4 35 296 2 274 4.32e-90 269
MS.gene38513.t1 MTR_2g028980 45.574 305 155 3 3 296 26 330 6.14e-90 272
MS.gene38513.t1 MTR_2g029740 45.574 305 155 3 3 296 26 330 1.26e-89 271
MS.gene38513.t1 MTR_2g029860 44.918 305 157 3 3 296 26 330 3.25e-89 270
MS.gene38513.t1 MTR_2g029820 45.902 305 154 3 3 296 26 330 4.99e-88 267
MS.gene38513.t1 MTR_4g030890 46.205 303 151 4 3 296 97 396 9.32e-88 268
MS.gene38513.t1 MTR_5g074860 46.000 300 115 6 3 295 26 285 2.13e-86 260
MS.gene38513.t1 MTR_4g031140 44.224 303 157 4 3 296 25 324 4.98e-86 261
MS.gene38513.t1 MTR_2g029850 44.262 305 159 3 3 296 26 330 5.55e-84 256
MS.gene38513.t1 MTR_2g029910 43.464 306 161 4 3 296 27 332 6.17e-84 256
MS.gene38513.t1 MTR_1g077000 45.238 294 153 6 6 296 39 327 6.92e-84 255
MS.gene38513.t1 MTR_2g029730 43.421 304 161 3 4 296 23 326 8.88e-84 256
MS.gene38513.t1 MTR_0155s0040 43.098 297 161 6 3 296 24 315 3.66e-80 245
MS.gene38513.t1 MTR_3g092990 42.574 303 164 3 4 296 24 326 1.02e-76 237
MS.gene38513.t1 MTR_1g038680 43.000 300 158 5 10 296 33 332 2.16e-76 236
MS.gene38513.t1 MTR_2g029830 46.875 256 127 2 50 296 6 261 6.76e-76 233
MS.gene38513.t1 MTR_7g086820 42.000 300 162 5 4 296 18 312 1.00e-75 234
MS.gene38513.t1 MTR_1g101830 40.328 305 169 5 1 296 22 322 1.28e-75 234
MS.gene38513.t1 MTR_2g088770 40.789 304 167 6 4 296 24 325 2.76e-75 233
MS.gene38513.t1 MTR_2g008710 43.000 300 153 6 10 296 31 325 4.46e-75 233
MS.gene38513.t1 MTR_8g075100 43.046 302 153 8 6 296 26 319 1.33e-73 229
MS.gene38513.t1 MTR_4g046713 38.944 303 174 4 4 296 25 326 3.89e-73 228
MS.gene38513.t1 MTR_1g086320 42.997 307 162 4 3 296 27 333 1.16e-72 227
MS.gene38513.t1 MTR_4g114210 41.748 309 161 6 2 296 17 320 1.48e-72 226
MS.gene38513.t1 MTR_7g107520 40.667 300 165 5 6 296 25 320 2.07e-72 226
MS.gene38513.t1 MTR_7g029030 40.134 299 170 5 5 296 24 320 7.22e-71 222
MS.gene38513.t1 MTR_1g086490 42.675 314 160 5 3 296 27 340 1.92e-70 221
MS.gene38513.t1 MTR_1g025980 40.924 303 165 5 2 295 20 317 2.63e-70 220
MS.gene38513.t1 MTR_7g086870 40.203 296 166 6 6 296 22 311 5.77e-70 219
MS.gene38513.t1 MTR_5g022870 40.924 303 158 9 6 296 23 316 1.08e-69 219
MS.gene38513.t1 MTR_6g027440 39.333 300 171 6 4 296 19 314 5.53e-69 217
MS.gene38513.t1 MTR_1g090760 39.869 306 172 5 3 296 25 330 3.84e-68 215
MS.gene38513.t1 MTR_4g133800 40.878 296 157 7 11 296 46 333 8.69e-68 214
MS.gene38513.t1 MTR_3g092990 40.532 301 162 3 4 296 24 315 2.11e-67 213
MS.gene38513.t1 MTR_2g067440 38.298 329 162 7 6 295 60 386 2.27e-67 215
MS.gene38513.t1 MTR_2g437770 40.199 301 161 8 6 296 50 341 2.70e-67 213
MS.gene38513.t1 MTR_6g043280 40.067 297 167 7 6 296 41 332 2.70e-66 211
MS.gene38513.t1 MTR_8g062780 38.762 307 177 4 1 296 18 324 6.18e-66 209
MS.gene38513.t1 MTR_2g077990 38.066 331 163 7 6 295 76 405 6.67e-65 209
MS.gene38513.t1 MTR_6g043460 39.726 292 168 6 6 292 36 324 7.26e-65 207
MS.gene38513.t1 MTR_2g078610 37.160 331 166 7 6 295 76 405 7.74e-65 209
MS.gene38513.t1 MTR_2g008160 40.065 307 167 7 3 296 21 323 1.19e-64 206
MS.gene38513.t1 MTR_0286s0010 39.016 305 174 5 3 296 31 334 3.10e-64 205
MS.gene38513.t1 MTR_6g008075 39.016 305 174 5 3 296 31 334 3.10e-64 205
MS.gene38513.t1 MTR_3g072210 52.432 185 86 2 114 296 54 238 1.91e-63 200
MS.gene38513.t1 MTR_7g072490 47.807 228 65 2 50 277 2 175 4.35e-62 196
MS.gene38513.t1 MTR_5g074700 46.188 223 104 5 77 296 5 214 2.04e-61 194
MS.gene38513.t1 MTR_0147s0010 36.909 317 161 6 6 295 77 381 7.11e-61 198
MS.gene38513.t1 MTR_2g078280 37.421 318 157 7 6 282 76 392 9.20e-60 195
MS.gene38513.t1 MTR_5g016010 36.213 301 180 4 4 292 25 325 1.46e-59 193
MS.gene38513.t1 MTR_4g087965 36.721 305 179 6 2 292 38 342 1.50e-59 193
MS.gene38513.t1 MTR_2g099175 36.928 306 174 7 5 296 35 335 2.73e-59 192
MS.gene38513.t1 MTR_3g105790 37.255 306 177 4 2 296 21 322 4.09e-59 192
MS.gene38513.t1 MTR_1g009750 35.948 306 183 5 3 296 24 328 1.79e-58 190
MS.gene38513.t1 MTR_4g095450 36.824 296 180 4 4 292 25 320 3.11e-58 189
MS.gene38513.t1 MTR_4g132490 34.551 301 187 4 5 296 28 327 5.50e-58 189
MS.gene38513.t1 MTR_5g033470 36.977 311 176 8 3 296 70 377 9.83e-58 190
MS.gene38513.t1 MTR_2g008730 37.248 298 149 5 10 296 31 301 1.27e-56 184
MS.gene38513.t1 MTR_2g067450 37.785 307 170 9 4 295 9 309 3.59e-56 184
MS.gene38513.t1 MTR_6g043240 36.149 296 178 7 6 296 42 331 2.64e-55 182
MS.gene38513.t1 MTR_4g127670 34.211 304 185 5 5 296 23 323 3.84e-55 181
MS.gene38513.t1 MTR_1g066380 34.000 300 190 4 4 296 25 323 3.96e-55 181
MS.gene38513.t1 MTR_1g066710 34.098 305 185 5 3 296 24 323 2.70e-53 177
MS.gene38513.t1 MTR_1g066640 33.555 301 192 4 3 296 24 323 7.48e-53 176
MS.gene38513.t1 MTR_2g008160 36.877 301 150 7 3 296 21 288 4.86e-52 172
MS.gene38513.t1 MTR_1g066680 33.443 305 190 6 1 296 22 322 1.07e-49 167
MS.gene38513.t1 MTR_4g132110 32.993 294 189 4 6 292 32 324 1.23e-49 167
MS.gene38513.t1 MTR_1g009750 33.553 304 176 6 3 296 24 311 3.85e-49 166
MS.gene38513.t1 MTR_3g072260 68.182 110 33 1 5 112 25 134 1.43e-47 156
MS.gene38513.t1 MTR_4g132110 32.441 299 189 5 6 292 32 329 3.65e-47 161
MS.gene38513.t1 MTR_1g066380 33.865 251 160 3 51 296 6 255 6.23e-45 153
MS.gene38513.t1 MTR_3g105790 36.250 240 143 2 66 296 8 246 3.69e-42 145
MS.gene38513.t1 MTR_2g008160 46.746 169 84 4 3 169 21 185 1.37e-41 143
MS.gene38513.t1 MTR_2g029880 37.368 190 100 4 116 296 9 188 9.47e-39 135
MS.gene38513.t1 MTR_2g078560 31.532 222 114 4 109 292 95 316 8.72e-29 112
MS.gene38513.t1 MTR_7g086790 36.757 185 102 4 51 235 17 186 4.89e-28 107
MS.gene38513.t1 MTR_2g077980 30.545 275 144 9 66 295 11 283 8.80e-28 109
MS.gene38513.t1 MTR_5g074770 45.133 113 54 3 185 295 2 108 5.59e-26 99.4
MS.gene38513.t1 MTR_3g462850 41.135 141 71 5 168 296 9 149 1.79e-24 96.7
MS.gene38513.t1 MTR_5g058120 34.416 154 97 2 139 292 6 155 1.01e-23 97.4
MS.gene38513.t1 MTR_4g031040 33.735 166 73 3 65 230 3 131 1.15e-21 89.0
MS.gene38513.t1 MTR_6g048160 65.714 70 18 3 45 112 22 87 3.80e-20 83.6
MS.gene38513.t1 MTR_3g107060 30.078 256 114 9 38 277 106 312 2.97e-19 86.7
MS.gene38513.t1 MTR_1g089005 43.220 118 58 2 6 115 15 131 3.28e-19 82.8
MS.gene38513.t1 MTR_4g114220 51.136 88 31 3 26 111 23 100 4.00e-19 82.4
MS.gene38513.t1 MTR_1g098320 44.286 70 39 0 223 292 51 120 2.92e-15 71.6
MS.gene38513.t1 MTR_2g029930 39.604 101 31 3 3 87 16 102 5.06e-15 70.1
MS.gene38513.t1 MTR_3g088160 26.190 252 155 6 40 278 121 354 2.27e-14 73.2
MS.gene38513.t1 MTR_3g088160 26.190 252 155 6 40 278 121 354 2.76e-14 73.2
MS.gene38513.t1 MTR_6g071110 39.773 88 41 2 75 162 84 159 6.31e-13 65.9
MS.gene38513.t1 MTR_7g086785 41.892 74 42 1 48 121 2 74 1.06e-12 64.7
MS.gene38513.t1 MTR_7g086810 31.405 121 59 2 1 121 1 97 2.24e-12 65.9
MS.gene38513.t1 MTR_0147s0040 41.096 73 43 0 223 295 10 82 1.97e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38513.t1 AT5G05340 62.000 300 110 2 1 296 25 324 6.71e-134 382
MS.gene38513.t1 AT5G58400 58.054 298 120 4 4 296 28 325 1.74e-118 343
MS.gene38513.t1 AT5G58390 56.522 299 125 3 3 296 18 316 5.50e-115 334
MS.gene38513.t1 AT1G14550 53.156 301 136 4 1 296 21 321 1.21e-109 321
MS.gene38513.t1 AT1G14540 53.199 297 135 3 4 296 19 315 6.56e-108 316
MS.gene38513.t1 AT5G06720 51.475 305 137 3 3 296 29 333 9.89e-108 316
MS.gene38513.t1 AT4G36430 47.351 302 149 3 5 296 29 330 6.51e-103 304
MS.gene38513.t1 AT2G18150 47.475 297 146 3 10 296 40 336 3.76e-102 302
MS.gene38513.t1 AT2G18140 47.176 301 149 3 6 296 35 335 2.67e-101 300
MS.gene38513.t1 AT5G06730 47.541 305 149 3 3 296 30 334 9.24e-98 292
MS.gene38513.t1 AT3G50990 47.525 303 149 3 4 296 39 341 9.78e-98 291
MS.gene38513.t1 AT5G66390 47.508 301 148 3 6 296 33 333 1.05e-97 291
MS.gene38513.t1 AT1G44970 48.675 302 144 3 6 296 45 346 1.37e-96 288
MS.gene38513.t1 AT4G08770 46.405 306 151 4 4 296 22 327 6.12e-95 284
MS.gene38513.t1 AT5G19890 50.162 309 133 9 2 296 26 327 1.61e-93 280
MS.gene38513.t1 AT4G16270 50.168 297 136 5 10 296 54 348 1.92e-93 280
MS.gene38513.t1 AT4G08780 45.425 306 154 4 4 296 22 327 2.97e-93 280
MS.gene38513.t1 AT2G38380 46.732 306 151 4 3 296 28 333 4.23e-93 280
MS.gene38513.t1 AT1G49570 47.195 303 148 4 2 292 44 346 4.24e-92 277
MS.gene38513.t1 AT2G38390 45.752 306 154 4 3 296 28 333 3.03e-91 275
MS.gene38513.t1 AT3G32980 44.951 307 156 5 3 296 28 334 1.94e-90 273
MS.gene38513.t1 AT1G68850 42.810 306 160 5 6 296 30 335 9.46e-90 271
MS.gene38513.t1 AT3G49110 44.444 306 157 5 4 296 31 336 7.42e-89 269
MS.gene38513.t1 AT3G49120 43.689 309 161 5 1 296 27 335 5.02e-88 267
MS.gene38513.t1 AT2G35380 47.059 306 147 3 6 296 30 335 6.48e-88 266
MS.gene38513.t1 AT2G22420 46.179 301 148 6 6 296 23 319 3.72e-87 264
MS.gene38513.t1 AT5G19880 44.839 310 157 4 1 296 20 329 5.04e-83 253
MS.gene38513.t1 AT4G33420 45.238 294 153 6 6 296 37 325 9.70e-81 247
MS.gene38513.t1 AT4G33420 45.238 294 153 6 6 296 84 372 4.68e-80 247
MS.gene38513.t1 AT5G64120 43.051 295 155 5 10 296 39 328 4.69e-77 238
MS.gene38513.t1 AT5G17820 43.046 302 153 6 4 296 22 313 2.00e-75 233
MS.gene38513.t1 AT1G71695 42.282 298 163 6 6 296 44 339 5.44e-75 234
MS.gene38513.t1 AT5G15180 40.864 301 165 6 6 296 32 329 9.98e-75 232
MS.gene38513.t1 AT1G05240 40.264 303 166 6 2 292 22 321 1.08e-74 232
MS.gene38513.t1 AT1G05250 40.264 303 166 6 2 292 22 321 1.08e-74 232
MS.gene38513.t1 AT1G05260 40.523 306 169 6 2 296 22 325 1.41e-74 231
MS.gene38513.t1 AT5G17820 43.046 302 153 6 4 296 75 366 1.73e-74 233
MS.gene38513.t1 AT5G40150 42.667 300 164 5 4 296 30 328 2.11e-74 231
MS.gene38513.t1 AT4G11290 39.869 306 171 6 3 296 22 326 2.72e-74 231
MS.gene38513.t1 AT3G01190 42.105 304 161 7 3 296 23 321 3.78e-74 230
MS.gene38513.t1 AT3G03670 41.722 302 166 3 4 296 21 321 3.78e-74 230
MS.gene38513.t1 AT5G51890 41.639 305 162 7 3 296 23 322 1.64e-73 229
MS.gene38513.t1 AT5G42180 41.472 299 161 5 6 295 23 316 1.26e-72 226
MS.gene38513.t1 AT2G41480 41.558 308 161 6 3 296 26 328 3.35e-72 226
MS.gene38513.t1 AT3G21770 40.667 300 165 6 4 292 27 324 5.67e-72 225
MS.gene38513.t1 AT3G28200 41.137 299 169 5 4 296 19 316 1.72e-71 223
MS.gene38513.t1 AT4G33870 36.937 333 165 5 6 294 68 399 1.43e-70 224
MS.gene38513.t1 AT5G14130 39.145 304 171 6 4 296 30 330 5.72e-70 220
MS.gene38513.t1 AT5G39580 43.243 296 154 6 10 296 29 319 1.82e-69 218
MS.gene38513.t1 AT5G14130 39.145 304 171 6 4 296 71 371 2.38e-69 219
MS.gene38513.t1 AT4G26010 40.541 296 167 6 4 296 20 309 6.78e-69 216
MS.gene38513.t1 AT4G26010 40.541 296 167 6 4 296 48 337 1.39e-68 216
MS.gene38513.t1 AT5G47000 40.532 301 170 5 4 296 31 330 1.78e-66 211
MS.gene38513.t1 AT2G35380 45.902 244 119 2 66 296 4 247 2.33e-66 208
MS.gene38513.t1 AT4G17690 39.933 298 171 5 6 296 26 322 2.87e-65 207
MS.gene38513.t1 AT1G34510 39.262 298 172 6 2 296 18 309 3.39e-65 207
MS.gene38513.t1 AT1G77100 41.254 303 165 9 3 296 21 319 4.23e-64 204
MS.gene38513.t1 AT1G30870 39.145 304 163 8 6 296 51 345 7.34e-64 205
MS.gene38513.t1 AT4G37530 37.338 308 181 4 1 296 22 329 1.42e-63 203
MS.gene38513.t1 AT2G18980 38.636 308 171 5 2 296 21 323 1.30e-62 201
MS.gene38513.t1 AT4G30170 37.460 315 165 7 2 296 23 325 5.57e-62 199
MS.gene38513.t1 AT4G31760 38.689 305 172 4 3 296 26 326 6.45e-62 199
MS.gene38513.t1 AT5G67400 36.601 306 182 4 3 296 24 329 4.01e-60 194
MS.gene38513.t1 AT4G25980 36.808 307 176 7 4 296 24 326 5.81e-60 194
MS.gene38513.t1 AT1G24110 36.482 307 183 5 1 296 17 322 2.59e-59 192
MS.gene38513.t1 AT5G64110 40.000 300 160 7 10 296 38 330 1.37e-58 191
MS.gene38513.t1 AT4G37520 36.721 305 181 5 4 296 25 329 2.57e-58 190
MS.gene38513.t1 AT2G34060 38.033 305 171 9 5 293 41 343 4.77e-58 190
MS.gene38513.t1 AT3G49960 36.275 306 183 4 3 296 24 329 1.15e-57 188
MS.gene38513.t1 AT2G24800 37.380 313 164 6 4 296 29 329 8.53e-57 186
MS.gene38513.t1 AT4G37520 36.393 305 179 6 4 296 25 326 1.76e-56 185
MS.gene38513.t1 AT2G39040 36.774 310 178 8 3 296 43 350 1.34e-55 183
MS.gene38513.t1 AT3G17070 36.634 303 179 5 6 296 38 339 2.78e-55 182
MS.gene38513.t1 AT4G37530 38.760 258 146 4 1 246 22 279 1.30e-54 179
MS.gene38513.t1 AT5G64100 36.789 299 169 7 10 296 41 331 2.79e-53 177
MS.gene38513.t1 AT2G37130 35.333 300 185 5 5 296 29 327 1.36e-52 175
MS.gene38513.t1 AT2G37130 35.473 296 182 5 9 296 2 296 3.86e-52 173
MS.gene38513.t1 AT4G21960 34.114 299 187 6 6 296 31 327 1.57e-51 172
MS.gene38513.t1 AT5G22410 34.653 303 177 10 5 293 27 322 2.78e-51 172
MS.gene38513.t1 AT2G43480 35.390 308 177 8 5 296 34 335 1.63e-50 170
MS.gene38513.t1 AT5G24070 33.670 297 177 7 14 296 45 335 1.59e-46 159
MS.gene38513.t1 AT3G17070 36.154 260 154 5 48 296 18 276 2.03e-44 152
MS.gene38513.t1 AT5G39580 44.670 197 98 5 10 204 29 216 9.08e-43 147
MS.gene38513.t1 AT4G25980 42.941 170 91 4 4 171 69 234 1.84e-38 137
MS.gene38513.t1 AT2G24800 44.643 168 87 3 4 169 29 192 7.26e-35 126
MS.gene38513.t1 AT4G32320 28.125 256 121 7 37 277 114 321 3.13e-17 80.9
MS.gene38513.t1 AT3G42570 40.206 97 57 1 76 171 53 149 4.81e-16 74.3
MS.gene38513.t1 AT1G07890 28.634 227 122 7 60 282 59 249 7.14e-14 70.5
MS.gene38513.t1 AT1G77490 25.882 255 152 7 40 278 106 339 7.32e-14 71.6
MS.gene38513.t1 AT1G77490 25.397 252 157 6 40 278 106 339 7.77e-14 71.6
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT1G07890 28.700 223 119 7 60 278 59 245 9.32e-14 70.1
MS.gene38513.t1 AT4G08390 23.529 272 168 7 20 278 115 359 1.08e-12 68.2
MS.gene38513.t1 AT4G08390 23.529 272 168 7 20 278 116 360 1.16e-12 68.2
MS.gene38513.t1 AT4G08390 23.529 272 168 7 20 278 116 360 1.16e-12 68.2
MS.gene38513.t1 AT4G08390 23.529 272 168 7 20 278 116 360 1.16e-12 68.2

Find 66 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTAGTGCTATGGTGAAAA+TGG 0.207916 3.4:+61810763 MS.gene38513:CDS
TTTATAATAGAAAGGGCTTT+AGG 0.216313 3.4:-61808578 None:intergenic
AAAGAGATGGTTGTCCTTTC+AGG 0.221896 3.4:+61810143 MS.gene38513:CDS
TGGCCGTTATTCCCGGTTAA+AGG 0.231977 3.4:-61810797 None:intergenic
CAATTATCTTCAGATTTCTA+TGG 0.243841 3.4:+61808545 MS.gene38513:CDS
TGATATTCCATCCCCTCTTA+TGG 0.297430 3.4:+61810073 MS.gene38513:CDS
ACGAATCTGGCCGTTATTCC+CGG 0.335428 3.4:-61810804 None:intergenic
TTATAATAGAAAGGGCTTTA+GGG 0.351671 3.4:-61808577 None:intergenic
TGACAACATTAAAACTCAAT+TGG 0.351916 3.4:+61809480 MS.gene38513:CDS
GGAAATCTCAGTCCTTTAAC+CGG 0.390312 3.4:+61810785 MS.gene38513:CDS
CAATTGACACCTGGCTTGTC+CGG 0.396982 3.4:-61810477 None:intergenic
TGCGGCAATTAGTACGAATC+TGG 0.400407 3.4:-61810817 None:intergenic
TGAAAGGACAACCATCTCTT+TGG 0.409369 3.4:-61810141 None:intergenic
CCAACATGGAGTGTTGGATT+AGG 0.409859 3.4:+61810008 MS.gene38513:CDS
AAATCTGTATAGAAAGTTGT+AGG 0.425690 3.4:-61810740 None:intergenic
AGTTGTAGGACTTGTGCTAT+AGG 0.433383 3.4:-61810726 None:intergenic
CAACGATTTAGTTAACTTTG+CGG 0.433402 3.4:-61810835 None:intergenic
GGTTGCAAAATTTGAATCAA+TGG 0.435863 3.4:-61810528 None:intergenic
TTGCTATCACCACCTGTACT+TGG 0.442974 3.4:-61810569 None:intergenic
CTGCAGTGTTTATAATAGAA+AGG 0.449549 3.4:-61808586 None:intergenic
GTGCATTGACAAAGCAATCA+TGG 0.468415 3.4:-61808667 None:intergenic
TGCATAGGTGCTCATACAAC+CGG 0.472398 3.4:+61810458 MS.gene38513:intron
AGCTTGAAGTGTCATCTAAT+AGG 0.475347 3.4:-61809399 None:intergenic
TGCAGTGTTTATAATAGAAA+GGG 0.475406 3.4:-61808585 None:intergenic
TGGTTGTCTCATTATAAATC+CGG 0.475695 3.4:-61810508 None:intergenic
TGCACCAGCCGACTTCTCTC+CGG 0.477310 3.4:-61809425 None:intergenic
CAAAGCAATCATGGAAATGA+AGG 0.492608 3.4:-61808658 None:intergenic
GCTAGTGCTATGGTGAAAAT+GGG 0.496755 3.4:+61810764 MS.gene38513:CDS
AGGTCACTAAGATCCATAAG+AGG 0.497849 3.4:-61810086 None:intergenic
GGCAGTATCTTTACTAGCAG+TGG 0.501994 3.4:-61810045 None:intergenic
CAATTGGAAACTGCTTGTCC+TGG 0.510442 3.4:+61809496 MS.gene38513:CDS
CTCAGTTGGGTGGTCCAACA+TGG 0.519896 3.4:+61809994 MS.gene38513:intron
GAAATATGTGGTTACCTGAA+AGG 0.520984 3.4:-61810157 None:intergenic
AGTCCTTTAACCGGGAATAA+CGG 0.521082 3.4:+61810794 MS.gene38513:CDS
AAATCAAACTGTCCAAGTAC+AGG 0.528486 3.4:+61810557 MS.gene38513:CDS
GGTGTCAATTGTTCAGAGGC+CGG 0.528795 3.4:+61810489 MS.gene38513:CDS
CTCATACAACCGGACAAGCC+AGG 0.537911 3.4:+61810468 MS.gene38513:CDS
AGGGGATGGAATATCATTAG+TGG 0.539253 3.4:-61810066 None:intergenic
CTAAGATCCATAAGAGGGGA+TGG 0.539670 3.4:-61810080 None:intergenic
AATTTACTATCTCAGTTGGG+TGG 0.542773 3.4:+61809984 MS.gene38513:intron
GATGACACTTCAAGCTTCAC+CGG 0.544535 3.4:+61809406 MS.gene38513:CDS
GGTGGTCCAACATGGAGTGT+TGG 0.550979 3.4:+61810002 MS.gene38513:CDS
AAGGACAACCATCTCTTTGG+TGG 0.552824 3.4:-61810138 None:intergenic
GGGATTTACCACCAAAGAGA+TGG 0.564115 3.4:+61810130 MS.gene38513:CDS
GCCTCTGAACAATTGACACC+TGG 0.564734 3.4:-61810486 None:intergenic
AAGCTTCACCGGAGAGAAGT+CGG 0.573162 3.4:+61809417 MS.gene38513:CDS
TTCACCGGAGAGAAGTCGGC+TGG 0.575709 3.4:+61809421 MS.gene38513:CDS
TCAGCACAAGAAACAACTCC+AGG 0.586737 3.4:-61809514 None:intergenic
GGTCACTAAGATCCATAAGA+GGG 0.589820 3.4:-61810085 None:intergenic
TGTTTCTAAAGAACATCGCA+TGG 0.595897 3.4:+61808619 MS.gene38513:CDS
AGATAATTGAGCAGAGACCA+TGG 0.600081 3.4:-61808531 None:intergenic
CCTAATCCAACACTCCATGT+TGG 0.600465 3.4:-61810008 None:intergenic
GATCAACAACTCTTCAGTGG+TGG 0.610710 3.4:+61810680 MS.gene38513:CDS
AGCATTGTCAAATAGCACAT+TGG 0.616357 3.4:-61810615 None:intergenic
TTGTGACATCAAGTGAGGTA+AGG 0.618359 3.4:-61810592 None:intergenic
GCAAATGTAAATTCTCTCAG+AGG 0.619141 3.4:+61809445 MS.gene38513:CDS
TGCTCGTGATGCTGTTGTAG+CGG 0.635557 3.4:+61809552 MS.gene38513:CDS
GCCAGGTGTCAATTGTTCAG+AGG 0.643723 3.4:+61810485 MS.gene38513:CDS
GAAATCTCAGTCCTTTAACC+GGG 0.649187 3.4:+61810786 MS.gene38513:CDS
TCTGATCAACAACTCTTCAG+TGG 0.652175 3.4:+61810677 MS.gene38513:CDS
TCAAACTGTCCAAGTACAGG+TGG 0.661430 3.4:+61810560 MS.gene38513:CDS
GTTTCTAAAGAACATCGCAT+GGG 0.661595 3.4:+61808620 MS.gene38513:CDS
AGCAATCATGGAAATGAAGG+CGG 0.675421 3.4:-61808655 None:intergenic
ATTGGTTGTGACATCAAGTG+AGG 0.686079 3.4:-61810597 None:intergenic
GTCACTAAGATCCATAAGAG+GGG 0.687769 3.4:-61810084 None:intergenic
TGGACAGTTTGATTTCACTG+AGG 0.727605 3.4:-61810549 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTAATTAAGAAATATG+TGG - chr3.4:61810172-61810191 None:intergenic 10.0%
!!! AAAATTTTTGGTTTTATATT+TGG + chr3.4:61808882-61808901 MS.gene38513:intron 10.0%
!!! AAATATTTAATTTATCATCT+AGG - chr3.4:61809152-61809171 None:intergenic 10.0%
!!! AAATTATCTAAAACTTTTTA+AGG - chr3.4:61809932-61809951 None:intergenic 10.0%
!!! TAGAATTTTTTTTTGTTAAT+AGG + chr3.4:61809720-61809739 MS.gene38513:intron 10.0%
!! AAAAAATGTTAGTTAAAGTT+TGG - chr3.4:61809958-61809977 None:intergenic 15.0%
!! AAAAACTTGATCTTAATTAT+AGG - chr3.4:61810200-61810219 None:intergenic 15.0%
!! ATGAACAATCATATATATAT+AGG - chr3.4:61809176-61809195 None:intergenic 15.0%
!! ATTTAACAAATTGAAATATG+TGG - chr3.4:61809776-61809795 None:intergenic 15.0%
!! CATTAATATGAACATAAATT+AGG - chr3.4:61808917-61808936 None:intergenic 15.0%
!! TCAAAATTCACTATATTTAT+CGG - chr3.4:61808819-61808838 None:intergenic 15.0%
!!! AACATCCTATTTTATTTTTT+AGG - chr3.4:61808850-61808869 None:intergenic 15.0%
!!! AAGATCAAGTTTTTAAATTA+TGG + chr3.4:61810206-61810225 MS.gene38513:intron 15.0%
!!! ACATCCTATTTTATTTTTTA+GGG - chr3.4:61808849-61808868 None:intergenic 15.0%
!! AAGAATCTAGTTAACAAAAA+AGG + chr3.4:61810644-61810663 MS.gene38513:CDS 20.0%
!! ACATTAAGTGCTTATAAATA+AGG + chr3.4:61809616-61809635 MS.gene38513:intron 20.0%
!! TATCATTACTCTTAAAAACA+AGG - chr3.4:61810380-61810399 None:intergenic 20.0%
!!! ATAAAACCAAAAATTTTGTG+AGG - chr3.4:61808879-61808898 None:intergenic 20.0%
!!! GATTTTTTGTTTTGAAAACT+TGG + chr3.4:61810434-61810453 MS.gene38513:intron 20.0%
! AAATCTGTATAGAAAGTTGT+AGG - chr3.4:61810743-61810762 None:intergenic 25.0%
! ACAAAACGAAAAATGTTATG+AGG + chr3.4:61809070-61809089 MS.gene38513:intron 25.0%
! ATGATATTTGTACAACTATC+TGG + chr3.4:61810394-61810413 MS.gene38513:intron 25.0%
! ATTCACTATAGTACTAAGAT+TGG + chr3.4:61809845-61809864 MS.gene38513:intron 25.0%
! CAAGGATATTTGATATGTTA+GGG - chr3.4:61809663-61809682 None:intergenic 25.0%
! CAATTATCTTCAGATTTCTA+TGG + chr3.4:61808545-61808564 MS.gene38513:CDS 25.0%
! TCGTCCCTAAAAAATAAAAT+AGG + chr3.4:61808842-61808861 MS.gene38513:intron 25.0%
! TGAACATAAATTAGGCATTA+AGG - chr3.4:61808909-61808928 None:intergenic 25.0%
! TGACAACATTAAAACTCAAT+TGG + chr3.4:61809480-61809499 MS.gene38513:CDS 25.0%
! TGCAGTGTTTATAATAGAAA+GGG - chr3.4:61808588-61808607 None:intergenic 25.0%
! TTATAATAGAAAGGGCTTTA+GGG - chr3.4:61808580-61808599 None:intergenic 25.0%
! TTCAATTTACTATCTCAGTT+GGG + chr3.4:61809981-61810000 MS.gene38513:intron 25.0%
! TTTATAATAGAAAGGGCTTT+AGG - chr3.4:61808581-61808600 None:intergenic 25.0%
!! CGCATCAAACTTTTATATTA+CGG + chr3.4:61809214-61809233 MS.gene38513:intron 25.0%
!! TTTCATCCTCACAAAATTTT+TGG + chr3.4:61808870-61808889 MS.gene38513:intron 25.0%
!!! ATATCTGCTTTTTCAAACAA+GGG + chr3.4:61810110-61810129 MS.gene38513:CDS 25.0%
!!! ATGATGATTTTATAACTTGC+AGG + chr3.4:61809360-61809379 MS.gene38513:intron 25.0%
!!! TGATGATTTTATAACTTGCA+GGG + chr3.4:61809361-61809380 MS.gene38513:intron 25.0%
!!! TTTTTTTCTTTTAAAGAGCC+TGG + chr3.4:61809580-61809599 MS.gene38513:intron 25.0%
ATACCTGTAAATAGTACTCT+AGG + chr3.4:61809872-61809891 MS.gene38513:intron 30.0%
CTGCAGTGTTTATAATAGAA+AGG - chr3.4:61808589-61808608 None:intergenic 30.0%
GCAAGGATATTTGATATGTT+AGG - chr3.4:61809664-61809683 None:intergenic 30.0%
GGTTGCAAAATTTGAATCAA+TGG - chr3.4:61810531-61810550 None:intergenic 30.0%
GTTCAATTTACTATCTCAGT+TGG + chr3.4:61809980-61809999 MS.gene38513:intron 30.0%
TGATGTTTCATCTTGAATTG+CGG + chr3.4:61810347-61810366 MS.gene38513:intron 30.0%
TGGTTGTCTCATTATAAATC+CGG - chr3.4:61810511-61810530 None:intergenic 30.0%
TGTTTGAAAAAGCAGATATG+AGG - chr3.4:61810109-61810128 None:intergenic 30.0%
TTGCAAACATAGTTACATTG+CGG + chr3.4:61810303-61810322 MS.gene38513:intron 30.0%
TTTCATAAGTACAACTCAGA+TGG - chr3.4:61809698-61809717 None:intergenic 30.0%
!! TTTTGAAAACTTGGATGCAT+AGG + chr3.4:61810443-61810462 MS.gene38513:intron 30.0%
!!! CATATCTGCTTTTTCAAACA+AGG + chr3.4:61810109-61810128 MS.gene38513:CDS 30.0%
AAATCAAACTGTCCAAGTAC+AGG + chr3.4:61810557-61810576 MS.gene38513:CDS 35.0%
AAGGAATTACAGTCTCAAAC+CGG + chr3.4:61809635-61809654 MS.gene38513:intron 35.0%
AATTTACTATCTCAGTTGGG+TGG + chr3.4:61809984-61810003 MS.gene38513:intron 35.0%
AGATGGCAATAGATATTGCA+AGG - chr3.4:61809681-61809700 None:intergenic 35.0%
AGCATTGTCAAATAGCACAT+TGG - chr3.4:61810618-61810637 None:intergenic 35.0%
CAAAGCAATCATGGAAATGA+AGG - chr3.4:61808661-61808680 None:intergenic 35.0%
GAAATATGTGGTTACCTGAA+AGG - chr3.4:61810160-61810179 None:intergenic 35.0%
GCAAATGTAAATTCTCTCAG+AGG + chr3.4:61809445-61809464 MS.gene38513:CDS 35.0%
! AGCTTGAAGTGTCATCTAAT+AGG - chr3.4:61809402-61809421 None:intergenic 35.0%
! CAACCTAGAGTACTATTTAC+AGG - chr3.4:61809878-61809897 None:intergenic 35.0%
! GTTTCTAAAGAACATCGCAT+GGG + chr3.4:61808620-61808639 MS.gene38513:CDS 35.0%
! TACAGATTTTGCTAGTGCTA+TGG + chr3.4:61810754-61810773 MS.gene38513:CDS 35.0%
! TGTTTCTAAAGAACATCGCA+TGG + chr3.4:61808619-61808638 MS.gene38513:CDS 35.0%
!! TTTTCTTTTAAAGAGCCTGG+CGG + chr3.4:61809583-61809602 MS.gene38513:intron 35.0%
AAAGAGATGGTTGTCCTTTC+AGG + chr3.4:61810143-61810162 MS.gene38513:CDS 40.0%
AGCAATCATGGAAATGAAGG+CGG - chr3.4:61808658-61808677 None:intergenic 40.0%
AGGGGATGGAATATCATTAG+TGG - chr3.4:61810069-61810088 None:intergenic 40.0%
AGGTCACTAAGATCCATAAG+AGG - chr3.4:61810089-61810108 None:intergenic 40.0%
AGTCCTTTAACCGGGAATAA+CGG + chr3.4:61810794-61810813 MS.gene38513:CDS 40.0%
AGTTGTAGGACTTGTGCTAT+AGG - chr3.4:61810729-61810748 None:intergenic 40.0%
ATTGGTTGTGACATCAAGTG+AGG - chr3.4:61810600-61810619 None:intergenic 40.0%
CACACATGAATGTTCATGCA+AGG - chr3.4:61809128-61809147 None:intergenic 40.0%
CAGAGAATTGCAGTCAAATG+TGG + chr3.4:61810263-61810282 MS.gene38513:intron 40.0%
GAAATCTCAGTCCTTTAACC+GGG + chr3.4:61810786-61810805 MS.gene38513:CDS 40.0%
GCTAGTGCTATGGTGAAAAT+GGG + chr3.4:61810764-61810783 MS.gene38513:CDS 40.0%
GGAAATCTCAGTCCTTTAAC+CGG + chr3.4:61810785-61810804 MS.gene38513:CDS 40.0%
GGTCACTAAGATCCATAAGA+GGG - chr3.4:61810088-61810107 None:intergenic 40.0%
GTCACTAAGATCCATAAGAG+GGG - chr3.4:61810087-61810106 None:intergenic 40.0%
TATTTGATATGTTAGGGCGC+CGG - chr3.4:61809657-61809676 None:intergenic 40.0%
TCTGATCAACAACTCTTCAG+TGG + chr3.4:61810677-61810696 MS.gene38513:CDS 40.0%
TGAAAGGACAACCATCTCTT+TGG - chr3.4:61810144-61810163 None:intergenic 40.0%
TGATATTCCATCCCCTCTTA+TGG + chr3.4:61810073-61810092 MS.gene38513:CDS 40.0%
TGCTAGTGCTATGGTGAAAA+TGG + chr3.4:61810763-61810782 MS.gene38513:CDS 40.0%
TTGTGACATCAAGTGAGGTA+AGG - chr3.4:61810595-61810614 None:intergenic 40.0%
! GTGCATTGACAAAGCAATCA+TGG - chr3.4:61808670-61808689 None:intergenic 40.0%
! TGGACAGTTTGATTTCACTG+AGG - chr3.4:61810552-61810571 None:intergenic 40.0%
AAGGACAACCATCTCTTTGG+TGG - chr3.4:61810141-61810160 None:intergenic 45.0%
CAATTGGAAACTGCTTGTCC+TGG + chr3.4:61809496-61809515 MS.gene38513:CDS 45.0%
CCTAATCCAACACTCCATGT+TGG - chr3.4:61810011-61810030 None:intergenic 45.0%
CTAAGATCCATAAGAGGGGA+TGG - chr3.4:61810083-61810102 None:intergenic 45.0%
GATCAACAACTCTTCAGTGG+TGG + chr3.4:61810680-61810699 MS.gene38513:CDS 45.0%
GATGACACTTCAAGCTTCAC+CGG + chr3.4:61809406-61809425 MS.gene38513:CDS 45.0%
GCAGTTTGCAGCTACAATTG+TGG - chr3.4:61809315-61809334 None:intergenic 45.0%
GGCAGTATCTTTACTAGCAG+TGG - chr3.4:61810048-61810067 None:intergenic 45.0%
GGGATTTACCACCAAAGAGA+TGG + chr3.4:61810130-61810149 MS.gene38513:CDS 45.0%
TCAAACTGTCCAAGTACAGG+TGG + chr3.4:61810560-61810579 MS.gene38513:CDS 45.0%
TCAGCACAAGAAACAACTCC+AGG - chr3.4:61809517-61809536 None:intergenic 45.0%
TGCATAGGTGCTCATACAAC+CGG + chr3.4:61810458-61810477 MS.gene38513:intron 45.0%
TGCGGCAATTAGTACGAATC+TGG - chr3.4:61810820-61810839 None:intergenic 45.0%
TTGCAATGCGACTGCAATTG+AGG - chr3.4:61810289-61810308 None:intergenic 45.0%
TTGCTATCACCACCTGTACT+TGG - chr3.4:61810572-61810591 None:intergenic 45.0%
!! CCAACATGGAGTGTTGGATT+AGG + chr3.4:61810008-61810027 MS.gene38513:CDS 45.0%
AAGCTTCACCGGAGAGAAGT+CGG + chr3.4:61809417-61809436 MS.gene38513:CDS 50.0%
AATGTGTGAGTTTAGCCGCC+AGG - chr3.4:61809601-61809620 None:intergenic 50.0%
ACGAATCTGGCCGTTATTCC+CGG - chr3.4:61810807-61810826 None:intergenic 50.0%
GACAAATGCAGCTGCAGTTG+CGG + chr3.4:61809246-61809265 MS.gene38513:intron 50.0%
GCCAGGTGTCAATTGTTCAG+AGG + chr3.4:61810485-61810504 MS.gene38513:CDS 50.0%
GCCTCTGAACAATTGACACC+TGG - chr3.4:61810489-61810508 None:intergenic 50.0%
GGTGTCAATTGTTCAGAGGC+CGG + chr3.4:61810489-61810508 MS.gene38513:CDS 50.0%
TGCTCGTGATGCTGTTGTAG+CGG + chr3.4:61809552-61809571 MS.gene38513:CDS 50.0%
TGGCCGTTATTCCCGGTTAA+AGG - chr3.4:61810800-61810819 None:intergenic 50.0%
! CAATTGACACCTGGCTTGTC+CGG - chr3.4:61810480-61810499 None:intergenic 50.0%
AGTGCTCGTCTTGCGATCCT+AGG + chr3.4:61810236-61810255 MS.gene38513:intron 55.0%
ATGCAGCTGCAGTTGCGGTT+AGG + chr3.4:61809251-61809270 MS.gene38513:intron 55.0%
CTCAGTTGGGTGGTCCAACA+TGG + chr3.4:61809994-61810013 MS.gene38513:intron 55.0%
CTCATACAACCGGACAAGCC+AGG + chr3.4:61810468-61810487 MS.gene38513:CDS 55.0%
CTGCAATTCTCTGCGAGCCT+AGG - chr3.4:61810256-61810275 None:intergenic 55.0%
GGTGGTCCAACATGGAGTGT+TGG + chr3.4:61810002-61810021 MS.gene38513:CDS 55.0%
TTCACCGGAGAGAAGTCGGC+TGG + chr3.4:61809421-61809440 MS.gene38513:CDS 60.0%
! TGCACCAGCCGACTTCTCTC+CGG - chr3.4:61809428-61809447 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 61808533 61810850 61808533 ID=MS.gene38513
chr3.4 mRNA 61808533 61810850 61808533 ID=MS.gene38513.t1;Parent=MS.gene38513
chr3.4 exon 61808533 61808679 61808533 ID=MS.gene38513.t1.exon1;Parent=MS.gene38513.t1
chr3.4 CDS 61808533 61808679 61808533 ID=cds.MS.gene38513.t1;Parent=MS.gene38513.t1
chr3.4 exon 61809382 61809573 61809382 ID=MS.gene38513.t1.exon2;Parent=MS.gene38513.t1
chr3.4 CDS 61809382 61809573 61809382 ID=cds.MS.gene38513.t1;Parent=MS.gene38513.t1
chr3.4 exon 61809999 61810164 61809999 ID=MS.gene38513.t1.exon3;Parent=MS.gene38513.t1
chr3.4 CDS 61809999 61810164 61809999 ID=cds.MS.gene38513.t1;Parent=MS.gene38513.t1
chr3.4 exon 61810465 61810850 61810465 ID=MS.gene38513.t1.exon4;Parent=MS.gene38513.t1
chr3.4 CDS 61810465 61810850 61810465 ID=cds.MS.gene38513.t1;Parent=MS.gene38513.t1
Gene Sequence

>MS.gene38513

ATGGTCTCTGCTCAATTATCTTCAGATTTCTATGGAACAACTTGCCCTAAAGCCCTTTCTATTATAAACACTGCAGTGTGCAGTGCTGTTTCTAAAGAACATCGCATGGGTGCTTCATTGCTCCGCCTTCATTTCCATGATTGCTTTGTCAATGCACGTTCTTTCTTCTCTCTAGCTATCATATTCATGCATATAAGTGCATGCATTATTCATATGACTTTGCTTGCATGATCATGCATGTGTGACTTAGATAGTAAATTAAAGAGTTAAATAAGTATTTCTTCCGATAAATATAGTGAATTTTGATTTTCGTCCCTAAAAAATAAAATAGGATGTTTTTCATCCTCACAAAATTTTTGGTTTTATATTTGGTCCTTAATGCCTAATTTATGTTCATATTAATGTTAAGATTATCATTCTTTTTGTTTAAGATGTGTCTATGTTATGTCTATCTATTATATTCAACGCTTTTATTTTCATATTATGTTCAAGAAATGTCAAAAACATGTCAAAACTATATTCATTTGTGACAAAAAAACAAAACGAAAAATGTTATGAGGACGAAAACATATCGTTTTGTTCATATGACTTTCCTTGCATGAACATTCATGTGTGACCTAGATGATAAATTAAATATTTACCTATATATATATGATTGTTCATTTGTAGTCATAATAGTTACGCATCAAACTTTTATATTACGGTAAAATGCAGACAAATGCAGCTGCAGTTGCGGTTAGGTTGCATTTGTAAAGACGTTTAAAACTGTTATATTGTCGCCACAATTGTAGCTGCAAACTGCATTTGTAAAGAAAATTGTATCTTCAATGATGATTTTATAACTTGCAGGGATGTGATGCATCAGTCCTATTAGATGACACTTCAAGCTTCACCGGAGAGAAGTCGGCTGGTGCAAATGTAAATTCTCTCAGAGGTTTTGATGTGATTGACAACATTAAAACTCAATTGGAAACTGCTTGTCCTGGAGTTGTTTCTTGTGCTGATATTGTTGCAGCTGCTGCTCGTGATGCTGTTGTAGCGGTAAGTTTTTTTTCTTTTAAAGAGCCTGGCGGCTAAACTCACACATTAAGTGCTTATAAATAAGGAATTACAGTCTCAAACCGGCGCCCTAACATATCAAATATCCTTGCAATATCTATTGCCATCTGAGTTGTACTTATGAAAAATAGAATTTTTTTTTGTTAATAGGCAAGATAAATGAAAAAAATAATAGTGTATTCCACATATTTCAATTTGTTAAATTTAAAAAAGTATTATAATATGCAAAATATAGAAACAAATTGAAGTTATTATTCACTATAGTACTAAGATTGGATTTATACCTGTAAATAGTACTCTAGGTTGACAATTTGAATTTTATGTCAAAAAATTCAAACCTTAAAAAGTTTTAGATAATTTAAACCAAACTTTAACTAACATTTTTTGTGTTCAATTTACTATCTCAGTTGGGTGGTCCAACATGGAGTGTTGGATTAGGTAGAAGAGATTCAACCACTGCTAGTAAAGATACTGCCACTAATGATATTCCATCCCCTCTTATGGATCTTAGTGACCTCATATCTGCTTTTTCAAACAAGGGATTTACCACCAAAGAGATGGTTGTCCTTTCAGGTAACCACATATTTCTTAATTAATTAATTAAACCTATAATTAAGATCAAGTTTTTAAATTATGGTTGCAAAAGTGCTCGTCTTGCGATCCTAGGCTCGCAGAGAATTGCAGTCAAATGTGGCCTCAATTGCAGTCGCATTGCAAACATAGTTACATTGCGGTCGCAGAGACATCAAATGTCATGATGTTTCATCTTGAATTGCGGTCATGAACCTTGTTTTTAAGAGTAATGATATTTGTACAACTATCTGGTGACAGCATTTTCTAATGATTTTTTGTTTTGAAAACTTGGATGCATAGGTGCTCATACAACCGGACAAGCCAGGTGTCAATTGTTCAGAGGCCGGATTTATAATGAGACAACCATTGATTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGTACAGGTGGTGATAGCAACCTTACCTCACTTGATGTCACAACCAATGTGCTATTTGACAATGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTTTACATTCTGATCAACAACTCTTCAGTGGTGGTTCTACTGACTCTCAAGTCACTACCTATAGCACAAGTCCTACAACTTTCTATACAGATTTTGCTAGTGCTATGGTGAAAATGGGAAATCTCAGTCCTTTAACCGGGAATAACGGCCAGATTCGTACTAATTGCCGCAAAGTTAACTAA
Protein sequence

>MS.gene38513.t1

MVSAQLSSDFYGTTCPKALSIINTAVCSAVSKEHRMGASLLRLHFHDCFGCDASVLLDDTSSFTGEKSAGANVNSLRGFDVIDNIKTQLETACPGVVSCADIVAAAARDAVVALGGPTWSVGLGRRDSTTASKDTATNDIPSPLMDLSDLISAFSNKGFTTKEMVVLSGAHTTGQARCQLFRGRIYNETTIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPTTFYTDFASAMVKMGNLSPLTGNNGQIRTNCRKVN