AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38536

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38536.t1 MTR_3g031220 91.634 514 34 3 1 511 1 508 0.0 906
MS.gene38536.t1 MTR_3g031220 93.506 385 22 2 1 382 1 385 0.0 688
MS.gene38536.t1 MTR_3g031220 54.054 74 29 2 353 422 185 257 8.69e-17 82.8
MS.gene38536.t1 MTR_5g074400 56.814 565 170 16 1 510 35 580 5.49e-167 485
MS.gene38536.t1 MTR_7g071120 48.542 480 178 21 85 511 29 492 5.94e-121 364
MS.gene38536.t1 MTR_4g013260 45.763 472 205 14 61 510 47 489 4.67e-106 326
MS.gene38536.t1 MTR_5g094430 44.076 422 180 10 40 426 28 428 5.88e-94 296
MS.gene38536.t1 MTR_5g094430 49.351 77 36 2 362 438 200 273 1.12e-13 73.9
MS.gene38536.t1 MTR_3g056100 43.371 445 178 14 40 424 47 477 4.83e-92 293
MS.gene38536.t1 MTR_3g056100 40.650 123 62 4 183 299 406 523 2.05e-17 85.9
MS.gene38536.t1 MTR_3g056100 43.418 433 182 12 40 424 47 464 5.97e-92 292
MS.gene38536.t1 MTR_3g056100 40.650 123 62 4 183 299 393 510 2.35e-17 85.5
MS.gene38536.t1 MTR_3g056100 58.547 234 86 3 193 424 96 320 2.97e-85 270
MS.gene38536.t1 MTR_3g056100 40.650 123 62 4 183 299 249 366 1.48e-17 85.5
MS.gene38536.t1 MTR_3g056100 57.724 246 82 5 193 424 96 333 3.36e-85 270
MS.gene38536.t1 MTR_3g056100 40.650 123 62 4 183 299 262 379 1.45e-17 85.5
MS.gene38536.t1 MTR_5g094430 60.256 234 87 3 195 426 65 294 5.39e-84 266
MS.gene38536.t1 MTR_5g094430 52.000 75 31 2 183 256 221 291 1.15e-16 82.4
MS.gene38536.t1 MTR_5g094430 49.351 77 36 2 362 438 66 139 1.03e-13 73.6
MS.gene38536.t1 MTR_5g094430 60.256 234 87 3 195 426 87 316 7.62e-84 266
MS.gene38536.t1 MTR_5g094430 52.000 75 31 2 183 256 243 313 1.23e-16 82.4
MS.gene38536.t1 MTR_5g094430 49.351 77 36 2 362 438 88 161 9.20e-14 73.6
MS.gene38536.t1 MTR_5g042920 51.648 273 122 5 185 451 140 408 2.94e-82 262
MS.gene38536.t1 MTR_7g011820 40.385 416 190 11 41 430 95 478 1.28e-80 261
MS.gene38536.t1 MTR_7g011820 46.875 96 33 3 362 457 228 305 1.22e-15 80.1
MS.gene38536.t1 MTR_7g011820 47.727 88 41 2 183 269 401 484 1.41e-15 79.7
MS.gene38536.t1 MTR_7g080000 39.726 438 190 11 52 424 66 494 4.23e-78 259
MS.gene38536.t1 MTR_4g082580 51.489 235 79 4 191 424 140 340 6.23e-74 239
MS.gene38536.t1 MTR_7g100510 51.064 235 109 2 193 421 186 420 7.53e-73 238
MS.gene38536.t1 MTR_7g100510 48.649 74 37 1 197 269 362 435 2.12e-14 75.9
MS.gene38536.t1 MTR_7g080020 41.758 364 145 8 192 491 276 636 7.54e-73 246
MS.gene38536.t1 MTR_5g097490 40.892 269 130 5 183 440 80 330 5.00e-57 195
MS.gene38536.t1 MTR_3g009470 73.832 107 25 1 320 426 456 559 5.06e-47 174
MS.gene38536.t1 MTR_3g009470 42.437 238 95 8 60 259 110 343 3.75e-38 149
MS.gene38536.t1 MTR_3g009470 54.430 79 34 2 362 439 280 357 8.49e-16 80.9
MS.gene38536.t1 MTR_3g009470 54.545 77 26 3 183 256 486 556 2.29e-15 79.3
MS.gene38536.t1 MTR_4g130900 40.741 243 125 6 195 424 185 421 7.63e-45 165
MS.gene38536.t1 MTR_4g130900 42.718 103 58 1 195 296 358 460 1.10e-16 83.2
MS.gene38536.t1 MTR_3g009470 42.437 238 95 8 60 259 110 343 1.34e-38 148
MS.gene38536.t1 MTR_3g009470 66.667 63 18 1 320 382 456 515 1.07e-19 92.4
MS.gene38536.t1 MTR_3g009470 54.430 79 34 2 362 439 280 357 4.48e-16 81.3
MS.gene38536.t1 MTR_5g097500 31.878 229 137 4 197 425 84 293 4.27e-35 134
MS.gene38536.t1 MTR_1g077780 65.476 84 29 0 338 421 38 121 2.18e-33 124
MS.gene38536.t1 MTR_1g077780 38.614 101 50 3 185 280 47 140 9.68e-16 74.7
MS.gene38536.t1 MTR_8g007270 67.105 76 25 0 343 418 135 210 4.17e-31 120
MS.gene38536.t1 MTR_8g007270 52.113 71 29 2 182 251 144 210 1.88e-16 79.0
MS.gene38536.t1 MTR_5g074200 48.889 135 62 4 170 298 194 327 4.05e-29 117
MS.gene38536.t1 MTR_5g074200 48.148 81 38 2 362 439 220 299 2.74e-15 77.4
MS.gene38536.t1 MTR_3g095080 64.865 74 26 0 345 418 151 224 4.93e-29 115
MS.gene38536.t1 MTR_3g095080 47.887 71 32 2 182 251 158 224 1.11e-14 74.3
MS.gene38536.t1 MTR_3g095080 64.865 74 26 0 345 418 127 200 5.10e-29 114
MS.gene38536.t1 MTR_3g095080 47.887 71 32 2 182 251 134 200 1.43e-14 73.6
MS.gene38536.t1 MTR_7g109800 46.774 124 60 2 346 465 129 250 1.24e-27 112
MS.gene38536.t1 MTR_7g109800 46.316 95 45 3 196 287 145 236 8.30e-17 81.3
MS.gene38536.t1 MTR_8g092140 64.000 75 26 1 345 418 142 216 1.51e-27 110
MS.gene38536.t1 MTR_8g092140 56.140 57 24 1 196 251 160 216 1.17e-14 73.9
MS.gene38536.t1 MTR_2g033820 37.368 190 87 3 346 504 187 375 9.17e-27 112
MS.gene38536.t1 MTR_2g033820 48.052 77 39 1 196 271 203 279 5.72e-16 80.1
MS.gene38536.t1 MTR_1g015140 61.842 76 28 1 343 418 84 158 2.22e-26 105
MS.gene38536.t1 MTR_1g015140 47.222 72 33 2 182 252 92 159 1.10e-15 75.1
MS.gene38536.t1 MTR_5g043880 57.647 85 35 1 341 424 103 187 3.18e-26 108
MS.gene38536.t1 MTR_5g043880 40.196 102 56 2 151 251 83 180 1.75e-13 71.2
MS.gene38536.t1 MTR_5g091390 62.667 75 28 0 348 422 143 217 6.43e-26 108
MS.gene38536.t1 MTR_5g091390 52.239 67 31 1 196 261 157 223 3.23e-14 73.9
MS.gene38536.t1 MTR_3g104750 52.381 84 40 0 335 418 77 160 6.92e-26 103
MS.gene38536.t1 MTR_3g104750 47.222 72 33 2 182 252 94 161 2.60e-15 73.9
MS.gene38536.t1 MTR_8g096730 56.250 80 35 0 341 420 49 128 8.52e-26 103
MS.gene38536.t1 MTR_8g096730 50.000 72 31 2 182 252 60 127 1.77e-17 79.7
MS.gene38536.t1 MTR_1g086790 47.573 103 54 0 346 448 142 244 8.79e-26 108
MS.gene38536.t1 MTR_1g086790 39.655 116 50 4 183 284 141 250 9.91e-16 78.6
MS.gene38536.t1 MTR_7g079010 55.172 87 39 0 332 418 111 197 9.19e-26 105
MS.gene38536.t1 MTR_7g079010 58.621 58 23 1 196 252 141 198 2.18e-15 75.9
MS.gene38536.t1 MTR_4g094588 61.333 75 29 0 348 422 164 238 1.21e-25 108
MS.gene38536.t1 MTR_4g094588 46.809 94 49 1 196 288 178 271 4.65e-19 89.0
MS.gene38536.t1 MTR_7g028415 52.809 89 39 1 353 441 84 169 9.89e-25 101
MS.gene38536.t1 MTR_7g028415 50.000 72 31 2 182 252 83 150 1.57e-15 75.1
MS.gene38536.t1 MTR_7g028710 52.809 89 39 1 353 441 84 169 9.89e-25 101
MS.gene38536.t1 MTR_7g028710 50.000 72 31 2 182 252 83 150 1.57e-15 75.1
MS.gene38536.t1 MTR_4g132430 54.430 79 35 1 344 421 109 187 2.17e-24 104
MS.gene38536.t1 MTR_4g132430 38.889 90 49 3 173 256 100 189 4.66e-13 70.9
MS.gene38536.t1 MTR_3g053330 47.727 88 45 1 335 421 224 311 2.52e-24 106
MS.gene38536.t1 MTR_3g053330 38.202 89 53 2 197 283 252 340 3.48e-13 72.0
MS.gene38536.t1 MTR_4g107970 53.846 78 35 1 345 421 161 238 3.19e-24 106
MS.gene38536.t1 MTR_4g107970 50.000 62 29 2 196 255 178 239 4.73e-13 72.0
MS.gene38536.t1 MTR_4g107970 53.846 78 35 1 345 421 238 315 4.36e-24 106
MS.gene38536.t1 MTR_4g107970 50.000 62 29 2 196 255 255 316 6.20e-13 71.6
MS.gene38536.t1 MTR_2g023930 54.430 79 35 1 344 421 287 365 5.50e-24 105
MS.gene38536.t1 MTR_8g092010 54.795 73 33 0 349 421 95 167 5.88e-24 99.4
MS.gene38536.t1 MTR_8g092010 45.946 74 35 2 182 254 98 167 9.00e-14 70.1
MS.gene38536.t1 MTR_4g094412 55.128 78 34 1 346 422 218 295 8.05e-24 104
MS.gene38536.t1 MTR_4g094412 53.226 62 27 2 197 256 235 296 1.01e-14 77.0
MS.gene38536.t1 MTR_4g094412 55.128 78 34 1 346 422 227 304 8.11e-24 104
MS.gene38536.t1 MTR_4g094412 53.226 62 27 2 197 256 244 305 1.09e-14 76.6
MS.gene38536.t1 MTR_4g132430 54.430 79 35 1 344 421 243 321 1.09e-23 104
MS.gene38536.t1 MTR_4g132430 38.889 90 49 3 173 256 234 323 9.16e-13 70.9
MS.gene38536.t1 MTR_2g088000 54.430 79 35 1 344 421 331 409 1.37e-23 104
MS.gene38536.t1 MTR_2g088000 39.759 83 48 2 196 276 349 431 7.02e-12 68.2
MS.gene38536.t1 MTR_7g110720 39.695 131 70 3 308 437 143 265 1.76e-23 102
MS.gene38536.t1 MTR_7g110720 43.421 76 41 2 197 270 190 265 6.33e-14 73.9
MS.gene38536.t1 MTR_4g122530 53.488 86 40 0 346 431 192 277 2.38e-23 102
MS.gene38536.t1 MTR_4g122530 57.377 61 25 1 196 255 208 268 7.74e-15 77.0
MS.gene38536.t1 MTR_7g110720 40.000 130 69 3 309 437 171 292 3.10e-23 102
MS.gene38536.t1 MTR_7g110720 43.421 76 41 2 197 270 217 292 8.19e-14 73.9
MS.gene38536.t1 MTR_3g095040 54.667 75 34 0 348 422 104 178 5.14e-23 97.4
MS.gene38536.t1 MTR_3g095040 45.333 75 36 2 182 255 108 178 1.80e-13 69.7
MS.gene38536.t1 MTR_1g009613 42.069 145 72 4 280 422 189 323 1.51e-22 99.0
MS.gene38536.t1 MTR_1g009613 48.571 70 34 2 197 264 263 332 2.23e-12 68.6
MS.gene38536.t1 MTR_7g009730 54.667 75 33 1 345 418 202 276 2.03e-22 101
MS.gene38536.t1 MTR_7g009730 44.872 78 37 3 196 271 219 292 5.31e-13 71.6
MS.gene38536.t1 MTR_2g045360 44.915 118 59 4 330 441 178 295 3.41e-22 99.4
MS.gene38536.t1 MTR_2g045360 45.205 73 38 2 197 267 212 284 9.25e-12 67.4
MS.gene38536.t1 MTR_4g049760 43.564 101 56 1 323 422 251 351 7.63e-22 99.4
MS.gene38536.t1 MTR_4g049760 30.469 128 83 3 149 270 239 366 1.42e-12 70.5
MS.gene38536.t1 MTR_4g094908 43.636 110 46 3 318 426 237 331 9.65e-22 96.7
MS.gene38536.t1 MTR_4g094908 50.000 66 31 2 197 260 267 332 4.42e-14 73.9
MS.gene38536.t1 MTR_4g049790 45.263 95 51 1 329 422 279 373 2.09e-21 97.8
MS.gene38536.t1 MTR_4g049790 34.127 126 77 3 151 270 263 388 3.37e-15 78.6
MS.gene38536.t1 MTR_3g106060 54.795 73 30 3 349 418 123 195 1.62e-20 92.4
MS.gene38536.t1 MTR_3g106060 50.877 57 26 2 197 251 139 195 1.07e-13 72.0
MS.gene38536.t1 MTR_5g016610 53.165 79 36 1 343 420 180 258 2.35e-20 91.3
MS.gene38536.t1 MTR_5g016610 54.386 57 24 2 197 251 200 256 3.05e-13 70.5
MS.gene38536.t1 MTR_7g062220 64.912 57 20 0 362 418 124 180 3.11e-20 92.0
MS.gene38536.t1 MTR_7g062220 59.649 57 22 1 196 251 124 180 1.89e-14 74.7
MS.gene38536.t1 MTR_1g078260 56.338 71 30 1 349 418 234 304 4.43e-20 93.6
MS.gene38536.t1 MTR_1g078260 46.154 78 39 3 196 271 247 323 3.53e-12 68.9
MS.gene38536.t1 MTR_6g086555 54.667 75 33 1 348 421 192 266 7.60e-20 92.0
MS.gene38536.t1 MTR_6g086555 43.421 76 41 2 187 260 197 272 1.14e-12 70.1
MS.gene38536.t1 MTR_4g127040 47.368 95 44 3 342 435 228 317 1.55e-19 89.7
MS.gene38536.t1 MTR_4g127040 46.032 63 32 2 197 257 246 308 3.53e-11 64.7
MS.gene38536.t1 MTR_4g007060 43.396 106 45 4 360 450 126 231 3.75e-19 88.2
MS.gene38536.t1 MTR_4g007060 53.333 60 26 2 197 254 129 188 1.95e-15 77.0
MS.gene38536.t1 MTR_4g007060 43.396 106 45 4 360 450 160 265 5.17e-19 88.2
MS.gene38536.t1 MTR_4g007060 53.333 60 26 2 197 254 163 222 2.51e-15 77.4
MS.gene38536.t1 MTR_6g046600 67.241 58 19 0 212 269 18 75 5.67e-19 83.2
MS.gene38536.t1 MTR_2g105060 30.052 193 88 5 277 422 38 230 8.00e-19 87.8
MS.gene38536.t1 MTR_2g105060 50.000 60 28 2 197 254 170 229 7.05e-14 73.2
MS.gene38536.t1 MTR_2g105060 38.182 110 52 2 329 422 46 155 2.05e-18 85.1
MS.gene38536.t1 MTR_2g105060 50.000 60 28 2 197 254 95 154 5.81e-14 72.0
MS.gene38536.t1 MTR_1g013790 40.206 97 45 3 360 446 99 192 5.03e-18 84.3
MS.gene38536.t1 MTR_1g013790 41.975 81 45 2 197 275 102 182 2.44e-13 70.5
MS.gene38536.t1 MTR_1g013760 47.945 73 35 2 349 418 125 197 1.16e-17 84.0
MS.gene38536.t1 MTR_1g013760 50.877 57 26 2 197 251 141 197 5.23e-13 70.1
MS.gene38536.t1 MTR_1g070455 50.000 78 38 1 342 418 273 350 1.25e-17 84.7
MS.gene38536.t1 MTR_1g070455 54.237 59 25 2 197 253 294 352 4.68e-13 70.9
MS.gene38536.t1 MTR_3g108960 48.101 79 40 1 342 419 294 372 1.62e-16 82.0
MS.gene38536.t1 MTR_8g087000 46.667 75 39 1 363 436 78 152 3.97e-16 78.6
MS.gene38536.t1 MTR_8g087000 38.710 93 52 4 197 286 78 168 9.59e-13 68.6
MS.gene38536.t1 MTR_8g087000 46.667 75 39 1 363 436 77 151 4.81e-16 78.2
MS.gene38536.t1 MTR_8g087000 38.710 93 52 4 197 286 77 167 1.13e-12 68.2
MS.gene38536.t1 MTR_4g047580 39.130 92 55 1 332 422 251 342 5.87e-16 80.9
MS.gene38536.t1 MTR_2g016770 44.944 89 37 2 363 450 36 113 6.97e-16 77.0
MS.gene38536.t1 MTR_2g016770 40.909 110 52 6 197 301 36 137 1.06e-12 67.8
MS.gene38536.t1 MTR_2g016770 44.944 89 37 2 363 450 28 105 9.17e-16 76.6
MS.gene38536.t1 MTR_2g016770 40.909 110 52 6 197 301 28 129 1.25e-12 67.4
MS.gene38536.t1 MTR_2g024350 56.250 64 26 2 197 258 9 72 1.36e-15 76.6
MS.gene38536.t1 MTR_2g024350 54.098 61 27 1 363 422 9 69 6.64e-15 74.3
MS.gene38536.t1 MTR_7g109600 45.000 80 43 1 363 441 54 133 2.70e-15 76.3
MS.gene38536.t1 MTR_7g109600 46.250 80 34 3 197 274 54 126 4.88e-14 72.8
MS.gene38536.t1 MTR_2g083870 50.794 63 30 1 363 424 81 143 2.82e-15 76.3
MS.gene38536.t1 MTR_8g028565 46.512 86 44 2 363 446 156 241 3.80e-15 77.0
MS.gene38536.t1 MTR_1g099600 42.353 85 47 2 343 426 167 250 5.12e-15 76.3
MS.gene38536.t1 MTR_1g099600 39.506 81 43 3 195 273 184 260 6.73e-11 63.9
MS.gene38536.t1 MTR_8g067650 47.423 97 37 5 172 261 316 405 7.09e-15 77.4
MS.gene38536.t1 MTR_8g067650 39.535 86 51 1 338 422 315 400 2.37e-12 69.7
MS.gene38536.t1 MTR_2g024380 56.250 64 26 2 197 258 252 315 9.98e-15 77.0
MS.gene38536.t1 MTR_2g024380 40.909 88 51 1 336 422 225 312 3.82e-14 75.1
MS.gene38536.t1 MTR_0117s0040 48.052 77 37 2 343 418 57 131 1.13e-14 74.3
MS.gene38536.t1 MTR_0117s0040 46.269 67 31 3 190 251 65 131 9.03e-11 62.8
MS.gene38536.t1 MTR_8g067635 35.542 166 87 8 110 261 256 415 1.36e-14 76.6
MS.gene38536.t1 MTR_8g067635 40.698 86 50 1 338 422 325 410 1.78e-12 70.1
MS.gene38536.t1 MTR_8g098945 45.946 74 39 1 361 433 128 201 3.67e-14 73.2
MS.gene38536.t1 MTR_8g098945 45.833 72 35 3 197 266 130 199 2.55e-12 67.8
MS.gene38536.t1 MTR_7g079040 46.429 84 42 3 363 443 155 238 1.55e-13 72.0
MS.gene38536.t1 MTR_7g079040 27.966 236 147 8 109 337 65 284 4.20e-11 64.7
MS.gene38536.t1 MTR_1g077760 60.000 45 18 0 338 382 90 134 1.83e-13 67.8
MS.gene38536.t1 MTR_2g032030 47.692 65 33 1 363 426 268 332 2.58e-13 72.4
MS.gene38536.t1 MTR_2g032030 47.692 65 33 1 363 426 268 332 3.32e-13 72.0
MS.gene38536.t1 MTR_5g093540 40.602 133 51 7 174 298 137 249 6.98e-13 68.9
MS.gene38536.t1 MTR_8g069935 48.649 74 33 3 195 266 330 400 1.69e-12 69.7
MS.gene38536.t1 MTR_8g069935 43.548 62 34 1 362 422 331 392 2.57e-11 66.2
MS.gene38536.t1 MTR_5g067680 40.625 96 42 5 186 276 192 277 1.79e-12 69.3
MS.gene38536.t1 MTR_5g067680 46.552 58 28 1 362 416 202 259 7.40e-11 64.3
MS.gene38536.t1 MTR_3g095080 65.000 40 14 0 345 384 151 190 2.68e-12 66.2
MS.gene38536.t1 MTR_3g090860 51.724 58 24 2 196 249 133 190 4.96e-12 67.8
MS.gene38536.t1 MTR_3g090860 49.153 59 27 1 361 416 132 190 2.05e-11 65.9
MS.gene38536.t1 MTR_8g099350 51.724 58 24 2 196 249 132 189 6.39e-12 67.4
MS.gene38536.t1 MTR_4g021780 44.156 77 38 2 178 254 9 80 1.20e-11 62.4
MS.gene38536.t1 MTR_6g038890 55.556 45 20 0 344 388 170 214 1.30e-11 64.7
MS.gene38536.t1 MTR_4g007060 50.000 54 26 1 360 412 160 213 3.84e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38536.t1 AT2G38470 44.689 499 199 15 51 510 58 518 1.09e-108 333
MS.gene38536.t1 AT5G07100 48.219 365 91 10 62 424 28 296 1.43e-93 287
MS.gene38536.t1 AT2G03340 44.081 397 192 8 39 428 108 481 3.06e-92 291
MS.gene38536.t1 AT2G03340 60.000 70 27 1 362 431 250 318 1.48e-19 92.0
MS.gene38536.t1 AT4G26640 43.182 440 176 11 40 431 37 450 8.60e-91 288
MS.gene38536.t1 AT4G26640 43.721 430 173 11 51 431 1 410 2.02e-90 286
MS.gene38536.t1 AT2G30250 45.977 435 173 14 1 421 1 387 4.86e-90 281
MS.gene38536.t1 AT2G30250 55.385 65 28 1 197 260 329 393 8.70e-16 79.7
MS.gene38536.t1 AT4G26640 56.911 246 92 4 195 431 34 274 8.45e-87 272
MS.gene38536.t1 AT4G26640 56.911 246 92 4 195 431 34 274 8.45e-87 272
MS.gene38536.t1 AT4G26640 56.911 246 92 4 195 431 34 274 8.45e-87 272
MS.gene38536.t1 AT4G26640 56.911 246 92 4 195 431 34 274 8.45e-87 272
MS.gene38536.t1 AT4G26640 56.504 246 93 3 195 431 138 378 5.12e-86 274
MS.gene38536.t1 AT5G07100 59.833 239 43 7 189 424 15 203 1.74e-83 258
MS.gene38536.t1 AT5G07100 59.833 239 43 7 189 424 15 203 1.74e-83 258
MS.gene38536.t1 AT5G07100 59.833 239 43 7 189 424 15 203 1.74e-83 258
MS.gene38536.t1 AT5G07100 59.833 239 43 7 189 424 15 203 1.74e-83 258
MS.gene38536.t1 AT1G13960 42.716 405 171 11 39 421 103 468 1.87e-83 268
MS.gene38536.t1 AT1G13960 52.273 88 27 2 355 428 208 294 8.09e-19 89.7
MS.gene38536.t1 AT1G13960 54.508 244 91 3 195 421 75 315 1.92e-80 255
MS.gene38536.t1 AT1G13960 52.273 88 27 2 355 428 55 141 6.26e-19 89.0
MS.gene38536.t1 AT3G01080 55.947 227 73 4 195 421 166 365 5.21e-73 238
MS.gene38536.t1 AT3G01080 55.947 227 73 4 195 421 204 403 6.67e-73 239
MS.gene38536.t1 AT4G26440 36.957 460 187 14 67 476 88 494 2.03e-71 238
MS.gene38536.t1 AT2G04880 46.341 246 116 6 190 424 105 345 1.31e-62 212
MS.gene38536.t1 AT2G04880 51.389 72 34 1 197 267 284 355 5.42e-15 77.8
MS.gene38536.t1 AT2G37260 46.512 258 96 5 193 420 82 327 1.09e-59 201
MS.gene38536.t1 AT2G37260 46.512 258 96 5 193 420 80 325 1.21e-59 201
MS.gene38536.t1 AT2G37260 46.512 258 96 5 193 420 162 407 6.11e-59 201
MS.gene38536.t1 AT2G04880 41.852 270 117 8 190 424 105 369 1.72e-58 201
MS.gene38536.t1 AT2G04880 48.750 80 40 1 189 267 300 379 5.24e-15 77.8
MS.gene38536.t1 AT4G30935 41.631 233 123 8 197 424 169 393 7.80e-49 175
MS.gene38536.t1 AT5G56270 74.510 102 24 1 323 424 450 549 1.04e-45 170
MS.gene38536.t1 AT5G56270 39.013 223 103 7 67 259 117 336 5.18e-30 124
MS.gene38536.t1 AT5G56270 55.844 77 25 3 183 256 478 548 3.14e-16 82.4
MS.gene38536.t1 AT5G56270 59.677 62 24 1 362 423 273 333 5.77e-16 81.3
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 3.34e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.15e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 3.34e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.15e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 3.75e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.27e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 3.75e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.27e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 3.83e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.38e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 3.97e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.32e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 4.14e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.35e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 4.77e-45 171
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.42e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 4.95e-45 170
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 3.47e-12 70.1
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 396 594 5.18e-45 170
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 400 459 3.76e-12 69.7
MS.gene38536.t1 AT4G12020 47.115 208 85 5 191 382 463 661 5.32e-45 170
MS.gene38536.t1 AT4G12020 52.459 61 28 1 361 421 467 526 4.32e-12 69.3
MS.gene38536.t1 AT2G44745 67.105 76 25 0 343 418 126 201 1.92e-31 121
MS.gene38536.t1 AT2G44745 52.113 71 29 2 182 251 135 201 1.47e-16 79.3
MS.gene38536.t1 AT4G18170 52.727 110 45 2 319 421 122 231 1.59e-28 115
MS.gene38536.t1 AT4G18170 47.436 78 36 2 183 255 155 232 1.87e-15 77.8
MS.gene38536.t1 AT4G39410 64.474 76 27 0 343 418 204 279 2.25e-28 115
MS.gene38536.t1 AT4G39410 42.424 99 47 4 182 279 213 302 1.70e-15 77.8
MS.gene38536.t1 AT1G29860 64.935 77 27 0 346 422 120 196 1.60e-27 112
MS.gene38536.t1 AT1G29860 58.333 60 24 1 196 254 136 195 3.43e-15 76.6
MS.gene38536.t1 AT1G55600 60.714 84 32 1 338 421 284 366 2.53e-27 115
MS.gene38536.t1 AT1G55600 54.430 79 30 2 184 256 290 368 6.55e-17 84.0
MS.gene38536.t1 AT5G49520 64.198 81 28 1 346 425 205 285 5.37e-27 113
MS.gene38536.t1 AT5G49520 50.000 72 35 1 196 266 221 292 2.91e-15 78.2
MS.gene38536.t1 AT1G69310 58.140 86 35 1 341 425 126 211 7.65e-27 110
MS.gene38536.t1 AT1G69310 47.222 72 33 2 185 251 132 203 5.66e-13 70.1
MS.gene38536.t1 AT1G69310 58.140 86 35 1 341 425 126 211 7.65e-27 110
MS.gene38536.t1 AT1G69310 47.222 72 33 2 185 251 132 203 5.66e-13 70.1
MS.gene38536.t1 AT1G69310 58.140 86 35 1 341 425 126 211 7.65e-27 110
MS.gene38536.t1 AT1G69310 47.222 72 33 2 185 251 132 203 5.66e-13 70.1
MS.gene38536.t1 AT1G64000 58.750 80 33 0 339 418 91 170 8.13e-27 107
MS.gene38536.t1 AT1G64000 56.897 58 24 1 196 252 114 171 6.22e-16 76.6
MS.gene38536.t1 AT3G01970 56.471 85 37 0 349 433 52 136 1.99e-26 105
MS.gene38536.t1 AT3G01970 50.704 71 30 2 182 251 55 121 2.08e-14 70.9
MS.gene38536.t1 AT4G04450 41.985 131 62 3 336 465 172 289 8.62e-26 110
MS.gene38536.t1 AT4G04450 43.421 76 41 2 197 270 199 274 1.24e-13 73.2
MS.gene38536.t1 AT5G26170 60.000 70 28 0 349 418 100 169 1.33e-25 103
MS.gene38536.t1 AT5G26170 47.887 71 32 2 182 251 103 169 1.87e-16 77.8
MS.gene38536.t1 AT3G01080 64.384 73 25 1 195 267 204 275 1.40e-25 107
MS.gene38536.t1 AT3G01080 55.224 67 29 1 362 428 205 270 1.01e-15 78.6
MS.gene38536.t1 AT5G13080 61.111 72 28 0 349 420 54 125 1.69e-25 102
MS.gene38536.t1 AT5G13080 51.389 72 30 2 182 252 57 124 1.76e-17 79.7
MS.gene38536.t1 AT5G41570 59.211 76 31 0 343 418 79 154 2.53e-25 103
MS.gene38536.t1 AT5G41570 40.404 99 50 3 159 252 61 155 1.31e-16 78.2
MS.gene38536.t1 AT5G46350 57.500 80 34 0 348 427 169 248 3.58e-25 106
MS.gene38536.t1 AT5G46350 37.692 130 67 5 186 310 169 289 4.07e-15 77.0
MS.gene38536.t1 AT4G04450 41.985 131 62 3 336 465 266 383 3.98e-25 109
MS.gene38536.t1 AT4G04450 32.847 137 86 4 140 270 232 368 1.66e-13 73.2
MS.gene38536.t1 AT5G15130 55.128 78 34 1 345 421 168 245 6.39e-25 108
MS.gene38536.t1 AT5G15130 33.628 113 69 3 161 271 150 258 7.89e-13 71.2
MS.gene38536.t1 AT5G15130 55.128 78 34 1 345 421 210 287 8.19e-25 108
MS.gene38536.t1 AT5G15130 33.628 113 69 3 161 271 192 300 8.35e-13 71.2
MS.gene38536.t1 AT2G46130 53.571 84 39 0 335 418 3 86 8.30e-25 99.4
MS.gene38536.t1 AT2G46130 58.621 58 23 1 196 252 30 87 8.78e-16 73.9
MS.gene38536.t1 AT2G47260 59.211 76 31 0 346 421 158 233 1.06e-24 105
MS.gene38536.t1 AT2G47260 34.375 128 78 3 167 292 149 272 7.06e-14 73.2
MS.gene38536.t1 AT5G64810 59.155 71 29 0 349 419 97 167 1.23e-24 101
MS.gene38536.t1 AT5G64810 33.835 133 66 5 120 251 55 166 5.96e-14 70.9
MS.gene38536.t1 AT4G22070 52.874 87 40 1 336 421 271 357 2.54e-24 106
MS.gene38536.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.50e-13 71.2
MS.gene38536.t1 AT4G22070 52.874 87 40 1 336 421 271 357 2.54e-24 106
MS.gene38536.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.50e-13 71.2
MS.gene38536.t1 AT4G22070 52.874 87 40 1 336 421 271 357 2.54e-24 106
MS.gene38536.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.50e-13 71.2
MS.gene38536.t1 AT4G22070 52.874 87 40 1 336 421 271 357 2.54e-24 106
MS.gene38536.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.50e-13 71.2
MS.gene38536.t1 AT1G68150 53.409 88 37 2 336 422 212 296 3.08e-24 104
MS.gene38536.t1 AT1G68150 40.741 108 55 3 197 295 236 343 2.24e-15 78.2
MS.gene38536.t1 AT1G62300 55.696 79 34 1 344 421 294 372 8.45e-24 105
MS.gene38536.t1 AT1G62300 30.726 179 102 5 116 276 232 406 1.02e-13 73.9
MS.gene38536.t1 AT1G18860 52.564 78 36 1 345 421 222 299 2.40e-22 100
MS.gene38536.t1 AT1G18860 50.820 61 28 2 196 254 239 299 7.50e-12 68.2
MS.gene38536.t1 AT4G01720 55.844 77 33 1 346 421 223 299 2.43e-22 100
MS.gene38536.t1 AT4G01720 50.820 61 28 2 196 254 239 299 1.29e-12 70.5
MS.gene38536.t1 AT1G69310 54.651 86 34 2 341 425 126 207 4.53e-22 96.7
MS.gene38536.t1 AT2G23320 51.899 79 34 2 343 420 224 299 8.75e-21 93.6
MS.gene38536.t1 AT2G23320 56.140 57 23 2 197 251 241 297 5.41e-13 70.5
MS.gene38536.t1 AT4G24240 49.438 89 44 1 342 429 261 349 1.46e-20 93.6
MS.gene38536.t1 AT4G24240 56.140 57 23 2 197 251 282 338 1.24e-13 72.8
MS.gene38536.t1 AT4G31550 56.410 78 30 2 343 419 230 304 1.81e-20 92.8
MS.gene38536.t1 AT4G31550 57.895 57 22 2 197 251 247 303 7.68e-14 73.2
MS.gene38536.t1 AT4G31550 56.410 78 30 2 343 419 229 303 1.91e-20 92.8
MS.gene38536.t1 AT4G31550 57.895 57 22 2 197 251 246 302 7.68e-14 73.2
MS.gene38536.t1 AT3G62340 55.263 76 34 0 346 421 102 177 2.13e-20 91.7
MS.gene38536.t1 AT3G62340 48.000 75 34 2 186 255 104 178 3.63e-14 73.2
MS.gene38536.t1 AT2G24570 57.692 78 29 2 342 418 226 300 2.88e-20 92.0
MS.gene38536.t1 AT2G24570 50.704 71 33 2 197 265 244 314 4.76e-14 73.6
MS.gene38536.t1 AT2G46130 50.000 84 38 1 335 418 3 82 4.26e-20 85.9
MS.gene38536.t1 AT2G46130 53.448 58 22 2 196 252 30 83 3.12e-11 60.8
MS.gene38536.t1 AT2G21900 50.667 75 34 1 351 422 95 169 2.36e-19 86.7
MS.gene38536.t1 AT2G21900 34.188 117 67 3 147 254 53 168 6.20e-14 71.2
MS.gene38536.t1 AT5G28650 51.948 77 36 1 343 418 243 319 4.54e-19 89.0
MS.gene38536.t1 AT5G28650 48.438 64 31 2 197 258 263 326 9.99e-12 66.6
MS.gene38536.t1 AT1G80840 50.000 70 34 1 360 428 144 213 5.93e-19 87.8
MS.gene38536.t1 AT1G80840 50.000 60 28 2 197 254 147 206 2.22e-13 71.2
MS.gene38536.t1 AT2G30590 52.564 78 36 1 342 418 293 370 1.61e-18 87.8
MS.gene38536.t1 AT2G30590 54.237 59 25 2 197 253 314 372 7.06e-13 70.5
MS.gene38536.t1 AT3G04670 51.948 77 36 1 343 418 243 319 1.79e-18 87.0
MS.gene38536.t1 AT3G04670 50.000 64 30 2 197 258 263 326 1.89e-12 68.9
MS.gene38536.t1 AT4G31800 50.725 69 32 2 355 421 103 171 1.84e-18 85.5
MS.gene38536.t1 AT4G31800 42.105 76 42 2 197 270 112 187 8.04e-14 71.6
MS.gene38536.t1 AT4G31800 50.725 69 32 2 355 421 168 236 3.21e-18 85.9
MS.gene38536.t1 AT4G31800 42.105 76 42 2 197 270 177 252 1.44e-13 72.0
MS.gene38536.t1 AT5G43290 61.017 59 23 0 360 418 112 170 3.55e-18 85.1
MS.gene38536.t1 AT5G43290 62.069 58 21 1 195 251 113 170 1.55e-15 77.4
MS.gene38536.t1 AT2G25000 50.000 62 30 1 361 421 102 163 1.59e-17 82.0
MS.gene38536.t1 AT2G25000 42.857 70 38 2 197 264 104 173 6.97e-12 65.9
MS.gene38536.t1 AT2G25000 50.000 62 30 1 361 421 102 163 1.59e-17 82.0
MS.gene38536.t1 AT2G25000 42.857 70 38 2 197 264 104 173 6.97e-12 65.9
MS.gene38536.t1 AT2G25000 50.000 62 30 1 361 421 124 185 3.28e-17 81.6
MS.gene38536.t1 AT2G25000 42.857 70 38 2 197 264 126 195 1.06e-11 65.5
MS.gene38536.t1 AT2G25000 50.000 62 30 1 361 421 145 206 4.81e-17 81.6
MS.gene38536.t1 AT2G25000 42.857 70 38 2 197 264 147 216 1.67e-11 65.5
MS.gene38536.t1 AT4G23550 42.553 94 49 2 351 439 129 222 6.81e-17 82.0
MS.gene38536.t1 AT4G23550 32.540 126 73 5 197 312 141 264 8.02e-11 63.9
MS.gene38536.t1 AT1G69810 45.570 79 41 2 345 421 128 206 8.85e-17 82.0
MS.gene38536.t1 AT1G69810 45.570 79 41 2 345 421 186 264 1.06e-16 82.4
MS.gene38536.t1 AT4G01250 46.512 86 44 2 363 446 129 214 1.30e-15 78.2
MS.gene38536.t1 AT1G29280 51.667 60 28 1 363 421 75 134 6.32e-15 75.1
MS.gene38536.t1 AT1G29280 47.619 63 31 2 197 257 75 137 5.66e-12 66.6
MS.gene38536.t1 AT3G58710 50.746 67 30 2 363 428 72 136 6.23e-14 72.4
MS.gene38536.t1 AT3G58710 46.053 76 38 3 197 270 72 146 3.66e-11 64.3
MS.gene38536.t1 AT3G58710 50.746 67 30 2 363 428 71 135 6.68e-14 72.4
MS.gene38536.t1 AT3G58710 46.053 76 38 3 197 270 71 145 3.72e-11 64.3
MS.gene38536.t1 AT5G52830 42.353 85 47 2 343 426 147 230 8.93e-14 73.2
MS.gene38536.t1 AT5G52830 43.373 83 45 2 195 275 164 246 2.39e-12 68.9
MS.gene38536.t1 AT5G45260 33.835 133 75 4 141 269 1162 1285 2.16e-13 73.6
MS.gene38536.t1 AT2G34830 47.692 65 33 1 363 426 225 289 2.62e-13 72.4
MS.gene38536.t1 AT2G34830 49.206 63 31 1 363 424 216 278 2.64e-13 72.4
MS.gene38536.t1 AT1G30650 49.206 63 31 1 363 424 218 280 5.51e-13 71.2
MS.gene38536.t1 AT2G40740 50.847 59 25 2 196 250 173 231 6.10e-12 67.0
MS.gene38536.t1 AT5G45050 47.692 65 33 1 363 426 1153 1217 6.15e-12 68.9
MS.gene38536.t1 AT5G45050 42.857 91 46 4 175 261 1129 1217 9.95e-11 65.1
MS.gene38536.t1 AT5G45050 47.692 65 33 1 363 426 1181 1245 6.29e-12 68.9
MS.gene38536.t1 AT5G45050 47.692 65 33 1 363 426 1042 1106 6.34e-12 68.9
MS.gene38536.t1 AT5G45050 42.857 91 46 4 175 261 1018 1106 9.84e-11 65.1
MS.gene38536.t1 AT2G40740 51.724 58 24 2 196 249 182 239 8.14e-12 66.6
MS.gene38536.t1 AT5G24110 46.032 63 30 2 191 249 108 170 3.55e-11 64.7
MS.gene38536.t1 AT4G11070 41.860 86 39 4 187 261 95 180 4.71e-11 63.9
MS.gene38536.t1 AT2G46400 35.632 87 52 2 349 431 91 177 5.00e-11 64.3
MS.gene38536.t1 AT2G46400 46.552 58 27 2 196 249 104 161 6.76e-11 63.9
MS.gene38536.t1 AT4G11070 42.529 87 37 5 187 261 127 212 6.48e-11 63.9

Find 109 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCTCCTTTAAATAATTT+TGG 0.080379 3.4:-61437124 MS.gene38536:CDS
TCACTTCCAAAATTATTTAA+AGG 0.218062 3.4:+61437118 None:intergenic
AAGAGAGGTGTAGGAGAAAT+AGG 0.219713 3.4:+61438489 None:intergenic
GAGATCTTTCGGTGTCTTTA+AGG 0.223046 3.4:+61438586 None:intergenic
TTTCGGTGTCTTTAAGGTTT+TGG 0.266179 3.4:+61438592 None:intergenic
GTGCATTTGTAATAGCTTCT+TGG 0.267267 3.4:+61437298 None:intergenic
AGGAGGTGTAGACTTGAATT+TGG 0.275405 3.4:+61438521 None:intergenic
GGATACAGATGGAGGAAATA+TGG 0.277797 3.4:-61436629 MS.gene38536:CDS
GGATACAATTGGAGAAAATA+TGG 0.306925 3.4:-61437349 MS.gene38536:CDS
TCCTTCCAAGCTCAACCAGC+TGG 0.315203 3.4:-61437828 MS.gene38536:CDS
AACAATGTTTCACTTCATAA+TGG 0.317177 3.4:-61435278 MS.gene38536:CDS
GGAGGTGTAGACTTGAATTT+GGG 0.318965 3.4:+61438522 None:intergenic
GAGCAGACTTCTCATAAATC+TGG 0.327536 3.4:-61437031 MS.gene38536:CDS
TTTGGTCGGTTGGAGAGTTA+AGG 0.355015 3.4:+61438610 None:intergenic
TTGAATCTTTCCTATCTTGA+AGG 0.379314 3.4:-61435124 None:intergenic
CTAATAATGAAGGCTTCAAT+TGG 0.393130 3.4:-61437917 MS.gene38536:CDS
AAAGTTGAGAGGGGTTTAGA+TGG 0.393749 3.4:-61437250 MS.gene38536:CDS
CTCTTATTAGCCACAGGCTT+AGG 0.394132 3.4:+61437187 None:intergenic
CGTGTTAATAATATTCTTAG+AGG 0.394717 3.4:-61435185 MS.gene38536:CDS
ACGTTGTTATCACTGCTCTT+AGG 0.396252 3.4:+61435429 None:intergenic
GTTGTTGTTGATGGAATTGT+TGG 0.403923 3.4:+61435301 None:intergenic
TGAGAAGAGTTAAGGAGAAC+AGG 0.405323 3.4:+61438405 None:intergenic
TAATATTGCAGGAGAATAGA+AGG 0.406189 3.4:-61436749 MS.gene38536:intron
CACTTGATGATGAGATCTTT+CGG 0.406857 3.4:+61438575 None:intergenic
AAGTGAAATTCAAATGGATT+TGG 0.410107 3.4:-61437101 MS.gene38536:CDS
GAAAATGAGGGAATATCATT+AGG 0.411282 3.4:-61436725 MS.gene38536:CDS
CATCATCTGATCTTCTACTA+AGG 0.429029 3.4:+61437371 None:intergenic
AAGGAACATTCCTTCAAGAT+AGG 0.432156 3.4:+61435114 None:intergenic
GTAGGAGAAATAGGAAGAGA+TGG 0.441968 3.4:+61438498 None:intergenic
GTGTTCCTCTTATTAGCCAC+AGG 0.441998 3.4:+61437181 None:intergenic
TTAGCAAATGATCCGGTAGT+TGG 0.442580 3.4:+61437936 None:intergenic
GATACAGATGGAGGAAATAT+GGG 0.445361 3.4:-61436628 MS.gene38536:CDS
GTTGTTTGAACAACAACTCT+TGG 0.451286 3.4:+61436677 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.451349 3.4:-61437360 MS.gene38536:CDS
ATCTTCTACAGGCTCCTCCT+TGG 0.451413 3.4:+61435157 None:intergenic
GGATCATTTGCTAATAATGA+AGG 0.453023 3.4:-61437927 MS.gene38536:CDS
ATCTCATCATCAAGTGTTGT+TGG 0.454628 3.4:-61438568 MS.gene38536:CDS
GAAGGAGAAAAGAGAGGTGT+AGG 0.456766 3.4:+61438480 None:intergenic
GAGAATAGAAGGTGAAAATG+AGG 0.457475 3.4:-61436738 MS.gene38536:CDS
CCAAAATTATTTAAAGGAGG+AGG 0.457528 3.4:+61437124 None:intergenic
GACTTACATGAGAAGAGTTA+AGG 0.463339 3.4:+61438397 None:intergenic
AAGTGTTGTTGGATCAAAAC+AGG 0.463589 3.4:-61438557 MS.gene38536:CDS
GACATTGATATTCTAGATGA+TGG 0.466100 3.4:-61436650 MS.gene38536:CDS
GGTATAGAAAAGTATGAAGA+AGG 0.468052 3.4:+61438462 None:intergenic
CCTTCCAAGCTCAACCAGCT+GGG 0.469628 3.4:-61437827 MS.gene38536:CDS
TTCATTATTAGCAAATGATC+CGG 0.475551 3.4:+61437929 None:intergenic
CTAAGCCTGTGGCTAATAAG+AGG 0.478832 3.4:-61437186 MS.gene38536:CDS
CCCAGCTGGTTGAGCTTGGA+AGG 0.483118 3.4:+61437827 None:intergenic
GAAACCCAGCTGGTTGAGCT+TGG 0.484107 3.4:+61437823 None:intergenic
GAAGGAGAAACTTGATGAGA+TGG 0.486771 3.4:+61437845 None:intergenic
TATGGGCAGAAAGTAGTAAA+GGG 0.499601 3.4:-61436611 MS.gene38536:CDS
CAATTGGAAGAATAATTATG+AGG 0.501111 3.4:-61437901 MS.gene38536:CDS
CATTGTTCTGCATCATCTCA+TGG 0.504790 3.4:+61435246 None:intergenic
AATGGATTTGGTTGCTACAC+CGG 0.505910 3.4:-61437089 MS.gene38536:CDS
GTAGTTGTTTGCATTGGTAG+TGG 0.507486 3.4:+61435341 None:intergenic
AAGGAGGTCAGAGAAGAAAG+AGG 0.512892 3.4:+61438629 None:intergenic
GTTCCTGCACCACGTGGAAG+TGG 0.514980 3.4:-61435383 MS.gene38536:CDS
ATATGGGCAGAAAGTAGTAA+AGG 0.520616 3.4:-61436612 MS.gene38536:CDS
TTGTTGGATCAAAACAGGTC+GGG 0.522475 3.4:-61438552 MS.gene38536:CDS
GGAGAAATAGGAAGAGATGG+AGG 0.527547 3.4:+61438501 None:intergenic
TTTCCACTTCCACGTGGTGC+AGG 0.529414 3.4:+61435380 None:intergenic
CTTCCAAAATTATTTAAAGG+AGG 0.531168 3.4:+61437121 None:intergenic
AGTTCAGAAAGAGAGAAGCC+AGG 0.537553 3.4:+61438438 None:intergenic
CTACTAAGGATTTGAACTTG+TGG 0.539306 3.4:+61437385 None:intergenic
GTAGTGGTTTGTTGATAGAG+TGG 0.539439 3.4:+61435357 None:intergenic
CACTGCTCTTAGGTCTTGTG+AGG 0.545249 3.4:+61435439 None:intergenic
AGAATAGAAGGTGAAAATGA+GGG 0.546664 3.4:-61436737 MS.gene38536:CDS
TCACTAGTAGAATTACTCTC+TGG 0.547481 3.4:+61437460 None:intergenic
GCAGTGATAACAACGTATGA+AGG 0.549349 3.4:-61435422 MS.gene38536:CDS
TTGTTCGTAGTTGTTTGCAT+TGG 0.550904 3.4:+61435335 None:intergenic
GAAATAGGAAGAGATGGAGG+AGG 0.551676 3.4:+61438504 None:intergenic
GATGGAATTGTTGGCACTAG+TGG 0.552149 3.4:+61435310 None:intergenic
GAGGGAATATCATTAGGAGC+TGG 0.558610 3.4:-61436719 MS.gene38536:CDS
TACTACAAGTGCACAAACCC+AGG 0.561370 3.4:-61435491 MS.gene38536:CDS
AATGATCCGGTAGTTGGAGA+TGG 0.563554 3.4:+61437942 None:intergenic
ATCGATATCGATGAATTCTC+CGG 0.564317 3.4:+61437070 None:intergenic
CTTAGTAGAAGATCAGATGA+TGG 0.566844 3.4:-61437370 MS.gene38536:CDS
GATGCAGAACAATGGATTCA+CGG 0.571686 3.4:-61435237 MS.gene38536:CDS
GTCGAAGATTGAAACCCAGC+TGG 0.571777 3.4:+61437813 None:intergenic
AGCTGGAAATAGAACAGTGA+GGG 0.575113 3.4:-61436702 MS.gene38536:CDS
ATTCTTCCATCTCCAACTAC+CGG 0.576159 3.4:-61437948 MS.gene38536:CDS
CTAGTAGAATTACTCTCTGG+TGG 0.580327 3.4:+61437463 None:intergenic
AGAGAATGTCAAGGCAGAAG+AGG 0.589262 3.4:-61437871 MS.gene38536:CDS
TTCTAGATGATGGATACAGA+TGG 0.589347 3.4:-61436640 MS.gene38536:CDS
TATGAAGAAGGAGAAAAGAG+AGG 0.593576 3.4:+61438474 None:intergenic
CATGAGATGATGCAGAACAA+TGG 0.596348 3.4:-61435245 MS.gene38536:CDS
TAAAGGGAAATCCAAATCCA+AGG 0.599938 3.4:-61436595 MS.gene38536:intron
GTTGTTGGATCAAAACAGGT+CGG 0.603221 3.4:-61438553 MS.gene38536:CDS
GGTCGGTTGGAGAGTTAAGG+AGG 0.609088 3.4:+61438613 None:intergenic
GAGAATTCATCGATATCGAT+CGG 0.611266 3.4:-61437067 MS.gene38536:CDS
TAGTAGAATTACTCTCTGGT+GGG 0.614330 3.4:+61437464 None:intergenic
TATTCTTAGAGGTAGAGCCA+AGG 0.629340 3.4:-61435174 MS.gene38536:CDS
GGTGTAGACTTGAATTTGGG+GGG 0.629490 3.4:+61438525 None:intergenic
GTTTCAATCTTCGACCACCA+CGG 0.629999 3.4:-61437805 MS.gene38536:CDS
ATACCAACAGGGATGGAACA+TGG 0.636942 3.4:-61437521 MS.gene38536:intron
CAGACTTCTCATAAATCTGG+AGG 0.638474 3.4:-61437028 MS.gene38536:CDS
AGGTGTAGACTTGAATTTGG+GGG 0.639825 3.4:+61438524 None:intergenic
TCTTAGAGGTAGAGCCAAGG+AGG 0.646721 3.4:-61435171 MS.gene38536:CDS
TCATAATCATCCTAAGCCTG+TGG 0.651078 3.4:-61437197 MS.gene38536:CDS
GGAAAAGCAAGAGAATGTCA+AGG 0.656877 3.4:-61437880 MS.gene38536:CDS
AGTGAACAAAACAACAAGAG+TGG 0.657175 3.4:-61437442 MS.gene38536:CDS
CATGATGTTCCTGCACCACG+TGG 0.664697 3.4:-61435389 MS.gene38536:CDS
ATTACTGAGATAGTTTACAA+AGG 0.670402 3.4:-61437223 MS.gene38536:CDS
TAGATGATGGATACAGATGG+AGG 0.677154 3.4:-61436637 MS.gene38536:CDS
GAGGTCAGAGAAGAAAGAGG+AGG 0.687171 3.4:+61438632 None:intergenic
GAGGTGTAGACTTGAATTTG+GGG 0.712764 3.4:+61438523 None:intergenic
GAGTGGTTTCCACTTCCACG+TGG 0.715134 3.4:+61435374 None:intergenic
TCAGAAAGAGAGAAGCCAGG+AGG 0.725467 3.4:+61438441 None:intergenic
GAGCTGGAAATAGAACAGTG+AGG 0.774963 3.4:-61436703 MS.gene38536:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG - chr3.4:61437428-61437447 MS.gene38536:CDS 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3.4:61437427-61437446 MS.gene38536:CDS 10.0%
!!! ATTAATTTTATTAATATTGC+AGG - chr3.4:61437003-61437022 MS.gene38536:CDS 10.0%
!! AATTAGAGTTATATTGTATT+GGG - chr3.4:61437622-61437641 MS.gene38536:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr3.4:61437429-61437448 MS.gene38536:CDS 15.0%
!! ATATAAGAATTAAATCGATA+TGG + chr3.4:61435538-61435557 None:intergenic 15.0%
!! ATTTAATTCTTATATATGGT+TGG - chr3.4:61435543-61435562 MS.gene38536:intron 15.0%
!! TAATTAGAGTTATATTGTAT+TGG - chr3.4:61437621-61437640 MS.gene38536:intron 15.0%
!! TCTTGAAAAAAATTGTATAT+GGG + chr3.4:61437883-61437902 None:intergenic 15.0%
!! TTCTTGAAAAAAATTGTATA+TGG + chr3.4:61437884-61437903 None:intergenic 15.0%
!! TTGTTTACTAAACATAATAT+AGG - chr3.4:61438246-61438265 MS.gene38536:intron 15.0%
!!! ATCGATTTAATTCTTATATA+TGG - chr3.4:61435539-61435558 MS.gene38536:intron 15.0%
!!! TATGTATTTTTCTTTTCATT+TGG - chr3.4:61436170-61436189 MS.gene38536:intron 15.0%
!!! TGAACATTTAATTTTAATCA+TGG - chr3.4:61435619-61435638 MS.gene38536:intron 15.0%
!!! TTTTATCATATCACATAAAA+TGG - chr3.4:61436858-61436877 MS.gene38536:intron 15.0%
!!! TTTTTTACTAAAAAAAAGAG+AGG + chr3.4:61436816-61436835 None:intergenic 15.0%
!! AATGAGTAAAATAAAACTAG+TGG + chr3.4:61438208-61438227 None:intergenic 20.0%
!! ACACAAAATTAACAAAACTA+AGG - chr3.4:61437829-61437848 MS.gene38536:CDS 20.0%
!! ATATTCTTATTGGTCAAATT+TGG - chr3.4:61438096-61438115 MS.gene38536:intron 20.0%
!! CAATGTCTAAATATTCTTAT+TGG - chr3.4:61438086-61438105 MS.gene38536:intron 20.0%
!! TCACTTCCAAAATTATTTAA+AGG + chr3.4:61436648-61436667 None:intergenic 20.0%
!!! AACAACAACTTTTAAAAAGT+TGG + chr3.4:61437243-61437262 None:intergenic 20.0%
!!! ATGAGTTTGATTTTCATATA+TGG + chr3.4:61435711-61435730 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr3.4:61437691-61437710 MS.gene38536:intron 20.0%
!!! TGTTAATTTTGTGTATCTTT+AGG + chr3.4:61437823-61437842 None:intergenic 20.0%
!!! TTAACAAAACTAAGGTATTT+TGG - chr3.4:61437837-61437856 MS.gene38536:CDS 20.0%
! AAACTTCCAAAGCATAAAAA+AGG + chr3.4:61437319-61437338 None:intergenic 25.0%
! AACAAAGAAAAAAGTTGAGA+GGG - chr3.4:61436503-61436522 MS.gene38536:intron 25.0%
! AACAATGTTTCACTTCATAA+TGG - chr3.4:61438485-61438504 MS.gene38536:CDS 25.0%
! ACATTTAAGCAGTTAATTGA+GGG + chr3.4:61437761-61437780 None:intergenic 25.0%
! AGTGAGAATTATGATCAATT+TGG + chr3.4:61435440-61435459 None:intergenic 25.0%
! ATATAAAGTGATCACATTCA+TGG + chr3.4:61436952-61436971 None:intergenic 25.0%
! ATTACTGAGATAGTTTACAA+AGG - chr3.4:61436540-61436559 MS.gene38536:intron 25.0%
! CAATTGGAAGAATAATTATG+AGG - chr3.4:61435862-61435881 MS.gene38536:intron 25.0%
! CGTGTTAATAATATTCTTAG+AGG - chr3.4:61438578-61438597 MS.gene38536:CDS 25.0%
! CTTCCAAAATTATTTAAAGG+AGG + chr3.4:61436645-61436664 None:intergenic 25.0%
! TTACCGACAAAAATTAAAGA+CGG - chr3.4:61436058-61436077 MS.gene38536:intron 25.0%
! TTCATTATTAGCAAATGATC+CGG + chr3.4:61435837-61435856 None:intergenic 25.0%
!! AAGTGAAATTCAAATGGATT+TGG - chr3.4:61436662-61436681 MS.gene38536:CDS 25.0%
!! CCACAATATAACAAATTTTG+AGG + chr3.4:61436915-61436934 None:intergenic 25.0%
!! TACCATTATAGATCATGTTT+TGG - chr3.4:61437998-61438017 MS.gene38536:intron 25.0%
!! TGAGTCTTGTGAATTTAAAT+TGG + chr3.4:61436000-61436019 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr3.4:61437668-61437687 MS.gene38536:intron 25.0%
!! TTGATGTATTTGGTTCAAAA+TGG + chr3.4:61437528-61437547 None:intergenic 25.0%
!! TTTAAAGTCACATATATGTG+TGG - chr3.4:61435647-61435666 MS.gene38536:intron 25.0%
!! TTTTCTTTGTTGGACAATTA+GGG + chr3.4:61436494-61436513 None:intergenic 25.0%
!! TTTTTCTTTGTTGGACAATT+AGG + chr3.4:61436495-61436514 None:intergenic 25.0%
!!! CCTCAAAATTTGTTATATTG+TGG - chr3.4:61436912-61436931 MS.gene38536:intron 25.0%
!!! CTTTTTAATTACCTTGGATT+TGG + chr3.4:61437182-61437201 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr3.4:61437690-61437709 MS.gene38536:intron 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG - chr3.4:61437499-61437518 MS.gene38536:CDS 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG + chr3.4:61437518-61437499 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr3.4:61437669-61437688 MS.gene38536:intron 25.0%
!!! TTTCCGTCTTTAATTTTTGT+CGG + chr3.4:61436064-61436083 None:intergenic 25.0%
!!! TTTTGGAAGTGAAATTCAAA+TGG - chr3.4:61436656-61436675 MS.gene38536:CDS 25.0%
AAAAATGAGTCATCTTCTAC+AGG + chr3.4:61438620-61438639 None:intergenic 30.0%
AAACTTTCATGTATACCAAC+AGG - chr3.4:61436230-61436249 MS.gene38536:intron 30.0%
AACTTTCATGTATACCAACA+GGG - chr3.4:61436231-61436250 MS.gene38536:intron 30.0%
ACAAAGAAAAAAGTTGAGAG+GGG - chr3.4:61436504-61436523 MS.gene38536:intron 30.0%
AGAATAGAAGGTGAAAATGA+GGG - chr3.4:61437026-61437045 MS.gene38536:CDS 30.0%
ATGAACCTGATTCCAAAAAA+TGG - chr3.4:61436781-61436800 MS.gene38536:intron 30.0%
CAACAAAGAAAAAAGTTGAG+AGG - chr3.4:61436502-61436521 MS.gene38536:intron 30.0%
CACATTTAAGCAGTTAATTG+AGG + chr3.4:61437762-61437781 None:intergenic 30.0%
CCAAAATTATTTAAAGGAGG+AGG + chr3.4:61436642-61436661 None:intergenic 30.0%
CTAATAATGAAGGCTTCAAT+TGG - chr3.4:61435846-61435865 MS.gene38536:intron 30.0%
CTCAATTAACTGCTTAAATG+TGG - chr3.4:61437760-61437779 MS.gene38536:intron 30.0%
GAAAATGAGGGAATATCATT+AGG - chr3.4:61437038-61437057 MS.gene38536:CDS 30.0%
GACATTGATATTCTAGATGA+TGG - chr3.4:61437113-61437132 MS.gene38536:CDS 30.0%
GGACATGATTTAATAGTCAA+AGG + chr3.4:61437222-61437241 None:intergenic 30.0%
GGATACAATTGGAGAAAATA+TGG - chr3.4:61436414-61436433 MS.gene38536:intron 30.0%
GTCCAAAACATGATCTATAA+TGG + chr3.4:61438003-61438022 None:intergenic 30.0%
TAATATTGCAGGAGAATAGA+AGG - chr3.4:61437014-61437033 MS.gene38536:CDS 30.0%
TATGGACAAAAACAAGTGAA+AGG - chr3.4:61436432-61436451 MS.gene38536:intron 30.0%
TATGTCTATGTGATTCTAGT+TGG - chr3.4:61435753-61435772 MS.gene38536:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr3.4:61437436-61437455 MS.gene38536:CDS 30.0%
! AACATTGTTGTTGTTGTTGA+TGG + chr3.4:61438474-61438493 None:intergenic 30.0%
! ACATTCATGGATTTGAAATG+TGG + chr3.4:61436939-61436958 None:intergenic 30.0%
! ATGTGATGTCTAAGACTAAA+GGG - chr3.4:61438178-61438197 MS.gene38536:intron 30.0%
! CAAAAAGTCTTGAGAGTTTT+TGG + chr3.4:61438064-61438083 None:intergenic 30.0%
! CCTCCTCCTTTAAATAATTT+TGG - chr3.4:61436639-61436658 MS.gene38536:CDS 30.0%
! CCTTTTTACAAGAGACAAAT+GGG - chr3.4:61437476-61437495 MS.gene38536:CDS 30.0%
! CCTTTTTACAAGAGACAAAT+GGG + chr3.4:61437495-61437476 None:intergenic 30.0%
! GAGACGAAATTCATGTTTTT+CGG - chr3.4:61436135-61436154 MS.gene38536:intron 30.0%
! GGATCATTTGCTAATAATGA+AGG - chr3.4:61435836-61435855 MS.gene38536:intron 30.0%
! GGTATAGAAAAGTATGAAGA+AGG + chr3.4:61435304-61435323 None:intergenic 30.0%
! TCCTTTTTACAAGAGACAAA+TGG - chr3.4:61437475-61437494 MS.gene38536:CDS 30.0%
! TCCTTTTTACAAGAGACAAA+TGG + chr3.4:61437494-61437475 None:intergenic 30.0%
!! AGAGTGCTTTTTAATTACCT+TGG + chr3.4:61437188-61437207 None:intergenic 30.0%
!! TGGTTGTGATTTGTTTAAAG+TGG - chr3.4:61435667-61435686 MS.gene38536:intron 30.0%
!!! AGGAAAAACTCACCATTTTT+TGG + chr3.4:61436796-61436815 None:intergenic 30.0%
!!! CAAAACTAAGGTATTTTGGT+AGG - chr3.4:61437841-61437860 MS.gene38536:CDS 30.0%
!!! CTCTCAACTTTTTTCTTTGT+TGG + chr3.4:61436504-61436523 None:intergenic 30.0%
!!! TTGACTCCTTTTTTATGCTT+TGG - chr3.4:61437310-61437329 MS.gene38536:CDS 30.0%
ACATTTCTCTAATGCATGCA+TGG - chr3.4:61438125-61438144 MS.gene38536:intron 35.0%
AGAAAATGGGTCAGATATTC+CGG - chr3.4:61437704-61437723 MS.gene38536:intron 35.0%
AGTGAACAAAACAACAAGAG+TGG - chr3.4:61436321-61436340 MS.gene38536:intron 35.0%
ATATGGGCAGAAAGTAGTAA+AGG - chr3.4:61437151-61437170 MS.gene38536:CDS 35.0%
ATCGATATCGATGAATTCTC+CGG + chr3.4:61436696-61436715 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr3.4:61437407-61437426 None:intergenic 35.0%
ATGCATGCATTAGAGAAATG+TGG + chr3.4:61438126-61438145 None:intergenic 35.0%
CACGTGATAGGTAAAGTATA+GGG + chr3.4:61438028-61438047 None:intergenic 35.0%
CATCATCTGATCTTCTACTA+AGG + chr3.4:61436395-61436414 None:intergenic 35.0%
CATTTCTCTAATGCATGCAT+GGG - chr3.4:61438126-61438145 MS.gene38536:intron 35.0%
CCCATTTGTCTCTTGTAAAA+AGG - chr3.4:61437558-61437577 MS.gene38536:intron 35.0%
CCCATTTGTCTCTTGTAAAA+AGG + chr3.4:61437577-61437558 None:intergenic 35.0%
CTACTAAGGATTTGAACTTG+TGG + chr3.4:61436381-61436400 None:intergenic 35.0%
CTTAGTAGAAGATCAGATGA+TGG - chr3.4:61436393-61436412 MS.gene38536:intron 35.0%
GACTTACATGAGAAGAGTTA+AGG + chr3.4:61435369-61435388 None:intergenic 35.0%
GAGAATAGAAGGTGAAAATG+AGG - chr3.4:61437025-61437044 MS.gene38536:CDS 35.0%
GAGAATTCATCGATATCGAT+CGG - chr3.4:61436696-61436715 MS.gene38536:CDS 35.0%
GATACAGATGGAGGAAATAT+GGG - chr3.4:61437135-61437154 MS.gene38536:CDS 35.0%
GTGCATTTGTAATAGCTTCT+TGG + chr3.4:61436468-61436487 None:intergenic 35.0%
GTTGTTTGAACAACAACTCT+TGG + chr3.4:61437089-61437108 None:intergenic 35.0%
TAAAGGGAAATCCAAATCCA+AGG - chr3.4:61437168-61437187 MS.gene38536:CDS 35.0%
TAGTAGAATTACTCTCTGGT+GGG + chr3.4:61436302-61436321 None:intergenic 35.0%
TATGAAGAAGGAGAAAAGAG+AGG + chr3.4:61435292-61435311 None:intergenic 35.0%
TATGGGCAGAAAGTAGTAAA+GGG - chr3.4:61437152-61437171 MS.gene38536:CDS 35.0%
TCACTAGTAGAATTACTCTC+TGG + chr3.4:61436306-61436325 None:intergenic 35.0%
TGCATGCATTAGAGAAATGT+GGG + chr3.4:61438125-61438144 None:intergenic 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG - chr3.4:61437563-61437582 MS.gene38536:intron 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG + chr3.4:61437582-61437563 None:intergenic 35.0%
TTGTTCGTAGTTGTTTGCAT+TGG + chr3.4:61438431-61438450 None:intergenic 35.0%
! AAGTGTTGTTGGATCAAAAC+AGG - chr3.4:61435206-61435225 MS.gene38536:CDS 35.0%
! ATCTCATCATCAAGTGTTGT+TGG - chr3.4:61435195-61435214 MS.gene38536:CDS 35.0%
! ATTGTATATGGGTTGCCTTT+AGG + chr3.4:61437872-61437891 None:intergenic 35.0%
! CATGTGATGTCTAAGACTAA+AGG - chr3.4:61438177-61438196 MS.gene38536:intron 35.0%
! GTTACATACATTTTGAACCG+TGG + chr3.4:61435978-61435997 None:intergenic 35.0%
! GTTGTTGTTGATGGAATTGT+TGG + chr3.4:61438465-61438484 None:intergenic 35.0%
! TCATACTTTTCTATACCTCC+TGG - chr3.4:61435307-61435326 MS.gene38536:CDS 35.0%
! TTTTGGTAGGTCAAACCTAA+AGG - chr3.4:61437854-61437873 MS.gene38536:CDS 35.0%
!! CACTTGATGATGAGATCTTT+CGG + chr3.4:61435191-61435210 None:intergenic 35.0%
!! CTTTAGTCTTAGACATCACA+TGG + chr3.4:61438179-61438198 None:intergenic 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr3.4:61436403-61436422 MS.gene38536:intron 35.0%
!! TTCTAGATGATGGATACAGA+TGG - chr3.4:61437123-61437142 MS.gene38536:CDS 35.0%
!!! ACTCACCATTTTTTGGAATC+AGG + chr3.4:61436789-61436808 None:intergenic 35.0%
!!! TTTCGGTGTCTTTAAGGTTT+TGG + chr3.4:61435174-61435193 None:intergenic 35.0%
AAAGTGGAATATACTCCCTC+CGG - chr3.4:61437452-61437471 MS.gene38536:CDS 40.0%
AAAGTTGAGAGGGGTTTAGA+TGG - chr3.4:61436513-61436532 MS.gene38536:intron 40.0%
ACGTTGTTATCACTGCTCTT+AGG + chr3.4:61438337-61438356 None:intergenic 40.0%
AGCTGGAAATAGAACAGTGA+GGG - chr3.4:61437061-61437080 MS.gene38536:CDS 40.0%
AGGTGTAGACTTGAATTTGG+GGG + chr3.4:61435242-61435261 None:intergenic 40.0%
ATTCTTCCATCTCCAACTAC+CGG - chr3.4:61435815-61435834 MS.gene38536:intron 40.0%
CAGACTTCTCATAAATCTGG+AGG - chr3.4:61436735-61436754 MS.gene38536:CDS 40.0%
CATGAGATGATGCAGAACAA+TGG - chr3.4:61438518-61438537 MS.gene38536:CDS 40.0%
CATTGTTCTGCATCATCTCA+TGG + chr3.4:61438520-61438539 None:intergenic 40.0%
CTAGTAGAATTACTCTCTGG+TGG + chr3.4:61436303-61436322 None:intergenic 40.0%
GAAGGAGAAACTTGATGAGA+TGG + chr3.4:61435921-61435940 None:intergenic 40.0%
GAGCAGACTTCTCATAAATC+TGG - chr3.4:61436732-61436751 MS.gene38536:CDS 40.0%
GAGGTGTAGACTTGAATTTG+GGG + chr3.4:61435243-61435262 None:intergenic 40.0%
GCACGTGATAGGTAAAGTAT+AGG + chr3.4:61438029-61438048 None:intergenic 40.0%
GCAGTGATAACAACGTATGA+AGG - chr3.4:61438341-61438360 MS.gene38536:intron 40.0%
GGAAAAGCAAGAGAATGTCA+AGG - chr3.4:61435883-61435902 MS.gene38536:intron 40.0%
GGATACAGATGGAGGAAATA+TGG - chr3.4:61437134-61437153 MS.gene38536:CDS 40.0%
GTAGGAGAAATAGGAAGAGA+TGG + chr3.4:61435268-61435287 None:intergenic 40.0%
GTGATAGGTAAAGTATAGGG+TGG + chr3.4:61438025-61438044 None:intergenic 40.0%
GTTGTTGGATCAAAACAGGT+CGG - chr3.4:61435210-61435229 MS.gene38536:CDS 40.0%
TATTCTTAGAGGTAGAGCCA+AGG - chr3.4:61438589-61438608 MS.gene38536:CDS 40.0%
TCATAATCATCCTAAGCCTG+TGG - chr3.4:61436566-61436585 MS.gene38536:intron 40.0%
TGAGAAGAGTTAAGGAGAAC+AGG + chr3.4:61435361-61435380 None:intergenic 40.0%
TTAGCAAATGATCCGGTAGT+TGG + chr3.4:61435830-61435849 None:intergenic 40.0%
TTCATGTATACCAACAGGGA+TGG - chr3.4:61436235-61436254 MS.gene38536:intron 40.0%
TTGTTGGATCAAAACAGGTC+GGG - chr3.4:61435211-61435230 MS.gene38536:CDS 40.0%
! AAGAGAGGTGTAGGAGAAAT+AGG + chr3.4:61435277-61435296 None:intergenic 40.0%
! AATGGATTTGGTTGCTACAC+CGG - chr3.4:61436674-61436693 MS.gene38536:CDS 40.0%
! ACATACATTTTGAACCGTGG+TGG + chr3.4:61435975-61435994 None:intergenic 40.0%
! AGGAGGTGTAGACTTGAATT+TGG + chr3.4:61435245-61435264 None:intergenic 40.0%
! CAAACTGGCTCAGATAAAAC+GGG + chr3.4:61437392-61437411 None:intergenic 40.0%
! CCAAACTGGCTCAGATAAAA+CGG + chr3.4:61437393-61437412 None:intergenic 40.0%
! GATGCAGAACAATGGATTCA+CGG - chr3.4:61438526-61438545 MS.gene38536:CDS 40.0%
! GGAGGTGTAGACTTGAATTT+GGG + chr3.4:61435244-61435263 None:intergenic 40.0%
! GTAGTTGTTTGCATTGGTAG+TGG + chr3.4:61438425-61438444 None:intergenic 40.0%
!! GAGATCTTTCGGTGTCTTTA+AGG + chr3.4:61435180-61435199 None:intergenic 40.0%
!! GTAGTGGTTTGTTGATAGAG+TGG + chr3.4:61438409-61438428 None:intergenic 40.0%
!! TAGATGATGGATACAGATGG+AGG - chr3.4:61437126-61437145 MS.gene38536:CDS 40.0%
!!! GGTGTCTTTAAGGTTTTGGT+CGG + chr3.4:61435170-61435189 None:intergenic 40.0%
!!! TCTTTAAGGTTTTGGTCGGT+TGG + chr3.4:61435166-61435185 None:intergenic 40.0%
AAGGAGGTCAGAGAAGAAAG+AGG + chr3.4:61435137-61435156 None:intergenic 45.0%
AATGATCCGGTAGTTGGAGA+TGG + chr3.4:61435824-61435843 None:intergenic 45.0%
ACTTTACCTATCACGTGCAG+TGG - chr3.4:61438031-61438050 MS.gene38536:intron 45.0%
AGAGAATGTCAAGGCAGAAG+AGG - chr3.4:61435892-61435911 MS.gene38536:intron 45.0%
AGTTCAGAAAGAGAGAAGCC+AGG + chr3.4:61435328-61435347 None:intergenic 45.0%
ATACCAACAGGGATGGAACA+TGG - chr3.4:61436242-61436261 MS.gene38536:intron 45.0%
ATGGGTCAGATATTCCGGAA+CGG - chr3.4:61437709-61437728 MS.gene38536:intron 45.0%
CTAAGCCTGTGGCTAATAAG+AGG - chr3.4:61436577-61436596 MS.gene38536:intron 45.0%
CTAATTCCACTGCACGTGAT+AGG + chr3.4:61438040-61438059 None:intergenic 45.0%
CTCTTATTAGCCACAGGCTT+AGG + chr3.4:61436579-61436598 None:intergenic 45.0%
CTCTTGTAAAAAGGACCGGA+GGG - chr3.4:61437567-61437586 MS.gene38536:intron 45.0%
CTCTTGTAAAAAGGACCGGA+GGG + chr3.4:61437586-61437567 None:intergenic 45.0%
GAAATAGGAAGAGATGGAGG+AGG + chr3.4:61435262-61435281 None:intergenic 45.0%
GAGCTGGAAATAGAACAGTG+AGG - chr3.4:61437060-61437079 MS.gene38536:CDS 45.0%
GAGGGAATATCATTAGGAGC+TGG - chr3.4:61437044-61437063 MS.gene38536:CDS 45.0%
GATGGAATTGTTGGCACTAG+TGG + chr3.4:61438456-61438475 None:intergenic 45.0%
GGAGAAATAGGAAGAGATGG+AGG + chr3.4:61435265-61435284 None:intergenic 45.0%
GGTGTAGACTTGAATTTGGG+GGG + chr3.4:61435241-61435260 None:intergenic 45.0%
GTGTTCCTCTTATTAGCCAC+AGG + chr3.4:61436585-61436604 None:intergenic 45.0%
GTTTCAATCTTCGACCACCA+CGG - chr3.4:61435958-61435977 MS.gene38536:intron 45.0%
TACTACAAGTGCACAAACCC+AGG - chr3.4:61438272-61438291 MS.gene38536:intron 45.0%
TCCCAATACAATACTCCCTC+CGG + chr3.4:61437585-61437604 None:intergenic 45.0%
TCTCTTGTAAAAAGGACCGG+AGG - chr3.4:61437566-61437585 MS.gene38536:intron 45.0%
TCTCTTGTAAAAAGGACCGG+AGG + chr3.4:61437585-61437566 None:intergenic 45.0%
TTTGGTCGGTTGGAGAGTTA+AGG + chr3.4:61435156-61435175 None:intergenic 45.0%
! CCGTTTTATCTGAGCCAGTT+TGG - chr3.4:61437390-61437409 MS.gene38536:CDS 45.0%
! CGTTCGACATGTTTTCTCAC+TGG + chr3.4:61438302-61438321 None:intergenic 45.0%
! GAAGGAGAAAAGAGAGGTGT+AGG + chr3.4:61435286-61435305 None:intergenic 45.0%
! GTTTTCTCACTGGACATCCT+GGG + chr3.4:61438292-61438311 None:intergenic 45.0%
! TGTTTTCTCACTGGACATCC+TGG + chr3.4:61438293-61438312 None:intergenic 45.0%
!! ACCGGAGGGAGTATTGTATT+GGG - chr3.4:61437581-61437600 MS.gene38536:intron 45.0%
ATCTTCTACAGGCTCCTCCT+TGG + chr3.4:61438609-61438628 None:intergenic 50.0%
CTCAGATAAAACGGGACGGA+GGG + chr3.4:61437384-61437403 None:intergenic 50.0%
CTGGCTCAGATAAAACGGGA+CGG + chr3.4:61437388-61437407 None:intergenic 50.0%
GAGGTCAGAGAAGAAAGAGG+AGG + chr3.4:61435134-61435153 None:intergenic 50.0%
GTCAGATATTCCGGAACGGA+GGG - chr3.4:61437713-61437732 MS.gene38536:intron 50.0%
GTCGAAGATTGAAACCCAGC+TGG + chr3.4:61435953-61435972 None:intergenic 50.0%
TCACCATGTTCCATCCCTGT+TGG + chr3.4:61436248-61436267 None:intergenic 50.0%
TCAGAAAGAGAGAAGCCAGG+AGG + chr3.4:61435325-61435344 None:intergenic 50.0%
TCTTAGAGGTAGAGCCAAGG+AGG - chr3.4:61438592-61438611 MS.gene38536:CDS 50.0%
! CACTGCTCTTAGGTCTTGTG+AGG + chr3.4:61438327-61438346 None:intergenic 50.0%
!! GACCGGAGGGAGTATTGTAT+TGG - chr3.4:61437580-61437599 MS.gene38536:intron 50.0%
CATGATGTTCCTGCACCACG+TGG - chr3.4:61438374-61438393 MS.gene38536:intron 55.0%
CCTTCCAAGCTCAACCAGCT+GGG - chr3.4:61435936-61435955 MS.gene38536:intron 55.0%
GAAACCCAGCTGGTTGAGCT+TGG + chr3.4:61435943-61435962 None:intergenic 55.0%
GAGTGGTTTCCACTTCCACG+TGG + chr3.4:61438392-61438411 None:intergenic 55.0%
GCTCAGATAAAACGGGACGG+AGG + chr3.4:61437385-61437404 None:intergenic 55.0%
GGTCAGATATTCCGGAACGG+AGG - chr3.4:61437712-61437731 MS.gene38536:intron 55.0%
GGTCGGTTGGAGAGTTAAGG+AGG + chr3.4:61435153-61435172 None:intergenic 55.0%
TCCTTCCAAGCTCAACCAGC+TGG - chr3.4:61435935-61435954 MS.gene38536:intron 55.0%
TTTCCACTTCCACGTGGTGC+AGG + chr3.4:61438386-61438405 None:intergenic 55.0%
CCCAGCTGGTTGAGCTTGGA+AGG + chr3.4:61435939-61435958 None:intergenic 60.0%
GCCTACTACTCCCTCCGTTC+CGG + chr3.4:61437726-61437745 None:intergenic 60.0%
GTTCCTGCACCACGTGGAAG+TGG - chr3.4:61438380-61438399 MS.gene38536:intron 60.0%
TCCGGAACGGAGGGAGTAGT+AGG - chr3.4:61437722-61437741 MS.gene38536:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 61435127 61438658 61435127 ID=MS.gene38536
chr3.4 mRNA 61435127 61438658 61435127 ID=MS.gene38536.t1;Parent=MS.gene38536
chr3.4 exon 61438404 61438658 61438404 ID=MS.gene38536.t1.exon1;Parent=MS.gene38536.t1
chr3.4 CDS 61438404 61438658 61438404 ID=cds.MS.gene38536.t1;Parent=MS.gene38536.t1
chr3.4 exon 61437797 61437970 61437797 ID=MS.gene38536.t1.exon2;Parent=MS.gene38536.t1
chr3.4 CDS 61437797 61437970 61437797 ID=cds.MS.gene38536.t1;Parent=MS.gene38536.t1
chr3.4 exon 61436983 61437533 61436983 ID=MS.gene38536.t1.exon3;Parent=MS.gene38536.t1
chr3.4 CDS 61436983 61437533 61436983 ID=cds.MS.gene38536.t1;Parent=MS.gene38536.t1
chr3.4 exon 61436596 61436760 61436596 ID=MS.gene38536.t1.exon4;Parent=MS.gene38536.t1
chr3.4 CDS 61436596 61436760 61436596 ID=cds.MS.gene38536.t1;Parent=MS.gene38536.t1
chr3.4 exon 61435127 61435517 61435127 ID=MS.gene38536.t1.exon5;Parent=MS.gene38536.t1
chr3.4 CDS 61435127 61435517 61435127 ID=cds.MS.gene38536.t1;Parent=MS.gene38536.t1
Gene Sequence

>MS.gene38536

ATGACCTCCTCTTTCTTCTCTGACCTCCTTAACTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTGTTGGATCAAAACAGGTCGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTATTTCTCCTACACCTCTCTTTTCTCCTTCTTCATACTTTTCTATACCTCCTGGCTTCTCTCTTTCTGAACTTCTTGATTCTCCTGTTCTCCTTAACTCTTCTCATGTAAGTCTCATAACAAATTCAACTTCTTTTGTTACAAAAATAATTCATCAAATCACCAAATTGATCATAATTCTCACTATCTTTTATATTAATTATTGTTTTTGTGATAGTTGTTTGTTGAGTATATATATGATATTACTTTGTGTTGTTTTTCCATATCGATTTAATTCTTATATATGGTTGGTGTAAATATTTTTTTACACTTAAAAAATGAATCATAATTGTTAGATCATTATATGAACATTTAATTTTAATCATGGTTATTTTTAAAGTCACATATATGTGTGGTTGTGATTTGTTTAAAGTGGAAATAAAATTGATAGAAACCATATATGAAAATCAAACTCATATTATATACTCTTTTTTATATTTATGTCTATGTGATTCTAGTTGGTTGCATATATATAATATAATTTTTTTTTTTTTAATTCAGATTCTTCCATCTCCAACTACCGGATCATTTGCTAATAATGAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAACCAGCTGGGTTTCAATCTTCGACCACCACGGTTCAAAATGTATGTAACCAATTTAAATTCACAAGACTCATTTATAACACTTGTGCATATACTAAAAAAATACTCGAATTACCGACAAAAATTAAAGACGGAAAAAAGTAATTAATCTCTAATTCTTACATCTTTAAAATTTAGCGACAGAATTAGAGACGAAATTCATGTTTTTCGGTCGTTAGAAGTATATGTATTTTTCTTTTCATTTGGATAAATAGTTTAAATTCAATTTTTTGACATATGTTTCAAACTTTCATGTATACCAACAGGGATGGAACATGGTGAAAACTGAAAACTCTTCTTCAATGCAAAGTTTCCCACCAGAGAGTAATTCTACTAGTGAACAAAACAACAAGAGTGGTTCACAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAAATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACATACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTAGATGGACAAATTACTGAGATAGTTTACAAAGGTAGTCATAATCATCCTAAGCCTGTGGCTAATAAGAGGAACACAAACTCGATGTCTTCATCGTCGTCACTTGCAAATCCTCCTCCTTTAAATAATTTTGGAAGTGAAATTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATCGGAGATGATGATTTTGAGCAGACTTCTCATAAATCTGGAGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATTCCAAAAAATGGTGAGTTTTTCCTCTCTTTTTTTTAGTAAAAAAAATTAGTGTGACACTTATATCATTTTATCATATCACATAAAATGGAAACTTTAATTGTAATACTTTGTTGCACATACCTCAAAATTTGTTATATTGTGGACCACATTTCAAATCCATGAATGTGATCACTTTATATATAGTTACATTTTATTTCATAATCATTTTGAATTAATTTTATTAATATTGCAGGAGAATAGAAGGTGAAAATGAGGGAATATCATTAGGAGCTGGAAATAGAACAGTGAGGGAACCAAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGTAATTAAAAAGCACTCTTTTGATATTTTCCTTTGACTATTAAATCATGTCCAACTTTTTAAAAGTTGTTGTTCTTTTTACTTTAAGAATTTTAGTATGAGAATTACATCATAGAGTTCTTTGACTCCTTTTTTATGCTTTGGAAGTTTGAGATAAAGCACAAAAAATTGCTTTTATGCTAATATGTTACTCCCTCCGTCCCGTTTTATCTGAGCCAGTTTGGTTTTTCACACAGATTAAGAAAAATGTATAAATAAAGGGGAAAGTGGAATATACTCCCTCCGGTCCTTTTTACAAGAGACAAATGGGTCAACTAAAGTTGATGTATTTGGTCTCCATTTTGAACCAAATACATCAACTTTAGTTGACCCATTTGTCTCTTGTAAAAAGGACCGGAGGGAGTATTGTATTGGGAATGATGAAAGTAGTATTAATTAGAGTTATATTGTATTGGGAATGATGAAAGTTGTATTGAAAATTGAAATGACTCAGTTATTTTGGGACACTTTTTTTTAGAAAATGGGTCAGATATTCCGGAACGGAGGGAGTAGTAGGCAATTATATCACGCCCTCAATTAACTGCTTAAATGTGGAGTACAATATAACTAAATACATTTATTATTATTTTTTCCTAAAGATACACAAAATTAACAAAACTAAGGTATTTTGGTAGGTCAAACCTAAAGGCAACCCATATACAATTTTTTTCAAGAATTCATACAAAAAATGTACACATTAAATACATGATCTATTTATTTTAATATATGCAAAAATTTCAAAGTGAATTTATGAAAAGCAACGTACAATGTACCATTATAGATCATGTTTTGGACCACCCTATACTTTACCTATCACGTGCAGTGGAATTAGACCAAAAACTCTCAAGACTTTTTGCACAATGTCTAAATATTCTTATTGGTCAAATTTGGCAACCCACATTTCTCTAATGCATGCATGGGATGAGAATGAGACTCAAATATTCTATGCCATGTGATGTCTAAGACTAAAGGGTTTTCCACTAGTTTTATTTTACTCATTTTGTGTAATTAATTAATTTTGTTTACTAAACATAATATAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGAAAACACAATCATGATGTTCCTGCACCACGTGGAAGTGGAAACCACTCTATCAACAAACCACTACCAATGCAAACAACTACGAACAACACCACTAGTGCCAACAATTCCATCAACAACAACAACAATGTTTCACTTCATAATGGATTCTTCAACCATGAGATGATGCAGAACAATGGATTCACGGTTGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTCTTAGAGGTAGAGCCAAGGAGGAGCCTGTAGAAGATGACTCATTTTTTGAATCTTTCCTATCTTGA
Protein sequence

>MS.gene38536.t1

MTSSFFSDLLNSPTDQNLKDTERSHHQVLLDQNRSGLPPKFKSTPPPSLPISPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNEGFNWKNNYEEKQENVKAEEETISSSFSFQAQPAGFQSSTTTVQNGWNMVKTENSSSMQSFPPESNSTSEQNNKSGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNTNSMSSSSSLANPPPLNNFGSEIQMDLVATPENSSISIGDDDFEQTSHKSGGDHDQFCEDEPDSKKWRIEGENEGISLGAGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTTTNNTTSANNSINNNNNVSLHNGFFNHEMMQNNGFTVDSYMNMNQQRVNNILRGRAKEEPVEDDSFFESFLS