AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40445

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40445.t1 MTR_5g007630 87.450 757 78 3 1 756 1 741 0.0 1338
MS.gene40445.t1 MTR_6g075440 77.075 759 154 3 1 754 1 744 0.0 1201
MS.gene40445.t1 MTR_6g075440 77.075 759 154 3 1 754 1 744 0.0 1201
MS.gene40445.t1 MTR_6g075290 65.375 774 242 5 1 754 1 768 0.0 979
MS.gene40445.t1 MTR_6g477760 69.559 680 183 3 91 748 20 697 0.0 927
MS.gene40445.t1 MTR_6g075290 61.886 774 228 7 1 754 1 727 0.0 903
MS.gene40445.t1 MTR_6g075390 64.039 723 181 7 1 717 1 650 0.0 874
MS.gene40445.t1 MTR_6g075410 57.199 757 224 9 1 749 1 665 0.0 808
MS.gene40445.t1 MTR_6g075290 69.358 545 150 4 221 754 28 566 0.0 716
MS.gene40445.t1 MTR_6g076060 74.565 460 112 1 301 755 14 473 0.0 677
MS.gene40445.t1 MTR_2g460590 39.286 588 316 16 180 743 39 609 7.20e-133 410
MS.gene40445.t1 MTR_3g091080 38.907 604 328 14 167 745 55 642 1.21e-132 410
MS.gene40445.t1 MTR_3g109030 38.898 599 329 14 180 756 69 652 2.77e-132 409
MS.gene40445.t1 MTR_4g130820 39.182 587 323 11 184 751 99 670 9.30e-130 403
MS.gene40445.t1 MTR_4g058730 39.153 567 316 11 184 736 59 610 3.79e-129 398
MS.gene40445.t1 MTR_2g094860 38.475 577 326 12 184 746 77 638 2.79e-128 398
MS.gene40445.t1 MTR_1g028370 37.370 578 330 14 184 745 83 644 7.08e-127 395
MS.gene40445.t1 MTR_7g117310 37.694 581 328 12 184 745 29 594 1.31e-125 390
MS.gene40445.t1 MTR_7g117310 37.694 581 328 12 184 745 83 648 4.99e-125 390
MS.gene40445.t1 MTR_7g117310 37.694 581 328 12 184 745 95 660 5.95e-125 390
MS.gene40445.t1 MTR_7g034605 37.393 583 329 13 180 741 40 607 2.85e-124 387
MS.gene40445.t1 MTR_8g027755 35.775 587 333 11 183 744 84 651 6.15e-120 377
MS.gene40445.t1 MTR_1g064240 37.245 588 337 12 184 756 71 641 2.03e-118 373
MS.gene40445.t1 MTR_3g088875 36.878 583 332 14 180 741 32 599 1.44e-114 362
MS.gene40445.t1 MTR_8g464570 35.666 586 335 16 183 743 61 629 3.25e-107 342
MS.gene40445.t1 MTR_2g081110 34.021 582 343 13 184 743 63 625 2.13e-101 327
MS.gene40445.t1 MTR_7g012260 35.135 592 345 13 184 751 109 685 2.42e-93 306
MS.gene40445.t1 MTR_6g075320 51.376 327 72 7 1 301 1 266 5.61e-84 269
MS.gene40445.t1 MTR_6g075460 80.000 100 20 0 656 755 26 125 1.06e-45 162
MS.gene40445.t1 MTR_2g094810 43.925 107 58 2 266 371 15 120 7.11e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40445.t1 AT3G17700 58.290 772 289 9 2 752 3 762 0.0 866
MS.gene40445.t1 AT3G17690 56.694 732 290 10 33 751 9 726 0.0 821
MS.gene40445.t1 AT3G17700 58.150 681 252 9 2 661 3 671 0.0 766
MS.gene40445.t1 AT3G17690 56.082 633 259 8 33 655 9 632 0.0 705
MS.gene40445.t1 AT3G17690 52.571 525 220 8 29 537 5 516 0.0 533
MS.gene40445.t1 AT1G19780 41.796 579 302 13 184 741 97 661 5.16e-136 420
MS.gene40445.t1 AT5G53130 40.105 571 304 12 184 736 84 634 1.07e-134 415
MS.gene40445.t1 AT1G01340 38.007 592 323 15 183 751 67 637 4.03e-132 408
MS.gene40445.t1 AT1G01340 38.007 592 323 15 183 751 62 632 6.23e-132 408
MS.gene40445.t1 AT1G15990 41.034 580 306 13 184 741 90 655 8.24e-131 406
MS.gene40445.t1 AT4G30360 38.475 590 327 14 180 748 67 641 1.31e-130 405
MS.gene40445.t1 AT4G01010 37.372 586 336 11 183 751 67 638 3.46e-130 403
MS.gene40445.t1 AT4G01010 37.372 586 336 11 183 751 67 638 3.46e-130 403
MS.gene40445.t1 AT2G28260 38.850 574 318 12 184 741 28 584 2.22e-129 399
MS.gene40445.t1 AT2G24610 39.358 592 323 15 184 754 72 648 4.19e-129 401
MS.gene40445.t1 AT2G28260 38.850 574 318 12 184 741 68 624 5.98e-129 399
MS.gene40445.t1 AT2G24610 39.358 592 323 15 184 754 87 663 9.98e-129 400
MS.gene40445.t1 AT4G30560 40.886 587 296 13 184 741 77 641 9.54e-127 394
MS.gene40445.t1 AT4G30560 40.886 587 296 13 184 741 77 641 9.54e-127 394
MS.gene40445.t1 AT4G30560 40.886 587 296 13 184 741 77 641 9.54e-127 394
MS.gene40445.t1 AT4G30560 40.886 587 296 13 184 741 103 667 1.54e-126 395
MS.gene40445.t1 AT4G30560 40.886 587 296 13 184 741 103 667 1.54e-126 395
MS.gene40445.t1 AT2G23980 39.759 581 311 12 184 741 76 640 7.51e-125 390
MS.gene40445.t1 AT2G23980 39.759 581 311 12 184 741 103 667 2.02e-124 389
MS.gene40445.t1 AT2G23980 39.759 581 311 12 184 741 103 667 2.02e-124 389
MS.gene40445.t1 AT2G23980 39.759 581 311 12 184 741 103 667 2.02e-124 389
MS.gene40445.t1 AT2G23980 39.759 581 311 12 184 741 103 667 2.02e-124 389
MS.gene40445.t1 AT2G23980 39.759 581 311 12 184 741 103 667 2.02e-124 389
MS.gene40445.t1 AT5G57940 39.310 580 314 13 184 741 81 644 7.57e-124 387
MS.gene40445.t1 AT5G57940 39.310 580 314 13 184 741 88 651 8.15e-124 387
MS.gene40445.t1 AT5G57940 39.310 580 314 13 184 741 88 651 8.15e-124 387
MS.gene40445.t1 AT2G23980 38.411 604 310 13 184 741 103 690 2.86e-119 377
MS.gene40445.t1 AT2G23980 38.411 604 310 13 184 741 103 690 2.86e-119 377
MS.gene40445.t1 AT2G23980 38.411 604 310 13 184 741 103 690 2.86e-119 377
MS.gene40445.t1 AT2G23980 38.411 604 310 13 184 741 103 690 2.86e-119 377
MS.gene40445.t1 AT5G14870 35.910 621 351 14 147 741 3 602 1.67e-118 373
MS.gene40445.t1 AT2G46430 37.268 593 331 15 184 751 72 648 1.42e-117 370
MS.gene40445.t1 AT2G46430 37.268 593 331 15 184 751 72 648 1.42e-117 370
MS.gene40445.t1 AT3G48010 35.922 618 351 16 151 743 16 613 1.25e-116 368
MS.gene40445.t1 AT5G15410 36.505 578 328 10 184 735 113 677 1.18e-99 324
MS.gene40445.t1 AT5G15410 36.505 578 328 10 184 735 112 676 1.55e-99 323
MS.gene40445.t1 AT5G54250 33.333 588 348 15 184 743 79 650 6.25e-99 321
MS.gene40445.t1 AT5G54250 33.333 588 348 15 184 743 79 650 6.25e-99 321
MS.gene40445.t1 AT5G54250 33.333 588 348 15 184 743 79 650 6.25e-99 321
MS.gene40445.t1 AT5G54250 33.049 587 346 15 184 743 79 645 1.64e-96 314
MS.gene40445.t1 AT1G19780 40.821 463 239 13 300 741 2 450 1.43e-95 308
MS.gene40445.t1 AT2G46450 31.749 589 343 16 190 750 35 592 1.33e-88 292
MS.gene40445.t1 AT2G46450 31.749 589 343 16 190 750 35 592 1.33e-88 292
MS.gene40445.t1 AT2G46440 32.441 598 342 16 190 751 35 606 3.76e-87 288
MS.gene40445.t1 AT2G46450 31.409 589 322 18 190 750 22 556 1.91e-80 270
MS.gene40445.t1 AT2G46450 31.409 589 322 18 190 750 35 569 2.04e-80 270
MS.gene40445.t1 AT2G46440 34.932 438 228 14 349 751 13 428 2.59e-60 210

Find 170 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTCCACAATTCTCTTTA+TGG 0.076169 6.2:+75752393 MS.gene40445:intron
TTCTGCTCTTCATGGATTCC+TGG 0.225119 6.2:+75752450 MS.gene40445:CDS
AATATGTGTATGCACTCTTT+TGG 0.256005 6.2:+75754360 MS.gene40445:CDS
CACTTGCAGCAAACAGAATT+CGG 0.265972 6.2:+75757404 MS.gene40445:CDS
GTTTATTGTGCGTGGAAAAT+TGG 0.274539 6.2:+75756504 MS.gene40445:CDS
TTCCATTCCTATGGCTTCTC+TGG 0.284126 6.2:+75751755 MS.gene40445:CDS
ATGTCTGTCTGCAGATCTTC+TGG 0.294191 6.2:-75756014 None:intergenic
GGTTCATGCTGGTACCTCTT+TGG 0.298958 6.2:+75753563 MS.gene40445:CDS
GAGTCAAGGGTTGTTGGTGC+TGG 0.301405 6.2:+75753043 MS.gene40445:CDS
TGAAAAGGATTTCCAGTTGC+AGG 0.328009 6.2:-75751879 None:intergenic
TGAACAATCTGGGAATATAT+TGG 0.331276 6.2:-75753430 None:intergenic
GCTTACCAGAAGATCTTAAA+AGG 0.333332 6.2:+75755802 MS.gene40445:CDS
AAGGGGTGTTCCTGAGAAAA+TGG 0.334550 6.2:+75755977 MS.gene40445:CDS
ATACAGACGACATACATTAA+AGG 0.335319 6.2:+75756439 MS.gene40445:CDS
TCCTAGACGTAGAAGATTCT+TGG 0.335613 6.2:-75753399 None:intergenic
CAAAACTTTCTTCAGGCTCT+TGG 0.335864 6.2:+75755486 MS.gene40445:CDS
GGACCACTCATTTGGCTAAC+AGG 0.342078 6.2:-75751843 None:intergenic
ACAACAATGGAACAAGGTTT+TGG 0.354062 6.2:+75752500 MS.gene40445:CDS
CTGGTACCTCTTTGGCCTAC+AGG 0.356505 6.2:+75753571 MS.gene40445:CDS
AATTGCGACCAAGCAAAATA+TGG 0.356880 6.2:-75752523 None:intergenic
ATGCTATCCGGCCATGTTGT+TGG 0.360446 6.2:+75753542 MS.gene40445:CDS
TTAGGTATGAATCACCTTAC+TGG 0.364609 6.2:+75757377 MS.gene40445:intron
TATGGCGACGCCAAAGGTTA+TGG 0.367154 6.2:+75752411 MS.gene40445:CDS
TTTATCCTACCAAGTTCCTT+GGG 0.382855 6.2:+75753356 MS.gene40445:CDS
CCAAGTTCCTTGGGGTCATC+AGG 0.385649 6.2:+75753365 MS.gene40445:CDS
CGATGCATGGATCCAGGATC+AGG 0.389399 6.2:+75754241 MS.gene40445:CDS
CTCTTTACAATGTCCATCAT+AGG 0.393451 6.2:+75755423 MS.gene40445:CDS
AAACATACAAAACTTTCTTC+AGG 0.393913 6.2:+75755479 MS.gene40445:CDS
CATATAATGGACCACTCATT+TGG 0.395071 6.2:-75751851 None:intergenic
TGAAGAATTCAAACAATCAT+TGG 0.398668 6.2:-75754267 None:intergenic
AGTCAAGGGTTGTTGGTGCT+GGG 0.402836 6.2:+75753044 MS.gene40445:CDS
ATTTATCCTACCAAGTTCCT+TGG 0.403214 6.2:+75753355 MS.gene40445:CDS
TGCTTCAATTTCCATTCCTA+TGG 0.403389 6.2:+75751746 MS.gene40445:CDS
TAGGTTCATCTTCAGCCATC+AGG 0.404109 6.2:-75756390 None:intergenic
GAGGGTTAACCAATGTTTGC+GGG 0.406787 6.2:+75754160 MS.gene40445:intron
TTATATGCTTCTCCTGCAAC+TGG 0.411022 6.2:+75751867 MS.gene40445:CDS
TTGCGGAGCCCTCGTGTTCA+AGG 0.418034 6.2:+75756856 MS.gene40445:CDS
CCGGTATGTCCGACAAGATT+CGG 0.418379 6.2:-75751795 None:intergenic
CGTCGGAGAGGATGGAATTC+CGG 0.422155 6.2:+75756531 MS.gene40445:CDS
TACAATGTCCATCATAGGAT+TGG 0.422433 6.2:+75755428 MS.gene40445:CDS
TCACGAATGGCGTCTAAGAT+AGG 0.425724 6.2:-75756409 None:intergenic
TGTTGTATCACCTCTTCCTC+AGG 0.425740 6.2:+75753135 MS.gene40445:CDS
ATCTGGGAATATATTGGATA+AGG 0.426709 6.2:-75753424 None:intergenic
AGGAAGTAAAATTCTCAGTC+AGG 0.426764 6.2:+75756459 MS.gene40445:CDS
GATTGTTTGAATTCTTCATC+TGG 0.430611 6.2:+75754272 MS.gene40445:CDS
AATCATTGGAGCCCTGATCC+TGG 0.432839 6.2:-75754253 None:intergenic
TCTCCTGAGTCAAGGGTTGT+TGG 0.433479 6.2:+75753037 MS.gene40445:CDS
CTGAGCAACTTTGAAGTAAG+TGG 0.434954 6.2:-75752045 None:intergenic
TTCGGGTTGCATGGAGATAT+AGG 0.440590 6.2:+75757422 MS.gene40445:CDS
ACTATTATATTATTCTGAAA+AGG 0.441915 6.2:-75751894 None:intergenic
GTTGCAGGAGAAGCATATAA+TGG 0.448760 6.2:-75751864 None:intergenic
GATTCATATTCGAGTCAGCC+TGG 0.449287 6.2:+75753489 MS.gene40445:CDS
CCTGATGACCCCAAGGAACT+TGG 0.451927 6.2:-75753365 None:intergenic
TCAAATATAGTGGGAGCTCT+TGG 0.453330 6.2:-75752077 None:intergenic
TACCTTGGGATCAAATATAG+TGG 0.457381 6.2:-75752087 None:intergenic
ACAATGTCCATCATAGGATT+GGG 0.458826 6.2:+75755429 MS.gene40445:CDS
CAGAATAATATAATAGTGGC+AGG 0.459304 6.2:+75751900 MS.gene40445:CDS
TCCCCTTCTGATAACGGAAC+CGG 0.459445 6.2:-75756550 None:intergenic
GTGGGACAAGTAGTACAATA+AGG 0.459611 6.2:-75752026 None:intergenic
AATGAACACTTGTTAAGGTC+TGG 0.463846 6.2:+75751981 MS.gene40445:CDS
GTCAGGCTGAACGGTATAGT+TGG 0.464869 6.2:+75755946 MS.gene40445:CDS
CTTATGTTTCTCCTGAGTCA+AGG 0.468126 6.2:+75753029 MS.gene40445:CDS
CTTCTTACTCTATGTGGAGA+AGG 0.474707 6.2:+75752566 MS.gene40445:CDS
TTATGTTTCTCCTGAGTCAA+GGG 0.478763 6.2:+75753030 MS.gene40445:CDS
TTGGAGAGCGTCGGAGAGGA+TGG 0.482934 6.2:+75756523 MS.gene40445:CDS
GCATCTTACTGTTCTGTCGC+TGG 0.483479 6.2:-75756761 None:intergenic
CCACGTGTTTCTGACAGAAT+CGG 0.483690 6.2:-75751663 None:intergenic
TCTCTTGAACATTCTTCTCC+AGG 0.489405 6.2:+75752780 MS.gene40445:CDS
AAAATAAAACTTCACGGCCA+GGG 0.496417 6.2:+75756733 MS.gene40445:CDS
CTAATTGGTCAGTCTCCAAC+CGG 0.500012 6.2:+75753467 MS.gene40445:CDS
TATTAACAAATTTGAAGAGA+TGG 0.501093 6.2:-75756043 None:intergenic
GCCATGTTGTTGGTTCATGC+TGG 0.504222 6.2:+75753552 MS.gene40445:CDS
CCTTCAGAAGAAACATTTCG+AGG 0.504344 6.2:+75751715 MS.gene40445:CDS
GTCATGCAGGAGAGTACGTC+AGG 0.504709 6.2:+75755929 MS.gene40445:intron
ATAGTGGCAGGAAACAAAGT+AGG 0.505404 6.2:+75751912 MS.gene40445:CDS
GTATAGTTGGGCTGCAACAA+GGG 0.505727 6.2:+75755959 MS.gene40445:CDS
CAAGCATCCCCTTCTGATAA+CGG 0.505912 6.2:-75756556 None:intergenic
CCTCGAAATGTTTCTTCTGA+AGG 0.507653 6.2:-75751715 None:intergenic
ATTTATAATGAAATTTGCCC+AGG 0.509046 6.2:-75753507 None:intergenic
AAGATATATACCTGAGGAAG+AGG 0.510516 6.2:-75753145 None:intergenic
GCGTGAGGATTCATAACTCC+AGG 0.511604 6.2:-75752468 None:intergenic
TTCTGTCGCTGGTCAAACCC+TGG 0.513637 6.2:-75756750 None:intergenic
GGCTGACTCGAATATGAATC+CGG 0.516192 6.2:-75753486 None:intergenic
CCGAATCTTGTCGGACATAC+CGG 0.517871 6.2:+75751795 MS.gene40445:CDS
TTATAACGATGCATGGATCC+AGG 0.520942 6.2:+75754235 MS.gene40445:CDS
ACTTGCAGCAAACAGAATTC+GGG 0.521184 6.2:+75757405 MS.gene40445:CDS
TCCCACTATATTTGATCCCA+AGG 0.522705 6.2:+75752085 MS.gene40445:CDS
TCAGGCTGAACGGTATAGTT+GGG 0.522851 6.2:+75755947 MS.gene40445:CDS
GTCAAGGGTTGTTGGTGCTG+GGG 0.527130 6.2:+75753045 MS.gene40445:CDS
ATTGTCATTATAACGATGCA+TGG 0.527459 6.2:+75754228 MS.gene40445:CDS
TTGTTAAGGTCTGGACAACT+AGG 0.527946 6.2:+75751990 MS.gene40445:CDS
GCAGCGTTATAAATTCCATA+AGG 0.528890 6.2:-75754302 None:intergenic
CAAACAGAATTCGGGTTGCA+TGG 0.530459 6.2:+75757413 MS.gene40445:CDS
ACCCTAGTTTCTATCGTAAG+TGG 0.530830 6.2:-75754329 None:intergenic
GGTATAGTTGGGCTGCAACA+AGG 0.533253 6.2:+75755958 MS.gene40445:CDS
CCTCGTGGTACGAAGCGGAC+CGG 0.533441 6.2:-75751814 None:intergenic
CTCGTGTTCAAGGAGTTATA+AGG 0.533997 6.2:+75756866 MS.gene40445:CDS
AGAGGGTTAACCAATGTTTG+CGG 0.537367 6.2:+75754159 MS.gene40445:intron
CAAGAGTCCCAATCCTATGA+TGG 0.538094 6.2:-75755436 None:intergenic
CAGCAAATCAGTACTCTGGC+TGG 0.539258 6.2:+75755366 MS.gene40445:intron
AGATTCGGTTGCCTCTCGTA+TGG 0.545158 6.2:-75751780 None:intergenic
GGGTGGTCTTGTACAGAAGA+TGG 0.547676 6.2:+75756480 MS.gene40445:CDS
GGCAGGCATCCCGCAAACAT+TGG 0.547918 6.2:-75754169 None:intergenic
TACTCACCTGTAGGCCAAAG+AGG 0.550263 6.2:-75753577 None:intergenic
GACTCGAATATGAATCCGGT+TGG 0.550956 6.2:-75753482 None:intergenic
TCTCTTTATGGCGACGCCAA+AGG 0.552052 6.2:+75752405 MS.gene40445:CDS
TACCACTTACGATAGAAACT+AGG 0.552629 6.2:+75754327 MS.gene40445:CDS
TCCGGTTCCGTTATCAGAAG+GGG 0.560727 6.2:+75756549 MS.gene40445:CDS
ATTCCGGTTCCGTTATCAGA+AGG 0.567052 6.2:+75756547 MS.gene40445:CDS
ACTTCCCACACAAAATAGCT+TGG 0.569266 6.2:-75755399 None:intergenic
GAGAGGCAACCGAATCTTGT+CGG 0.569348 6.2:+75751786 MS.gene40445:CDS
TTATCAAACATTGATGCCAT+AGG 0.570396 6.2:+75757483 MS.gene40445:CDS
GCCAAGAATCTTCTACGTCT+AGG 0.570401 6.2:+75753398 MS.gene40445:CDS
ACTTTCTTCAGGCTCTTGGA+CGG 0.572535 6.2:+75755490 MS.gene40445:CDS
TAGTGGCAGGAAACAAAGTA+GGG 0.572650 6.2:+75751913 MS.gene40445:CDS
GGAAGTAAAATTCTCAGTCA+GGG 0.572657 6.2:+75756460 MS.gene40445:CDS
CTTCTGAAGGTAGAATCTTG+AGG 0.578165 6.2:-75751702 None:intergenic
GCACCAACAACCCTTGACTC+AGG 0.578857 6.2:-75753040 None:intergenic
GCTGCAAGTGATCTCCAGTA+AGG 0.578938 6.2:-75757391 None:intergenic
CTTCTTCAATGTCTTTAGCA+CGG 0.579605 6.2:-75756810 None:intergenic
CTGTATTAGTCTCTCACGAA+TGG 0.579807 6.2:-75756422 None:intergenic
AGGTTCATCTTCAGCCATCA+GGG 0.581034 6.2:-75756389 None:intergenic
AATACAGCAAATCAGTACTC+TGG 0.582109 6.2:+75755362 MS.gene40445:intron
AGTTAGATTAGTACGATGGC+AGG 0.586447 6.2:-75754186 None:intergenic
TTCTTCAGGCTCTTGGACGG+AGG 0.589094 6.2:+75755493 MS.gene40445:CDS
TGTTGTACAACTTTCGCGTG+AGG 0.589116 6.2:-75752483 None:intergenic
ATTCATATTCGAGTCAGCCT+GGG 0.590159 6.2:+75753490 MS.gene40445:CDS
GCATGAACCAACAACATGGC+CGG 0.590290 6.2:-75753549 None:intergenic
GGAGAGTACGTCAGGCTGAA+CGG 0.591154 6.2:+75755937 MS.gene40445:intron
GTGGTGAAGAACTTCTAAGA+TGG 0.591370 6.2:+75756578 MS.gene40445:CDS
GATCTTCTGGTAAGCGACGA+TGG 0.594933 6.2:-75755794 None:intergenic
ACCTTGGGATCAAATATAGT+GGG 0.595230 6.2:-75752086 None:intergenic
CGTCGCCATAAAGAGAATTG+TGG 0.595293 6.2:-75752398 None:intergenic
ATCCAGAGAAGCCATAGGAA+TGG 0.596327 6.2:-75751757 None:intergenic
TGAGCAACTTTGAAGTAAGT+GGG 0.601206 6.2:-75752044 None:intergenic
ACCACTTACGATAGAAACTA+GGG 0.602596 6.2:+75754328 MS.gene40445:CDS
TTCCGGTTCCGTTATCAGAA+GGG 0.604864 6.2:+75756548 MS.gene40445:CDS
GAAGAAACATTTCGAGGACA+CGG 0.606041 6.2:+75751721 MS.gene40445:CDS
AAGATGGTGTTTATTGTGCG+TGG 0.607353 6.2:+75756496 MS.gene40445:CDS
CAAGTGTTGTTGCCATTGCG+TGG 0.607532 6.2:-75752726 None:intergenic
AGGGTAGAAATGCAACTTAG+AGG 0.611605 6.2:+75755747 MS.gene40445:CDS
ACGCGAAAGTTGTACAACAA+TGG 0.616709 6.2:+75752487 MS.gene40445:CDS
GATGCATGGATCCAGGATCA+GGG 0.616800 6.2:+75754242 MS.gene40445:CDS
TATAGTTGGGCTGCAACAAG+GGG 0.617263 6.2:+75755960 MS.gene40445:CDS
CTTATAACTCCTTGAACACG+AGG 0.618090 6.2:-75756865 None:intergenic
CGTGGAAAATTGGAGAGCGT+CGG 0.618147 6.2:+75756514 MS.gene40445:CDS
TATTCGAATCAACCACGCAA+TGG 0.622474 6.2:+75752714 MS.gene40445:CDS
TTATCAGAAGGGGATGCTTG+TGG 0.631551 6.2:+75756559 MS.gene40445:CDS
ATGACCCCAAGGAACTTGGT+AGG 0.631622 6.2:-75753361 None:intergenic
TATGGATCCAGAGAAGCCAT+AGG 0.636832 6.2:-75751762 None:intergenic
TTATCCTACCAAGTTCCTTG+GGG 0.643481 6.2:+75753357 MS.gene40445:CDS
AGTTGTACAACAATGGAACA+AGG 0.646393 6.2:+75752494 MS.gene40445:CDS
AGTAAGATGCTTAACCAATG+TGG 0.646548 6.2:+75756774 MS.gene40445:CDS
ACCAGCATGAACCAACAACA+TGG 0.650102 6.2:-75753553 None:intergenic
ATTTGCTCCTGATGACCCCA+AGG 0.652468 6.2:-75753372 None:intergenic
GAACAGTCTTCTGAAAACAA+AGG 0.654327 6.2:+75756607 MS.gene40445:CDS
GAGTGAAAATGCCTCCACAT+TGG 0.657412 6.2:-75756788 None:intergenic
AAGATGCTTAACCAATGTGG+AGG 0.669911 6.2:+75756777 MS.gene40445:CDS
GAGGTCGTGATGTTGAGCAA+TGG 0.676062 6.2:+75755766 MS.gene40445:CDS
AAAATTGGAGAGCGTCGGAG+AGG 0.681877 6.2:+75756519 MS.gene40445:CDS
ATGCAGTTAGATTAGTACGA+TGG 0.682323 6.2:-75754190 None:intergenic
GGAGACTGACCAATTAGCAG+AGG 0.684915 6.2:-75753461 None:intergenic
CCGATTCTGTCAGAAACACG+TGG 0.688656 6.2:+75751663 MS.gene40445:CDS
ACTCCTGTTAGCCAAATGAG+TGG 0.689485 6.2:+75751840 MS.gene40445:CDS
AGTAAAATTCTCAGTCAGGG+TGG 0.692049 6.2:+75756463 MS.gene40445:CDS
CTTCTCTGGATCCATACGAG+AGG 0.705333 6.2:+75751769 MS.gene40445:CDS
CCGGTCCGCTTCGTACCACG+AGG 0.716834 6.2:+75751814 MS.gene40445:CDS
AGTGGCAGGAAACAAAGTAG+GGG 0.735493 6.2:+75751914 MS.gene40445:CDS
ACTTACGATAGAAACTAGGG+TGG 0.738390 6.2:+75754331 MS.gene40445:CDS
TTATAACTCCTTGAACACGA+GGG 0.753036 6.2:-75756864 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATATTTGAAAATAATT+TGG + chr6.2:75754896-75754915 MS.gene40445:intron 10.0%
!!! AATTTGATTTAAAACATTAT+AGG - chr6.2:75756157-75756176 None:intergenic 10.0%
!! AAATAAAAGTCTATTACTTT+AGG - chr6.2:75752121-75752140 None:intergenic 15.0%
!! ACAAGAAAATTCAAATAATT+TGG + chr6.2:75754699-75754718 MS.gene40445:intron 15.0%
!! ATTAAGCATACTATTTATTA+AGG - chr6.2:75753223-75753242 None:intergenic 15.0%
!!! ACTATTATATTATTCTGAAA+AGG - chr6.2:75751897-75751916 None:intergenic 15.0%
!!! GTTATCATTTTATTAAGTAT+AGG - chr6.2:75756637-75756656 None:intergenic 15.0%
!!! TATCAAGATTTTAAAATGAA+AGG - chr6.2:75755702-75755721 None:intergenic 15.0%
!!! TCAAACTTGTTTAATATAAT+TGG - chr6.2:75756303-75756322 None:intergenic 15.0%
!!! TTTGAAAATAATTTGGATTT+TGG + chr6.2:75754903-75754922 MS.gene40445:intron 15.0%
!!! TTTTCAGAATAATATAATAG+TGG + chr6.2:75751896-75751915 MS.gene40445:CDS 15.0%
!! AAAATGGTATAAATGTGATT+TGG - chr6.2:75755185-75755204 None:intergenic 20.0%
!! AAACGCATCTATTTAAATAA+TGG + chr6.2:75755870-75755889 MS.gene40445:intron 20.0%
!! AAAGTAATGTAAAATGATGA+TGG - chr6.2:75752628-75752647 None:intergenic 20.0%
!! ATATCTTATCTCATCAAATA+TGG + chr6.2:75757242-75757261 MS.gene40445:intron 20.0%
!! ATTCTATCAATAGATGTTTA+AGG - chr6.2:75752813-75752832 None:intergenic 20.0%
!! ATTTCAACATTTGAAAATCA+TGG + chr6.2:75754950-75754969 MS.gene40445:intron 20.0%
!! GGTAAAAAAATAAAACTTCA+CGG + chr6.2:75756727-75756746 MS.gene40445:CDS 20.0%
!! GTATATTTGAACAAAAATTG+TGG + chr6.2:75754861-75754880 MS.gene40445:intron 20.0%
!! TAAACAGAAGTTAATTTAGA+AGG - chr6.2:75755674-75755693 None:intergenic 20.0%
!! TAAAGATCAATGTGTATAAT+TGG - chr6.2:75755343-75755362 None:intergenic 20.0%
!! TAACTTAACCATTAAAAAAC+CGG + chr6.2:75757184-75757203 MS.gene40445:intron 20.0%
!! TAATTCAGTAAATGAATGTT+GGG + chr6.2:75754091-75754110 MS.gene40445:intron 20.0%
!! TAGAAACATTTACATTCAAA+TGG - chr6.2:75752842-75752861 None:intergenic 20.0%
!! TAGAGTAAGAAGAAAAATAA+CGG - chr6.2:75752558-75752577 None:intergenic 20.0%
!! TATCTTATCTCATCAAATAT+GGG + chr6.2:75757243-75757262 MS.gene40445:intron 20.0%
!! TATTAACAAATTTGAAGAGA+TGG - chr6.2:75756046-75756065 None:intergenic 20.0%
!! TGAAGATAAACAATGTAAAT+TGG + chr6.2:75754557-75754576 MS.gene40445:intron 20.0%
!! TGAGATAAGATATGAAAATA+TGG - chr6.2:75757235-75757254 None:intergenic 20.0%
!! TTAATTCAGTAAATGAATGT+TGG + chr6.2:75754090-75754109 MS.gene40445:intron 20.0%
!! TTGAATAAACAACTTGATTA+GGG - chr6.2:75753963-75753982 None:intergenic 20.0%
!! TTTAATGCTTCTGATTAATA+AGG + chr6.2:75753737-75753756 MS.gene40445:intron 20.0%
!! TTTATGTTTACGTTAATTGT+TGG + chr6.2:75755535-75755554 MS.gene40445:intron 20.0%
!! TTTGAATAAACAACTTGATT+AGG - chr6.2:75753964-75753983 None:intergenic 20.0%
!!! AAAATAATTTGGATTTTGGA+TGG + chr6.2:75754907-75754926 MS.gene40445:intron 20.0%
!!! ATAAAAATGAACACTTGTTA+AGG + chr6.2:75751976-75751995 MS.gene40445:CDS 20.0%
!!! TAATTAACAGCTATTTTCTT+GGG - chr6.2:75753085-75753104 None:intergenic 20.0%
!!! TTAAGTCGATTTTATTTATC+TGG + chr6.2:75756101-75756120 MS.gene40445:intron 20.0%
!!! TTGAATGCTTTAAATAAGAA+TGG + chr6.2:75754048-75754067 MS.gene40445:intron 20.0%
!!! TTGAATGTAAATGTTTCTAA+TGG + chr6.2:75752843-75752862 MS.gene40445:intron 20.0%
! AAACAAGGTTTAAAAGTAAG+AGG + chr6.2:75754652-75754671 MS.gene40445:intron 25.0%
! AAACATACAAAACTTTCTTC+AGG + chr6.2:75755479-75755498 MS.gene40445:CDS 25.0%
! AAATATACATCTGAACATTG+TGG - chr6.2:75754849-75754868 None:intergenic 25.0%
! AAATGCAGTTGAATCATAAA+AGG - chr6.2:75756956-75756975 None:intergenic 25.0%
! AATGCAGTTGAATCATAAAA+GGG - chr6.2:75756955-75756974 None:intergenic 25.0%
! AATTTGTATAGTTACAACTG+AGG - chr6.2:75754422-75754441 None:intergenic 25.0%
! ACATGTAAATAGCATACTTT+AGG - chr6.2:75757300-75757319 None:intergenic 25.0%
! AGAATGTGTTTATAAGTGAT+GGG - chr6.2:75757042-75757061 None:intergenic 25.0%
! ATTTATAATGAAATTTGCCC+AGG - chr6.2:75753510-75753529 None:intergenic 25.0%
! ATTTGTATAGTTACAACTGA+GGG - chr6.2:75754421-75754440 None:intergenic 25.0%
! GATGGTTAATGAATTTAACA+AGG - chr6.2:75755031-75755050 None:intergenic 25.0%
! TAAACTGCAAAAAAGGAAAT+TGG - chr6.2:75753003-75753022 None:intergenic 25.0%
! TACATATAATGTACAACTGA+TGG + chr6.2:75755895-75755914 MS.gene40445:intron 25.0%
! TATTCTCAGCTCAATATTAT+AGG - chr6.2:75754449-75754468 None:intergenic 25.0%
! TGAAGAATTCAAACAATCAT+TGG - chr6.2:75754270-75754289 None:intergenic 25.0%
! TGCAACATATTATCATACTA+TGG - chr6.2:75753992-75754011 None:intergenic 25.0%
! TGCATATGAAAATTAAAACG+AGG - chr6.2:75755156-75755175 None:intergenic 25.0%
! TTAACGATATGTATTTGACA+TGG + chr6.2:75753254-75753273 MS.gene40445:intron 25.0%
! TTTAACACAGTTCAAATACA+TGG + chr6.2:75754725-75754744 MS.gene40445:intron 25.0%
! TTTATGATTCAACTGCATTT+CGG + chr6.2:75756956-75756975 MS.gene40445:intron 25.0%
!! ATCAAGTTGTTTATTCAAAC+AGG + chr6.2:75753965-75753984 MS.gene40445:intron 25.0%
!! ATTTCCTTTTACATAAAAGG+AGG - chr6.2:75755108-75755127 None:intergenic 25.0%
!! ATTTTTCTTCTTACTCTATG+TGG + chr6.2:75752560-75752579 MS.gene40445:CDS 25.0%
!! CCTATTTCCTTTTACATAAA+AGG - chr6.2:75755111-75755130 None:intergenic 25.0%
!! CCTTTTATGTAAAAGGAAAT+AGG + chr6.2:75755108-75755127 MS.gene40445:intron 25.0%
!! GAAAAGTTTTCTACATTTGA+TGG + chr6.2:75751948-75751967 MS.gene40445:CDS 25.0%
!! GATTTTGAACGAATCATTTT+TGG + chr6.2:75755607-75755626 MS.gene40445:intron 25.0%
!! TCAAGTTGTTTATTCAAACA+GGG + chr6.2:75753966-75753985 MS.gene40445:intron 25.0%
!! TTTTCCTCCTTTTATGTAAA+AGG + chr6.2:75755101-75755120 MS.gene40445:intron 25.0%
!! TTTTCTCATTCAACTTCTAT+TGG - chr6.2:75756217-75756236 None:intergenic 25.0%
!!! AATTTCCTTTTTTGCAGTTT+AGG + chr6.2:75753002-75753021 MS.gene40445:intron 25.0%
!!! AGCTTTACTTTTGTTTTCAA+TGG + chr6.2:75752259-75752278 MS.gene40445:intron 25.0%
!!! GGTTTTTTAATGGTTAAGTT+AGG - chr6.2:75757185-75757204 None:intergenic 25.0%
!!! GTAATTAACAGCTATTTTCT+TGG - chr6.2:75753086-75753105 None:intergenic 25.0%
!!! GTTAAGCTGTTTATTTTCAT+TGG - chr6.2:75754499-75754518 None:intergenic 25.0%
!!! TAATGTAAAATGATGATGGA+AGG - chr6.2:75752624-75752643 None:intergenic 25.0%
!!! TGTGTTATTTTGACACAAAA+TGG + chr6.2:75754675-75754694 MS.gene40445:intron 25.0%
!!! TGTTTGATAATCATTTTGAG+TGG - chr6.2:75757473-75757492 None:intergenic 25.0%
AAATCATTATGTCAGAGACA+TGG - chr6.2:75757342-75757361 None:intergenic 30.0%
AAGGAGGAAAACAATTTGAT+TGG - chr6.2:75755092-75755111 None:intergenic 30.0%
ATACAGACGACATACATTAA+AGG + chr6.2:75756439-75756458 MS.gene40445:CDS 30.0%
ATCTGGGAATATATTGGATA+AGG - chr6.2:75753427-75753446 None:intergenic 30.0%
ATGTATGTAATTACGTTCAG+TGG - chr6.2:75755053-75755072 None:intergenic 30.0%
ATGTCTCTGACATAATGATT+TGG + chr6.2:75757341-75757360 MS.gene40445:intron 30.0%
ATTCATTATGTGAAGATGCA+GGG - chr6.2:75753691-75753710 None:intergenic 30.0%
ATTGGATTCCAATAACTTAC+AGG - chr6.2:75756199-75756218 None:intergenic 30.0%
ATTGGGAAAAATCTAAGTCA+AGG - chr6.2:75757069-75757088 None:intergenic 30.0%
ATTGTCATTATAACGATGCA+TGG + chr6.2:75754228-75754247 MS.gene40445:CDS 30.0%
CAAAACATGTTTAATCGATG+TGG + chr6.2:75756690-75756709 MS.gene40445:intron 30.0%
CAGAATAATATAATAGTGGC+AGG + chr6.2:75751900-75751919 MS.gene40445:CDS 30.0%
CGTTAATTGTATTATGTGCA+TGG - chr6.2:75754806-75754825 None:intergenic 30.0%
CTGATTAATAAGGTTACATC+AGG + chr6.2:75753747-75753766 MS.gene40445:intron 30.0%
GAGAATGTGTTTATAAGTGA+TGG - chr6.2:75757043-75757062 None:intergenic 30.0%
GATGTTTAAGGAAAATTACC+TGG - chr6.2:75752801-75752820 None:intergenic 30.0%
GATTGTTTGAATTCTTCATC+TGG + chr6.2:75754272-75754291 MS.gene40445:CDS 30.0%
GCACAACTATATGACAAAAA+AGG - chr6.2:75752305-75752324 None:intergenic 30.0%
GTATTTGACATGGAAGAAAA+GGG + chr6.2:75753264-75753283 MS.gene40445:intron 30.0%
GTTCTTTGTATTTGAATGCA+AGG - chr6.2:75753669-75753688 None:intergenic 30.0%
GTTGTCTAATATCATGTCAA+GGG + chr6.2:75755268-75755287 MS.gene40445:intron 30.0%
TAAATTGCAAAATGCATACC+TGG - chr6.2:75754391-75754410 None:intergenic 30.0%
TAACTTGAATCAACGCTAAA+AGG + chr6.2:75755292-75755311 MS.gene40445:intron 30.0%
TAGTAGTTAATAACGTTGAG+TGG + chr6.2:75754989-75755008 MS.gene40445:intron 30.0%
TATAAAAAAAGGGGAAGACA+AGG + chr6.2:75755217-75755236 MS.gene40445:intron 30.0%
TCAAATAAGTCTAACCAAAC+AGG - chr6.2:75753773-75753792 None:intergenic 30.0%
TCATAAGTCATAACCAGTTA+TGG + chr6.2:75754616-75754635 MS.gene40445:intron 30.0%
TGAACAATCTGGGAATATAT+TGG - chr6.2:75753433-75753452 None:intergenic 30.0%
TGATGATCTAACATTTCTAC+AGG + chr6.2:75756354-75756373 MS.gene40445:intron 30.0%
TGTATTTGACATGGAAGAAA+AGG + chr6.2:75753263-75753282 MS.gene40445:intron 30.0%
TGTGTCTTGAATCTTAAACA+TGG + chr6.2:75752919-75752938 MS.gene40445:intron 30.0%
TGTTGTCTAATATCATGTCA+AGG + chr6.2:75755267-75755286 MS.gene40445:intron 30.0%
TTAACGAATGACATCAACAT+TGG + chr6.2:75755845-75755864 MS.gene40445:intron 30.0%
TTTAGGAAGAAAGATACCTT+GGG - chr6.2:75752104-75752123 None:intergenic 30.0%
TTTCTTCCAATAAGCAAAGA+GGG - chr6.2:75752892-75752911 None:intergenic 30.0%
TTTGGTTGTTGTGTTATGTT+AGG + chr6.2:75757359-75757378 MS.gene40445:intron 30.0%
! AAGTTTTCTTCCATAACCTT+TGG - chr6.2:75752424-75752443 None:intergenic 30.0%
! AATATGTGTATGCACTCTTT+TGG + chr6.2:75754360-75754379 MS.gene40445:CDS 30.0%
! ACCATCTTAGAATTTGAGTT+AGG + chr6.2:75757159-75757178 MS.gene40445:intron 30.0%
! ATATGTGTATGCACTCTTTT+GGG + chr6.2:75754361-75754380 MS.gene40445:CDS 30.0%
! ATTATTTCTCTTCTTCCAGA+GGG + chr6.2:75754142-75754161 MS.gene40445:intron 30.0%
! CATTTTTATTACTCACCTGT+AGG - chr6.2:75753589-75753608 None:intergenic 30.0%
! CTTCTGATTTTTATGCTATC+CGG + chr6.2:75753530-75753549 MS.gene40445:CDS 30.0%
! GGTTAAAAACGTTTTGTAGA+TGG + chr6.2:75754746-75754765 MS.gene40445:intron 30.0%
! TATTATTTCTCTTCTTCCAG+AGG + chr6.2:75754141-75754160 MS.gene40445:intron 30.0%
! TTTTCTTCCAATAAGCAAAG+AGG - chr6.2:75752893-75752912 None:intergenic 30.0%
!! AAGCTGTTTATTTTCATTGG+AGG - chr6.2:75754496-75754515 None:intergenic 30.0%
!! CATCGATTAAACATGTTTTG+AGG - chr6.2:75756690-75756709 None:intergenic 30.0%
!!! ATGTTTTGAGGTACTGATTA+TGG - chr6.2:75756678-75756697 None:intergenic 30.0%
!!! TCATACCTTTTAAGATCTTC+TGG - chr6.2:75755810-75755829 None:intergenic 30.0%
!!! TTTTTTCTTTCTGCTCTTCA+TGG + chr6.2:75752442-75752461 MS.gene40445:CDS 30.0%
AAAAATAAAACTTCACGGCC+AGG + chr6.2:75756732-75756751 MS.gene40445:CDS 35.0%
AAAATAAAACTTCACGGCCA+GGG + chr6.2:75756733-75756752 MS.gene40445:CDS 35.0%
AACAAACAACATGGAGAGAT+AGG - chr6.2:75753171-75753190 None:intergenic 35.0%
AACGCTAAAAGGCAAATGAA+TGG + chr6.2:75755303-75755322 MS.gene40445:intron 35.0%
AAGATATATACCTGAGGAAG+AGG - chr6.2:75753148-75753167 None:intergenic 35.0%
AATACAGCAAATCAGTACTC+TGG + chr6.2:75755362-75755381 MS.gene40445:intron 35.0%
AATAGGCTCAAAACAACTGA+TGG - chr6.2:75753855-75753874 None:intergenic 35.0%
AATTGCGACCAAGCAAAATA+TGG - chr6.2:75752526-75752545 None:intergenic 35.0%
ACAATGTCCATCATAGGATT+GGG + chr6.2:75755429-75755448 MS.gene40445:CDS 35.0%
ACCACTTACGATAGAAACTA+GGG + chr6.2:75754328-75754347 MS.gene40445:CDS 35.0%
ACCTTGGGATCAAATATAGT+GGG - chr6.2:75752089-75752108 None:intergenic 35.0%
ACGACACAACATAACAAAAG+AGG + chr6.2:75754530-75754549 MS.gene40445:intron 35.0%
ACTGTTTGCATAAGCTATCA+TGG - chr6.2:75753890-75753909 None:intergenic 35.0%
AGGAAGTAAAATTCTCAGTC+AGG + chr6.2:75756459-75756478 MS.gene40445:CDS 35.0%
AGGCAAAAATCTGAACAATC+TGG - chr6.2:75753444-75753463 None:intergenic 35.0%
AGTAAGATGCTTAACCAATG+TGG + chr6.2:75756774-75756793 MS.gene40445:CDS 35.0%
AGTTAATAACGTTGAGTGGA+TGG + chr6.2:75754993-75755012 MS.gene40445:intron 35.0%
AGTTGTACAACAATGGAACA+AGG + chr6.2:75752494-75752513 MS.gene40445:CDS 35.0%
ATCAAACATTGATGCCATAG+AGG + chr6.2:75757485-75757504 MS.gene40445:CDS 35.0%
ATGCAGTTAGATTAGTACGA+TGG - chr6.2:75754193-75754212 None:intergenic 35.0%
ATGTAATTACGTTCAGTGGA+TGG - chr6.2:75755049-75755068 None:intergenic 35.0%
ATTTATCCTACCAAGTTCCT+TGG + chr6.2:75753355-75753374 MS.gene40445:CDS 35.0%
CAGTTCCACAATTCTCTTTA+TGG + chr6.2:75752393-75752412 MS.gene40445:intron 35.0%
CATTCATTATGTGAAGATGC+AGG - chr6.2:75753692-75753711 None:intergenic 35.0%
CTCTTTACAATGTCCATCAT+AGG + chr6.2:75755423-75755442 MS.gene40445:CDS 35.0%
CTGCATCTTCACATAATGAA+TGG + chr6.2:75753690-75753709 MS.gene40445:intron 35.0%
CTTCTTCAATGTCTTTAGCA+CGG - chr6.2:75756813-75756832 None:intergenic 35.0%
GATAGGAAGATATATACCTG+AGG - chr6.2:75753154-75753173 None:intergenic 35.0%
GCAGCGTTATAAATTCCATA+AGG - chr6.2:75754305-75754324 None:intergenic 35.0%
GCTTACCAGAAGATCTTAAA+AGG + chr6.2:75755802-75755821 MS.gene40445:CDS 35.0%
GGAAGTAAAATTCTCAGTCA+GGG + chr6.2:75756460-75756479 MS.gene40445:CDS 35.0%
GGCAAAAATCTGAACAATCT+GGG - chr6.2:75753443-75753462 None:intergenic 35.0%
GGTGCGTGAATATAAATGAT+GGG + chr6.2:75757110-75757129 MS.gene40445:intron 35.0%
GTGTTCCTAACCTTATATGA+CGG - chr6.2:75757020-75757039 None:intergenic 35.0%
GTTTATTGTGCGTGGAAAAT+TGG + chr6.2:75756504-75756523 MS.gene40445:CDS 35.0%
TACAATGTCCATCATAGGAT+TGG + chr6.2:75755428-75755447 MS.gene40445:CDS 35.0%
TACCACTTACGATAGAAACT+AGG + chr6.2:75754327-75754346 MS.gene40445:CDS 35.0%
TACCTTGGGATCAAATATAG+TGG - chr6.2:75752090-75752109 None:intergenic 35.0%
TGCTTCAATTTCCATTCCTA+TGG + chr6.2:75751746-75751765 MS.gene40445:CDS 35.0%
TTAGGTATGAATCACCTTAC+TGG + chr6.2:75757377-75757396 MS.gene40445:intron 35.0%
TTATAACTCCTTGAACACGA+GGG - chr6.2:75756867-75756886 None:intergenic 35.0%
TTATGTTTCTCCTGAGTCAA+GGG + chr6.2:75753030-75753049 MS.gene40445:CDS 35.0%
TTTATCCTACCAAGTTCCTT+GGG + chr6.2:75753356-75753375 MS.gene40445:CDS 35.0%
! AACGTTTTGTAGATGGTTAG+TGG + chr6.2:75754753-75754772 MS.gene40445:intron 35.0%
! AAGAGAATGACTTGTGTGTT+TGG - chr6.2:75755650-75755669 None:intergenic 35.0%
! AATGAACACTTGTTAAGGTC+TGG + chr6.2:75751981-75752000 MS.gene40445:CDS 35.0%
! ACAACAATGGAACAAGGTTT+TGG + chr6.2:75752500-75752519 MS.gene40445:CDS 35.0%
! AGATTTTTGCCTCTGCTAAT+TGG + chr6.2:75753452-75753471 MS.gene40445:CDS 35.0%
! CTCTTTTCGCAAGATTTTTG+CGG + chr6.2:75756839-75756858 MS.gene40445:CDS 35.0%
! CTTTAGGAAGAAAGATACCT+TGG - chr6.2:75752105-75752124 None:intergenic 35.0%
! GAACAGTCTTCTGAAAACAA+AGG + chr6.2:75756607-75756626 MS.gene40445:CDS 35.0%
! GATGGTTAGTGGATATAACA+AGG + chr6.2:75754764-75754783 MS.gene40445:intron 35.0%
! GATTATGGAGACTTCTTTTG+AGG - chr6.2:75756663-75756682 None:intergenic 35.0%
! GCCTAACTCAAATTCTAAGA+TGG - chr6.2:75757163-75757182 None:intergenic 35.0%
! TACAATAGATTCGGGAGTAT+TGG - chr6.2:75757087-75757106 None:intergenic 35.0%
! TATGTGTATGCACTCTTTTG+GGG + chr6.2:75754362-75754381 MS.gene40445:CDS 35.0%
! TGGATTTTGGATGGTTATAG+TGG + chr6.2:75754916-75754935 MS.gene40445:intron 35.0%
! TTTTGTTCCATCCTACTTAC+AGG + chr6.2:75755724-75755743 MS.gene40445:intron 35.0%
!! AACAACCAAGCTATTTTGTG+TGG + chr6.2:75755394-75755413 MS.gene40445:CDS 35.0%
!! AAGTTTTGACACAGACAGAA+GGG - chr6.2:75756919-75756938 None:intergenic 35.0%
!! ACAACCAAGCTATTTTGTGT+GGG + chr6.2:75755395-75755414 MS.gene40445:CDS 35.0%
!! ACAATAGATTCGGGAGTATT+GGG - chr6.2:75757086-75757105 None:intergenic 35.0%
!! CATATAATGGACCACTCATT+TGG - chr6.2:75751854-75751873 None:intergenic 35.0%
!! CATTAAAAAACCGGCTTGAT+AGG + chr6.2:75757193-75757212 MS.gene40445:intron 35.0%
!! GTTTTCTACATTTGATGGCA+CGG + chr6.2:75751953-75751972 MS.gene40445:CDS 35.0%
!! TAACAGCTATTTTCTTGGGA+TGG - chr6.2:75753081-75753100 None:intergenic 35.0%
!! TATTGACTTGTGAGACTGTT+TGG + chr6.2:75753800-75753819 MS.gene40445:intron 35.0%
!! TGAGCAACTTTGAAGTAAGT+GGG - chr6.2:75752047-75752066 None:intergenic 35.0%
!! TTTTCGAGAACCATTTTCTC+AGG - chr6.2:75755990-75756009 None:intergenic 35.0%
!!! CTATCAAGCCGGTTTTTTAA+TGG - chr6.2:75757195-75757214 None:intergenic 35.0%
!!! TCCTTTTTTGCAGTTTAGGT+TGG + chr6.2:75753006-75753025 MS.gene40445:intron 35.0%
AACCAGTTATGGTTGACGAT+AGG + chr6.2:75754627-75754646 MS.gene40445:intron 40.0%
AACTTACAGGCAGACACATA+GGG - chr6.2:75756186-75756205 None:intergenic 40.0%
AAGATGCTTAACCAATGTGG+AGG + chr6.2:75756777-75756796 MS.gene40445:CDS 40.0%
AAGATGGTGTTTATTGTGCG+TGG + chr6.2:75756496-75756515 MS.gene40445:CDS 40.0%
ACCCTAGTTTCTATCGTAAG+TGG - chr6.2:75754332-75754351 None:intergenic 40.0%
ACGCGAAAGTTGTACAACAA+TGG + chr6.2:75752487-75752506 MS.gene40445:CDS 40.0%
ACTCCCGAATCTATTGTACT+CGG + chr6.2:75757089-75757108 MS.gene40445:intron 40.0%
ACTTACGATAGAAACTAGGG+TGG + chr6.2:75754331-75754350 MS.gene40445:CDS 40.0%
ACTTCCCACACAAAATAGCT+TGG - chr6.2:75755402-75755421 None:intergenic 40.0%
ACTTGCAGCAAACAGAATTC+GGG + chr6.2:75757405-75757424 MS.gene40445:CDS 40.0%
ACTTGTGAGACTGTTTGGAA+CGG + chr6.2:75753805-75753824 MS.gene40445:intron 40.0%
AGAGGGTTAACCAATGTTTG+CGG + chr6.2:75754159-75754178 MS.gene40445:intron 40.0%
AGGGTAGAAATGCAACTTAG+AGG + chr6.2:75755747-75755766 MS.gene40445:CDS 40.0%
AGTAAAATTCTCAGTCAGGG+TGG + chr6.2:75756463-75756482 MS.gene40445:CDS 40.0%
AGTTAGATTAGTACGATGGC+AGG - chr6.2:75754189-75754208 None:intergenic 40.0%
ATAGTGGCAGGAAACAAAGT+AGG + chr6.2:75751912-75751931 MS.gene40445:CDS 40.0%
ATTCATATTCGAGTCAGCCT+GGG + chr6.2:75753490-75753509 MS.gene40445:CDS 40.0%
ATTTCTACCCTCCTGTAAGT+AGG - chr6.2:75755738-75755757 None:intergenic 40.0%
CAAAACTTTCTTCAGGCTCT+TGG + chr6.2:75755486-75755505 MS.gene40445:CDS 40.0%
CAATAAGCAAAGAGGGACTA+AGG - chr6.2:75752885-75752904 None:intergenic 40.0%
CACTTGCAGCAAACAGAATT+CGG + chr6.2:75757404-75757423 MS.gene40445:CDS 40.0%
CCTCGAAATGTTTCTTCTGA+AGG - chr6.2:75751718-75751737 None:intergenic 40.0%
CCTTCAGAAGAAACATTTCG+AGG + chr6.2:75751715-75751734 MS.gene40445:CDS 40.0%
CGGTGCGTGAATATAAATGA+TGG + chr6.2:75757109-75757128 MS.gene40445:intron 40.0%
CTCGTGTTCAAGGAGTTATA+AGG + chr6.2:75756866-75756885 MS.gene40445:CDS 40.0%
CTTAGTCCCTCTTTGCTTAT+TGG + chr6.2:75752883-75752902 MS.gene40445:intron 40.0%
CTTATAACTCCTTGAACACG+AGG - chr6.2:75756868-75756887 None:intergenic 40.0%
CTTATGTTTCTCCTGAGTCA+AGG + chr6.2:75753029-75753048 MS.gene40445:CDS 40.0%
CTTCTTACTCTATGTGGAGA+AGG + chr6.2:75752566-75752585 MS.gene40445:CDS 40.0%
GAAGAAACATTTCGAGGACA+CGG + chr6.2:75751721-75751740 MS.gene40445:CDS 40.0%
GATGGGTGGTTCAAATCAAT+AGG + chr6.2:75757127-75757146 MS.gene40445:intron 40.0%
GCCAACCTAAACTGCAAAAA+AGG - chr6.2:75753010-75753029 None:intergenic 40.0%
GGCTGTCGAATATTATGTCT+AGG + chr6.2:75752940-75752959 MS.gene40445:intron 40.0%
GGTTGACGATAGGAAAAACA+AGG + chr6.2:75754637-75754656 MS.gene40445:intron 40.0%
GTGGGACAAGTAGTACAATA+AGG - chr6.2:75752029-75752048 None:intergenic 40.0%
TAACTTACAGGCAGACACAT+AGG - chr6.2:75756187-75756206 None:intergenic 40.0%
TAGTGGCAGGAAACAAAGTA+GGG + chr6.2:75751913-75751932 MS.gene40445:CDS 40.0%
TATTCGAATCAACCACGCAA+TGG + chr6.2:75752714-75752733 MS.gene40445:CDS 40.0%
TCCCACTATATTTGATCCCA+AGG + chr6.2:75752085-75752104 MS.gene40445:CDS 40.0%
TCCTAGACGTAGAAGATTCT+TGG - chr6.2:75753402-75753421 None:intergenic 40.0%
TCTCTTGAACATTCTTCTCC+AGG + chr6.2:75752780-75752799 MS.gene40445:CDS 40.0%
TGAAAAGGATTTCCAGTTGC+AGG - chr6.2:75751882-75751901 None:intergenic 40.0%
TGTGTCTGCCTGTAAGTTAT+TGG + chr6.2:75756188-75756207 MS.gene40445:intron 40.0%
TTATAACGATGCATGGATCC+AGG + chr6.2:75754235-75754254 MS.gene40445:CDS 40.0%
TTATATGCTTCTCCTGCAAC+TGG + chr6.2:75751867-75751886 MS.gene40445:CDS 40.0%
TTATCCTACCAAGTTCCTTG+GGG + chr6.2:75753357-75753376 MS.gene40445:CDS 40.0%
TTCCTATCGTCAACCATAAC+TGG - chr6.2:75754632-75754651 None:intergenic 40.0%
TTGTTAAGGTCTGGACAACT+AGG + chr6.2:75751990-75752009 MS.gene40445:CDS 40.0%
! AACGGTGTCAACAAACAACA+TGG - chr6.2:75753180-75753199 None:intergenic 40.0%
! CTGTATTAGTCTCTCACGAA+TGG - chr6.2:75756425-75756444 None:intergenic 40.0%
! CTTCTGAAGGTAGAATCTTG+AGG - chr6.2:75751705-75751724 None:intergenic 40.0%
! GACTTGTGTGTTTGGTTTCA+CGG - chr6.2:75755642-75755661 None:intergenic 40.0%
! GCGTGAATATAAATGATGGG+TGG + chr6.2:75757113-75757132 MS.gene40445:intron 40.0%
! GTGGTGAAGAACTTCTAAGA+TGG + chr6.2:75756578-75756597 MS.gene40445:CDS 40.0%
! GTTGCAGGAGAAGCATATAA+TGG - chr6.2:75751867-75751886 None:intergenic 40.0%
! TCAAATATAGTGGGAGCTCT+TGG - chr6.2:75752080-75752099 None:intergenic 40.0%
! TCATCTGGTGCTTTTCCTTA+TGG + chr6.2:75754287-75754306 MS.gene40445:CDS 40.0%
!! AAAAAACCGGCTTGATAGGT+GGG + chr6.2:75757197-75757216 MS.gene40445:intron 40.0%
!! CTCTCGTGCAAAAGTTGATA+TGG + chr6.2:75754588-75754607 MS.gene40445:intron 40.0%
!! CTGAGCAACTTTGAAGTAAG+TGG - chr6.2:75752048-75752067 None:intergenic 40.0%
!! GAAGTTTTGACACAGACAGA+AGG - chr6.2:75756920-75756939 None:intergenic 40.0%
!! GGTTTTGGCCATATTTTGCT+TGG + chr6.2:75752515-75752534 MS.gene40445:CDS 40.0%
!! TAAAAAACCGGCTTGATAGG+TGG + chr6.2:75757196-75757215 MS.gene40445:intron 40.0%
!! TGCATTTCGGTGTTGTGTTT+GGG + chr6.2:75756969-75756988 MS.gene40445:intron 40.0%
!!! GGTTCGAATTTTTTCCCTGA+TGG + chr6.2:75756375-75756394 MS.gene40445:intron 40.0%
!!! TTGCTTTTTGCGCTTCTCAT+TGG + chr6.2:75755456-75755475 MS.gene40445:CDS 40.0%
AAGGTTACATCAGGCCTGTT+TGG + chr6.2:75753756-75753775 MS.gene40445:intron 45.0%
ACCAGCATGAACCAACAACA+TGG - chr6.2:75753556-75753575 None:intergenic 45.0%
ACCTTATATGACGGCACTGT+AGG - chr6.2:75757011-75757030 None:intergenic 45.0%
ACTCCTGTTAGCCAAATGAG+TGG + chr6.2:75751840-75751859 MS.gene40445:CDS 45.0%
ACTTACAGGCAGACACATAG+GGG - chr6.2:75756185-75756204 None:intergenic 45.0%
ACTTTCTTCAGGCTCTTGGA+CGG + chr6.2:75755490-75755509 MS.gene40445:CDS 45.0%
AGGTTCATCTTCAGCCATCA+GGG - chr6.2:75756392-75756411 None:intergenic 45.0%
AGTGGCAGGAAACAAAGTAG+GGG + chr6.2:75751914-75751933 MS.gene40445:CDS 45.0%
ATCCAGAGAAGCCATAGGAA+TGG - chr6.2:75751760-75751779 None:intergenic 45.0%
ATGTCTGTCTGCAGATCTTC+TGG - chr6.2:75756017-75756036 None:intergenic 45.0%
ATTCCGGTTCCGTTATCAGA+AGG + chr6.2:75756547-75756566 MS.gene40445:CDS 45.0%
CAAGAGTCCCAATCCTATGA+TGG - chr6.2:75755439-75755458 None:intergenic 45.0%
CAAGCATCCCCTTCTGATAA+CGG - chr6.2:75756559-75756578 None:intergenic 45.0%
CAGTGCCGTCATATAAGGTT+AGG + chr6.2:75757012-75757031 MS.gene40445:intron 45.0%
CCTTATATGACGGCACTGTA+GGG - chr6.2:75757010-75757029 None:intergenic 45.0%
CGCACCGAGTACAATAGATT+CGG - chr6.2:75757096-75757115 None:intergenic 45.0%
CGTCGCCATAAAGAGAATTG+TGG - chr6.2:75752401-75752420 None:intergenic 45.0%
CTAATTGGTCAGTCTCCAAC+CGG + chr6.2:75753467-75753486 MS.gene40445:CDS 45.0%
GACACAGACAGAAGGGAAAT+GGG - chr6.2:75756912-75756931 None:intergenic 45.0%
GACTCGAATATGAATCCGGT+TGG - chr6.2:75753485-75753504 None:intergenic 45.0%
GAGGGTTAACCAATGTTTGC+GGG + chr6.2:75754160-75754179 MS.gene40445:intron 45.0%
GAGTGAAAATGCCTCCACAT+TGG - chr6.2:75756791-75756810 None:intergenic 45.0%
GATGTGGTTTCTCATGCAGA+AGG + chr6.2:75756706-75756725 MS.gene40445:intron 45.0%
GATTCATATTCGAGTCAGCC+TGG + chr6.2:75753489-75753508 MS.gene40445:CDS 45.0%
GCACCGAGTACAATAGATTC+GGG - chr6.2:75757095-75757114 None:intergenic 45.0%
GCCAAGAATCTTCTACGTCT+AGG + chr6.2:75753398-75753417 MS.gene40445:CDS 45.0%
GTATAGTTGGGCTGCAACAA+GGG + chr6.2:75755959-75755978 MS.gene40445:CDS 45.0%
GTTCCATCCTACTTACAGGA+GGG + chr6.2:75755728-75755747 MS.gene40445:intron 45.0%
TAGGTTCATCTTCAGCCATC+AGG - chr6.2:75756393-75756412 None:intergenic 45.0%
TATAGTTGGGCTGCAACAAG+GGG + chr6.2:75755960-75755979 MS.gene40445:CDS 45.0%
TATGGATCCAGAGAAGCCAT+AGG - chr6.2:75751765-75751784 None:intergenic 45.0%
TCAGGCTGAACGGTATAGTT+GGG + chr6.2:75755947-75755966 MS.gene40445:CDS 45.0%
TGACACAGACAGAAGGGAAA+TGG - chr6.2:75756913-75756932 None:intergenic 45.0%
TGTTCCATCCTACTTACAGG+AGG + chr6.2:75755727-75755746 MS.gene40445:intron 45.0%
TGTTGTACAACTTTCGCGTG+AGG - chr6.2:75752486-75752505 None:intergenic 45.0%
TGTTGTATCACCTCTTCCTC+AGG + chr6.2:75753135-75753154 MS.gene40445:CDS 45.0%
TTACTTCCCACCTATCAAGC+CGG - chr6.2:75757206-75757225 None:intergenic 45.0%
TTATCAGAAGGGGATGCTTG+TGG + chr6.2:75756559-75756578 MS.gene40445:CDS 45.0%
TTCCATTCCTATGGCTTCTC+TGG + chr6.2:75751755-75751774 MS.gene40445:CDS 45.0%
TTCCGGTTCCGTTATCAGAA+GGG + chr6.2:75756548-75756567 MS.gene40445:CDS 45.0%
TTCTGCTCTTCATGGATTCC+TGG + chr6.2:75752450-75752469 MS.gene40445:CDS 45.0%
! AGACTGTTTGGAACGGCTTA+CGG + chr6.2:75753812-75753831 MS.gene40445:intron 45.0%
! CCACGTGTTTCTGACAGAAT+CGG - chr6.2:75751666-75751685 None:intergenic 45.0%
! GCAAACATTGGTTAACCCTC+TGG - chr6.2:75754160-75754179 None:intergenic 45.0%
! GTGTGTTTGGTTTCACGGTA+GGG - chr6.2:75755637-75755656 None:intergenic 45.0%
! GTTTGTTGACACCGTTACCT+CGG + chr6.2:75753184-75753203 MS.gene40445:intron 45.0%
! TCACGAATGGCGTCTAAGAT+AGG - chr6.2:75756412-75756431 None:intergenic 45.0%
! TGTGTGTTTGGTTTCACGGT+AGG - chr6.2:75755638-75755657 None:intergenic 45.0%
!! AAGGGGTGTTCCTGAGAAAA+TGG + chr6.2:75755977-75755996 MS.gene40445:CDS 45.0%
!! CAAACAGAATTCGGGTTGCA+TGG + chr6.2:75757413-75757432 MS.gene40445:CDS 45.0%
!! CTGCATTTCGGTGTTGTGTT+TGG + chr6.2:75756968-75756987 MS.gene40445:intron 45.0%
!! GGCTGACTCGAATATGAATC+CGG - chr6.2:75753489-75753508 None:intergenic 45.0%
!! TTCGGGTTGCATGGAGATAT+AGG + chr6.2:75757422-75757441 MS.gene40445:CDS 45.0%
!! TTCGGTGTTGTGTTTGGGTT+GGG + chr6.2:75756974-75756993 MS.gene40445:intron 45.0%
!! TTTCGGTGTTGTGTTTGGGT+TGG + chr6.2:75756973-75756992 MS.gene40445:intron 45.0%
!! ACATTTAATATTATAAAAAA+AGG + chr6.2:75755206-75755225 MS.gene40445:intron 5.0%
!! ATTTAATATTATAAAAAAAG+GGG + chr6.2:75755208-75755227 MS.gene40445:intron 5.0%
!! CATTTAATATTATAAAAAAA+GGG + chr6.2:75755207-75755226 MS.gene40445:intron 5.0%
!! TATAATATTAAATGTTAAAA+TGG - chr6.2:75755201-75755220 None:intergenic 5.0%
!!! TAAATTATATTTTTAAAAGA+AGG - chr6.2:75752208-75752227 None:intergenic 5.0%
AAGCTATCATGGCGAGCTCA+TGG - chr6.2:75753879-75753898 None:intergenic 50.0%
AATCATTGGAGCCCTGATCC+TGG - chr6.2:75754256-75754275 None:intergenic 50.0%
ATGACCCCAAGGAACTTGGT+AGG - chr6.2:75753364-75753383 None:intergenic 50.0%
ATGCTATCCGGCCATGTTGT+TGG + chr6.2:75753542-75753561 MS.gene40445:CDS 50.0%
ATTTGCTCCTGATGACCCCA+AGG - chr6.2:75753375-75753394 None:intergenic 50.0%
CAGACAGAAGGGAAATGGGA+TGG - chr6.2:75756908-75756927 None:intergenic 50.0%
CAGCAAATCAGTACTCTGGC+TGG + chr6.2:75755366-75755385 MS.gene40445:intron 50.0%
CATGGCGAGCTCATGGAAAT+AGG - chr6.2:75753872-75753891 None:intergenic 50.0%
CCCTACAGTGCCGTCATATA+AGG + chr6.2:75757007-75757026 MS.gene40445:intron 50.0%
CCGAATCTTGTCGGACATAC+CGG + chr6.2:75751795-75751814 MS.gene40445:CDS 50.0%
CCGATTCTGTCAGAAACACG+TGG + chr6.2:75751663-75751682 MS.gene40445:CDS 50.0%
CCGGTATGTCCGACAAGATT+CGG - chr6.2:75751798-75751817 None:intergenic 50.0%
CTACCCTCCTGTAAGTAGGA+TGG - chr6.2:75755734-75755753 None:intergenic 50.0%
CTTCTCTGGATCCATACGAG+AGG + chr6.2:75751769-75751788 MS.gene40445:CDS 50.0%
GAGAGGCAACCGAATCTTGT+CGG + chr6.2:75751786-75751805 MS.gene40445:CDS 50.0%
GAGGTCGTGATGTTGAGCAA+TGG + chr6.2:75755766-75755785 MS.gene40445:CDS 50.0%
GATCTTCTGGTAAGCGACGA+TGG - chr6.2:75755797-75755816 None:intergenic 50.0%
GATGCATGGATCCAGGATCA+GGG + chr6.2:75754242-75754261 MS.gene40445:CDS 50.0%
GCATCTTACTGTTCTGTCGC+TGG - chr6.2:75756764-75756783 None:intergenic 50.0%
GCATGAACCAACAACATGGC+CGG - chr6.2:75753552-75753571 None:intergenic 50.0%
GCGTGAGGATTCATAACTCC+AGG - chr6.2:75752471-75752490 None:intergenic 50.0%
GCTGCAAGTGATCTCCAGTA+AGG - chr6.2:75757394-75757413 None:intergenic 50.0%
GGACCACTCATTTGGCTAAC+AGG - chr6.2:75751846-75751865 None:intergenic 50.0%
GGAGACTGACCAATTAGCAG+AGG - chr6.2:75753464-75753483 None:intergenic 50.0%
GGTATAGTTGGGCTGCAACA+AGG + chr6.2:75755958-75755977 MS.gene40445:CDS 50.0%
GGTTCATGCTGGTACCTCTT+TGG + chr6.2:75753563-75753582 MS.gene40445:CDS 50.0%
GTCAGGCTGAACGGTATAGT+TGG + chr6.2:75755946-75755965 MS.gene40445:CDS 50.0%
TACTCACCTGTAGGCCAAAG+AGG - chr6.2:75753580-75753599 None:intergenic 50.0%
TATGGCGACGCCAAAGGTTA+TGG + chr6.2:75752411-75752430 MS.gene40445:CDS 50.0%
TCCGGTTCCGTTATCAGAAG+GGG + chr6.2:75756549-75756568 MS.gene40445:CDS 50.0%
TCTCCTGAGTCAAGGGTTGT+TGG + chr6.2:75753037-75753056 MS.gene40445:CDS 50.0%
TCTCTTTATGGCGACGCCAA+AGG + chr6.2:75752405-75752424 MS.gene40445:CDS 50.0%
! AGATTCGGTTGCCTCTCGTA+TGG - chr6.2:75751783-75751802 None:intergenic 50.0%
! AGTCAAGGGTTGTTGGTGCT+GGG + chr6.2:75753044-75753063 MS.gene40445:CDS 50.0%
! CAAGTGTTGTTGCCATTGCG+TGG - chr6.2:75752729-75752748 None:intergenic 50.0%
! CGTGGAAAATTGGAGAGCGT+CGG + chr6.2:75756514-75756533 MS.gene40445:CDS 50.0%
! GCTAACAGGAGTTTTCCTCG+TGG - chr6.2:75751832-75751851 None:intergenic 50.0%
! GTTTTCCTCGTGGTACGAAG+CGG - chr6.2:75751822-75751841 None:intergenic 50.0%
! TCAACACAGCACCGAGGTAA+CGG - chr6.2:75753198-75753217 None:intergenic 50.0%
!! AAAATTGGAGAGCGTCGGAG+AGG + chr6.2:75756519-75756538 MS.gene40445:CDS 50.0%
!! GCCATGTTGTTGGTTCATGC+TGG + chr6.2:75753552-75753571 MS.gene40445:CDS 50.0%
!! GGGTGGTCTTGTACAGAAGA+TGG + chr6.2:75756480-75756499 MS.gene40445:CDS 50.0%
!! TCCCCTTCTGATAACGGAAC+CGG - chr6.2:75756553-75756572 None:intergenic 50.0%
!! TGCACTCTTTTGGGGATTCC+AGG + chr6.2:75754370-75754389 MS.gene40445:CDS 50.0%
CCAAGTTCCTTGGGGTCATC+AGG + chr6.2:75753365-75753384 MS.gene40445:CDS 55.0%
CCTGATGACCCCAAGGAACT+TGG - chr6.2:75753368-75753387 None:intergenic 55.0%
CGATGCATGGATCCAGGATC+AGG + chr6.2:75754241-75754260 MS.gene40445:CDS 55.0%
CGTCGGAGAGGATGGAATTC+CGG + chr6.2:75756531-75756550 MS.gene40445:CDS 55.0%
CTGGTACCTCTTTGGCCTAC+AGG + chr6.2:75753571-75753590 MS.gene40445:CDS 55.0%
GAGTCAAGGGTTGTTGGTGC+TGG + chr6.2:75753043-75753062 MS.gene40445:CDS 55.0%
GCACCAACAACCCTTGACTC+AGG - chr6.2:75753043-75753062 None:intergenic 55.0%
TTCTGTCGCTGGTCAAACCC+TGG - chr6.2:75756753-75756772 None:intergenic 55.0%
TTCTTCAGGCTCTTGGACGG+AGG + chr6.2:75755493-75755512 MS.gene40445:CDS 55.0%
! AAGGCATCAACACAGCACCG+AGG - chr6.2:75753204-75753223 None:intergenic 55.0%
! GGAGAGTACGTCAGGCTGAA+CGG + chr6.2:75755937-75755956 MS.gene40445:intron 55.0%
!! GTCAAGGGTTGTTGGTGCTG+GGG + chr6.2:75753045-75753064 MS.gene40445:CDS 55.0%
GGCAGGCATCCCGCAAACAT+TGG - chr6.2:75754172-75754191 None:intergenic 60.0%
TCTTGGACGGAGGTAGAGCG+TGG + chr6.2:75755503-75755522 MS.gene40445:intron 60.0%
TTGCGGAGCCCTCGTGTTCA+AGG + chr6.2:75756856-75756875 MS.gene40445:CDS 60.0%
!! TTGGAGAGCGTCGGAGAGGA+TGG + chr6.2:75756523-75756542 MS.gene40445:CDS 60.0%
CCTCGTGGTACGAAGCGGAC+CGG - chr6.2:75751817-75751836 None:intergenic 65.0%
CCGGTCCGCTTCGTACCACG+AGG + chr6.2:75751814-75751833 MS.gene40445:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 75751636 75757504 75751636 ID=MS.gene40445
chr6.2 mRNA 75751636 75757504 75751636 ID=MS.gene40445.t1;Parent=MS.gene40445
chr6.2 exon 75751636 75752106 75751636 ID=MS.gene40445.t1.exon1;Parent=MS.gene40445.t1
chr6.2 CDS 75751636 75752106 75751636 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75752396 75752587 75752396 ID=MS.gene40445.t1.exon2;Parent=MS.gene40445.t1
chr6.2 CDS 75752396 75752587 75752396 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75752703 75752801 75752703 ID=MS.gene40445.t1.exon3;Parent=MS.gene40445.t1
chr6.2 CDS 75752703 75752801 75752703 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75753019 75753156 75753019 ID=MS.gene40445.t1.exon4;Parent=MS.gene40445.t1
chr6.2 CDS 75753019 75753156 75753019 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75753344 75753592 75753344 ID=MS.gene40445.t1.exon5;Parent=MS.gene40445.t1
chr6.2 CDS 75753344 75753592 75753344 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75754161 75754391 75754161 ID=MS.gene40445.t1.exon6;Parent=MS.gene40445.t1
chr6.2 CDS 75754161 75754391 75754161 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75755369 75755514 75755369 ID=MS.gene40445.t1.exon7;Parent=MS.gene40445.t1
chr6.2 CDS 75755369 75755514 75755369 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75755746 75755823 75755746 ID=MS.gene40445.t1.exon8;Parent=MS.gene40445.t1
chr6.2 CDS 75755746 75755823 75755746 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75755938 75756067 75755938 ID=MS.gene40445.t1.exon9;Parent=MS.gene40445.t1
chr6.2 CDS 75755938 75756067 75755938 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75756376 75756628 75756376 ID=MS.gene40445.t1.exon10;Parent=MS.gene40445.t1
chr6.2 CDS 75756376 75756628 75756376 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75756725 75756887 75756725 ID=MS.gene40445.t1.exon11;Parent=MS.gene40445.t1
chr6.2 CDS 75756725 75756887 75756725 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
chr6.2 exon 75757381 75757504 75757381 ID=MS.gene40445.t1.exon12;Parent=MS.gene40445.t1
chr6.2 CDS 75757381 75757504 75757381 ID=cds.MS.gene40445.t1;Parent=MS.gene40445.t1
Gene Sequence

>MS.gene40445

ATGAATCATTTTGATAAAGATGAAATTCCGATTCTGTCAGAAACACGTGGACAACGATCTGATGAACCTCAAGATTCTACCTTCAGAAGAAACATTTCGAGGACACGGAGTGCTTCAATTTCCATTCCTATGGCTTCTCTGGATCCATACGAGAGGCAACCGAATCTTGTCGGACATACCGGTCCGCTTCGTACCACGAGGAAAACTCCTGTTAGCCAAATGAGTGGTCCATTATATGCTTCTCCTGCAACTGGAAATCCTTTTCAGAATAATATAATAGTGGCAGGAAACAAAGTAGGGGAGAACAAGACAGAAAAGTTTTCTACATTTGATGGCACGGATAAAAATGAACACTTGTTAAGGTCTGGACAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGTCCCACTTACTTCAAAGTTGCTCAGCAAAGAAAACCAAGAGCTCCCACTATATTTGATCCCAAGGTATCTTTCTTCCTAAAGTAATAGACTTTTATTTCTTCATAAATTTAAGAAAAGACTGACTTCTATGTTTTGAAATTGACTTCATGACGATGATTCTGCCTTCTTTTAAAAATATAATTTATAGATATCTGATGATTTTCATATTAATAGATAGCTTTACTTTTGTTTTCAATGGCAATTACTATGATGAATGCGCCTTTTTTGTCATATAGTTGTGCACATTTTGTTTGTGTTTGCTGTTACTTTCACATAAACAATCATACATTTTTCATGTTTTGAATGTTTACAGTTCCACAATTCTCTTTATGGCGACGCCAAAGGTTATGGAAGAAAACTTTTTTCTTTCTGCTCTTCATGGATTCCTGGAGTTATGAATCCTCACGCGAAAGTTGTACAACAATGGAACAAGGTTTTGGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCGTTATTTTTCTTCTTACTCTATGTGGAGAAGGTATGATTCTTTTCATTTTATTTAAGTTTAAAACCTTCCATCATCATTTTACATTACTTTTTTCTTTACTTACAAATAAAATAAAACTTCGCTTTTTCTTATTCGTTTTCTGCAGAAAAATAAATGTATTCGAATCAACCACGCAATGGCAACAACACTTGTTGTACTTAGAAGCATAACTGATGTTGTGTATCTCTTGAACATTCTTCTCCAGGTAATTTTCCTTAAACATCTATTGATAGAATGATAGACCATTTGAATGTAAATGTTTCTAATGGTTGATCTTATAATTTTCCTTAGTCCCTCTTTGCTTATTGGAAGAAAAAGTGCATGTGTCTTGAATCTTAAACATGGCTGTCGAATATTATGTCTAGGTTATTTTGTTTTCATCGTTTAAGATTATATAACTCTACCAATTTCCTTTTTTGCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTTGTTGGTGCTGGGGATTTAGTTGACCATCCCAAGAAAATAGCTGTTAATTACTTTAAGAGCTACTTTCTCTTCGACTTATTTGTTGTATCACCTCTTCCTCAGGTATATATCTTCCTATCTCTCCATGTTGTTTGTTGACACCGTTACCTCGGTGCTGTGTTGATGCCTTAATAAATAGTATGCTTAATTGAACAAGTGCTTAACGATATGTATTTGACATGGAAGAAAAGGGATTTTAATCTGTGAAAAAGACTACAAGATTATGATGTGTGTTATGAAATATTTGCAGATAATGATAATATTTATCCTACCAAGTTCCTTGGGGTCATCAGGAGCAAATTATGCCAAGAATCTTCTACGTCTAGGAATCCTTATCCAATATATTCCCAGATTGTTCAGATTTTTGCCTCTGCTAATTGGTCAGTCTCCAACCGGATTCATATTCGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTGATTTTTATGCTATCCGGCCATGTTGTTGGTTCATGCTGGTACCTCTTTGGCCTACAGGTGAGTAATAAAAATGACATTTGAAGCTTCATTCTCAAAAAATAAAAAATTCACATTTTGCTCTAAATTCTCACCTTGCATTCAAATACAAAGAACCCTGCATCTTCACATAATGAATGGAAAAAACAATATTAATTGATTCACTTTAATGCTTCTGATTAATAAGGTTACATCAGGCCTGTTTGGTTAGACTTATTTGAGCTTATTTATTGACTTGTGAGACTGTTTGGAACGGCTTACGGAAACAACTTATACATGTCCATCAGTTGTTTTGAGCCTATTTCCATGAGCTCGCCATGATAGCTTATGCAAACAGTTTATAGCTTATATGAAAACAATCTGCATTTATTTTATCTTTTATCATAAGCCCTAATCAAGTTGTTTATTCAAACAGGGCCATAGTATGATAATATGTTGCAAGAATTACAATCAAAATTAAGCTTTATTATGTTTTGTTGAATGCTTTAAATAAGAATGGTTCAATTAGAATCAAGAATTTAATTCAGTAAATGAATGTTGGGTAAATTTCAATTTACTAACTTCTCTCATATTATTTCTCTTCTTCCAGAGGGTTAACCAATGTTTGCGGGATGCCTGCCATCGTACTAATCTAACTGCATGCATGAAATTGATTGATTGTCATTATAACGATGCATGGATCCAGGATCAGGGCTCCAATGATTGTTTGAATTCTTCATCTGGTGCTTTTCCTTATGGAATTTATAACGCTGCTGTACCACTTACGATAGAAACTAGGGTGGTCAACAAATATGTGTATGCACTCTTTTGGGGATTCCAGGTATGCATTTTGCAATTTATTTTCTTCCCTCAGTTGTAACTATACAAATTTTGTCCTATAATATTGAGCTGAGAATATTCGAATTTGCTTAATATATTGTGCCTCCAATGAAAATAAACAGCTTAACATATCTTTTTAACGACACAACATAACAAAAGAGGACTATGAAGATAAACAATGTAAATTGGTATGAAAACTCTCGTGCAAAAGTTGATATGGATGTCTCATAAGTCATAACCAGTTATGGTTGACGATAGGAAAAACAAGGTTTAAAAGTAAGAGGTGTGTTATTTTGACACAAAATGGAACAAGAAAATTCAAATAATTTGGTAATTTAACACAGTTCAAATACATGGTTAAAAACGTTTTGTAGATGGTTAGTGGATATAACAAGGTGTTGCAGCTCATTAGCCATGCACATAATACAATTAACGAAAATTTTTAATGTTATTGACCACAATGTTCAGATGTATATTTGAACAAAAATTGTGGTTAATAGATATTATGTATATTTGAAAATAATTTGGATTTTGGATGGTTATAGTGGATATCATGTGTATTTCAACATTTGAAAATCATGGTTAATGACGTTTAAAATAGTAGTTAATAACGTTGAGTGGATGGTGAGTTGTGACACCTTGTTAAATTCATTAACCATCCACTGAACGTAATTACATACATATTTGAATTATGTTAACCAATCAAATTGTTTTCCTCCTTTTATGTAAAAGGAAATAGGTAATTGACAAAACTATTGTTTTCCTCGTTTTAATTTTCATATGCAGTTTCACCAAATCACATTTATACCATTTTAACATTTAATATTATAAAAAAAGGGGAAGACAAGGATTAAACTTTGAAAAAAATGATCAAAATGTTGTCTAATATCATGTCAAGGGCTAACTTGAATCAACGCTAAAAGGCAAATGAATGGTTTCATATTACTTACCAATTATACACATTGATCTTTAATACAGCAAATCAGTACTCTGGCTGGTAATCAACAACCAAGCTATTTTGTGTGGGAAGTTCTCTTTACAATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGACGGAGGTAGAGCGTGGTTCTCTTACTTTATGTTTACGTTAATTGTTGGTGACATCAATGCTTTGTCGTGTGTGTTTCGTTTCATGATAAAAAAAATTGATTTTGAACGAATCATTTTTGGCTCTCCCTACCGTGAAACCAAACACACAAGTCATTCTCTTTCCTTCTAAATTAACTTCTGTTTAAAGTTCCTTTCATTTTAAAATCTTGATACATTTTGTTCCATCCTACTTACAGGAGGGTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAACCATCGTCGCTTACCAGAAGATCTTAAAAGGTATGAAATGTTCTAGTTCTTTTAACGAATGACATCAACATTGGCAAAACGCATCTATTTAAATAATGGATTACATATAATGTACAACTGATGGATACGATATCTGTCATGCAGGAGAGTACGTCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTCGAAAATTTGCCAGAAGATCTGCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAATAAAGTATGCATTTAAAAAGAGTTCATGATATACTCTTTAAGTCGATTTTATTTATCTGGTTCAGATGTTATGTGAAGTTTAAAATCTCACCTATAATGTTTTAAATCAAATTCGTTTCCCCTATGTGTCTGCCTGTAAGTTATTGGAATCCAATAGAAGTTGAATGAGAAAACAATTTTGAAGACAAACATTTTTGCATATTCATAATGAAACTATAACAATGACACATCAAAAGCCAATTATATTAAACAAGTTTGAATGCTATTTATGATGATGATTTTATTTTCTATGATGATCTAACATTTCTACAGGTTCGAATTTTTTCCCTGATGGCTGAAGATGAACCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACGACATACATTAAAGGAAGTAAAATTCTCAGTCAGGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCGTCGGAGAGGATGGAATTCCGGTTCCGTTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAACAAAGGTACACCTATACTTAATAAAATGATAACTTGCCTCAAAAGAAGTCTCCATAATCAGTACCTCAAAACATGTTTAATCGATGTGGTTTCTCATGCAGAAGGTAAAAAAATAAAACTTCACGGCCAGGGTTTGACCAGCGACAGAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGTGCTAAAGACATTGAAGAAGTCACAACTCTTTTCGCAAGATTTTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTCATTTATTTATTCATCCATCCCATTTCCCTTCTGTCTGTGTCAAAACTTCAATATGTCTTCACCCTTTTATGATTCAACTGCATTTCGGTGTTGTGTTTGGGTTGGGCTTAACTCAACCCTACAGTGCCGTCATATAAGGTTAGGAACACCCATCACTTATAAACACATTCTCAGACCTTGACTTAGATTTTTCCCAATACTCCCGAATCTATTGTACTCGGTGCGTGAATATAAATGATGGGTGGTTCAAATCAATAGGCTCTTTGATACCATCTTAGAATTTGAGTTAGGCCTAACTTAACCATTAAAAAACCGGCTTGATAGGTGGGAAGTAAGAACTACCATATTTTCATATCTTATCTCATCAAATATGGGACTCGTAACAATTTGCGTATCTGATACAAATCCTAAAGTATGCTATTTACATGTCTAATATCTATTATCAAAACCATGTCTCTGACATAATGATTTGGTTGTTGTGTTATGTTAGGTATGAATCACCTTACTGGAGATCACTTGCAGCAAACAGAATTCGGGTTGCATGGAGATATAGGAAGAAACGTATAAGTCGAGCTAATACCACTCAAAATGATTATCAAACATTGATGCCATAG
Protein sequence

>MS.gene40445.t1

MNHFDKDEIPILSETRGQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTTRKTPVSQMSGPLYASPATGNPFQNNIIVAGNKVGENKTEKFSTFDGTDKNEHLLRSGQLGMCNDPYCTTCPTYFKVAQQRKPRAPTIFDPKFHNSLYGDAKGYGRKLFSFCSSWIPGVMNPHAKVVQQWNKVLAIFCLVAIFVDPLFFFLLYVEKKNKCIRINHAMATTLVVLRSITDVVYLLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQIMIIFILPSSLGSSGANYAKNLLRLGILIQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHRTNLTACMKLIDCHYNDAWIQDQGSNDCLNSSSGAFPYGIYNAAVPLTIETRVVNKYVYALFWGFQQISTLAGNQQPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVNKVRIFSLMAEDEPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESVGEDGIPVPLSEGDACGEELLRWYLEQSSENKEGKKIKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARFLRSPRVQGVIRYESPYWRSLAANRIRVAWRYRKKRISRANTTQNDYQTLMP