Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40351.t1 | XP_003603582.1 | 98.6 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 1.20E-97 | 367.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40351.t1 | G7J2W4 | 98.6 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 8.3e-98 | 367.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29768 | MS.gene40351 | PPI |
| MS.gene40351 | MS.gene06367 | PPI |
| MS.gene40351 | MS.gene81660 | PPI |
| MS.gene40351 | MS.gene98540 | PPI |
| MS.gene90626 | MS.gene40351 | PPI |
| MS.gene40351 | MS.gene40923 | PPI |
| MS.gene40351 | MS.gene049260 | PPI |
| MS.gene40351 | MS.gene013282 | PPI |
| MS.gene81658 | MS.gene40351 | PPI |
| MS.gene40351 | MS.gene81663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40351.t1 | MTR_3g109330 | 98.861 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 0.0 | 871 |
| MS.gene40351.t1 | MTR_3g109330 | 94.761 | 439 | 5 | 1 | 1 | 439 | 1 | 421 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40351.t1 | AT4G31340 | 58.924 | 409 | 162 | 4 | 31 | 439 | 35 | 437 | 3.53e-166 | 474 |
| MS.gene40351.t1 | AT2G24420 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 4.39e-161 | 462 |
| MS.gene40351.t1 | AT2G24420 | 54.779 | 429 | 183 | 5 | 17 | 439 | 17 | 440 | 4.39e-161 | 462 |
| MS.gene40351.t1 | AT4G31340 | 58.961 | 385 | 154 | 2 | 31 | 415 | 35 | 415 | 2.47e-156 | 449 |
| MS.gene40351.t1 | AT4G30090 | 30.617 | 405 | 212 | 7 | 40 | 437 | 44 | 386 | 2.31e-52 | 181 |
Find 99 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATTGAGTTGATCTAAT+TGG | 0.198323 | 3.3:-89505717 | None:intergenic |
| AAGAAGGTTGTTCTCGCTTA+TGG | 0.201487 | 3.3:+89508810 | MS.gene40351:CDS |
| AAGTAACGAAGGAGAAAATT+AGG | 0.226102 | 3.3:-89505645 | None:intergenic |
| AAAAGGCACAAGCTGGAAAA+TGG | 0.236033 | 3.3:+89508189 | MS.gene40351:CDS |
| ACTCTAGCTATTAAGATAAT+AGG | 0.265678 | 3.3:-89509752 | None:intergenic |
| TATGCAGGCCTCTGCCCTTC+TGG | 0.268328 | 3.3:+89509724 | MS.gene40351:intron |
| GAAACTTATACCTGATAATA+AGG | 0.301355 | 3.3:-89508628 | None:intergenic |
| AACACAAGAATTGAAGAAAA+AGG | 0.318070 | 3.3:+89506040 | MS.gene40351:CDS |
| TTGGATTGATACCGAGGAAT+TGG | 0.318579 | 3.3:-89505744 | None:intergenic |
| GAATGAGGTTGCTTCTCTTC+AGG | 0.323946 | 3.3:+89506127 | MS.gene40351:CDS |
| ATTCTAGGCCCTAGAGAAAA+AGG | 0.331966 | 3.3:+89508172 | MS.gene40351:intron |
| ACCTCTTGCTACTAAAGAAT+TGG | 0.345133 | 3.3:+89509601 | MS.gene40351:CDS |
| GAATGCTACTCAACTTATCT+TGG | 0.345760 | 3.3:-89506094 | None:intergenic |
| ATCTAAGACTAACCAGAAAA+TGG | 0.347393 | 3.3:-89509783 | None:intergenic |
| TCTCGCTTATGGGAATTTCT+TGG | 0.348918 | 3.3:+89508821 | MS.gene40351:CDS |
| CTTCATGTTATCTACTTGTC+TGG | 0.380045 | 3.3:-89510013 | None:intergenic |
| ATGGTGCTTGGCTTCCTCCT+TGG | 0.385003 | 3.3:+89507833 | MS.gene40351:CDS |
| TATCATCTGCAGCAGCAAAA+AGG | 0.397213 | 3.3:+89509928 | MS.gene40351:intron |
| AGAAGGTTGTTCTCGCTTAT+GGG | 0.403445 | 3.3:+89508811 | MS.gene40351:CDS |
| ATGTGTAGATCCTTATTATC+AGG | 0.406758 | 3.3:+89508618 | MS.gene40351:CDS |
| GATACCGAGGAATTGGATCT+TGG | 0.433047 | 3.3:-89505737 | None:intergenic |
| GTCATTGGATGCCGAGGAGC+AGG | 0.448017 | 3.3:+89506322 | MS.gene40351:CDS |
| GGGAGCAAGTGCGTCCTTTG+AGG | 0.460893 | 3.3:-89508575 | None:intergenic |
| AGAAAGTGAACTGGGAATCT+CGG | 0.463402 | 3.3:+89506504 | MS.gene40351:CDS |
| AAAGGCACAAGCTGGAAAAT+GGG | 0.463620 | 3.3:+89508190 | MS.gene40351:CDS |
| GACCACTGTTCTTTCACAGC+TGG | 0.466702 | 3.3:-89508484 | None:intergenic |
| GTTGGAAGTGATATCTCAAA+AGG | 0.468095 | 3.3:+89508008 | MS.gene40351:CDS |
| TAAAGAATTGGAATGGTTTG+CGG | 0.470283 | 3.3:+89509613 | MS.gene40351:CDS |
| CAGTGCTTGCACATGAGGTT+CGG | 0.473641 | 3.3:-89508524 | None:intergenic |
| TAGCAAGCCATACATTGATC+AGG | 0.474392 | 3.3:+89508728 | MS.gene40351:CDS |
| AGTAACGAAGGAGAAAATTA+GGG | 0.474409 | 3.3:-89505644 | None:intergenic |
| AGTCCGTGGCTGAGAGTCAT+TGG | 0.476512 | 3.3:+89507965 | MS.gene40351:intron |
| AAAACAGTGAGAAAGTGAAC+TGG | 0.480727 | 3.3:+89506495 | MS.gene40351:CDS |
| AGAACAACCTTCTTTGTGTA+GGG | 0.494541 | 3.3:-89508801 | None:intergenic |
| GAAGTCAGTGCTTGCACATG+AGG | 0.495088 | 3.3:-89508529 | None:intergenic |
| TGTACACTATATTCGTAGTA+AGG | 0.505415 | 3.3:+89507861 | MS.gene40351:CDS |
| GAAAGTGAACTGGGAATCTC+GGG | 0.506911 | 3.3:+89506505 | MS.gene40351:CDS |
| CATTCAATCCTTGCAGAATG+AGG | 0.508270 | 3.3:+89506112 | MS.gene40351:CDS |
| ATGATCAGACTCATGGTGCT+TGG | 0.513875 | 3.3:+89507821 | MS.gene40351:intron |
| ACGTCTCTTGGACAGTAGCT+TGG | 0.519002 | 3.3:-89509556 | None:intergenic |
| TTGCTACTAAAGAATTGGAA+TGG | 0.520379 | 3.3:+89509606 | MS.gene40351:CDS |
| TATTTAGGAAGAAATGTTGA+AGG | 0.522472 | 3.3:+89507428 | MS.gene40351:intron |
| AGATAATAGGCAAGGCCAGA+AGG | 0.525870 | 3.3:-89509739 | None:intergenic |
| TCCAATTCTTTAGTAGCAAG+AGG | 0.528573 | 3.3:-89509602 | None:intergenic |
| TGCCACTGCATATCATCGCC+AGG | 0.528771 | 3.3:+89508848 | MS.gene40351:CDS |
| GTAGCGACCTGATCAATGTA+TGG | 0.537102 | 3.3:-89508735 | None:intergenic |
| AGCTTTACGACGAGTGTGGT+GGG | 0.538967 | 3.3:-89509978 | None:intergenic |
| TGCCGGTGAACTACAGAAGC+AGG | 0.548974 | 3.3:+89506364 | MS.gene40351:CDS |
| AGGCAAGGCCAGAAGGGCAG+AGG | 0.549576 | 3.3:-89509732 | None:intergenic |
| TGAACATGGGAAGCCTCTGT+TGG | 0.550076 | 3.3:+89507990 | MS.gene40351:CDS |
| GGAAAGGCTCATGCACGTGC+CGG | 0.552710 | 3.3:+89506347 | MS.gene40351:CDS |
| GAGAGTCATTGGAATGAACA+TGG | 0.556843 | 3.3:+89507976 | MS.gene40351:CDS |
| TTTCTCCTTCGTTACTTCCG+AGG | 0.559854 | 3.3:+89505651 | MS.gene40351:CDS |
| TGCCGAGGAGCAGGTTGGAA+AGG | 0.563199 | 3.3:+89506331 | MS.gene40351:CDS |
| ACAGGTTCAAAAGATAAATG+AGG | 0.567365 | 3.3:+89507261 | MS.gene40351:intron |
| TAGCTTTACGACGAGTGTGG+TGG | 0.567556 | 3.3:-89509979 | None:intergenic |
| GAGAACAACCTTCTTTGTGT+AGG | 0.572587 | 3.3:-89508802 | None:intergenic |
| GATAATAGGCAAGGCCAGAA+GGG | 0.576847 | 3.3:-89509738 | None:intergenic |
| ATAGCGAAGACGAAAAGCTT+CGG | 0.580873 | 3.3:-89505613 | None:intergenic |
| GACCTGCTTCTGTAGTTCAC+CGG | 0.583896 | 3.3:-89506366 | None:intergenic |
| TGGGTGTTTCCACTTCGAGC+GGG | 0.584384 | 3.3:-89509959 | None:intergenic |
| GCTTAGCTTTACGACGAGTG+TGG | 0.588964 | 3.3:-89509982 | None:intergenic |
| AATTCCAAGATCCAATTCCT+CGG | 0.589768 | 3.3:+89505733 | MS.gene40351:CDS |
| AAAATGGGCTGAACCTCACG+TGG | 0.592865 | 3.3:+89508205 | MS.gene40351:CDS |
| ACTTGCTCCCCACTTGAACA+AGG | 0.596960 | 3.3:+89508588 | MS.gene40351:CDS |
| AGCCTTTCCAACCTGCTCCT+CGG | 0.598082 | 3.3:-89506333 | None:intergenic |
| TGAGATATCACTTCCAACAG+AGG | 0.601782 | 3.3:-89508003 | None:intergenic |
| AGCTATTAAGATAATAGGCA+AGG | 0.602545 | 3.3:-89509747 | None:intergenic |
| TCTGAAGCCCTACACAAAGA+AGG | 0.603321 | 3.3:+89508794 | MS.gene40351:CDS |
| ACTTGTATATTCTCAACATG+AGG | 0.604598 | 3.3:-89508768 | None:intergenic |
| GCAAGTAAACCCGCTCGAAG+TGG | 0.604975 | 3.3:+89509950 | MS.gene40351:CDS |
| TGAAGTTTACAAGTCCTCAA+AGG | 0.607940 | 3.3:+89508561 | MS.gene40351:CDS |
| GAAGGAGAAAATTAGGGCAA+CGG | 0.609746 | 3.3:-89505638 | None:intergenic |
| TTGGATGCCGAGGAGCAGGT+TGG | 0.613773 | 3.3:+89506326 | MS.gene40351:CDS |
| AGAGGAATCAGAATCTTCGA+TGG | 0.619773 | 3.3:-89505683 | None:intergenic |
| AAAAGGGTCATTGGATGCCG+AGG | 0.621224 | 3.3:+89506316 | MS.gene40351:CDS |
| TGATTTGAACTCAAAACTAG+AGG | 0.624974 | 3.3:+89506553 | MS.gene40351:CDS |
| AAACAGTGAGAAAGTGAACT+GGG | 0.625922 | 3.3:+89506496 | MS.gene40351:CDS |
| AATGTTGAAGGCAAAGCTAG+AGG | 0.629492 | 3.3:+89507440 | MS.gene40351:CDS |
| GTGGGTGTTTCCACTTCGAG+CGG | 0.630465 | 3.3:-89509960 | None:intergenic |
| TTCGATGGAAACATCGACCT+CGG | 0.634140 | 3.3:-89505668 | None:intergenic |
| CATTGATCAGGTCGCTACTG+CGG | 0.635282 | 3.3:+89508740 | MS.gene40351:CDS |
| TAATTGGATCTTAAGAGCAG+AGG | 0.640351 | 3.3:-89505701 | None:intergenic |
| AGAAGCAACCTCATTCTGCA+AGG | 0.645724 | 3.3:-89506120 | None:intergenic |
| TCATGTTGAGAATATACAAG+TGG | 0.650587 | 3.3:+89508770 | MS.gene40351:CDS |
| ATCGACCTCGGAAGTAACGA+AGG | 0.651869 | 3.3:-89505656 | None:intergenic |
| ACGTGCTCTTAAAGTTGCCG+AGG | 0.655385 | 3.3:+89507312 | MS.gene40351:CDS |
| ATTCCAATGACTCTCAGCCA+CGG | 0.657274 | 3.3:-89507968 | None:intergenic |
| ATATAGTGTACAGCAAGCCA+AGG | 0.657714 | 3.3:-89507850 | None:intergenic |
| GGTGTTAATGATCAGACTCA+TGG | 0.658662 | 3.3:+89507814 | MS.gene40351:intron |
| TAGTGTACAGCAAGCCAAGG+AGG | 0.659126 | 3.3:-89507847 | None:intergenic |
| GCGAAGACGAAAAGCTTCGG+AGG | 0.668584 | 3.3:-89505610 | None:intergenic |
| AGAGTCATTGGAATGAACAT+GGG | 0.671207 | 3.3:+89507977 | MS.gene40351:CDS |
| GTGGTCTGTGGTGAAAACAA+AGG | 0.688492 | 3.3:+89508501 | MS.gene40351:CDS |
| CAAAGCAAAAGAGCTGAGCG+AGG | 0.693194 | 3.3:+89507470 | MS.gene40351:CDS |
| TGTGAAAGAACAGTGGTCTG+TGG | 0.702105 | 3.3:+89508489 | MS.gene40351:CDS |
| TTCCAGCTGTGAAAGAACAG+TGG | 0.708355 | 3.3:+89508482 | MS.gene40351:CDS |
| ACTCGTCGTAAAGCTAAGCG+AGG | 0.711196 | 3.3:+89509986 | MS.gene40351:CDS |
| AACCTGGCGATGATATGCAG+TGG | 0.744590 | 3.3:-89508850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAATAATAATTTTGAA+GGG | - | chr3.3:89506289-89506308 | None:intergenic | 10.0% |
| !! | ACTAAAATATAAATATGGTT+AGG | + | chr3.3:89509673-89509692 | MS.gene40351:intron | 15.0% |
| !! | ATTCAAAAAAATAATACAAG+AGG | - | chr3.3:89508915-89508934 | None:intergenic | 15.0% |
| !!! | ATATAAGGAATTTTTTTACT+AGG | - | chr3.3:89507691-89507710 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTCATTAAG+TGG | - | chr3.3:89507127-89507146 | None:intergenic | 15.0% |
| !!! | GGAAAAAATAATAATTTTGA+AGG | - | chr3.3:89506290-89506309 | None:intergenic | 15.0% |
| !!! | GTACTATATGATATTTATTT+TGG | + | chr3.3:89508030-89508049 | MS.gene40351:intron | 15.0% |
| !!! | TATCAAAACATAATTTTGTT+AGG | + | chr3.3:89507210-89507229 | MS.gene40351:intron | 15.0% |
| !!! | TCTTGTATTATTTTTTTGAA+TGG | + | chr3.3:89508914-89508933 | MS.gene40351:intron | 15.0% |
| !!! | TTATTTTATAGTAAACTATC+AGG | - | chr3.3:89507741-89507760 | None:intergenic | 15.0% |
| !!! | TTCTATTGATATTCTTATTT+AGG | + | chr3.3:89507413-89507432 | MS.gene40351:intron | 15.0% |
| !! | AAAATATAAATATGGTTAGG+TGG | + | chr3.3:89509676-89509695 | MS.gene40351:intron | 20.0% |
| !! | AAATGCTTCAAAAATAATAC+AGG | - | chr3.3:89506211-89506230 | None:intergenic | 20.0% |
| !! | AAGAAGTTCATAAAAAAACT+TGG | - | chr3.3:89505854-89505873 | None:intergenic | 20.0% |
| !! | AATAAACTGACATTATTAGA+TGG | - | chr3.3:89507191-89507210 | None:intergenic | 20.0% |
| !! | AGATAAATATGATAGACTTA+CGG | - | chr3.3:89508243-89508262 | None:intergenic | 20.0% |
| !! | AGCAGAAATATATAAATAGT+AGG | - | chr3.3:89508889-89508908 | None:intergenic | 20.0% |
| !! | ATAAAATAAACTATCAGACA+AGG | + | chr3.3:89507752-89507771 | MS.gene40351:intron | 20.0% |
| !! | ATATCAAATTGAAATTATGC+AGG | + | chr3.3:89509709-89509728 | MS.gene40351:intron | 20.0% |
| !! | ATTATTAGATGATGTGAATA+AGG | - | chr3.3:89507927-89507946 | None:intergenic | 20.0% |
| !! | CAACATTTAAAAAGATTACA+TGG | - | chr3.3:89507523-89507542 | None:intergenic | 20.0% |
| !! | GAAAAAAAACAATTCAGTAT+GGG | - | chr3.3:89509829-89509848 | None:intergenic | 20.0% |
| !! | TAAAAAGATTACATGGTTTA+GGG | - | chr3.3:89507516-89507535 | None:intergenic | 20.0% |
| !! | TACCAATATCACATAATATA+AGG | - | chr3.3:89507706-89507725 | None:intergenic | 20.0% |
| !! | TTAAAAAGATTACATGGTTT+AGG | - | chr3.3:89507517-89507536 | None:intergenic | 20.0% |
| !! | TTCATCTATATACAAGAAAA+TGG | - | chr3.3:89507635-89507654 | None:intergenic | 20.0% |
| !! | TTCCTTATATTATGTGATAT+TGG | + | chr3.3:89507701-89507720 | MS.gene40351:intron | 20.0% |
| !!! | AATTATGATAACTGAGATTT+TGG | - | chr3.3:89505766-89505785 | None:intergenic | 20.0% |
| !!! | AGATTCTATTTTCAATTATC+TGG | - | chr3.3:89509166-89509185 | None:intergenic | 20.0% |
| !!! | ATAATCATGGATAACTTTTA+AGG | - | chr3.3:89507561-89507580 | None:intergenic | 20.0% |
| !!! | GTATTATTTTTGAAGCATTT+TGG | + | chr3.3:89506211-89506230 | MS.gene40351:intron | 20.0% |
| !!! | TATTATGTGATATTGGTAAT+TGG | + | chr3.3:89507708-89507727 | MS.gene40351:intron | 20.0% |
| !!! | TATTTTTTCCTCAGAAAAAA+GGG | + | chr3.3:89506300-89506319 | MS.gene40351:intron | 20.0% |
| !!! | TTATTTTTTCCTCAGAAAAA+AGG | + | chr3.3:89506299-89506318 | MS.gene40351:intron | 20.0% |
| !!! | TTTTATTAATTGATGCTTAC+TGG | + | chr3.3:89507793-89507812 | MS.gene40351:intron | 20.0% |
| !!! | TTTTTTTTCATTAAGTGGTT+AGG | - | chr3.3:89507122-89507141 | None:intergenic | 20.0% |
| ! | AAAAAGATTACATGGTTTAG+GGG | - | chr3.3:89507515-89507534 | None:intergenic | 25.0% |
| ! | AACACAAGAATTGAAGAAAA+AGG | + | chr3.3:89506040-89506059 | MS.gene40351:CDS | 25.0% |
| ! | ACTCTAGCTATTAAGATAAT+AGG | - | chr3.3:89509755-89509774 | None:intergenic | 25.0% |
| ! | CAAATACAACTAGAAATATC+AGG | - | chr3.3:89509874-89509893 | None:intergenic | 25.0% |
| ! | CTTCAATAAATTATAGATCC+AGG | + | chr3.3:89508080-89508099 | MS.gene40351:intron | 25.0% |
| ! | GAAACTTATACCTGATAATA+AGG | - | chr3.3:89508631-89508650 | None:intergenic | 25.0% |
| ! | GGAAAAAAAACAATTCAGTA+TGG | - | chr3.3:89509830-89509849 | None:intergenic | 25.0% |
| ! | GGCTAGTAATTTACAAATTT+AGG | + | chr3.3:89505942-89505961 | MS.gene40351:intron | 25.0% |
| ! | TAAATAAAATCACACATTGC+AGG | - | chr3.3:89509109-89509128 | None:intergenic | 25.0% |
| ! | TATTTAGGAAGAAATGTTGA+AGG | + | chr3.3:89507428-89507447 | MS.gene40351:intron | 25.0% |
| ! | TCAATTAGTTGAAATTACTG+AGG | + | chr3.3:89505909-89505928 | MS.gene40351:intron | 25.0% |
| ! | TCTTGTATATAGATGAATGA+AGG | + | chr3.3:89507638-89507657 | MS.gene40351:intron | 25.0% |
| ! | TTGAAAATAGAATCTTCAGT+TGG | + | chr3.3:89509171-89509190 | MS.gene40351:intron | 25.0% |
| ! | TTTAAGCAAATAACAACAAG+TGG | - | chr3.3:89506266-89506285 | None:intergenic | 25.0% |
| !! | AATTACTGAGGAAATTTTTG+TGG | + | chr3.3:89505921-89505940 | MS.gene40351:intron | 25.0% |
| !! | ATGAATCTTTTTCTCTAACT+TGG | - | chr3.3:89506534-89506553 | None:intergenic | 25.0% |
| !! | CTTTCATACTTTTGATCTTT+AGG | + | chr3.3:89508261-89508280 | MS.gene40351:intron | 25.0% |
| !! | GTTTGTTTATGTTTTTCTTG+AGG | + | chr3.3:89508671-89508690 | MS.gene40351:intron | 25.0% |
| !! | TCTTTTCATGATATGCTTTT+TGG | + | chr3.3:89509316-89509335 | MS.gene40351:intron | 25.0% |
| !! | TGAAGTAAATCTGAGTTTTA+TGG | + | chr3.3:89506617-89506636 | MS.gene40351:intron | 25.0% |
| !!! | TCCTAGTTTGTTAAATACTT+GGG | + | chr3.3:89508405-89508424 | MS.gene40351:intron | 25.0% |
| !!! | TTAGGGATTTTTCAATCATT+AGG | + | chr3.3:89506176-89506195 | MS.gene40351:intron | 25.0% |
| AAGTAACGAAGGAGAAAATT+AGG | - | chr3.3:89505648-89505667 | None:intergenic | 30.0% | |
| ACAACAACAACAAATACAAG+AGG | - | chr3.3:89509060-89509079 | None:intergenic | 30.0% | |
| ACAGGTTCAAAAGATAAATG+AGG | + | chr3.3:89507261-89507280 | MS.gene40351:intron | 30.0% | |
| ACTTGTATATTCTCAACATG+AGG | - | chr3.3:89508771-89508790 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAATTAAACC+TGG | - | chr3.3:89508101-89508120 | None:intergenic | 30.0% | |
| AGACAATTCAACACTCAAAA+AGG | - | chr3.3:89509521-89509540 | None:intergenic | 30.0% | |
| AGCTATTAAGATAATAGGCA+AGG | - | chr3.3:89509750-89509769 | None:intergenic | 30.0% | |
| AGTAACGAAGGAGAAAATTA+GGG | - | chr3.3:89505647-89505666 | None:intergenic | 30.0% | |
| AGTAAGTGCATATATGGAAA+GGG | - | chr3.3:89509851-89509870 | None:intergenic | 30.0% | |
| AGTTTCTTCATTGAACTGTA+TGG | + | chr3.3:89508645-89508664 | MS.gene40351:intron | 30.0% | |
| ATGTGTAGATCCTTATTATC+AGG | + | chr3.3:89508618-89508637 | MS.gene40351:CDS | 30.0% | |
| ATTGCAACATGATATAGACA+TGG | + | chr3.3:89509341-89509360 | MS.gene40351:intron | 30.0% | |
| ATTTCAAAGAATAAGCAGTG+AGG | - | chr3.3:89509431-89509450 | None:intergenic | 30.0% | |
| CACAAAATGATAAGCAGAAA+GGG | - | chr3.3:89509373-89509392 | None:intergenic | 30.0% | |
| CAGATAAAAAAAGTTAGCAG+AGG | - | chr3.3:89506971-89506990 | None:intergenic | 30.0% | |
| CATTTCTTCAGTTGAAAACA+GGG | - | chr3.3:89508460-89508479 | None:intergenic | 30.0% | |
| GAATTGTCTTTCGTTATTCA+AGG | + | chr3.3:89509532-89509551 | MS.gene40351:intron | 30.0% | |
| GATTGAAAAATCCCTAAAGA+GGG | - | chr3.3:89506173-89506192 | None:intergenic | 30.0% | |
| GTGATGTCATAATATCAAGT+TGG | - | chr3.3:89509258-89509277 | None:intergenic | 30.0% | |
| TAAAGAATTGGAATGGTTTG+CGG | + | chr3.3:89509613-89509632 | MS.gene40351:CDS | 30.0% | |
| TATTAGTTCCAGATCTTGAA+CGG | + | chr3.3:89509454-89509473 | MS.gene40351:intron | 30.0% | |
| TCACAAAATGATAAGCAGAA+AGG | - | chr3.3:89509374-89509393 | None:intergenic | 30.0% | |
| TCATGTTGAGAATATACAAG+TGG | + | chr3.3:89508770-89508789 | MS.gene40351:CDS | 30.0% | |
| TGAGCGAGGTAATAATTTAT+TGG | + | chr3.3:89507484-89507503 | MS.gene40351:intron | 30.0% | |
| TGATTGAAAAATCCCTAAAG+AGG | - | chr3.3:89506174-89506193 | None:intergenic | 30.0% | |
| TGATTTGAACTCAAAACTAG+AGG | + | chr3.3:89506553-89506572 | MS.gene40351:CDS | 30.0% | |
| TGTACACTATATTCGTAGTA+AGG | + | chr3.3:89507861-89507880 | MS.gene40351:CDS | 30.0% | |
| TTGACTAGATTTCAGATTGT+GGG | - | chr3.3:89509233-89509252 | None:intergenic | 30.0% | |
| TTGCTACTAAAGAATTGGAA+TGG | + | chr3.3:89509606-89509625 | MS.gene40351:CDS | 30.0% | |
| TTTCAAAGAATAAGCAGTGA+GGG | - | chr3.3:89509430-89509449 | None:intergenic | 30.0% | |
| TTTGACTAGATTTCAGATTG+TGG | - | chr3.3:89509234-89509253 | None:intergenic | 30.0% | |
| ! | AACTTTCACATTGCCTATTT+TGG | + | chr3.3:89507023-89507042 | MS.gene40351:intron | 30.0% |
| ! | ACTTTCACATTGCCTATTTT+GGG | + | chr3.3:89507024-89507043 | MS.gene40351:intron | 30.0% |
| ! | ATCTAAGACTAACCAGAAAA+TGG | - | chr3.3:89509786-89509805 | None:intergenic | 30.0% |
| ! | CTGTTTTCAACTGAAGAAAT+GGG | + | chr3.3:89508459-89508478 | MS.gene40351:intron | 30.0% |
| ! | TAGTCTGAAATTCTTAATGC+AGG | + | chr3.3:89506442-89506461 | MS.gene40351:intron | 30.0% |
| ! | TCATTTATCTTTTGAACCTG+TGG | - | chr3.3:89507262-89507281 | None:intergenic | 30.0% |
| ! | TCTGCTTATCATTTTGTGAT+GGG | + | chr3.3:89509375-89509394 | MS.gene40351:intron | 30.0% |
| ! | TTCTGCTTATCATTTTGTGA+TGG | + | chr3.3:89509374-89509393 | MS.gene40351:intron | 30.0% |
| ! | TTTGTGAATCGTGATTTTTG+TGG | + | chr3.3:89505975-89505994 | MS.gene40351:intron | 30.0% |
| !! | CTCCTAGTTTGTTAAATACT+TGG | + | chr3.3:89508404-89508423 | MS.gene40351:intron | 30.0% |
| !! | TGGAATTGAGTTGATCTAAT+TGG | - | chr3.3:89505720-89505739 | None:intergenic | 30.0% |
| !! | TTTTCTTTTTTGTTAGTCCG+TGG | + | chr3.3:89507951-89507970 | MS.gene40351:intron | 30.0% |
| !!! | AGTTTTTTTTCTCCTTCATC+CGG | + | chr3.3:89508964-89508983 | MS.gene40351:intron | 30.0% |
| !!! | GGATAACTTTTAAGGTTTTC+TGG | - | chr3.3:89507553-89507572 | None:intergenic | 30.0% |
| !!! | TAACTTTTAAGGTTTTCTGG+TGG | - | chr3.3:89507550-89507569 | None:intergenic | 30.0% |
| AAAACAAACCGTTCAAGATC+TGG | - | chr3.3:89509465-89509484 | None:intergenic | 35.0% | |
| AAAACAGTGAGAAAGTGAAC+TGG | + | chr3.3:89506495-89506514 | MS.gene40351:CDS | 35.0% | |
| AAACAGTGAGAAAGTGAACT+GGG | + | chr3.3:89506496-89506515 | MS.gene40351:CDS | 35.0% | |
| AATAGGCAATGTGAAAGTTG+TGG | - | chr3.3:89507022-89507041 | None:intergenic | 35.0% | |
| AATCATTACACCTGCACATT+TGG | - | chr3.3:89507084-89507103 | None:intergenic | 35.0% | |
| AATTCCAAGATCCAATTCCT+CGG | + | chr3.3:89505733-89505752 | MS.gene40351:CDS | 35.0% | |
| ACAACAAATACAAGAGGATC+AGG | - | chr3.3:89509054-89509073 | None:intergenic | 35.0% | |
| ACGATGAGGAAACATTAGTA+TGG | - | chr3.3:89509280-89509299 | None:intergenic | 35.0% | |
| ACTAATGTTTCCTCATCGTA+GGG | + | chr3.3:89509281-89509300 | MS.gene40351:intron | 35.0% | |
| AGAACAACCTTCTTTGTGTA+GGG | - | chr3.3:89508804-89508823 | None:intergenic | 35.0% | |
| AGAGTCATTGGAATGAACAT+GGG | + | chr3.3:89507977-89507996 | MS.gene40351:CDS | 35.0% | |
| ATAGGCAATGTGAAAGTTGT+GGG | - | chr3.3:89507021-89507040 | None:intergenic | 35.0% | |
| ATCAGGAGTAAGTGCATATA+TGG | - | chr3.3:89509857-89509876 | None:intergenic | 35.0% | |
| CACACTGTTGCTAATAATCA+TGG | - | chr3.3:89507574-89507593 | None:intergenic | 35.0% | |
| CATGATTATTAGCAACAGTG+TGG | + | chr3.3:89507572-89507591 | MS.gene40351:intron | 35.0% | |
| CCAATGTTGAAACTCCTAAA+TGG | - | chr3.3:89508377-89508396 | None:intergenic | 35.0% | |
| CCATTTAGGAGTTTCAACAT+TGG | + | chr3.3:89508374-89508393 | MS.gene40351:intron | 35.0% | |
| CCATTTCTTCAGTTGAAAAC+AGG | - | chr3.3:89508461-89508480 | None:intergenic | 35.0% | |
| CGGGTAAAACAAACAAATTG+TGG | - | chr3.3:89508334-89508353 | None:intergenic | 35.0% | |
| GAATGCTACTCAACTTATCT+TGG | - | chr3.3:89506097-89506116 | None:intergenic | 35.0% | |
| GACACGTTAATAAAGCAATG+AGG | - | chr3.3:89506855-89506874 | None:intergenic | 35.0% | |
| GAGTAAGTGCATATATGGAA+AGG | - | chr3.3:89509852-89509871 | None:intergenic | 35.0% | |
| GCCCAAGTATTTAACAAACT+AGG | - | chr3.3:89508409-89508428 | None:intergenic | 35.0% | |
| GTTGGAAGTGATATCTCAAA+AGG | + | chr3.3:89508008-89508027 | MS.gene40351:CDS | 35.0% | |
| TAAATGGTCAACAAGCTATC+AGG | - | chr3.3:89508361-89508380 | None:intergenic | 35.0% | |
| TAATTGGATCTTAAGAGCAG+AGG | - | chr3.3:89505704-89505723 | None:intergenic | 35.0% | |
| TACTAATGTTTCCTCATCGT+AGG | + | chr3.3:89509280-89509299 | MS.gene40351:intron | 35.0% | |
| TCTGGTGTAGATATACAGTA+TGG | - | chr3.3:89509148-89509167 | None:intergenic | 35.0% | |
| TGAAGTTTACAAGTCCTCAA+AGG | + | chr3.3:89508561-89508580 | MS.gene40351:CDS | 35.0% | |
| TTCCTAAATCGATGTTACTG+TGG | + | chr3.3:89505875-89505894 | MS.gene40351:intron | 35.0% | |
| ! | CCTGTTTTCAACTGAAGAAA+TGG | + | chr3.3:89508458-89508477 | MS.gene40351:intron | 35.0% |
| ! | TTTCTTGAGGTATTCTCAAC+CGG | + | chr3.3:89508684-89508703 | MS.gene40351:intron | 35.0% |
| ! | TTTTCACTAGACCCTCTTTA+GGG | + | chr3.3:89506159-89506178 | MS.gene40351:intron | 35.0% |
| ! | TTTTCTTGCCAATGTTGTGT+AGG | + | chr3.3:89507359-89507378 | MS.gene40351:intron | 35.0% |
| !! | ATTCTTTTGCCTTGTTCAAG+TGG | - | chr3.3:89508600-89508619 | None:intergenic | 35.0% |
| !! | TGATAGCTTGTTGACCATTT+AGG | + | chr3.3:89508360-89508379 | MS.gene40351:intron | 35.0% |
| !! | TTCTTTTGCCTTGTTCAAGT+GGG | - | chr3.3:89508599-89508618 | None:intergenic | 35.0% |
| !!! | CAATTTGTTTGTTTTACCCG+TGG | + | chr3.3:89508334-89508353 | MS.gene40351:intron | 35.0% |
| !!! | GAGTTTTTTCTGCCATTTTC+TGG | + | chr3.3:89509771-89509790 | MS.gene40351:CDS | 35.0% |
| !!! | GTTTTTTTTCTCCTTCATCC+GGG | + | chr3.3:89508965-89508984 | MS.gene40351:intron | 35.0% |
| AAATACAAGAGGATCAGGAG+GGG | - | chr3.3:89509049-89509068 | None:intergenic | 40.0% | |
| AAATCCACCATCTAACCACA+GGG | - | chr3.3:89508304-89508323 | None:intergenic | 40.0% | |
| AAGAAGGTTGTTCTCGCTTA+TGG | + | chr3.3:89508810-89508829 | MS.gene40351:CDS | 40.0% | |
| AATGTTGAAGGCAAAGCTAG+AGG | + | chr3.3:89507440-89507459 | MS.gene40351:CDS | 40.0% | |
| ACAAATACAAGAGGATCAGG+AGG | - | chr3.3:89509051-89509070 | None:intergenic | 40.0% | |
| ACACGCACACAAACAAGAAT+AGG | - | chr3.3:89506649-89506668 | None:intergenic | 40.0% | |
| AGAAAGTGAACTGGGAATCT+CGG | + | chr3.3:89506504-89506523 | MS.gene40351:CDS | 40.0% | |
| AGAAGGTTGTTCTCGCTTAT+GGG | + | chr3.3:89508811-89508830 | MS.gene40351:CDS | 40.0% | |
| AGAGGAATCAGAATCTTCGA+TGG | - | chr3.3:89505686-89505705 | None:intergenic | 40.0% | |
| AGGAAAGTAAAGTCTGAACC+TGG | - | chr3.3:89508869-89508888 | None:intergenic | 40.0% | |
| ATAGCGAAGACGAAAAGCTT+CGG | - | chr3.3:89505616-89505635 | None:intergenic | 40.0% | |
| ATATAGTGTACAGCAAGCCA+AGG | - | chr3.3:89507853-89507872 | None:intergenic | 40.0% | |
| ATTCTAGGCCCTAGAGAAAA+AGG | + | chr3.3:89508172-89508191 | MS.gene40351:intron | 40.0% | |
| CAAATACAAGAGGATCAGGA+GGG | - | chr3.3:89509050-89509069 | None:intergenic | 40.0% | |
| CATTCAATCCTTGCAGAATG+AGG | + | chr3.3:89506112-89506131 | MS.gene40351:CDS | 40.0% | |
| CTAATGTTTCCTCATCGTAG+GGG | + | chr3.3:89509282-89509301 | MS.gene40351:intron | 40.0% | |
| CTATCAGACAAGGTGTATTG+TGG | + | chr3.3:89507762-89507781 | MS.gene40351:intron | 40.0% | |
| GAAGGAGAAAATTAGGGCAA+CGG | - | chr3.3:89505641-89505660 | None:intergenic | 40.0% | |
| GAGAACAACCTTCTTTGTGT+AGG | - | chr3.3:89508805-89508824 | None:intergenic | 40.0% | |
| GAGAGTCATTGGAATGAACA+TGG | + | chr3.3:89507976-89507995 | MS.gene40351:CDS | 40.0% | |
| GAGGATGTAAGTTGTACACT+TGG | + | chr3.3:89506572-89506591 | MS.gene40351:intron | 40.0% | |
| GGTGTAGATATACAGTATGG+AGG | - | chr3.3:89509145-89509164 | None:intergenic | 40.0% | |
| GGTGTTAATGATCAGACTCA+TGG | + | chr3.3:89507814-89507833 | MS.gene40351:intron | 40.0% | |
| TAATGTTTCCTCATCGTAGG+GGG | + | chr3.3:89509283-89509302 | MS.gene40351:intron | 40.0% | |
| TAGCAAGCCATACATTGATC+AGG | + | chr3.3:89508728-89508747 | MS.gene40351:CDS | 40.0% | |
| TATCATCTGCAGCAGCAAAA+AGG | + | chr3.3:89509928-89509947 | MS.gene40351:intron | 40.0% | |
| TCCTCAGAAAAAAGGGTCAT+TGG | + | chr3.3:89506307-89506326 | MS.gene40351:intron | 40.0% | |
| TCTCGCTTATGGGAATTTCT+TGG | + | chr3.3:89508821-89508840 | MS.gene40351:CDS | 40.0% | |
| TGAGATATCACTTCCAACAG+AGG | - | chr3.3:89508006-89508025 | None:intergenic | 40.0% | |
| TTGAGTAGTGTATTCTCCAC+AGG | + | chr3.3:89507243-89507262 | MS.gene40351:intron | 40.0% | |
| TTGGATTGATACCGAGGAAT+TGG | - | chr3.3:89505747-89505766 | None:intergenic | 40.0% | |
| ! | AAAAGGCACAAGCTGGAAAA+TGG | + | chr3.3:89508189-89508208 | MS.gene40351:CDS | 40.0% |
| ! | AAAGGCACAAGCTGGAAAAT+GGG | + | chr3.3:89508190-89508209 | MS.gene40351:CDS | 40.0% |
| ! | AAGTTGTGGGAGTGTAGTAA+AGG | - | chr3.3:89507008-89507027 | None:intergenic | 40.0% |
| ! | ACGCTTTTCCTATGCATTCT+AGG | + | chr3.3:89508157-89508176 | MS.gene40351:intron | 40.0% |
| ! | AGCTTGTGCCTTTTTCTCTA+GGG | - | chr3.3:89508183-89508202 | None:intergenic | 40.0% |
| ! | CTTTTCACTAGACCCTCTTT+AGG | + | chr3.3:89506158-89506177 | MS.gene40351:intron | 40.0% |
| ! | GAATGGTTTGCGGTATGTAT+TGG | + | chr3.3:89509623-89509642 | MS.gene40351:intron | 40.0% |
| ! | GAGATTTTGGATTGATACCG+AGG | - | chr3.3:89505753-89505772 | None:intergenic | 40.0% |
| ! | TTTCTTTTCCCCTCTTGTCT+TGG | + | chr3.3:89506879-89506898 | MS.gene40351:intron | 40.0% |
| !! | CACCACAGTAACATCGATTT+AGG | - | chr3.3:89505880-89505899 | None:intergenic | 40.0% |
| !! | GTTTTAATCGTTTCCACGTG+AGG | - | chr3.3:89508221-89508240 | None:intergenic | 40.0% |
| !! | TAAGAGCACGTTCAGTTTTG+CGG | - | chr3.3:89507303-89507322 | None:intergenic | 40.0% |
| !! | TCTTTTGCCTTGTTCAAGTG+GGG | - | chr3.3:89508598-89508617 | None:intergenic | 40.0% |
| !!! | TCCAATGACCCTTTTTTCTG+AGG | - | chr3.3:89506311-89506330 | None:intergenic | 40.0% |
| ACCACCATCCTACACAACAT+TGG | - | chr3.3:89507370-89507389 | None:intergenic | 45.0% | |
| ACTCACAGTCTCACATACCT+CGG | - | chr3.3:89507332-89507351 | None:intergenic | 45.0% | |
| AGAAACCACCAAGACAAGAG+GGG | - | chr3.3:89506890-89506909 | None:intergenic | 45.0% | |
| AGAAGCAACCTCATTCTGCA+AGG | - | chr3.3:89506123-89506142 | None:intergenic | 45.0% | |
| AGATAATAGGCAAGGCCAGA+AGG | - | chr3.3:89509742-89509761 | None:intergenic | 45.0% | |
| ATGATCAGACTCATGGTGCT+TGG | + | chr3.3:89507821-89507840 | MS.gene40351:intron | 45.0% | |
| ATTCCAATGACTCTCAGCCA+CGG | - | chr3.3:89507971-89507990 | None:intergenic | 45.0% | |
| CAAATCCACCATCTAACCAC+AGG | - | chr3.3:89508305-89508324 | None:intergenic | 45.0% | |
| CAGAAACCACCAAGACAAGA+GGG | - | chr3.3:89506891-89506910 | None:intergenic | 45.0% | |
| CCACAGCAATGACCCAAAAT+AGG | - | chr3.3:89507039-89507058 | None:intergenic | 45.0% | |
| CTTGCCAATGTTGTGTAGGA+TGG | + | chr3.3:89507363-89507382 | MS.gene40351:intron | 45.0% | |
| GAAAGTGAACTGGGAATCTC+GGG | + | chr3.3:89506505-89506524 | MS.gene40351:CDS | 45.0% | |
| GAATGAGGTTGCTTCTCTTC+AGG | + | chr3.3:89506127-89506146 | MS.gene40351:CDS | 45.0% | |
| GATAATAGGCAAGGCCAGAA+GGG | - | chr3.3:89509741-89509760 | None:intergenic | 45.0% | |
| GATACCGAGGAATTGGATCT+TGG | - | chr3.3:89505740-89505759 | None:intergenic | 45.0% | |
| GTAGCGACCTGATCAATGTA+TGG | - | chr3.3:89508738-89508757 | None:intergenic | 45.0% | |
| GTGGTCTGTGGTGAAAACAA+AGG | + | chr3.3:89508501-89508520 | MS.gene40351:CDS | 45.0% | |
| TAATGATTCGTGGCCGCTAT+GGG | + | chr3.3:89507096-89507115 | MS.gene40351:intron | 45.0% | |
| TCAACAAGCTATCAGGACCA+CGG | - | chr3.3:89508354-89508373 | None:intergenic | 45.0% | |
| TCATCACTAGCCAAATGTGC+AGG | + | chr3.3:89507071-89507090 | MS.gene40351:intron | 45.0% | |
| TGAGCTAAGGGATAAGGAGT+TGG | - | chr3.3:89509007-89509026 | None:intergenic | 45.0% | |
| TGGTTTCTGCTGAAAGTTGC+TGG | + | chr3.3:89506902-89506921 | MS.gene40351:intron | 45.0% | |
| TGTGAAAGAACAGTGGTCTG+TGG | + | chr3.3:89508489-89508508 | MS.gene40351:CDS | 45.0% | |
| TGTGCAGGTGTAATGATTCG+TGG | + | chr3.3:89507086-89507105 | MS.gene40351:intron | 45.0% | |
| TTAAGTGGTTAGGCCCATAG+CGG | - | chr3.3:89507112-89507131 | None:intergenic | 45.0% | |
| TTCCAGCTGTGAAAGAACAG+TGG | + | chr3.3:89508482-89508501 | MS.gene40351:CDS | 45.0% | |
| TTCGATGGAAACATCGACCT+CGG | - | chr3.3:89505671-89505690 | None:intergenic | 45.0% | |
| TTTCTCCTTCGTTACTTCCG+AGG | + | chr3.3:89505651-89505670 | MS.gene40351:CDS | 45.0% | |
| ! | CAGCTTGTGCCTTTTTCTCT+AGG | - | chr3.3:89508184-89508203 | None:intergenic | 45.0% |
| ! | CTAGAGAAAAAGGCACAAGC+TGG | + | chr3.3:89508182-89508201 | MS.gene40351:CDS | 45.0% |
| ! | CTGGTTTGAGCTAAGGGATA+AGG | - | chr3.3:89509013-89509032 | None:intergenic | 45.0% |
| ! | TCTGAAGCCCTACACAAAGA+AGG | + | chr3.3:89508794-89508813 | MS.gene40351:CDS | 45.0% |
| ! | TGTGGGAGTGTAGTAAAGGT+GGG | - | chr3.3:89507004-89507023 | None:intergenic | 45.0% |
| ! | TTGTGGGAGTGTAGTAAAGG+TGG | - | chr3.3:89507005-89507024 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr3.3:89509020-89509039 | None:intergenic | 45.0% |
| !! | CCTATTTTGGGTCATTGCTG+TGG | + | chr3.3:89507036-89507055 | MS.gene40351:intron | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr3.3:89509019-89509038 | None:intergenic | 45.0% |
| !!! | CGTGCTTTTTCAACGTCTCT+TGG | - | chr3.3:89509571-89509590 | None:intergenic | 45.0% |
| !! | TTATTACTAAAATATAAATA+TGG | + | chr3.3:89509668-89509687 | MS.gene40351:intron | 5.0% |
| !!! | ATATTTTAGTAATAATATTT+AGG | - | chr3.3:89509663-89509682 | None:intergenic | 5.0% |
| AAAAGGGTCATTGGATGCCG+AGG | + | chr3.3:89506316-89506335 | MS.gene40351:CDS | 50.0% | |
| AACCTGGCGATGATATGCAG+TGG | - | chr3.3:89508853-89508872 | None:intergenic | 50.0% | |
| ACGTCTCTTGGACAGTAGCT+TGG | - | chr3.3:89509559-89509578 | None:intergenic | 50.0% | |
| ACGTGCTCTTAAAGTTGCCG+AGG | + | chr3.3:89507312-89507331 | MS.gene40351:CDS | 50.0% | |
| ACTCGTCGTAAAGCTAAGCG+AGG | + | chr3.3:89509986-89510005 | MS.gene40351:CDS | 50.0% | |
| ACTGCAATTACTGTGCCCTG+TGG | + | chr3.3:89508286-89508305 | MS.gene40351:intron | 50.0% | |
| ACTTGCTCCCCACTTGAACA+AGG | + | chr3.3:89508588-89508607 | MS.gene40351:CDS | 50.0% | |
| AGCTTTACGACGAGTGTGGT+GGG | - | chr3.3:89509981-89510000 | None:intergenic | 50.0% | |
| ATCGACCTCGGAAGTAACGA+AGG | - | chr3.3:89505659-89505678 | None:intergenic | 50.0% | |
| CAAAGCAAAAGAGCTGAGCG+AGG | + | chr3.3:89507470-89507489 | MS.gene40351:CDS | 50.0% | |
| CAACAAGCTATCAGGACCAC+GGG | - | chr3.3:89508353-89508372 | None:intergenic | 50.0% | |
| CAGTGCTTGCACATGAGGTT+CGG | - | chr3.3:89508527-89508546 | None:intergenic | 50.0% | |
| CATTGATCAGGTCGCTACTG+CGG | + | chr3.3:89508740-89508759 | MS.gene40351:CDS | 50.0% | |
| CTCAATGCTCATGCCTGGAA+GGG | + | chr3.3:89506823-89506842 | MS.gene40351:intron | 50.0% | |
| CTTTCGAGCTTCCTGTCAAC+CGG | - | chr3.3:89508706-89508725 | None:intergenic | 50.0% | |
| GAAGTCAGTGCTTGCACATG+AGG | - | chr3.3:89508532-89508551 | None:intergenic | 50.0% | |
| GACCACTGTTCTTTCACAGC+TGG | - | chr3.3:89508487-89508506 | None:intergenic | 50.0% | |
| GACCTGCTTCTGTAGTTCAC+CGG | - | chr3.3:89506369-89506388 | None:intergenic | 50.0% | |
| GATAAGGAGTTGGAGGTCCT+GGG | - | chr3.3:89508997-89509016 | None:intergenic | 50.0% | |
| GCAGAAACCACCAAGACAAG+AGG | - | chr3.3:89506892-89506911 | None:intergenic | 50.0% | |
| GCCAATGTTGTGTAGGATGG+TGG | + | chr3.3:89507366-89507385 | MS.gene40351:intron | 50.0% | |
| GCTAAGGGATAAGGAGTTGG+AGG | - | chr3.3:89509004-89509023 | None:intergenic | 50.0% | |
| GGTATTCTCAACCGGTTGAC+AGG | + | chr3.3:89508692-89508711 | MS.gene40351:intron | 50.0% | |
| GTAATGATTCGTGGCCGCTA+TGG | + | chr3.3:89507095-89507114 | MS.gene40351:intron | 50.0% | |
| TACTGTGCCCTGTGGTTAGA+TGG | + | chr3.3:89508294-89508313 | MS.gene40351:intron | 50.0% | |
| TAGTGTACAGCAAGCCAAGG+AGG | - | chr3.3:89507850-89507869 | None:intergenic | 50.0% | |
| TGAACATGGGAAGCCTCTGT+TGG | + | chr3.3:89507990-89508009 | MS.gene40351:CDS | 50.0% | |
| TGCTGCTGCTGTTGTTAGCA+AGG | + | chr3.3:89509083-89509102 | MS.gene40351:intron | 50.0% | |
| ! | CTCGCTCAGCTCTTTTGCTT+TGG | - | chr3.3:89507472-89507491 | None:intergenic | 50.0% |
| ! | CTTTTCCCCTCTTGTCTTGG+TGG | + | chr3.3:89506882-89506901 | MS.gene40351:intron | 50.0% |
| ! | TAGCTTTACGACGAGTGTGG+TGG | - | chr3.3:89509982-89510001 | None:intergenic | 50.0% |
| !! | AAAATGGGCTGAACCTCACG+TGG | + | chr3.3:89508205-89508224 | MS.gene40351:CDS | 50.0% |
| !! | CATGAGCATTGAGCATGGCA+AGG | - | chr3.3:89506816-89506835 | None:intergenic | 50.0% |
| !! | CTCTAGGGCCTAGAATGCAT+AGG | - | chr3.3:89508168-89508187 | None:intergenic | 50.0% |
| !! | GCTTAGCTTTACGACGAGTG+TGG | - | chr3.3:89509985-89510004 | None:intergenic | 50.0% |
| AATGAGGACGATGCCCTTCC+AGG | - | chr3.3:89506839-89506858 | None:intergenic | 55.0% | |
| ACAAGAGGATCAGGAGGGGT+TGG | - | chr3.3:89509045-89509064 | None:intergenic | 55.0% | |
| AGCCTTTCCAACCTGCTCCT+CGG | - | chr3.3:89506336-89506355 | None:intergenic | 55.0% | |
| AGTCCGTGGCTGAGAGTCAT+TGG | + | chr3.3:89507965-89507984 | MS.gene40351:intron | 55.0% | |
| ATGGTGCTTGGCTTCCTCCT+TGG | + | chr3.3:89507833-89507852 | MS.gene40351:CDS | 55.0% | |
| CAAGAGGATCAGGAGGGGTT+GGG | - | chr3.3:89509044-89509063 | None:intergenic | 55.0% | |
| CCATGCTCAATGCTCATGCC+TGG | + | chr3.3:89506818-89506837 | MS.gene40351:intron | 55.0% | |
| CTTCATCCGGGTTTCAACCC+AGG | + | chr3.3:89508977-89508996 | MS.gene40351:intron | 55.0% | |
| GCAAGTAAACCCGCTCGAAG+TGG | + | chr3.3:89509950-89509969 | MS.gene40351:CDS | 55.0% | |
| GCGAAGACGAAAAGCTTCGG+AGG | - | chr3.3:89505613-89505632 | None:intergenic | 55.0% | |
| GCTCAATGCTCATGCCTGGA+AGG | + | chr3.3:89506822-89506841 | MS.gene40351:intron | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+TGG | - | chr3.3:89508998-89509017 | None:intergenic | 55.0% | |
| GTGGGTGTTTCCACTTCGAG+CGG | - | chr3.3:89509963-89509982 | None:intergenic | 55.0% | |
| TGCCACTGCATATCATCGCC+AGG | + | chr3.3:89508848-89508867 | MS.gene40351:CDS | 55.0% | |
| TGCCGGTGAACTACAGAAGC+AGG | + | chr3.3:89506364-89506383 | MS.gene40351:CDS | 55.0% | |
| TGGGTGTTTCCACTTCGAGC+GGG | - | chr3.3:89509962-89509981 | None:intergenic | 55.0% | |
| TGTGCCCTGTGGTTAGATGG+TGG | + | chr3.3:89508297-89508316 | MS.gene40351:intron | 55.0% | |
| ! | CTGGGTTGAAACCCGGATGA+AGG | - | chr3.3:89508979-89508998 | None:intergenic | 55.0% |
| !! | CCAGGCATGAGCATTGAGCA+TGG | - | chr3.3:89506821-89506840 | None:intergenic | 55.0% |
| ACACACAGCCCCCTACGATG+AGG | - | chr3.3:89509294-89509313 | None:intergenic | 60.0% | |
| GAGGGGTTGGGTAGCTCAAC+TGG | - | chr3.3:89509032-89509051 | None:intergenic | 60.0% | |
| GGAAAGGCTCATGCACGTGC+CGG | + | chr3.3:89506347-89506366 | MS.gene40351:CDS | 60.0% | |
| GGGAGCAAGTGCGTCCTTTG+AGG | - | chr3.3:89508578-89508597 | None:intergenic | 60.0% | |
| GTCATTGGATGCCGAGGAGC+AGG | + | chr3.3:89506322-89506341 | MS.gene40351:CDS | 60.0% | |
| TATGCAGGCCTCTGCCCTTC+TGG | + | chr3.3:89509724-89509743 | MS.gene40351:intron | 60.0% | |
| TTGGATGCCGAGGAGCAGGT+TGG | + | chr3.3:89506326-89506345 | MS.gene40351:CDS | 60.0% | |
| ! | GGAGGTCCTGGGTTGAAACC+CGG | - | chr3.3:89508986-89509005 | None:intergenic | 60.0% |
| ! | TGCCGAGGAGCAGGTTGGAA+AGG | + | chr3.3:89506331-89506350 | MS.gene40351:CDS | 60.0% |
| AGGCAAGGCCAGAAGGGCAG+AGG | - | chr3.3:89509735-89509754 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89505604 | 89510024 | 89505604 | ID=MS.gene40351 |
| chr3.3 | mRNA | 89505604 | 89510024 | 89505604 | ID=MS.gene40351.t1;Parent=MS.gene40351 |
| chr3.3 | exon | 89505604 | 89505754 | 89505604 | ID=MS.gene40351.t1.exon1;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89505604 | 89505754 | 89505604 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89506021 | 89506148 | 89506021 | ID=MS.gene40351.t1.exon2;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89506021 | 89506148 | 89506021 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89506314 | 89506385 | 89506314 | ID=MS.gene40351.t1.exon3;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89506314 | 89506385 | 89506314 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89506464 | 89506577 | 89506464 | ID=MS.gene40351.t1.exon4;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89506464 | 89506577 | 89506464 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89507265 | 89507333 | 89507265 | ID=MS.gene40351.t1.exon5;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89507265 | 89507333 | 89507265 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89507435 | 89507491 | 89507435 | ID=MS.gene40351.t1.exon6;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89507435 | 89507491 | 89507435 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89507829 | 89507882 | 89507829 | ID=MS.gene40351.t1.exon7;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89507829 | 89507882 | 89507829 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89507967 | 89508029 | 89507967 | ID=MS.gene40351.t1.exon8;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89507967 | 89508029 | 89507967 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89508179 | 89508241 | 89508179 | ID=MS.gene40351.t1.exon9;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89508179 | 89508241 | 89508179 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89508475 | 89508639 | 89508475 | ID=MS.gene40351.t1.exon10;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89508475 | 89508639 | 89508475 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89508714 | 89508869 | 89508714 | ID=MS.gene40351.t1.exon11;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89508714 | 89508869 | 89508714 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89509554 | 89509634 | 89509554 | ID=MS.gene40351.t1.exon12;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89509554 | 89509634 | 89509554 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89509731 | 89509792 | 89509731 | ID=MS.gene40351.t1.exon13;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89509731 | 89509792 | 89509731 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| chr3.3 | exon | 89509940 | 89510024 | 89509940 | ID=MS.gene40351.t1.exon14;Parent=MS.gene40351.t1 |
| chr3.3 | CDS | 89509940 | 89510024 | 89509940 | ID=cds.MS.gene40351.t1;Parent=MS.gene40351.t1 |
| Gene Sequence |
| Protein sequence |
