Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059052.t1 | XP_003594849.1 | 95.5 | 157 | 7 | 0 | 1 | 157 | 1 | 157 | 9.00E-77 | 296.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059052.t1 | Q06931 | 86.6 | 157 | 21 | 0 | 1 | 157 | 1 | 157 | 1.7e-71 | 270.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059052.t1 | G7INB7 | 95.5 | 157 | 7 | 0 | 1 | 157 | 1 | 157 | 6.5e-77 | 296.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050883 | MS.gene059052 | 0.803433 | 3.49E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene059052 | 0.811522 | 6.71E-51 | -1.69E-46 |
| MS.gene051367 | MS.gene059052 | 0.802873 | 4.56E-49 | -1.69E-46 |
| MS.gene053083 | MS.gene059052 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene059052 | 0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene056310 | MS.gene059052 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene056311 | MS.gene059052 | 0.826758 | 2.28E-54 | -1.69E-46 |
| MS.gene057499 | MS.gene059052 | 0.817649 | 2.95E-52 | -1.69E-46 |
| MS.gene059052 | MS.gene060595 | 0.801837 | 7.46E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene06077 | -0.811245 | 7.71E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene064019 | 0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene069357 | 0.81084 | 9.44E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene071847 | 0.885934 | 5.30E-72 | -1.69E-46 |
| MS.gene059052 | MS.gene071849 | 0.87564 | 2.63E-68 | -1.69E-46 |
| MS.gene059052 | MS.gene072476 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene073565 | -0.806877 | 6.64E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene073608 | -0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene073640 | -0.838301 | 3.12E-57 | -1.69E-46 |
| MS.gene059052 | MS.gene20878 | -0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene21575 | 0.83466 | 2.64E-56 | -1.69E-46 |
| MS.gene059052 | MS.gene24474 | -0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene24491 | 0.836781 | 7.65E-57 | -1.69E-46 |
| MS.gene059052 | MS.gene28723 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene059052 | MS.gene29342 | 0.805203 | 1.50E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene33913 | 0.810452 | 1.14E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene34412 | 0.832201 | 1.08E-55 | -1.69E-46 |
| MS.gene059052 | MS.gene37678 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene38094 | 0.834282 | 3.28E-56 | -1.69E-46 |
| MS.gene059052 | MS.gene38095 | 0.834307 | 3.23E-56 | -1.69E-46 |
| MS.gene059052 | MS.gene38097 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene38172 | 0.821335 | 4.26E-53 | -1.69E-46 |
| MS.gene059052 | MS.gene38173 | 0.811222 | 7.80E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene38513 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene059052 | MS.gene41567 | 0.801528 | 8.63E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene44721 | 0.802828 | 4.66E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene44722 | 0.808862 | 2.51E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene44723 | 0.806589 | 7.64E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene46057 | 0.816124 | 6.50E-52 | -1.69E-46 |
| MS.gene059052 | MS.gene47049 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene49887 | 0.80537 | 1.38E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene51429 | 0.879844 | 8.94E-70 | -1.69E-46 |
| MS.gene059052 | MS.gene54303 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene55013 | 0.802934 | 4.43E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene60761 | 0.820402 | 6.99E-53 | -1.69E-46 |
| MS.gene059052 | MS.gene63691 | 0.804542 | 2.05E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene64630 | 0.800782 | 1.23E-48 | -1.69E-46 |
| MS.gene059052 | MS.gene66458 | -0.817013 | 4.11E-52 | -1.69E-46 |
| MS.gene059052 | MS.gene70809 | -0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene75048 | 0.802913 | 4.48E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene76539 | 0.803291 | 3.74E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene78593 | 0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene84043 | -0.808303 | 3.31E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene86145 | 0.822394 | 2.42E-53 | -1.69E-46 |
| MS.gene059052 | MS.gene91775 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene91976 | 0.814783 | 1.29E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene91977 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene92618 | -0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene93015 | 0.82922 | 5.82E-55 | -1.69E-46 |
| MS.gene059052 | MS.gene94263 | 0.800456 | 1.43E-48 | -1.69E-46 |
| MS.gene059052 | MS.gene96309 | -0.832609 | 8.57E-56 | -1.69E-46 |
| MS.gene059052 | MS.gene97860 | 0.824064 | 9.88E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059052.t1 | MTR_2g035320 | 95.541 | 157 | 7 | 0 | 1 | 157 | 1 | 157 | 2.80e-106 | 300 |
| MS.gene059052.t1 | MTR_2g035190 | 94.268 | 157 | 9 | 0 | 1 | 157 | 1 | 157 | 8.97e-105 | 296 |
| MS.gene059052.t1 | MTR_2g035210 | 92.357 | 157 | 12 | 0 | 1 | 157 | 1 | 157 | 1.87e-103 | 293 |
| MS.gene059052.t1 | MTR_2g035220 | 89.172 | 157 | 17 | 0 | 1 | 157 | 1 | 157 | 2.99e-99 | 282 |
| MS.gene059052.t1 | MTR_6g033450 | 64.968 | 157 | 55 | 0 | 1 | 157 | 1 | 157 | 2.32e-69 | 207 |
| MS.gene059052.t1 | MTR_4g120970 | 64.968 | 157 | 55 | 0 | 1 | 157 | 1 | 157 | 2.32e-69 | 207 |
| MS.gene059052.t1 | MTR_2g035100 | 63.057 | 157 | 58 | 0 | 1 | 157 | 1 | 157 | 8.57e-67 | 200 |
| MS.gene059052.t1 | MTR_2g035105 | 62.420 | 157 | 59 | 0 | 1 | 157 | 1 | 157 | 8.64e-66 | 197 |
| MS.gene059052.t1 | MTR_2g035130 | 61.146 | 157 | 61 | 0 | 1 | 157 | 1 | 157 | 6.33e-65 | 196 |
| MS.gene059052.t1 | MTR_2g035150 | 61.146 | 157 | 61 | 0 | 1 | 157 | 1 | 157 | 2.43e-64 | 194 |
| MS.gene059052.t1 | MTR_2g035320 | 94.845 | 97 | 5 | 0 | 61 | 157 | 26 | 122 | 1.07e-61 | 186 |
| MS.gene059052.t1 | MTR_2g035120 | 55.414 | 157 | 70 | 0 | 1 | 157 | 1 | 157 | 1.82e-58 | 179 |
| MS.gene059052.t1 | MTR_2g035170 | 45.860 | 157 | 85 | 0 | 1 | 157 | 1 | 157 | 2.61e-46 | 148 |
| MS.gene059052.t1 | MTR_4g120950 | 42.236 | 161 | 86 | 5 | 1 | 157 | 1 | 158 | 8.06e-32 | 112 |
| MS.gene059052.t1 | MTR_2g435310 | 32.051 | 156 | 105 | 1 | 1 | 155 | 1 | 156 | 4.76e-30 | 107 |
| MS.gene059052.t1 | MTR_4g120760 | 33.121 | 157 | 104 | 1 | 1 | 156 | 1 | 157 | 1.18e-29 | 106 |
| MS.gene059052.t1 | MTR_4g120760 | 33.121 | 157 | 104 | 1 | 1 | 156 | 1 | 157 | 1.30e-29 | 106 |
| MS.gene059052.t1 | MTR_4g120940 | 61.644 | 73 | 28 | 0 | 85 | 157 | 47 | 119 | 1.81e-23 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACATGGATAACTTCTTAA+TGG | 0.262600 | 2.4:+55913850 | None:intergenic |
| GATAACTTCTTAATGGTTCC+TGG | 0.335652 | 2.4:+55913857 | None:intergenic |
| TACAGCTTGGTAGGAGGAAC+AGG | 0.341343 | 2.4:-55913228 | MS.gene059052:CDS |
| TTCAACAATTTCAACACTTT+GGG | 0.350751 | 2.4:+55913892 | None:intergenic |
| CTTCAACAATTTCAACACTT+TGG | 0.364915 | 2.4:+55913891 | None:intergenic |
| GAAACTAAGGCCAGAGGAAC+TGG | 0.366866 | 2.4:-55913072 | MS.gene059052:CDS |
| TGGGCAGCAGAAATCACCTT+TGG | 0.387864 | 2.4:+55913911 | None:intergenic |
| AGAGCTTTGTAGAGTTTAGC+TGG | 0.394931 | 2.4:+55913959 | None:intergenic |
| TGCAGTAGATGAGGCAAACT+TGG | 0.396721 | 2.4:-55913259 | MS.gene059052:CDS |
| GTTGAAATTGTTGAAGGAAA+TGG | 0.402462 | 2.4:-55913884 | MS.gene059052:CDS |
| CTTGATAAGTCCAGTTCCTC+TGG | 0.419380 | 2.4:+55913062 | None:intergenic |
| AGATAGAGCTGCATCACCTT+TGG | 0.442558 | 2.4:+55913110 | None:intergenic |
| GGGCAGCAGAAATCACCTTT+GGG | 0.449440 | 2.4:+55913912 | None:intergenic |
| AAAATTGTGGCTGGCTCTGA+TGG | 0.498760 | 2.4:-55913168 | MS.gene059052:CDS |
| TAATTTGTGTAGCACAAAGT+TGG | 0.501990 | 2.4:+55913284 | None:intergenic |
| CAAAGTGTTGAAATTGTTGA+AGG | 0.502542 | 2.4:-55913890 | MS.gene059052:CDS |
| CAGAGGAACTGGACTTATCA+AGG | 0.507213 | 2.4:-55913061 | MS.gene059052:CDS |
| GGACTTATCAAGGCCATTGA+GGG | 0.514208 | 2.4:-55913051 | MS.gene059052:CDS |
| GGATACAACTACAGCTTGGT+AGG | 0.525235 | 2.4:-55913237 | MS.gene059052:CDS |
| CTCTGGCCTTAGTTTCATCA+CGG | 0.532674 | 2.4:+55913079 | None:intergenic |
| TGCAGTCCGTGATGAAACTA+AGG | 0.533307 | 2.4:-55913085 | MS.gene059052:CDS |
| TGCCACGACGTAGCCCTCAA+TGG | 0.549026 | 2.4:+55913038 | None:intergenic |
| TTTGACTGTAATCTTAACAA+TGG | 0.571145 | 2.4:+55913140 | None:intergenic |
| TGGACTTATCAAGGCCATTG+AGG | 0.572485 | 2.4:-55913052 | MS.gene059052:CDS |
| GTTGAAGGAAATGGAGGACC+AGG | 0.585895 | 2.4:-55913875 | MS.gene059052:CDS |
| CAAATTAGATGCAGTAGATG+AGG | 0.587202 | 2.4:-55913268 | MS.gene059052:CDS |
| ATTGTGGCTGGCTCTGATGG+TGG | 0.588345 | 2.4:-55913165 | MS.gene059052:CDS |
| GCAGTAGATGAGGCAAACTT+GGG | 0.598362 | 2.4:-55913258 | MS.gene059052:CDS |
| GTAGAGTTTAGCTGGAGCCA+CGG | 0.602676 | 2.4:+55913967 | None:intergenic |
| TGCTGATGAAATCGTCCCAA+AGG | 0.606260 | 2.4:-55913927 | MS.gene059052:CDS |
| CTTGGTAGGAGGAACAGGGT+TGG | 0.609437 | 2.4:-55913223 | MS.gene059052:CDS |
| CTTGGGATACAACTACAGCT+TGG | 0.614144 | 2.4:-55913241 | MS.gene059052:CDS |
| AAGAAGTTATCCATGTCTGA+AGG | 0.619942 | 2.4:-55913845 | MS.gene059052:intron |
| GAAATTGTTGAAGGAAATGG+AGG | 0.626795 | 2.4:-55913881 | MS.gene059052:CDS |
| TACAACTACAGCTTGGTAGG+AGG | 0.632731 | 2.4:-55913234 | MS.gene059052:CDS |
| GGCCATTGAGGGCTACGTCG+TGG | 0.646344 | 2.4:-55913040 | MS.gene059052:CDS |
| TCTTAAATTACCTTCAGACA+TGG | 0.649758 | 2.4:+55913835 | None:intergenic |
| ACAGTCAAATACCACACCAA+AGG | 0.652327 | 2.4:-55913126 | MS.gene059052:CDS |
| GAGCTGCATCACCTTTGGTG+TGG | 0.654393 | 2.4:+55913115 | None:intergenic |
| CGTGATGAAACTAAGGCCAG+AGG | 0.688505 | 2.4:-55913078 | MS.gene059052:CDS |
| ACAGCTTGGTAGGAGGAACA+GGG | 0.710550 | 2.4:-55913227 | MS.gene059052:CDS |
| TGATGAACATGTATCAACCG+TGG | 0.718349 | 2.4:-55913984 | MS.gene059052:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATAAATAAATTATAA+TGG | - | chr2.4:55913700-55913719 | MS.gene059052:intron | 0.0% |
| !!! | AAATAAAAGTATAACATAAA+TGG | + | chr2.4:55913504-55913523 | None:intergenic | 10.0% |
| !!! | TTTGTCAATTTTTAAGTAAA+AGG | + | chr2.4:55913338-55913357 | None:intergenic | 15.0% |
| !!! | CACATGAATCATTTTTTTTA+AGG | + | chr2.4:55913600-55913619 | None:intergenic | 20.0% |
| !!! | GAATTTAACTTACTTTTCTT+TGG | + | chr2.4:55913428-55913447 | None:intergenic | 20.0% |
| ! | AATAGAATCTTGAGAAATGA+AGG | - | chr2.4:55913528-55913547 | MS.gene059052:intron | 25.0% |
| ! | ATAATTATTAGACATACTCC+TGG | + | chr2.4:55913574-55913593 | None:intergenic | 25.0% |
| ! | TGAATTCGAAACAAAAATTG+TGG | - | chr2.4:55913846-55913865 | MS.gene059052:CDS | 25.0% |
| ! | TTCAACAATTTCAACACTTT+GGG | + | chr2.4:55913138-55913157 | None:intergenic | 25.0% |
| ! | TTTGACTGTAATCTTAACAA+TGG | + | chr2.4:55913890-55913909 | None:intergenic | 25.0% |
| !! | AGGAGTATGTCTAATAATTA+TGG | - | chr2.4:55913573-55913592 | MS.gene059052:intron | 25.0% |
| AGACATGGATAACTTCTTAA+TGG | + | chr2.4:55913180-55913199 | None:intergenic | 30.0% | |
| CTTCAACAATTTCAACACTT+TGG | + | chr2.4:55913139-55913158 | None:intergenic | 30.0% | |
| GTTGAAATTGTTGAAGGAAA+TGG | - | chr2.4:55913143-55913162 | MS.gene059052:CDS | 30.0% | |
| TCTTAAATTACCTTCAGACA+TGG | + | chr2.4:55913195-55913214 | None:intergenic | 30.0% | |
| ! | TAATTTGTGTAGCACAAAGT+TGG | + | chr2.4:55913746-55913765 | None:intergenic | 30.0% |
| !! | CAAAGTGTTGAAATTGTTGA+AGG | - | chr2.4:55913137-55913156 | MS.gene059052:CDS | 30.0% |
| !! | TGTAAAATTGTTTTACACCG+AGG | - | chr2.4:55913270-55913289 | MS.gene059052:CDS | 30.0% |
| AAGAAGTTATCCATGTCTGA+AGG | - | chr2.4:55913182-55913201 | MS.gene059052:CDS | 35.0% | |
| ATAATACATAAGCTCGTTCC+AGG | - | chr2.4:55913553-55913572 | MS.gene059052:intron | 35.0% | |
| CAAATTAGATGCAGTAGATG+AGG | - | chr2.4:55913759-55913778 | MS.gene059052:intron | 35.0% | |
| GAAATTGTTGAAGGAAATGG+AGG | - | chr2.4:55913146-55913165 | MS.gene059052:CDS | 35.0% | |
| GATAACTTCTTAATGGTTCC+TGG | + | chr2.4:55913173-55913192 | None:intergenic | 35.0% | |
| TATAATGGCTGTATTGCAGA+TGG | - | chr2.4:55913715-55913734 | MS.gene059052:intron | 35.0% | |
| TTCGAAACAAAAATTGTGGC+TGG | - | chr2.4:55913850-55913869 | MS.gene059052:CDS | 35.0% | |
| ! | TACACAATTCTTTGTTGTGC+TGG | + | chr2.4:55913311-55913330 | None:intergenic | 35.0% |
| ACAGTCAAATACCACACCAA+AGG | - | chr2.4:55913901-55913920 | MS.gene059052:CDS | 40.0% | |
| CGTGACATATTGAAGAGTTG+TGG | - | chr2.4:55913363-55913382 | MS.gene059052:intron | 40.0% | |
| TGATGAACATGTATCAACCG+TGG | - | chr2.4:55913043-55913062 | MS.gene059052:CDS | 40.0% | |
| ! | AGAGCTTTGTAGAGTTTAGC+TGG | + | chr2.4:55913071-55913090 | None:intergenic | 40.0% |
| AGATAGAGCTGCATCACCTT+TGG | + | chr2.4:55913920-55913939 | None:intergenic | 45.0% | |
| CAGAGGAACTGGACTTATCA+AGG | - | chr2.4:55913966-55913985 | MS.gene059052:CDS | 45.0% | |
| CTTGATAAGTCCAGTTCCTC+TGG | + | chr2.4:55913968-55913987 | None:intergenic | 45.0% | |
| CTTGGGATACAACTACAGCT+TGG | - | chr2.4:55913786-55913805 | MS.gene059052:intron | 45.0% | |
| GCAGTAGATGAGGCAAACTT+GGG | - | chr2.4:55913769-55913788 | MS.gene059052:intron | 45.0% | |
| GGACTTATCAAGGCCATTGA+GGG | - | chr2.4:55913976-55913995 | MS.gene059052:CDS | 45.0% | |
| GGATACAACTACAGCTTGGT+AGG | - | chr2.4:55913790-55913809 | MS.gene059052:intron | 45.0% | |
| TACAACTACAGCTTGGTAGG+AGG | - | chr2.4:55913793-55913812 | MS.gene059052:intron | 45.0% | |
| TGCAGTAGATGAGGCAAACT+TGG | - | chr2.4:55913768-55913787 | MS.gene059052:intron | 45.0% | |
| TGCAGTCCGTGATGAAACTA+AGG | - | chr2.4:55913942-55913961 | MS.gene059052:CDS | 45.0% | |
| TGCTGATGAAATCGTCCCAA+AGG | - | chr2.4:55913100-55913119 | MS.gene059052:CDS | 45.0% | |
| TGGACTTATCAAGGCCATTG+AGG | - | chr2.4:55913975-55913994 | MS.gene059052:CDS | 45.0% | |
| !! | AAAATTGTGGCTGGCTCTGA+TGG | - | chr2.4:55913859-55913878 | MS.gene059052:CDS | 45.0% |
| !! | CTCTGGCCTTAGTTTCATCA+CGG | + | chr2.4:55913951-55913970 | None:intergenic | 45.0% |
| !! | GGCGAATTTTGATCGATCCT+CGG | + | chr2.4:55913290-55913309 | None:intergenic | 45.0% |
| ACAGCTTGGTAGGAGGAACA+GGG | - | chr2.4:55913800-55913819 | MS.gene059052:intron | 50.0% | |
| CGTGATGAAACTAAGGCCAG+AGG | - | chr2.4:55913949-55913968 | MS.gene059052:CDS | 50.0% | |
| GAAACTAAGGCCAGAGGAAC+TGG | - | chr2.4:55913955-55913974 | MS.gene059052:CDS | 50.0% | |
| GGGCAGCAGAAATCACCTTT+GGG | + | chr2.4:55913118-55913137 | None:intergenic | 50.0% | |
| GTAGAGTTTAGCTGGAGCCA+CGG | + | chr2.4:55913063-55913082 | None:intergenic | 50.0% | |
| GTTGAAGGAAATGGAGGACC+AGG | - | chr2.4:55913152-55913171 | MS.gene059052:CDS | 50.0% | |
| TACAGCTTGGTAGGAGGAAC+AGG | - | chr2.4:55913799-55913818 | MS.gene059052:intron | 50.0% | |
| TGGGCAGCAGAAATCACCTT+TGG | + | chr2.4:55913119-55913138 | None:intergenic | 50.0% | |
| CTTGGTAGGAGGAACAGGGT+TGG | - | chr2.4:55913804-55913823 | MS.gene059052:intron | 55.0% | |
| GAGCTGCATCACCTTTGGTG+TGG | + | chr2.4:55913915-55913934 | None:intergenic | 55.0% | |
| !! | ATTGTGGCTGGCTCTGATGG+TGG | - | chr2.4:55913862-55913881 | MS.gene059052:CDS | 55.0% |
| TGCCACGACGTAGCCCTCAA+TGG | + | chr2.4:55913992-55914011 | None:intergenic | 60.0% | |
| GGCCATTGAGGGCTACGTCG+TGG | - | chr2.4:55913987-55914006 | MS.gene059052:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 55913023 | 55914026 | 55913023 | ID=MS.gene059052 |
| chr2.4 | mRNA | 55913023 | 55914026 | 55913023 | ID=MS.gene059052.t1;Parent=MS.gene059052 |
| chr2.4 | exon | 55913846 | 55914026 | 55913846 | ID=MS.gene059052.t1.exon1;Parent=MS.gene059052.t1 |
| chr2.4 | CDS | 55913846 | 55914026 | 55913846 | ID=cds.MS.gene059052.t1;Parent=MS.gene059052.t1 |
| chr2.4 | exon | 55913023 | 55913315 | 55913023 | ID=MS.gene059052.t1.exon2;Parent=MS.gene059052.t1 |
| chr2.4 | CDS | 55913023 | 55913315 | 55913023 | ID=cds.MS.gene059052.t1;Parent=MS.gene059052.t1 |
| Gene Sequence |
| Protein sequence |
