Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39233.t1 | XP_013467775.1 | 96.8 | 596 | 19 | 0 | 1 | 596 | 1 | 596 | 0.00E+00 | 1176.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39233.t1 | Q9M9Y8 | 83.4 | 553 | 88 | 1 | 48 | 596 | 43 | 595 | 2.4e-272 | 939.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39233.t1 | A0A072VJ38 | 96.8 | 596 | 19 | 0 | 1 | 596 | 1 | 596 | 0.0e+00 | 1176.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049805 | MS.gene39233 | 0.802152 | 6.43E-49 | -1.69E-46 |
| MS.gene050625 | MS.gene39233 | 0.832263 | 1.04E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene39233 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene39233 | 0.805884 | 1.08E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene39233 | 0.809733 | 1.64E-50 | -1.69E-46 |
| MS.gene055486 | MS.gene39233 | 0.806148 | 9.47E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene39233 | 0.805034 | 1.62E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene39233 | 0.809846 | 1.55E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene39233 | 0.830346 | 3.09E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43489 | MS.gene39233 | PPI |
| MS.gene042039 | MS.gene39233 | PPI |
| MS.gene012800 | MS.gene39233 | PPI |
| MS.gene95041 | MS.gene39233 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39233.t1 | MTR_1g054965 | 96.812 | 596 | 19 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1192 |
| MS.gene39233.t1 | MTR_1g054965 | 96.200 | 500 | 19 | 0 | 1 | 500 | 1 | 500 | 0.0 | 991 |
| MS.gene39233.t1 | MTR_1g054965 | 99.091 | 440 | 4 | 0 | 157 | 596 | 1 | 440 | 0.0 | 909 |
| MS.gene39233.t1 | MTR_1g054965 | 98.630 | 292 | 4 | 0 | 209 | 500 | 11 | 302 | 0.0 | 596 |
| MS.gene39233.t1 | MTR_4g134780 | 32.124 | 579 | 323 | 23 | 42 | 584 | 33 | 577 | 1.82e-64 | 222 |
| MS.gene39233.t1 | MTR_8g077580 | 23.936 | 564 | 335 | 18 | 79 | 572 | 22 | 561 | 3.45e-14 | 75.9 |
| MS.gene39233.t1 | MTR_1g034450 | 23.191 | 539 | 338 | 19 | 79 | 555 | 23 | 547 | 4.45e-13 | 72.4 |
| MS.gene39233.t1 | MTR_1g034450 | 25.685 | 292 | 167 | 11 | 304 | 557 | 118 | 397 | 1.01e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39233.t1 | AT1G06820 | 87.849 | 502 | 61 | 0 | 79 | 580 | 78 | 579 | 0.0 | 922 |
| MS.gene39233.t1 | AT1G06820 | 86.588 | 507 | 66 | 1 | 79 | 585 | 78 | 582 | 0.0 | 912 |
| MS.gene39233.t1 | AT1G06820 | 87.330 | 442 | 56 | 0 | 139 | 580 | 19 | 460 | 0.0 | 814 |
| MS.gene39233.t1 | AT1G06820 | 87.204 | 422 | 54 | 0 | 79 | 500 | 78 | 499 | 0.0 | 766 |
| MS.gene39233.t1 | AT1G57770 | 31.343 | 536 | 324 | 18 | 80 | 586 | 54 | 574 | 7.02e-60 | 209 |
| MS.gene39233.t1 | AT5G49555 | 22.719 | 559 | 348 | 18 | 79 | 572 | 14 | 553 | 1.94e-15 | 80.1 |
Find 142 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATTGGTGGGTTGGTTGC+TGG | 0.141035 | 1.1:-42579206 | MS.gene39233:CDS |
| GTTATACCTGGTGGAAGTTC+TGG | 0.145592 | 1.1:-42579134 | MS.gene39233:CDS |
| TGAAAGTTCTCTTCCTCTTT+TGG | 0.238566 | 1.1:+42575191 | None:intergenic |
| AGCATTTGATATTACGGTTT+TGG | 0.254832 | 1.1:+42575379 | None:intergenic |
| GGGTTTGATGCAATTGTTAT+TGG | 0.272864 | 1.1:-42579233 | MS.gene39233:CDS |
| ATTGTAGGAAAGTTAGTAAA+AGG | 0.297392 | 1.1:-42575224 | MS.gene39233:intron |
| TGGGTCTGGGATTGGTGGGT+TGG | 0.303657 | 1.1:-42579213 | MS.gene39233:CDS |
| CAAATGGTGGTAGAAGAAAA+AGG | 0.305219 | 1.1:-42579334 | MS.gene39233:CDS |
| GTGGGATTAACTACCCTCTT+GGG | 0.310382 | 1.1:-42575634 | MS.gene39233:CDS |
| TATATTCACAACTTCTTCAA+TGG | 0.321714 | 1.1:-42574876 | MS.gene39233:CDS |
| GGATTGGTGGGTTGGTTGCT+GGG | 0.332135 | 1.1:-42579205 | MS.gene39233:CDS |
| GATGCAATTGTTATTGGGTC+TGG | 0.348955 | 1.1:-42579227 | MS.gene39233:CDS |
| GCCCGTGACGAGGGTACTTA+TGG | 0.350068 | 1.1:-42574261 | MS.gene39233:CDS |
| TCTGGTAGCATTTGATATTA+CGG | 0.350827 | 1.1:+42575373 | None:intergenic |
| GGTTTGATGCAATTGTTATT+GGG | 0.352695 | 1.1:-42579232 | MS.gene39233:CDS |
| GGCATGCTGCTTGGGTTGCT+TGG | 0.354118 | 1.1:-42573543 | MS.gene39233:CDS |
| CAACTACCTCAAGCACAAAA+TGG | 0.357692 | 1.1:+42575084 | None:intergenic |
| CCAGTTGAATGCTTGACATT+AGG | 0.362918 | 1.1:-42577258 | MS.gene39233:intron |
| CTAGAACAATTGGACCAGTT+TGG | 0.364549 | 1.1:-42574981 | MS.gene39233:intron |
| TGCTGCTTGGGTTGCTTGGT+TGG | 0.365552 | 1.1:-42573539 | MS.gene39233:CDS |
| GTTGGCTCTTCTGTTATGTT+TGG | 0.367913 | 1.1:-42579080 | MS.gene39233:CDS |
| CATCGAGTAGCTGCAGATAT+TGG | 0.371399 | 1.1:-42573987 | MS.gene39233:intron |
| GGCAAAAGGTCTAGTTGATC+AGG | 0.375101 | 1.1:-42575585 | MS.gene39233:CDS |
| GGGTGTGATGGTAGATGATG+GGG | 0.379033 | 1.1:+42579426 | None:intergenic |
| TTATACCTGGTGGAAGTTCT+GGG | 0.379439 | 1.1:-42579133 | MS.gene39233:CDS |
| GTTATTGCTGTAGCTTTCTC+AGG | 0.379480 | 1.1:-42574023 | MS.gene39233:CDS |
| AAGTATCGTCGATGTGTCTT+AGG | 0.386513 | 1.1:+42574285 | None:intergenic |
| GAAGGTAAAGATTGAAACTT+TGG | 0.388568 | 1.1:+42579398 | None:intergenic |
| AGCATTCCAAAGGGGTTGTT+AGG | 0.391726 | 1.1:-42574225 | MS.gene39233:CDS |
| ATTGTTATTGGGTCTGGGAT+TGG | 0.392967 | 1.1:-42579221 | MS.gene39233:CDS |
| TTAGAGAAGAAATTGTTTCC+AGG | 0.395116 | 1.1:-42574608 | MS.gene39233:CDS |
| TCTTTACCTTCATGTAGCTT+TGG | 0.398304 | 1.1:-42579386 | MS.gene39233:CDS |
| AGCATTCACCATAAAATTTG+AGG | 0.398663 | 1.1:+42577465 | None:intergenic |
| TGAAGGATATGACGACCTTC+AGG | 0.399654 | 1.1:+42574899 | None:intergenic |
| TGTGAAAGGTGCAAAAGTTT+TGG | 0.400396 | 1.1:-42579171 | MS.gene39233:CDS |
| TTATTGGGTCTGGGATTGGT+GGG | 0.401354 | 1.1:-42579217 | MS.gene39233:CDS |
| AAACTTACGGTTGTGTTAAA+CGG | 0.405692 | 1.1:+42574198 | None:intergenic |
| GTTGGAGACAGTTGCTTCCC+TGG | 0.408956 | 1.1:-42574053 | MS.gene39233:CDS |
| ATGCAATTGTTATTGGGTCT+GGG | 0.415335 | 1.1:-42579226 | MS.gene39233:CDS |
| GGCATTCCTAACAACCCCTT+TGG | 0.415481 | 1.1:+42574219 | None:intergenic |
| TCCATATGGTTCCTCCAAAC+TGG | 0.419387 | 1.1:+42574967 | None:intergenic |
| TATTATTTGCCTCAAAATGC+TGG | 0.423282 | 1.1:-42576503 | MS.gene39233:CDS |
| TTTGGAATGCTGCGTGGCAT+TGG | 0.424414 | 1.1:+42574237 | None:intergenic |
| TATGTTTGGTTTCAGTGATA+AGG | 0.426067 | 1.1:-42579066 | MS.gene39233:intron |
| CATAGCCAGGAAGTATATTC+AGG | 0.427849 | 1.1:-42576477 | MS.gene39233:CDS |
| GCTACCAGATGGGACACATT+TGG | 0.431536 | 1.1:-42575359 | MS.gene39233:intron |
| AGCAGCATGCCGTCCAAAAC+AGG | 0.432079 | 1.1:+42573555 | None:intergenic |
| TGGATCCTGAATATACTTCC+TGG | 0.432364 | 1.1:+42576472 | None:intergenic |
| GTTATTGGGTCTGGGATTGG+TGG | 0.434710 | 1.1:-42579218 | MS.gene39233:CDS |
| TGGTTAGAAACAGAGAGTAT+AGG | 0.440284 | 1.1:+42579452 | None:intergenic |
| ACTTGCTTTCAGAGCATAGA+TGG | 0.443465 | 1.1:-42574086 | MS.gene39233:intron |
| TGGTACTTATCTAGAACAAT+TGG | 0.444078 | 1.1:-42574991 | MS.gene39233:intron |
| CTAACCAAATGTGTCCCATC+TGG | 0.445008 | 1.1:+42575355 | None:intergenic |
| GGGGTGTGATGGTAGATGAT+GGG | 0.445186 | 1.1:+42579425 | None:intergenic |
| GGTGGGATTAACTACCCTCT+TGG | 0.447475 | 1.1:-42575635 | MS.gene39233:CDS |
| AAATGGTGACAATCTGTATC+TGG | 0.449846 | 1.1:+42575101 | None:intergenic |
| TTCTTCAATGGACGATTGGC+AGG | 0.456294 | 1.1:-42574864 | MS.gene39233:intron |
| ACCAGTTTGGAGGAACCATA+TGG | 0.456800 | 1.1:-42574968 | MS.gene39233:CDS |
| AGTGAAAGGGATGGTGAAGT+TGG | 0.461843 | 1.1:-42579300 | MS.gene39233:CDS |
| AAATGAACAGTTGTCGGATC+AGG | 0.464086 | 1.1:+42577584 | None:intergenic |
| TTATGGAAAGTGGGAAGAGA+GGG | 0.469075 | 1.1:-42579268 | MS.gene39233:CDS |
| AAAATGCTGGAGCCATAGCC+AGG | 0.471308 | 1.1:-42576490 | MS.gene39233:CDS |
| TGGAGTCTGCAAAGCGTTGA+CGG | 0.473220 | 1.1:+42576212 | None:intergenic |
| TCATCTGGGTCACACTCAAA+TGG | 0.475183 | 1.1:-42579350 | MS.gene39233:CDS |
| TGGGGTGTGATGGTAGATGA+TGG | 0.478215 | 1.1:+42579424 | None:intergenic |
| ACCATGCTAGCATTAATCAT+TGG | 0.478809 | 1.1:+42576192 | None:intergenic |
| TGGGATTAACTACCCTCTTG+GGG | 0.481634 | 1.1:-42575633 | MS.gene39233:CDS |
| CCTAATGTCAAGCATTCAAC+TGG | 0.484755 | 1.1:+42577258 | None:intergenic |
| CAACTTGATAACACAAGCAT+TGG | 0.487277 | 1.1:-42577636 | MS.gene39233:CDS |
| ACTTTGGAGGTGGGGTGTGA+TGG | 0.488320 | 1.1:+42579414 | None:intergenic |
| TTTCAATGCTCTGAATTCGT+TGG | 0.490246 | 1.1:-42577334 | MS.gene39233:CDS |
| AAAGATTGAAACTTTGGAGG+TGG | 0.490762 | 1.1:+42579404 | None:intergenic |
| AAGATTGAAACTTTGGAGGT+GGG | 0.491835 | 1.1:+42579405 | None:intergenic |
| CACGAGTATTATCACCGAGC+AGG | 0.494330 | 1.1:-42575534 | MS.gene39233:CDS |
| CAACTTCTTCAATGGACGAT+TGG | 0.495431 | 1.1:-42574868 | MS.gene39233:CDS |
| AGGAGAATCACTGCCAAAAG+AGG | 0.498346 | 1.1:-42575204 | MS.gene39233:CDS |
| ATGTGTATTGAAAGAAAAGA+TGG | 0.502132 | 1.1:+42575149 | None:intergenic |
| GGGACTCAGTTGGCTGTGAA+AGG | 0.502136 | 1.1:-42579185 | MS.gene39233:CDS |
| ATTGCAAAGTCCTTGGCAAA+AGG | 0.507882 | 1.1:-42575599 | MS.gene39233:CDS |
| CTGAATATACTTCCTGGCTA+TGG | 0.509894 | 1.1:+42576478 | None:intergenic |
| CGAATATGAGGCAAAGAAGC+AGG | 0.510443 | 1.1:-42574657 | MS.gene39233:CDS |
| GTTATGGAAAGTGGGAAGAG+AGG | 0.516588 | 1.1:-42579269 | MS.gene39233:CDS |
| AGATTGAAACTTTGGAGGTG+GGG | 0.517468 | 1.1:+42579406 | None:intergenic |
| GTTGGTTGCTGGGACTCAGT+TGG | 0.518251 | 1.1:-42579195 | MS.gene39233:CDS |
| AGATGAAAATGAACAGTTGT+CGG | 0.518578 | 1.1:+42577578 | None:intergenic |
| TTCTACCTCTATAAAATCGA+TGG | 0.521134 | 1.1:+42574574 | None:intergenic |
| ACTCGAACAGAGAGGTGGTT+TGG | 0.522462 | 1.1:+42577554 | None:intergenic |
| GAACAATTGGACCAGTTTGG+AGG | 0.525975 | 1.1:-42574978 | MS.gene39233:CDS |
| GAAAGGGATGGTGAAGTTGG+AGG | 0.529091 | 1.1:-42579297 | MS.gene39233:CDS |
| ATGCCACGCAGCATTCCAAA+GGG | 0.532817 | 1.1:-42574234 | MS.gene39233:CDS |
| ATAGATGGTCTTTACTGTGT+TGG | 0.534434 | 1.1:-42574071 | MS.gene39233:CDS |
| ACTTACGGCTTTGCCCTGCT+CGG | 0.535017 | 1.1:+42575520 | None:intergenic |
| GACAGTTGCTTCCCTGGACA+AGG | 0.535454 | 1.1:-42574047 | MS.gene39233:CDS |
| AGGGTATTGATGAAAGTGAA+AGG | 0.535518 | 1.1:-42579314 | MS.gene39233:CDS |
| TGTGTGACAGACACTTTGGT+GGG | 0.539652 | 1.1:-42575652 | MS.gene39233:CDS |
| AAGAAGTTGTGAATATATGA+AGG | 0.541078 | 1.1:+42574882 | None:intergenic |
| ACAGCAATAACACCTTGTCC+AGG | 0.542134 | 1.1:+42574035 | None:intergenic |
| GTCCATAAGTACCCTCGTCA+CGG | 0.543450 | 1.1:+42574259 | None:intergenic |
| GCTTGGTTGGTTAAGAACAT+TGG | 0.543596 | 1.1:-42573526 | MS.gene39233:CDS |
| GGTAAAGATTGAAACTTTGG+AGG | 0.544715 | 1.1:+42579401 | None:intergenic |
| TTGGAGAAGTATGTTATACC+TGG | 0.544910 | 1.1:-42579146 | MS.gene39233:CDS |
| TCGATGGATGATCTAAGACC+TGG | 0.552826 | 1.1:+42574590 | None:intergenic |
| TCCAATGATTAATGCTAGCA+TGG | 0.556512 | 1.1:-42576193 | MS.gene39233:intron |
| TAATATCAAATGCTACCAGA+TGG | 0.557408 | 1.1:-42575370 | MS.gene39233:CDS |
| GGGTATTGATGAAAGTGAAA+GGG | 0.560886 | 1.1:-42579313 | MS.gene39233:CDS |
| TCTCTCAAGAATCGAATATG+AGG | 0.561899 | 1.1:-42574669 | MS.gene39233:CDS |
| ACACAAGCATTGGAAGCAGT+TGG | 0.564007 | 1.1:-42577626 | MS.gene39233:CDS |
| GGAAGCAGTTGGTTGTCAGA+TGG | 0.564032 | 1.1:-42577615 | MS.gene39233:CDS |
| TGGTGGGATTGCAAAGTCCT+TGG | 0.575419 | 1.1:-42575606 | MS.gene39233:CDS |
| TCCATAAGTACCCTCGTCAC+GGG | 0.581708 | 1.1:+42574260 | None:intergenic |
| TATGGAAAGTGGGAAGAGAG+GGG | 0.584235 | 1.1:-42579267 | MS.gene39233:CDS |
| GCTCTTCCAAAGCTACATGA+AGG | 0.584743 | 1.1:+42579380 | None:intergenic |
| GTTCTGTGTGACAGACACTT+TGG | 0.585250 | 1.1:-42575656 | MS.gene39233:CDS |
| AATGATGAATCAAGTATAGT+CGG | 0.590388 | 1.1:+42574926 | None:intergenic |
| AATATCAAATGCTACCAGAT+GGG | 0.590986 | 1.1:-42575369 | MS.gene39233:CDS |
| AATGCCACGCAGCATTCCAA+AGG | 0.592149 | 1.1:-42574235 | MS.gene39233:CDS |
| GATTCATCATTAGCTCCTGA+AGG | 0.593456 | 1.1:-42574914 | MS.gene39233:CDS |
| CTGTGTGACAGACACTTTGG+TGG | 0.593994 | 1.1:-42575653 | MS.gene39233:CDS |
| ACGAGTATTATCACCGAGCA+GGG | 0.595181 | 1.1:-42575533 | MS.gene39233:CDS |
| GTAGGAGTGAGGCTTTCAGA+TGG | 0.611899 | 1.1:-42575416 | MS.gene39233:CDS |
| GGTGTGATGGTAGATGATGG+GGG | 0.615243 | 1.1:+42579427 | None:intergenic |
| GTTGGAGCTAAAATCGCTTG+AGG | 0.617285 | 1.1:-42577316 | MS.gene39233:CDS |
| GGGATTAACTACCCTCTTGG+GGG | 0.619406 | 1.1:-42575632 | MS.gene39233:CDS |
| AGCAGTTGGTTGTCAGATGG+AGG | 0.621877 | 1.1:-42577612 | MS.gene39233:CDS |
| GGGTAGTCAGATACTTTACA+AGG | 0.622656 | 1.1:-42575564 | MS.gene39233:CDS |
| GCAAAAGGTCTAGTTGATCA+GGG | 0.623548 | 1.1:-42575584 | MS.gene39233:CDS |
| GAGAAGTATGTTATACCTGG+TGG | 0.624831 | 1.1:-42579143 | MS.gene39233:CDS |
| CAGCAATAACACCTTGTCCA+GGG | 0.633374 | 1.1:+42574036 | None:intergenic |
| TAAAACCCAGAACTTCCACC+AGG | 0.645610 | 1.1:+42579128 | None:intergenic |
| ACGATACTTAGCCCGTGACG+AGG | 0.654000 | 1.1:-42574271 | MS.gene39233:CDS |
| GTTGTCTTTCATAGATGCCG+AGG | 0.659599 | 1.1:-42576444 | MS.gene39233:intron |
| GAGTATAGGAGAATTGAGCA+TGG | 0.660806 | 1.1:+42579466 | None:intergenic |
| TGTGCACTCGAACAGAGAGG+TGG | 0.665428 | 1.1:+42577549 | None:intergenic |
| CGATACTTAGCCCGTGACGA+GGG | 0.667190 | 1.1:-42574270 | MS.gene39233:CDS |
| AACCCCTTTGGAATGCTGCG+TGG | 0.680893 | 1.1:+42574231 | None:intergenic |
| TCTGGGTCACACTCAAATGG+TGG | 0.685359 | 1.1:-42579347 | MS.gene39233:CDS |
| TCTATGAAAGACAACAACTG+TGG | 0.688384 | 1.1:+42576452 | None:intergenic |
| CTCTGTGCACTCGAACAGAG+AGG | 0.688933 | 1.1:+42577546 | None:intergenic |
| ATATGAGGCAAAGAAGCAGG+TGG | 0.709650 | 1.1:-42574654 | MS.gene39233:CDS |
| ATTGATGAAAGTGAAAGGGA+TGG | 0.714978 | 1.1:-42579309 | MS.gene39233:CDS |
| TGGTGACAATCTGTATCTGG+TGG | 0.718339 | 1.1:+42575104 | None:intergenic |
| TGCCACGCAGCATTCCAAAG+GGG | 0.750458 | 1.1:-42574233 | MS.gene39233:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTAATTACAAAAG+CGG | + | chr1.1:42575600-42575619 | None:intergenic | 10.0% |
| !!! | ATTATTTTAAAGTAAACTTA+CGG | + | chr1.1:42578803-42578822 | None:intergenic | 10.0% |
| !! | AAAAAGATGTAACATTATTA+CGG | - | chr1.1:42576272-42576291 | MS.gene39233:intron | 15.0% |
| !! | AAAATTAATCAAATAAGAAG+CGG | + | chr1.1:42577301-42577320 | None:intergenic | 15.0% |
| !! | ACTTATAATTCAAATAATTG+AGG | - | chr1.1:42575913-42575932 | MS.gene39233:intron | 15.0% |
| !! | AGCTTATACATAAAAAAAAA+GGG | - | chr1.1:42574134-42574153 | MS.gene39233:intron | 15.0% |
| !! | CATTTATTATGAAAATAATG+TGG | + | chr1.1:42576641-42576660 | None:intergenic | 15.0% |
| !! | CTTATAATTCAAATAATTGA+GGG | - | chr1.1:42575914-42575933 | MS.gene39233:intron | 15.0% |
| !! | GTTTATATAAGAAATTCATA+GGG | - | chr1.1:42574586-42574605 | MS.gene39233:CDS | 15.0% |
| !! | TAATATATTAAATGAGTGTT+TGG | + | chr1.1:42579274-42579293 | None:intergenic | 15.0% |
| !! | TAATTATTGTTTATGTTGAA+TGG | - | chr1.1:42575266-42575285 | MS.gene39233:intron | 15.0% |
| !! | TAGCTTATACATAAAAAAAA+AGG | - | chr1.1:42574133-42574152 | MS.gene39233:intron | 15.0% |
| !! | TTATAATTCAAATAATTGAG+GGG | - | chr1.1:42575915-42575934 | MS.gene39233:intron | 15.0% |
| !! | TTATTATTAAAAAATAGGGT+TGG | - | chr1.1:42579396-42579415 | MS.gene39233:CDS | 15.0% |
| !!! | AATGTATTTTATCTTTTTCA+TGG | - | chr1.1:42575125-42575144 | MS.gene39233:CDS | 15.0% |
| !!! | AATTATTTTTGTATTTGTCT+AGG | - | chr1.1:42574951-42574970 | MS.gene39233:CDS | 15.0% |
| !!! | AGATTTCAACTTTATTTTAT+TGG | + | chr1.1:42578170-42578189 | None:intergenic | 15.0% |
| !!! | ATCAATATTTTCATATGATT+TGG | - | chr1.1:42576418-42576437 | MS.gene39233:intron | 15.0% |
| !! | AAAAGATGTAACATTATTAC+GGG | - | chr1.1:42576273-42576292 | MS.gene39233:intron | 20.0% |
| !! | AAAATACAGCAAAATTAATG+AGG | + | chr1.1:42578450-42578469 | None:intergenic | 20.0% |
| !! | AAAATTTGCAACACATTTAT+AGG | - | chr1.1:42574499-42574518 | MS.gene39233:intron | 20.0% |
| !! | AAAGAAATTGCTCAATTTAT+AGG | - | chr1.1:42574562-42574581 | MS.gene39233:intron | 20.0% |
| !! | AAATTAATCAAATAAGAAGC+GGG | + | chr1.1:42577300-42577319 | None:intergenic | 20.0% |
| !! | AAATTTGCAACACATTTATA+GGG | - | chr1.1:42574500-42574519 | MS.gene39233:intron | 20.0% |
| !! | AAGAAATTGCTCAATTTATA+GGG | - | chr1.1:42574563-42574582 | MS.gene39233:intron | 20.0% |
| !! | AATGCAATTGAAAATTTGAA+AGG | - | chr1.1:42576317-42576336 | MS.gene39233:intron | 20.0% |
| !! | ACACATAAATAATCAAGATT+TGG | + | chr1.1:42578627-42578646 | None:intergenic | 20.0% |
| !! | ATGCAATTGAAAATTTGAAA+GGG | - | chr1.1:42576318-42576337 | MS.gene39233:intron | 20.0% |
| !! | GGTTTATATAAGAAATTCAT+AGG | - | chr1.1:42574585-42574604 | MS.gene39233:CDS | 20.0% |
| !! | TAAAATAATGATTCAATGAC+AGG | - | chr1.1:42578814-42578833 | MS.gene39233:intron | 20.0% |
| !! | TATTGTGCTTATATATTAGT+AGG | + | chr1.1:42574977-42574996 | None:intergenic | 20.0% |
| !! | TTAAAAGTCTATATTTGTCA+TGG | - | chr1.1:42575622-42575641 | MS.gene39233:CDS | 20.0% |
| !! | TTTCTTAAATTACTTCTCAT+AGG | + | chr1.1:42575088-42575107 | None:intergenic | 20.0% |
| !!! | ACAAGAAATTGCAAAAATTT+TGG | - | chr1.1:42574615-42574634 | MS.gene39233:CDS | 20.0% |
| !!! | ACTAATACTACCTTTAAAAT+TGG | + | chr1.1:42575813-42575832 | None:intergenic | 20.0% |
| !!! | ATTTGTTTGTTTTGAATATG+AGG | - | chr1.1:42575764-42575783 | MS.gene39233:intron | 20.0% |
| !!! | ATTTTCATTCATAAAATCTC+TGG | - | chr1.1:42576726-42576745 | MS.gene39233:intron | 20.0% |
| !!! | CAAGAAATTGCAAAAATTTT+GGG | - | chr1.1:42574616-42574635 | MS.gene39233:CDS | 20.0% |
| !!! | CTGTTTTCATTTTAAGTTAT+AGG | + | chr1.1:42574787-42574806 | None:intergenic | 20.0% |
| !!! | CTTCTCTCTTTTTTTTTTTT+TGG | + | chr1.1:42578549-42578568 | None:intergenic | 20.0% |
| !!! | TCTTTTCATCATTTTAGAAT+CGG | + | chr1.1:42577141-42577160 | None:intergenic | 20.0% |
| ! | AAAATTAATTACAAAAGCGG+AGG | + | chr1.1:42575597-42575616 | None:intergenic | 25.0% |
| ! | AAGAAGTTGTGAATATATGA+AGG | + | chr1.1:42578106-42578125 | None:intergenic | 25.0% |
| ! | AAGACAAATTATGTCTTCTA+GGG | + | chr1.1:42578524-42578543 | None:intergenic | 25.0% |
| ! | AATATTCTATGTTAGCATCA+AGG | - | chr1.1:42574993-42575012 | MS.gene39233:intron | 25.0% |
| ! | AATGATGAATCAAGTATAGT+CGG | + | chr1.1:42578062-42578081 | None:intergenic | 25.0% |
| ! | AATTTGCAACACATTTATAG+GGG | - | chr1.1:42574501-42574520 | MS.gene39233:intron | 25.0% |
| ! | AGAAATTGCTCAATTTATAG+GGG | - | chr1.1:42574564-42574583 | MS.gene39233:intron | 25.0% |
| ! | AGGCAAATGAATAAAAAAGA+AGG | + | chr1.1:42578245-42578264 | None:intergenic | 25.0% |
| ! | ATGTACCTTAAATTTGTGTA+GGG | - | chr1.1:42575320-42575339 | MS.gene39233:intron | 25.0% |
| ! | ATGTGTATTGAAAGAAAAGA+TGG | + | chr1.1:42577839-42577858 | None:intergenic | 25.0% |
| ! | ATTGTAGGAAAGTTAGTAAA+AGG | - | chr1.1:42577761-42577780 | MS.gene39233:intron | 25.0% |
| ! | ATTTAAGAAACCAAGAACAA+AGG | - | chr1.1:42575098-42575117 | MS.gene39233:CDS | 25.0% |
| ! | CAGAAATCAATATTTACCTA+AGG | + | chr1.1:42575173-42575192 | None:intergenic | 25.0% |
| ! | CATTGAAATAAACAAAAGCA+CGG | + | chr1.1:42579246-42579265 | None:intergenic | 25.0% |
| ! | GAATGAAAATTACTAATCAC+AGG | + | chr1.1:42576716-42576735 | None:intergenic | 25.0% |
| ! | GAATGATTAATGAATGAGTA+GGG | + | chr1.1:42576683-42576702 | None:intergenic | 25.0% |
| ! | GATTCTTTCAAAATCTATCA+CGG | + | chr1.1:42574765-42574784 | None:intergenic | 25.0% |
| ! | GCTATATAGATTTATAGTTG+AGG | + | chr1.1:42577934-42577953 | None:intergenic | 25.0% |
| ! | TATAAAAAGGAGGTAGTATA+TGG | - | chr1.1:42576345-42576364 | MS.gene39233:intron | 25.0% |
| ! | TATATTCACAACTTCTTCAA+TGG | - | chr1.1:42578109-42578128 | MS.gene39233:intron | 25.0% |
| ! | TATTGATACAATGCTCAATT+AGG | + | chr1.1:42576405-42576424 | None:intergenic | 25.0% |
| ! | TCAATTTGGTCCTATATTTA+GGG | + | chr1.1:42576121-42576140 | None:intergenic | 25.0% |
| ! | TCATTCATTCAAAGTTATCA+AGG | + | chr1.1:42577956-42577975 | None:intergenic | 25.0% |
| ! | TGAATGATTAATGAATGAGT+AGG | + | chr1.1:42576684-42576703 | None:intergenic | 25.0% |
| ! | TGACATATTTATATCGTGTT+TGG | - | chr1.1:42579149-42579168 | MS.gene39233:CDS | 25.0% |
| ! | TGACTCTTTCTATGAAAAAT+AGG | + | chr1.1:42576605-42576624 | None:intergenic | 25.0% |
| ! | TGCAATTGAAAATTTGAAAG+GGG | - | chr1.1:42576319-42576338 | MS.gene39233:intron | 25.0% |
| !! | AAAAAGCTTTTAACAACGTA+TGG | + | chr1.1:42578480-42578499 | None:intergenic | 25.0% |
| !! | ACTCATTTGAATGTAGTTTT+AGG | + | chr1.1:42579181-42579200 | None:intergenic | 25.0% |
| !! | ATCTTTTCTTTCAATACACA+TGG | - | chr1.1:42577838-42577857 | MS.gene39233:intron | 25.0% |
| !! | ATTTGATTAATTTTGTGTCC+AGG | - | chr1.1:42577307-42577326 | MS.gene39233:CDS | 25.0% |
| !! | GATAACTTTTTGTATTTCAC+TGG | - | chr1.1:42577974-42577993 | MS.gene39233:intron | 25.0% |
| !! | TCTAAGATAGCTTATGAAAA+CGG | - | chr1.1:42574058-42574077 | MS.gene39233:CDS | 25.0% |
| !! | TCTTTGCATTTTCATTGATA+GGG | - | chr1.1:42575856-42575875 | MS.gene39233:intron | 25.0% |
| !! | TCTTTTCTTTCAATACACAT+GGG | - | chr1.1:42577839-42577858 | MS.gene39233:intron | 25.0% |
| !! | TGATGATGTACGTTATTATA+TGG | - | chr1.1:42576454-42576473 | MS.gene39233:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr1.1:42574386-42574405 | MS.gene39233:intron | 25.0% |
| !! | TTCTTTGCATTTTCATTGAT+AGG | - | chr1.1:42575855-42575874 | MS.gene39233:intron | 25.0% |
| !!! | AAAGGTAATTTTTGAAGTCA+TGG | + | chr1.1:42578211-42578230 | None:intergenic | 25.0% |
| !!! | AGGACTTTCCTTTTTAATTA+GGG | + | chr1.1:42575068-42575087 | None:intergenic | 25.0% |
| !!! | ATGTATAAGCTAGTTCTATA+GGG | + | chr1.1:42574125-42574144 | None:intergenic | 25.0% |
| !!! | ATTTTGAGATTTACATGTAC+AGG | + | chr1.1:42578265-42578284 | None:intergenic | 25.0% |
| !!! | TACCTTTAAAATTGGAGTTT+GGG | + | chr1.1:42575805-42575824 | None:intergenic | 25.0% |
| !!! | TAGGACTTTCCTTTTTAATT+AGG | + | chr1.1:42575069-42575088 | None:intergenic | 25.0% |
| !!! | TATGTATAAGCTAGTTCTAT+AGG | + | chr1.1:42574126-42574145 | None:intergenic | 25.0% |
| !!! | TGCTTTTGTTTATTTCAATG+TGG | - | chr1.1:42579246-42579265 | MS.gene39233:CDS | 25.0% |
| AAACACTTGTGATCTTGTTA+GGG | - | chr1.1:42574674-42574693 | MS.gene39233:CDS | 30.0% | |
| AAACTTACGGTTGTGTTAAA+CGG | + | chr1.1:42578790-42578809 | None:intergenic | 30.0% | |
| AAATATAGGACCAAATTGAC+CGG | - | chr1.1:42576122-42576141 | MS.gene39233:intron | 30.0% | |
| AAATGGTGGTAGAAGAAAAA+GGG | - | chr1.1:42573652-42573671 | MS.gene39233:intron | 30.0% | |
| AATATCAAATGCTACCAGAT+GGG | - | chr1.1:42577616-42577635 | MS.gene39233:CDS | 30.0% | |
| AATGAAGGTAGACAAAAAAC+AGG | + | chr1.1:42577710-42577729 | None:intergenic | 30.0% | |
| AATGTAACATTATGCAGTTC+GGG | + | chr1.1:42577744-42577763 | None:intergenic | 30.0% | |
| ACTGCATAATGTTACATTGT+AGG | - | chr1.1:42577746-42577765 | MS.gene39233:intron | 30.0% | |
| AGAGTTCAATGTTATAGTGA+AGG | - | chr1.1:42573996-42574015 | MS.gene39233:CDS | 30.0% | |
| AGATGAAAATGAACAGTTGT+CGG | + | chr1.1:42575410-42575429 | None:intergenic | 30.0% | |
| AGCATTCACCATAAAATTTG+AGG | + | chr1.1:42575523-42575542 | None:intergenic | 30.0% | |
| AGGAAAAAGTTATGGAAAGT+GGG | - | chr1.1:42573708-42573727 | MS.gene39233:intron | 30.0% | |
| AGTACAATAAGAACATTGCA+TGG | + | chr1.1:42576853-42576872 | None:intergenic | 30.0% | |
| ATAAGCTAGAAAACAACTGA+TGG | + | chr1.1:42574729-42574748 | None:intergenic | 30.0% | |
| ATGAAAGAAAGCAAAAAGCT+AGG | + | chr1.1:42576829-42576848 | None:intergenic | 30.0% | |
| ATGCAACTAAAAGCAATGAA+AGG | + | chr1.1:42576907-42576926 | None:intergenic | 30.0% | |
| ATTCAAATGAGTTTCAACGT+GGG | - | chr1.1:42579189-42579208 | MS.gene39233:CDS | 30.0% | |
| CAAGACAAATTATGTCTTCT+AGG | + | chr1.1:42578525-42578544 | None:intergenic | 30.0% | |
| CAATGTAACATTATGCAGTT+CGG | + | chr1.1:42577745-42577764 | None:intergenic | 30.0% | |
| CATGTACCTTAAATTTGTGT+AGG | - | chr1.1:42575319-42575338 | MS.gene39233:intron | 30.0% | |
| CGGGATTAACTAATTAATGA+AGG | + | chr1.1:42577725-42577744 | None:intergenic | 30.0% | |
| CTACTTCTCCCTAATTAAAA+AGG | - | chr1.1:42575057-42575076 | MS.gene39233:intron | 30.0% | |
| CTCAAAAAGATACTTCCATA+TGG | + | chr1.1:42578035-42578054 | None:intergenic | 30.0% | |
| GAAGGTAAAGATTGAAACTT+TGG | + | chr1.1:42573590-42573609 | None:intergenic | 30.0% | |
| GATTACCCTACACAAATTTA+AGG | + | chr1.1:42575328-42575347 | None:intergenic | 30.0% | |
| GGTTTACATAAGAAATTGCA+AGG | - | chr1.1:42574522-42574541 | MS.gene39233:intron | 30.0% | |
| GTCAATTTGGTCCTATATTT+AGG | + | chr1.1:42576122-42576141 | None:intergenic | 30.0% | |
| TAAACACTTGTGATCTTGTT+AGG | - | chr1.1:42574673-42574692 | MS.gene39233:CDS | 30.0% | |
| TAATATCAAATGCTACCAGA+TGG | - | chr1.1:42577615-42577634 | MS.gene39233:CDS | 30.0% | |
| TACATCATCAGAAAAGCAAA+TGG | + | chr1.1:42576444-42576463 | None:intergenic | 30.0% | |
| TACATTTACACCTTTGTTCT+TGG | + | chr1.1:42575111-42575130 | None:intergenic | 30.0% | |
| TATTATTTGCCTCAAAATGC+TGG | - | chr1.1:42576482-42576501 | MS.gene39233:CDS | 30.0% | |
| TCTGAAAAAACTGTCCAAAA+AGG | + | chr1.1:42575705-42575724 | None:intergenic | 30.0% | |
| TCTGGTAGCATTTGATATTA+CGG | + | chr1.1:42577615-42577634 | None:intergenic | 30.0% | |
| TGCAACTAAAAGCAATGAAA+GGG | + | chr1.1:42576906-42576925 | None:intergenic | 30.0% | |
| TTAGAGAAGAAATTGTTTCC+AGG | - | chr1.1:42578377-42578396 | MS.gene39233:intron | 30.0% | |
| TTCTACCTCTATAAAATCGA+TGG | + | chr1.1:42578414-42578433 | None:intergenic | 30.0% | |
| TTGAGGGGAAACTAAATAAA+CGG | - | chr1.1:42575930-42575949 | MS.gene39233:intron | 30.0% | |
| ! | AAATTGCAAAAATTTTGGGC+CGG | - | chr1.1:42574620-42574639 | MS.gene39233:CDS | 30.0% |
| ! | AGCATTTGATATTACGGTTT+TGG | + | chr1.1:42577609-42577628 | None:intergenic | 30.0% |
| ! | ATTTTCATTGATAGGGACTA+GGG | - | chr1.1:42575863-42575882 | MS.gene39233:intron | 30.0% |
| ! | CTACACAAATTTAAGGTACA+TGG | + | chr1.1:42575321-42575340 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCAATACACATG+GGG | - | chr1.1:42577840-42577859 | MS.gene39233:intron | 30.0% |
| ! | GACAAAAAAGCATACAATGT+TGG | + | chr1.1:42576994-42577013 | None:intergenic | 30.0% |
| ! | GATTTGTACTATACTTTTGC+AGG | - | chr1.1:42577547-42577566 | MS.gene39233:CDS | 30.0% |
| ! | GGTTTGATGCAATTGTTATT+GGG | - | chr1.1:42573753-42573772 | MS.gene39233:intron | 30.0% |
| ! | GTAATCTGATATGTCACTTA+CGG | + | chr1.1:42577483-42577502 | None:intergenic | 30.0% |
| ! | TATGTTTGGTTTCAGTGATA+AGG | - | chr1.1:42573919-42573938 | MS.gene39233:intron | 30.0% |
| ! | TCAAATTTTATGGTGAATGC+TGG | - | chr1.1:42575522-42575541 | MS.gene39233:intron | 30.0% |
| ! | TGGTACTTATCTAGAACAAT+TGG | - | chr1.1:42577994-42578013 | MS.gene39233:intron | 30.0% |
| ! | TGTCTTGGTAACTATACAAA+TGG | - | chr1.1:42577010-42577029 | MS.gene39233:intron | 30.0% |
| ! | TTGAAAGGGGTCTTATAAAA+AGG | - | chr1.1:42576332-42576351 | MS.gene39233:intron | 30.0% |
| ! | TTTATCCAAACATGGCTTTA+AGG | - | chr1.1:42574394-42574413 | MS.gene39233:intron | 30.0% |
| ! | TTTTCTTTCAATACACATGG+GGG | - | chr1.1:42577841-42577860 | MS.gene39233:intron | 30.0% |
| !! | AAGTTATTTTCCCCATGAAA+AGG | - | chr1.1:42575490-42575509 | MS.gene39233:intron | 30.0% |
| !! | CTACCTTTAAAATTGGAGTT+TGG | + | chr1.1:42575806-42575825 | None:intergenic | 30.0% |
| !! | GCTTTAAGGTTTGTTTAGAT+TGG | - | chr1.1:42574408-42574427 | MS.gene39233:intron | 30.0% |
| !! | TGTATAAGCTAGTTCTATAG+GGG | + | chr1.1:42574329-42574348 | None:intergenic | 30.0% |
| !! | TTCATTGCTTTTAGTTGCAT+TGG | - | chr1.1:42576907-42576926 | MS.gene39233:intron | 30.0% |
| !!! | AAGTTCTGGGTTTTATCATA+GGG | - | chr1.1:42573865-42573884 | MS.gene39233:intron | 30.0% |
| !!! | AGCATTTTGAGGCAAATAAT+AGG | + | chr1.1:42576483-42576502 | None:intergenic | 30.0% |
| !!! | ATCATCCATCGATTTTATAG+AGG | - | chr1.1:42578406-42578425 | MS.gene39233:intron | 30.0% |
| !!! | ATGTTCTTGTTTTCTGTTCT+AGG | - | chr1.1:42578292-42578311 | MS.gene39233:intron | 30.0% |
| !!! | CATTGTATGCTTTTTTGTCT+TGG | - | chr1.1:42576995-42577014 | MS.gene39233:intron | 30.0% |
| !!! | TGTTCTTGTTTTCTGTTCTA+GGG | - | chr1.1:42578293-42578312 | MS.gene39233:intron | 30.0% |
| !!! | TGTTGCAAATTTTTTTTGCC+CGG | + | chr1.1:42574492-42574511 | None:intergenic | 30.0% |
| AAACTCATTCTCTCTCTTGA+AGG | + | chr1.1:42576218-42576237 | None:intergenic | 35.0% | |
| AAAGCATACAATGTTGGACT+TGG | + | chr1.1:42576988-42577007 | None:intergenic | 35.0% | |
| AAATGCAAAGAAGATATGCC+AGG | + | chr1.1:42575847-42575866 | None:intergenic | 35.0% | |
| AAATGGTGACAATCTGTATC+TGG | + | chr1.1:42577887-42577906 | None:intergenic | 35.0% | |
| AACTCATTCTCTCTCTTGAA+GGG | + | chr1.1:42576217-42576236 | None:intergenic | 35.0% | |
| AAGTGAAGCAGTATTACTCT+TGG | - | chr1.1:42575999-42576018 | MS.gene39233:intron | 35.0% | |
| AATCTATCACGGAGAACTTA+TGG | + | chr1.1:42574754-42574773 | None:intergenic | 35.0% | |
| ACAAACCTTAAAGCCATGTT+TGG | + | chr1.1:42574402-42574421 | None:intergenic | 35.0% | |
| ACCATGCTAGCATTAATCAT+TGG | + | chr1.1:42576796-42576815 | None:intergenic | 35.0% | |
| AGCAAAATTAATGAGGTCAG+AGG | + | chr1.1:42578443-42578462 | None:intergenic | 35.0% | |
| AGTTATTCGATTCTGTCAGA+AGG | - | chr1.1:42576575-42576594 | MS.gene39233:intron | 35.0% | |
| ATAACTAGTTGCATCTACCT+CGG | + | chr1.1:42576561-42576580 | None:intergenic | 35.0% | |
| ATAGATGGTCTTTACTGTGT+TGG | - | chr1.1:42578914-42578933 | MS.gene39233:intron | 35.0% | |
| ATTGATGAAAGTGAAAGGGA+TGG | - | chr1.1:42573676-42573695 | MS.gene39233:intron | 35.0% | |
| CAAATGGTGGTAGAAGAAAA+AGG | - | chr1.1:42573651-42573670 | MS.gene39233:intron | 35.0% | |
| CATAAAAAAAAAGGGCAACC+CGG | - | chr1.1:42574142-42574161 | MS.gene39233:intron | 35.0% | |
| CATTCAAATGAGTTTCAACG+TGG | - | chr1.1:42579188-42579207 | MS.gene39233:CDS | 35.0% | |
| CCTTAGTCAATAATAGCTTG+AGG | - | chr1.1:42575233-42575252 | MS.gene39233:intron | 35.0% | |
| CGTACACAACAATGAAAGAA+TGG | + | chr1.1:42577081-42577100 | None:intergenic | 35.0% | |
| GAAGTTGGAGGAAAAAGTTA+TGG | - | chr1.1:42573700-42573719 | MS.gene39233:intron | 35.0% | |
| GAGGAAAAAGTTATGGAAAG+TGG | - | chr1.1:42573707-42573726 | MS.gene39233:intron | 35.0% | |
| GGGTTTGATGCAATTGTTAT+TGG | - | chr1.1:42573752-42573771 | MS.gene39233:intron | 35.0% | |
| GGTAAAGATTGAAACTTTGG+AGG | + | chr1.1:42573587-42573606 | None:intergenic | 35.0% | |
| GGTTGTCTACCATATGAATT+CGG | + | chr1.1:42576039-42576058 | None:intergenic | 35.0% | |
| GTTGTCTACCATATGAATTC+GGG | + | chr1.1:42576038-42576057 | None:intergenic | 35.0% | |
| TAACATTATTACGGGTTTGC+TGG | - | chr1.1:42576281-42576300 | MS.gene39233:intron | 35.0% | |
| TACCTAATAGCATAAACCAG+TGG | - | chr1.1:42574443-42574462 | MS.gene39233:intron | 35.0% | |
| TATTTACCTAAGGCAACTCA+TGG | + | chr1.1:42575163-42575182 | None:intergenic | 35.0% | |
| TCCAATGATTAATGCTAGCA+TGG | - | chr1.1:42576792-42576811 | MS.gene39233:intron | 35.0% | |
| TCTATGAAAGACAACAACTG+TGG | + | chr1.1:42576536-42576555 | None:intergenic | 35.0% | |
| TCTCTCAAGAATCGAATATG+AGG | - | chr1.1:42578316-42578335 | MS.gene39233:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1.1:42574234-42574253 | None:intergenic | 35.0% | |
| TCTTTACCTTCATGTAGCTT+TGG | - | chr1.1:42573599-42573618 | MS.gene39233:intron | 35.0% | |
| TGGAAGGTTTGTCTTAATTG+AGG | - | chr1.1:42575542-42575561 | MS.gene39233:CDS | 35.0% | |
| TTGCAAACAGTTTACAGCTA+TGG | + | chr1.1:42579044-42579063 | None:intergenic | 35.0% | |
| ! | AAAGATTGAAACTTTGGAGG+TGG | + | chr1.1:42573584-42573603 | None:intergenic | 35.0% |
| ! | AAAGGGGTCTTATAAAAAGG+AGG | - | chr1.1:42576335-42576354 | MS.gene39233:intron | 35.0% |
| ! | AAGAAGGCACAGCATAAAAA+AGG | + | chr1.1:42578229-42578248 | None:intergenic | 35.0% |
| ! | AAGATTGAAACTTTGGAGGT+GGG | + | chr1.1:42573583-42573602 | None:intergenic | 35.0% |
| ! | AGGCCATTGTTATTAGTTAG+TGG | - | chr1.1:42575013-42575032 | MS.gene39233:intron | 35.0% |
| ! | AGGGACTAATTGTTTCTTTC+TGG | - | chr1.1:42574894-42574913 | MS.gene39233:CDS | 35.0% |
| ! | ATGCAATTGTTATTGGGTCT+GGG | - | chr1.1:42573759-42573778 | MS.gene39233:intron | 35.0% |
| ! | ATTTTATGGTGAATGCTGGA+AGG | - | chr1.1:42575526-42575545 | MS.gene39233:CDS | 35.0% |
| ! | CAACTTGATAACACAAGCAT+TGG | - | chr1.1:42575349-42575368 | MS.gene39233:intron | 35.0% |
| ! | CATTGTTGTGTACGATGTTT+TGG | - | chr1.1:42577087-42577106 | MS.gene39233:intron | 35.0% |
| ! | CATTTTCATTGATAGGGACT+AGG | - | chr1.1:42575862-42575881 | MS.gene39233:intron | 35.0% |
| ! | CCTCAAGCTATTATTGACTA+AGG | + | chr1.1:42575236-42575255 | None:intergenic | 35.0% |
| ! | CTCCCAAACTCCAATTTTAA+AGG | - | chr1.1:42575800-42575819 | MS.gene39233:intron | 35.0% |
| ! | GAAGAGCTGAATTTTCATCT+GGG | - | chr1.1:42573621-42573640 | MS.gene39233:intron | 35.0% |
| ! | GTGCCACTAACTAATAACAA+TGG | + | chr1.1:42575019-42575038 | None:intergenic | 35.0% |
| ! | TATTAGTTTCTATTGCCACC+TGG | - | chr1.1:42575826-42575845 | MS.gene39233:intron | 35.0% |
| ! | TATTTTCCCCATGAAAAGGA+CGG | - | chr1.1:42575494-42575513 | MS.gene39233:intron | 35.0% |
| ! | TGAAAGTTCTCTTCCTCTTT+TGG | + | chr1.1:42577797-42577816 | None:intergenic | 35.0% |
| ! | TGGTTAGAAACAGAGAGTAT+AGG | + | chr1.1:42573536-42573555 | None:intergenic | 35.0% |
| ! | TGTACTATACTTTTGCAGGT+AGG | - | chr1.1:42577551-42577570 | MS.gene39233:CDS | 35.0% |
| ! | TTGGAGAAGTATGTTATACC+TGG | - | chr1.1:42573839-42573858 | MS.gene39233:intron | 35.0% |
| ! | TTTCAATGCTCTGAATTCGT+TGG | - | chr1.1:42575651-42575670 | MS.gene39233:CDS | 35.0% |
| ! | TTTGGTTTCAGTGATAAGGT+TGG | - | chr1.1:42573923-42573942 | MS.gene39233:intron | 35.0% |
| !! | AAAAAGTCACCTGTTTTGGA+CGG | - | chr1.1:42579421-42579440 | MS.gene39233:CDS | 35.0% |
| !! | AGGGTATTGATGAAAGTGAA+AGG | - | chr1.1:42573671-42573690 | MS.gene39233:intron | 35.0% |
| !! | GCTATGCTTTAGAAATGGAA+TGG | - | chr1.1:42574919-42574938 | MS.gene39233:CDS | 35.0% |
| !! | GCTTTAGAAATGGAATGGAA+TGG | - | chr1.1:42574924-42574943 | MS.gene39233:CDS | 35.0% |
| !! | GGGTATTGATGAAAGTGAAA+GGG | - | chr1.1:42573672-42573691 | MS.gene39233:intron | 35.0% |
| !! | TGTGAAAGGTGCAAAAGTTT+TGG | - | chr1.1:42573814-42573833 | MS.gene39233:intron | 35.0% |
| !! | TTTTATTGGTAACCACTGCT+CGG | + | chr1.1:42578156-42578175 | None:intergenic | 35.0% |
| !!! | AGGTGCAAAAGTTTTGGTTT+TGG | - | chr1.1:42573820-42573839 | MS.gene39233:intron | 35.0% |
| !!! | GAAGTTCTGGGTTTTATCAT+AGG | - | chr1.1:42573864-42573883 | MS.gene39233:intron | 35.0% |
| !!! | GTTGCAAATTTTTTTTGCCC+GGG | + | chr1.1:42574491-42574510 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1.1:42574233-42574252 | MS.gene39233:CDS | 35.0% |
| AAATGAACAGTTGTCGGATC+AGG | + | chr1.1:42575404-42575423 | None:intergenic | 40.0% | |
| AACTGTCCAAAAAGGTAGAG+TGG | + | chr1.1:42575697-42575716 | None:intergenic | 40.0% | |
| AAGAAACAATTAGTCCCTGC+TGG | + | chr1.1:42574892-42574911 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1.1:42574240-42574259 | None:intergenic | 40.0% | |
| ACTTGCTTTCAGAGCATAGA+TGG | - | chr1.1:42578899-42578918 | MS.gene39233:intron | 40.0% | |
| AGAAACAATTAGTCCCTGCT+GGG | + | chr1.1:42574891-42574910 | None:intergenic | 40.0% | |
| AGTTAGAGTTGGGGGTTAAA+AGG | + | chr1.1:42578667-42578686 | None:intergenic | 40.0% | |
| ATTGCAAAGTCCTTGGCAAA+AGG | - | chr1.1:42577386-42577405 | MS.gene39233:intron | 40.0% | |
| CAACTACCTCAAGCACAAAA+TGG | + | chr1.1:42577904-42577923 | None:intergenic | 40.0% | |
| CAACTTCTTCAATGGACGAT+TGG | - | chr1.1:42578117-42578136 | MS.gene39233:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1.1:42574239-42574258 | None:intergenic | 40.0% | |
| CCACCTCTATCCCTAAATAT+AGG | - | chr1.1:42576108-42576127 | MS.gene39233:intron | 40.0% | |
| CCAGTTGAATGCTTGACATT+AGG | - | chr1.1:42575727-42575746 | MS.gene39233:intron | 40.0% | |
| CCTAATGTCAAGCATTCAAC+TGG | + | chr1.1:42575730-42575749 | None:intergenic | 40.0% | |
| CCTATATTTAGGGATAGAGG+TGG | + | chr1.1:42576111-42576130 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1.1:42574208-42574227 | None:intergenic | 40.0% | |
| CTAATAGCATAAACCAGTGG+CGG | - | chr1.1:42574446-42574465 | MS.gene39233:intron | 40.0% | |
| CTAGAACAATTGGACCAGTT+TGG | - | chr1.1:42578004-42578023 | MS.gene39233:intron | 40.0% | |
| CTGAATATACTTCCTGGCTA+TGG | + | chr1.1:42576510-42576529 | None:intergenic | 40.0% | |
| GATTCATCATTAGCTCCTGA+AGG | - | chr1.1:42578071-42578090 | MS.gene39233:intron | 40.0% | |
| GCAAAAGGTCTAGTTGATCA+GGG | - | chr1.1:42577401-42577420 | MS.gene39233:intron | 40.0% | |
| GGAATTCAGAATGTTGCTAC+TGG | - | chr1.1:42576151-42576170 | MS.gene39233:intron | 40.0% | |
| GGGTAGTCAGATACTTTACA+AGG | - | chr1.1:42577421-42577440 | MS.gene39233:intron | 40.0% | |
| GGTCCTATATTTAGGGATAG+AGG | + | chr1.1:42576114-42576133 | None:intergenic | 40.0% | |
| GTTATTGCTGTAGCTTTCTC+AGG | - | chr1.1:42578962-42578981 | MS.gene39233:intron | 40.0% | |
| TCATCCATATAAGTCGACAC+AGG | + | chr1.1:42576060-42576079 | None:intergenic | 40.0% | |
| TGGATCCTGAATATACTTCC+TGG | + | chr1.1:42576516-42576535 | None:intergenic | 40.0% | |
| TGTCATCCCTACATTTCCAA+AGG | + | chr1.1:42577177-42577196 | None:intergenic | 40.0% | |
| TTATACCTGGTGGAAGTTCT+GGG | - | chr1.1:42573852-42573871 | MS.gene39233:intron | 40.0% | |
| TTATGGAAAGTGGGAAGAGA+GGG | - | chr1.1:42573717-42573736 | MS.gene39233:intron | 40.0% | |
| TTTGTGTGCCCGAATTCATA+TGG | - | chr1.1:42576027-42576046 | MS.gene39233:intron | 40.0% | |
| ! | AAGTATCGTCGATGTGTCTT+AGG | + | chr1.1:42578703-42578722 | None:intergenic | 40.0% |
| ! | AAGTCATGGAAGCACACAAA+AGG | + | chr1.1:42578197-42578216 | None:intergenic | 40.0% |
| ! | AGATTGAAACTTTGGAGGTG+GGG | + | chr1.1:42573582-42573601 | None:intergenic | 40.0% |
| ! | ATCAACTAGACCTTTTGCCA+AGG | + | chr1.1:42577399-42577418 | None:intergenic | 40.0% |
| ! | ATTGTTATTGGGTCTGGGAT+TGG | - | chr1.1:42573764-42573783 | MS.gene39233:intron | 40.0% |
| ! | CAAAAGCACGGCAATAATGA+AGG | + | chr1.1:42579234-42579253 | None:intergenic | 40.0% |
| ! | CATAGCCAGGAAGTATATTC+AGG | - | chr1.1:42576508-42576527 | MS.gene39233:CDS | 40.0% |
| ! | CATTTTGTGCTTGAGGTAGT+TGG | - | chr1.1:42577902-42577921 | MS.gene39233:intron | 40.0% |
| ! | GAAGCACCTTTGGAAATGTA+GGG | - | chr1.1:42577168-42577187 | MS.gene39233:intron | 40.0% |
| ! | GACGGCATCCTCAAATTTTA+TGG | - | chr1.1:42575512-42575531 | MS.gene39233:intron | 40.0% |
| ! | GAGAAGTATGTTATACCTGG+TGG | - | chr1.1:42573842-42573861 | MS.gene39233:intron | 40.0% |
| ! | GATGCAATTGTTATTGGGTC+TGG | - | chr1.1:42573758-42573777 | MS.gene39233:intron | 40.0% |
| ! | GCTTGGTTGGTTAAGAACAT+TGG | - | chr1.1:42579459-42579478 | MS.gene39233:CDS | 40.0% |
| ! | GGAAGAGCTGAATTTTCATC+TGG | - | chr1.1:42573620-42573639 | MS.gene39233:intron | 40.0% |
| ! | GGAGAAAAAGTCACCTGTTT+TGG | - | chr1.1:42579417-42579436 | MS.gene39233:CDS | 40.0% |
| ! | GTTGGCTCTTCTGTTATGTT+TGG | - | chr1.1:42573905-42573924 | MS.gene39233:intron | 40.0% |
| ! | TAGTTCTATAGGGGTAACCT+TGG | + | chr1.1:42574320-42574339 | None:intergenic | 40.0% |
| ! | TCACTGTCATTCTAGCTATC+TGG | + | chr1.1:42576953-42576972 | None:intergenic | 40.0% |
| ! | TTGTCACCATTTTGTGCTTG+AGG | - | chr1.1:42577895-42577914 | MS.gene39233:intron | 40.0% |
| !! | AAGAGAGGGGATTTTAGTGA+AGG | - | chr1.1:42573731-42573750 | MS.gene39233:intron | 40.0% |
| !! | ACAACCTGTGTCGACTTATA+TGG | - | chr1.1:42576053-42576072 | MS.gene39233:intron | 40.0% |
| !! | AGAAGCACCTTTGGAAATGT+AGG | - | chr1.1:42577167-42577186 | MS.gene39233:intron | 40.0% |
| !! | AGAGAGGGGATTTTAGTGAA+GGG | - | chr1.1:42573732-42573751 | MS.gene39233:intron | 40.0% |
| !! | GAGGGGTATACTTTTGATGT+TGG | - | chr1.1:42573887-42573906 | MS.gene39233:intron | 40.0% |
| !! | TCTGGGTTTTATCATAGGGA+GGG | - | chr1.1:42573869-42573888 | MS.gene39233:intron | 40.0% |
| !! | TGGCTGCTATGCTTTAGAAA+TGG | - | chr1.1:42574914-42574933 | MS.gene39233:CDS | 40.0% |
| !! | TTCTGGGTTTTATCATAGGG+AGG | - | chr1.1:42573868-42573887 | MS.gene39233:intron | 40.0% |
| AAGCAAAAAGCTAGGTGAGC+AGG | + | chr1.1:42576821-42576840 | None:intergenic | 45.0% | |
| ACAGCAATAACACCTTGTCC+AGG | + | chr1.1:42578953-42578972 | None:intergenic | 45.0% | |
| ACCAGTTTGGAGGAACCATA+TGG | - | chr1.1:42578017-42578036 | MS.gene39233:intron | 45.0% | |
| ACGAGTATTATCACCGAGCA+GGG | - | chr1.1:42577452-42577471 | MS.gene39233:intron | 45.0% | |
| AGAGAGAGCAAGAGAGAAAG+AGG | + | chr1.1:42577275-42577294 | None:intergenic | 45.0% | |
| AGCACGGCAATAATGAAGGA+CGG | + | chr1.1:42579230-42579249 | None:intergenic | 45.0% | |
| AGCATTCCAAAGGGGTTGTT+AGG | - | chr1.1:42578760-42578779 | MS.gene39233:intron | 45.0% | |
| AGGAGAATCACTGCCAAAAG+AGG | - | chr1.1:42577781-42577800 | MS.gene39233:intron | 45.0% | |
| AGGCAAAACGCCTTATAAGG+GGG | + | chr1.1:42575577-42575596 | None:intergenic | 45.0% | |
| AGTGAAAGGGATGGTGAAGT+TGG | - | chr1.1:42573685-42573704 | MS.gene39233:intron | 45.0% | |
| AGTTGGGGGTTAAAAGGTTC+AGG | + | chr1.1:42578661-42578680 | None:intergenic | 45.0% | |
| ATATGAGGCAAAGAAGCAGG+TGG | - | chr1.1:42578331-42578350 | MS.gene39233:intron | 45.0% | |
| ATTATGCTGTGTATCCCAGC+AGG | - | chr1.1:42574874-42574893 | MS.gene39233:CDS | 45.0% | |
| CAGCAATAACACCTTGTCCA+GGG | + | chr1.1:42578952-42578971 | None:intergenic | 45.0% | |
| CATCGAGTAGCTGCAGATAT+TGG | - | chr1.1:42578998-42579017 | MS.gene39233:intron | 45.0% | |
| CATTCTGAATTCCCGTGATC+CGG | + | chr1.1:42576144-42576163 | None:intergenic | 45.0% | |
| CCAGGATTATTGTAAAGCCC+GGG | - | chr1.1:42574471-42574490 | MS.gene39233:intron | 45.0% | |
| CCCAACTCTAACTCTAGGTA+GGG | - | chr1.1:42578674-42578693 | MS.gene39233:intron | 45.0% | |
| CCCTACCTAGAGTTAGAGTT+GGG | + | chr1.1:42578677-42578696 | None:intergenic | 45.0% | |
| CCTACCTAGAGTTAGAGTTG+GGG | + | chr1.1:42578676-42578695 | None:intergenic | 45.0% | |
| CGAATATGAGGCAAAGAAGC+AGG | - | chr1.1:42578328-42578347 | MS.gene39233:intron | 45.0% | |
| CTAACCAAATGTGTCCCATC+TGG | + | chr1.1:42577633-42577652 | None:intergenic | 45.0% | |
| CTACCTAGAGTTAGAGTTGG+GGG | + | chr1.1:42578675-42578694 | None:intergenic | 45.0% | |
| GAACAATTGGACCAGTTTGG+AGG | - | chr1.1:42578007-42578026 | MS.gene39233:intron | 45.0% | |
| GAGGCAAAACGCCTTATAAG+GGG | + | chr1.1:42575578-42575597 | None:intergenic | 45.0% | |
| GCAATAATGAAGGACGGTAC+AGG | + | chr1.1:42579224-42579243 | None:intergenic | 45.0% | |
| GCCAGGATTATTGTAAAGCC+CGG | - | chr1.1:42574470-42574489 | MS.gene39233:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1.1:42574209-42574228 | None:intergenic | 45.0% | |
| GCTCTTCCAAAGCTACATGA+AGG | + | chr1.1:42573608-42573627 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1.1:42574212-42574231 | None:intergenic | 45.0% | |
| GGAGGCAAAACGCCTTATAA+GGG | + | chr1.1:42575579-42575598 | None:intergenic | 45.0% | |
| GGCAAAAGGTCTAGTTGATC+AGG | - | chr1.1:42577400-42577419 | MS.gene39233:intron | 45.0% | |
| GTGGGATTAACTACCCTCTT+GGG | - | chr1.1:42577351-42577370 | MS.gene39233:intron | 45.0% | |
| GTTATACCTGGTGGAAGTTC+TGG | - | chr1.1:42573851-42573870 | MS.gene39233:intron | 45.0% | |
| GTTATGGAAAGTGGGAAGAG+AGG | - | chr1.1:42573716-42573735 | MS.gene39233:intron | 45.0% | |
| GTTCTGTGTGACAGACACTT+TGG | - | chr1.1:42577329-42577348 | MS.gene39233:CDS | 45.0% | |
| GTTGGAGCTAAAATCGCTTG+AGG | - | chr1.1:42575669-42575688 | MS.gene39233:intron | 45.0% | |
| GTTGGGGGTTAAAAGGTTCA+GGG | + | chr1.1:42578660-42578679 | None:intergenic | 45.0% | |
| GTTGTCTTTCATAGATGCCG+AGG | - | chr1.1:42576541-42576560 | MS.gene39233:intron | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | + | chr1.1:42574284-42574303 | None:intergenic | 45.0% | |
| TAAAACCCAGAACTTCCACC+AGG | + | chr1.1:42573860-42573879 | None:intergenic | 45.0% | |
| TAACCCCCAACTCTAACTCT+AGG | - | chr1.1:42578669-42578688 | MS.gene39233:intron | 45.0% | |
| TATGGAAAGTGGGAAGAGAG+GGG | - | chr1.1:42573718-42573737 | MS.gene39233:intron | 45.0% | |
| TCATCTGGGTCACACTCAAA+TGG | - | chr1.1:42573635-42573654 | MS.gene39233:intron | 45.0% | |
| TCATGACCATGAGTTGCCTT+AGG | - | chr1.1:42575154-42575173 | MS.gene39233:CDS | 45.0% | |
| TCCATATGGTTCCTCCAAAC+TGG | + | chr1.1:42578021-42578040 | None:intergenic | 45.0% | |
| TCCCTACCTAGAGTTAGAGT+TGG | + | chr1.1:42578678-42578697 | None:intergenic | 45.0% | |
| TGAAGGATATGACGACCTTC+AGG | + | chr1.1:42578089-42578108 | None:intergenic | 45.0% | |
| TGCAAAGAAGATATGCCAGG+TGG | + | chr1.1:42575844-42575863 | None:intergenic | 45.0% | |
| TGCTTCACTTCAGCAGCTAA+TGG | + | chr1.1:42575989-42576008 | None:intergenic | 45.0% | |
| TGGGATTAACTACCCTCTTG+GGG | - | chr1.1:42577352-42577371 | MS.gene39233:intron | 45.0% | |
| TGGTGACAATCTGTATCTGG+TGG | + | chr1.1:42577884-42577903 | None:intergenic | 45.0% | |
| TGTGTGACAGACACTTTGGT+GGG | - | chr1.1:42577333-42577352 | MS.gene39233:CDS | 45.0% | |
| TTATGCTGTGTATCCCAGCA+GGG | - | chr1.1:42574875-42574894 | MS.gene39233:CDS | 45.0% | |
| TTCATTGATAGGGACTAGGG+AGG | - | chr1.1:42575866-42575885 | MS.gene39233:intron | 45.0% | |
| TTCTTCAATGGACGATTGGC+AGG | - | chr1.1:42578121-42578140 | MS.gene39233:intron | 45.0% | |
| ! | TACTTTTGCAGGTAGGAGTG+AGG | - | chr1.1:42577558-42577577 | MS.gene39233:CDS | 45.0% |
| ! | TCGATGGATGATCTAAGACC+TGG | + | chr1.1:42578398-42578417 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1.1:42574244-42574263 | MS.gene39233:CDS | 45.0% |
| ! | TTATTGGGTCTGGGATTGGT+GGG | - | chr1.1:42573768-42573787 | MS.gene39233:intron | 45.0% |
| !! | ACACAAGCATTGGAAGCAGT+TGG | - | chr1.1:42575359-42575378 | MS.gene39233:intron | 45.0% |
| !! | AGATGATGCAGAAGCACCTT+TGG | - | chr1.1:42577158-42577177 | MS.gene39233:intron | 45.0% |
| !! | CGCCACTGGTTTATGCTATT+AGG | + | chr1.1:42574448-42574467 | None:intergenic | 45.0% |
| !! | CTGGGTTTTATCATAGGGAG+GGG | - | chr1.1:42573870-42573889 | MS.gene39233:intron | 45.0% |
| !!! | AGGGAGGCGTTATCTTTTAG+CGG | - | chr1.1:42575882-42575901 | MS.gene39233:intron | 45.0% |
| !!! | ACTTTTTATTATTAAAAAAT+AGG | - | chr1.1:42579391-42579410 | MS.gene39233:CDS | 5.0% |
| !!! | CTTTTTATTATTAAAAAATA+GGG | - | chr1.1:42579392-42579411 | MS.gene39233:CDS | 5.0% |
| AAAATGCTGGAGCCATAGCC+AGG | - | chr1.1:42576495-42576514 | MS.gene39233:CDS | 50.0% | |
| AATGCCACGCAGCATTCCAA+AGG | - | chr1.1:42578750-42578769 | MS.gene39233:intron | 50.0% | |
| ACACATGGGGGTTAAAGCAG+AGG | - | chr1.1:42577853-42577872 | MS.gene39233:intron | 50.0% | |
| ACTCGAACAGAGAGGTGGTT+TGG | + | chr1.1:42575434-42575453 | None:intergenic | 50.0% | |
| AGCAGTTGGTTGTCAGATGG+AGG | - | chr1.1:42575373-42575392 | MS.gene39233:CDS | 50.0% | |
| AGTGTCTGTCACACAGAACC+TGG | + | chr1.1:42577328-42577347 | None:intergenic | 50.0% | |
| ATGCCACGCAGCATTCCAAA+GGG | - | chr1.1:42578751-42578770 | MS.gene39233:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr1.1:42574300-42574319 | MS.gene39233:intron | 50.0% | |
| CACGAGTATTATCACCGAGC+AGG | - | chr1.1:42577451-42577470 | MS.gene39233:intron | 50.0% | |
| CCCCAACTCTAACTCTAGGT+AGG | - | chr1.1:42578673-42578692 | MS.gene39233:intron | 50.0% | |
| CCCGGGCTTTACAATAATCC+TGG | + | chr1.1:42574474-42574493 | None:intergenic | 50.0% | |
| CGGAGGCAAAACGCCTTATA+AGG | + | chr1.1:42575580-42575599 | None:intergenic | 50.0% | |
| CTGTGTGACAGACACTTTGG+TGG | - | chr1.1:42577332-42577351 | MS.gene39233:CDS | 50.0% | |
| GAAAGGGATGGTGAAGTTGG+AGG | - | chr1.1:42573688-42573707 | MS.gene39233:intron | 50.0% | |
| GACCAAATTGACCGGATCAC+GGG | - | chr1.1:42576130-42576149 | MS.gene39233:intron | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | - | chr1.1:42574266-42574285 | MS.gene39233:CDS | 50.0% | |
| GCTACCAGATGGGACACATT+TGG | - | chr1.1:42577626-42577645 | MS.gene39233:CDS | 50.0% | |
| GGAAGCAGTTGGTTGTCAGA+TGG | - | chr1.1:42575370-42575389 | MS.gene39233:CDS | 50.0% | |
| GGACCAAATTGACCGGATCA+CGG | - | chr1.1:42576129-42576148 | MS.gene39233:intron | 50.0% | |
| GGCATTCCTAACAACCCCTT+TGG | + | chr1.1:42578769-42578788 | None:intergenic | 50.0% | |
| GGGATTAACTACCCTCTTGG+GGG | - | chr1.1:42577353-42577372 | MS.gene39233:intron | 50.0% | |
| GGGGTGTGATGGTAGATGAT+GGG | + | chr1.1:42573563-42573582 | None:intergenic | 50.0% | |
| GGGTGTGATGGTAGATGATG+GGG | + | chr1.1:42573562-42573581 | None:intergenic | 50.0% | |
| GGTGGGATTAACTACCCTCT+TGG | - | chr1.1:42577350-42577369 | MS.gene39233:intron | 50.0% | |
| GTAGGAGTGAGGCTTTCAGA+TGG | - | chr1.1:42577569-42577588 | MS.gene39233:CDS | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | + | chr1.1:42574278-42574297 | None:intergenic | 50.0% | |
| GTCCATAAGTACCCTCGTCA+CGG | + | chr1.1:42578729-42578748 | None:intergenic | 50.0% | |
| TCAATGGACGATTGGCAGGT+AGG | - | chr1.1:42578125-42578144 | MS.gene39233:intron | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | + | chr1.1:42574277-42574296 | None:intergenic | 50.0% | |
| TCCATAAGTACCCTCGTCAC+GGG | + | chr1.1:42578728-42578747 | None:intergenic | 50.0% | |
| TCTGGGTCACACTCAAATGG+TGG | - | chr1.1:42573638-42573657 | MS.gene39233:intron | 50.0% | |
| TGGGGTGTGATGGTAGATGA+TGG | + | chr1.1:42573564-42573583 | None:intergenic | 50.0% | |
| TGGTGGGATTGCAAAGTCCT+TGG | - | chr1.1:42577379-42577398 | MS.gene39233:intron | 50.0% | |
| TTCCCGTGATCCGGTCAATT+TGG | + | chr1.1:42576135-42576154 | None:intergenic | 50.0% | |
| ! | AAAAATTTTGGGCCGGAGCC+CGG | - | chr1.1:42574627-42574646 | MS.gene39233:CDS | 50.0% |
| ! | AGGATGCCGTCCTTTTCATG+GGG | + | chr1.1:42575503-42575522 | None:intergenic | 50.0% |
| ! | GAGGAGCCACTCTACCTTTT+TGG | - | chr1.1:42575688-42575707 | MS.gene39233:intron | 50.0% |
| ! | GAGGATGCCGTCCTTTTCAT+GGG | + | chr1.1:42575504-42575523 | None:intergenic | 50.0% |
| ! | GCTATGGCTCCAGCATTTTG+AGG | + | chr1.1:42576494-42576513 | None:intergenic | 50.0% |
| ! | GGCGTTATCTTTTAGCGGTG+AGG | - | chr1.1:42575887-42575906 | MS.gene39233:intron | 50.0% |
| ! | GGTGTGATGGTAGATGATGG+GGG | + | chr1.1:42573561-42573580 | None:intergenic | 50.0% |
| ! | GTTATTGGGTCTGGGATTGG+TGG | - | chr1.1:42573767-42573786 | MS.gene39233:intron | 50.0% |
| ! | TGAGGATGCCGTCCTTTTCA+TGG | + | chr1.1:42575505-42575524 | None:intergenic | 50.0% |
| ! | TTTGGAATGCTGCGTGGCAT+TGG | + | chr1.1:42578751-42578770 | None:intergenic | 50.0% |
| !! | TGGAGTCTGCAAAGCGTTGA+CGG | + | chr1.1:42576776-42576795 | None:intergenic | 50.0% |
| !! | TTTTGGACGGCATGCTGCTT+GGG | - | chr1.1:42579434-42579453 | MS.gene39233:CDS | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1.1:42574265-42574284 | None:intergenic | 55.0% | |
| AATAATCCTGGCTCCGCCAC+TGG | + | chr1.1:42574462-42574481 | None:intergenic | 55.0% | |
| ACGATACTTAGCCCGTGACG+AGG | - | chr1.1:42578714-42578733 | MS.gene39233:intron | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr1.1:42574168-42574187 | MS.gene39233:intron | 55.0% | |
| ACTTACGGCTTTGCCCTGCT+CGG | + | chr1.1:42577468-42577487 | None:intergenic | 55.0% | |
| AGCAGCATGCCGTCCAAAAC+AGG | + | chr1.1:42579433-42579452 | None:intergenic | 55.0% | |
| AGGTAGGCAATACCGAGCAG+TGG | - | chr1.1:42578141-42578160 | MS.gene39233:intron | 55.0% | |
| AGGTGTGCCTGTGTGTGTAG+AGG | + | chr1.1:42576385-42576404 | None:intergenic | 55.0% | |
| AGTGTTTATGCCAGCGACCC+CGG | + | chr1.1:42574661-42574680 | None:intergenic | 55.0% | |
| CGATACTTAGCCCGTGACGA+GGG | - | chr1.1:42578715-42578734 | MS.gene39233:intron | 55.0% | |
| CTCTGTGCACTCGAACAGAG+AGG | + | chr1.1:42575442-42575461 | None:intergenic | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr1.1:42574169-42574188 | MS.gene39233:intron | 55.0% | |
| GACAGTTGCTTCCCTGGACA+AGG | - | chr1.1:42578938-42578957 | MS.gene39233:intron | 55.0% | |
| GGGACTCAGTTGGCTGTGAA+AGG | - | chr1.1:42573800-42573819 | MS.gene39233:intron | 55.0% | |
| GGTGTGCCTGTGTGTGTAGA+GGG | + | chr1.1:42576384-42576403 | None:intergenic | 55.0% | |
| GTGACTGCAGCCCCCTTATA+AGG | - | chr1.1:42575564-42575583 | MS.gene39233:CDS | 55.0% | |
| GTTGGAGACAGTTGCTTCCC+TGG | - | chr1.1:42578932-42578951 | MS.gene39233:intron | 55.0% | |
| GTTGGTTGCTGGGACTCAGT+TGG | - | chr1.1:42573790-42573809 | MS.gene39233:intron | 55.0% | |
| TGACGACCCTCTACACACAC+AGG | - | chr1.1:42576375-42576394 | MS.gene39233:intron | 55.0% | |
| TGCCACGCAGCATTCCAAAG+GGG | - | chr1.1:42578752-42578771 | MS.gene39233:intron | 55.0% | |
| TGTGCACTCGAACAGAGAGG+TGG | + | chr1.1:42575439-42575458 | None:intergenic | 55.0% | |
| ! | AAAATTTTGGGCCGGAGCCC+GGG | - | chr1.1:42574628-42574647 | MS.gene39233:CDS | 55.0% |
| ! | AACTACCCTCTTGGGGGTGT+TGG | - | chr1.1:42577359-42577378 | MS.gene39233:intron | 55.0% |
| ! | ACTTTGGAGGTGGGGTGTGA+TGG | + | chr1.1:42573574-42573593 | None:intergenic | 55.0% |
| ! | TGCTGCTTGGGTTGCTTGGT+TGG | - | chr1.1:42579446-42579465 | MS.gene39233:CDS | 55.0% |
| !! | AACCCCTTTGGAATGCTGCG+TGG | + | chr1.1:42578757-42578776 | None:intergenic | 55.0% |
| !! | GATGGTAGATGATGGGGGTG+TGG | + | chr1.1:42573556-42573575 | None:intergenic | 55.0% |
| !! | GGATTGGTGGGTTGGTTGCT+GGG | - | chr1.1:42573780-42573799 | MS.gene39233:intron | 55.0% |
| !! | GTTTTGGACGGCATGCTGCT+TGG | - | chr1.1:42579433-42579452 | MS.gene39233:CDS | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1.1:42574311-42574330 | None:intergenic | 60.0% | |
| ATCCCACCAACACCCCCAAG+AGG | + | chr1.1:42577368-42577387 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr1.1:42574164-42574183 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr1.1:42574181-42574200 | MS.gene39233:intron | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr1.1:42574181-42574200 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr1.1:42574180-42574199 | MS.gene39233:intron | 60.0% | |
| GTGTTTATGCCAGCGACCCC+GGG | + | chr1.1:42574660-42574679 | None:intergenic | 60.0% | |
| TCCCACCAACACCCCCAAGA+GGG | + | chr1.1:42577367-42577386 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr1.1:42574180-42574199 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1.1:42574196-42574215 | None:intergenic | 60.0% |
| ! | CATAAACCAGTGGCGGAGCC+AGG | - | chr1.1:42574453-42574472 | MS.gene39233:intron | 60.0% |
| ! | GGCATGCTGCTTGGGTTGCT+TGG | - | chr1.1:42579442-42579461 | MS.gene39233:CDS | 60.0% |
| ! | TGGGTCTGGGATTGGTGGGT+TGG | - | chr1.1:42573772-42573791 | MS.gene39233:intron | 60.0% |
| !! | ACCCTCTTGGGGGTGTTGGT+GGG | - | chr1.1:42577363-42577382 | MS.gene39233:intron | 60.0% |
| !! | GCCCGTGACGAGGGTACTTA+TGG | - | chr1.1:42578724-42578743 | MS.gene39233:intron | 60.0% |
| !! | GGGATTGGTGGGTTGGTTGC+TGG | - | chr1.1:42573779-42573798 | MS.gene39233:intron | 60.0% |
| !! | TACCCTCTTGGGGGTGTTGG+TGG | - | chr1.1:42577362-42577381 | MS.gene39233:intron | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr1.1:42574179-42574198 | MS.gene39233:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1.1:42574194-42574213 | MS.gene39233:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr1.1:42574175-42574194 | MS.gene39233:intron | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr1.1:42574174-42574193 | MS.gene39233:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr1.1:42574163-42574182 | None:intergenic | 65.0% | |
| ! | AGCGACCCCGGGCACTCGCC+CGG | + | chr1.1:42574649-42574668 | None:intergenic | 80.0% |
| ! | CCGGAGCCCGGGCGAGTGCC+CGG | - | chr1.1:42574639-42574658 | MS.gene39233:CDS | 85.0% |
| ! | CCGGGCACTCGCCCGGGCTC+CGG | + | chr1.1:42574642-42574661 | None:intergenic | 85.0% |
| ! | CGGAGCCCGGGCGAGTGCCC+GGG | - | chr1.1:42574640-42574659 | MS.gene39233:CDS | 85.0% |
| ! | GCGACCCCGGGCACTCGCCC+GGG | + | chr1.1:42574648-42574667 | None:intergenic | 85.0% |
| ! | GGAGCCCGGGCGAGTGCCCG+GGG | - | chr1.1:42574641-42574660 | MS.gene39233:CDS | 85.0% |
| ! | GGGCGAGTGCCCGGGGTCGC+TGG | - | chr1.1:42574648-42574667 | MS.gene39233:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 42573521 | 42579486 | 42573521 | ID=MS.gene39233 |
| chr1.1 | mRNA | 42573521 | 42579486 | 42573521 | ID=MS.gene39233.t1;Parent=MS.gene39233 |
| chr1.1 | exon | 42579067 | 42579486 | 42579067 | ID=MS.gene39233.t1.exon1;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42579067 | 42579486 | 42579067 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42577460 | 42577666 | 42577460 | ID=MS.gene39233.t1.exon2;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42577460 | 42577666 | 42577460 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42577259 | 42577358 | 42577259 | ID=MS.gene39233.t1.exon3;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42577259 | 42577358 | 42577259 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42576445 | 42576527 | 42576445 | ID=MS.gene39233.t1.exon4;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42576445 | 42576527 | 42576445 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42576194 | 42576250 | 42576194 | ID=MS.gene39233.t1.exon5;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42576194 | 42576250 | 42576194 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42575526 | 42575678 | 42575526 | ID=MS.gene39233.t1.exon6;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42575526 | 42575678 | 42575526 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42575360 | 42575438 | 42575360 | ID=MS.gene39233.t1.exon7;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42575360 | 42575438 | 42575360 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42575091 | 42575239 | 42575091 | ID=MS.gene39233.t1.exon8;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42575091 | 42575239 | 42575091 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42574865 | 42574999 | 42574865 | ID=MS.gene39233.t1.exon9;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42574865 | 42574999 | 42574865 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42574580 | 42574693 | 42574580 | ID=MS.gene39233.t1.exon10;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42574580 | 42574693 | 42574580 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42574206 | 42574316 | 42574206 | ID=MS.gene39233.t1.exon11;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42574206 | 42574316 | 42574206 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42573988 | 42574096 | 42573988 | ID=MS.gene39233.t1.exon12;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42573988 | 42574096 | 42573988 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| chr1.1 | exon | 42573521 | 42573594 | 42573521 | ID=MS.gene39233.t1.exon13;Parent=MS.gene39233.t1 |
| chr1.1 | CDS | 42573521 | 42573594 | 42573521 | ID=cds.MS.gene39233.t1;Parent=MS.gene39233.t1 |
| Gene Sequence |
| Protein sequence |
