Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40622.t1 | XP_003591052.2 | 96 | 399 | 16 | 0 | 1 | 399 | 16 | 414 | 1.50E-224 | 788.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40622.t1 | Q8RXC8 | 60.4 | 402 | 137 | 3 | 20 | 399 | 3 | 404 | 5.6e-140 | 498.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40622.t1 | G7I7G7 | 96.0 | 399 | 16 | 0 | 1 | 399 | 16 | 414 | 1.1e-224 | 788.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052077 | MS.gene40622 | 0.807801 | 4.23E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene40622 | 0.810153 | 1.33E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene40622 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene40622 | 0.828591 | 8.26E-55 | -1.69E-46 |
| MS.gene054349 | MS.gene40622 | 0.815738 | 7.93E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene40622 | 0.814361 | 1.60E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene40622 | 0.836175 | 1.09E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene40622 | 0.808394 | 3.16E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene40622 | 0.818859 | 1.57E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene40622 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene40622 | 0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene40622 | 0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene40622 | 0.81588 | 7.37E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene40622 | 0.829034 | 6.45E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 82 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTAGAAGCTTGTGTTAA+AGG | 0.177953 | 1.4:-66582027 | MS.gene40622:CDS |
| TGAAATAGACTTAAGAAATA+TGG | 0.245239 | 1.4:-66582091 | MS.gene40622:intron |
| AAAACTGATGTTTACTCTTT+TGG | 0.257821 | 1.4:-66579949 | MS.gene40622:CDS |
| TTTGTACAGATTTGTGATTT+TGG | 0.258733 | 1.4:-66580167 | MS.gene40622:intron |
| CCAACAAGCTTTGCAGTATT+AGG | 0.268871 | 1.4:+66580871 | None:intergenic |
| TAACTTGTAGAAAATTTAAT+TGG | 0.269800 | 1.4:-66581036 | MS.gene40622:intron |
| CCAAGTTGGATTGGAGTAAA+AGG | 0.284690 | 1.4:-66580556 | MS.gene40622:CDS |
| TCCACATTTGAAGGCACATT+TGG | 0.301829 | 1.4:-66580101 | MS.gene40622:CDS |
| AATTGTTGGTTGCATTTCTT+AGG | 0.306857 | 1.4:+66581767 | None:intergenic |
| TTGTCTACACTGGGAAGTTT+AGG | 0.316481 | 1.4:-66580811 | MS.gene40622:CDS |
| CTCATGCGAGGGCGTAAAAT+AGG | 0.319437 | 1.4:+66577455 | None:intergenic |
| CACTAGAGAAAATTTAATTC+CGG | 0.332394 | 1.4:-66581839 | MS.gene40622:CDS |
| GAAGCTTGTGTTAAAGGCTT+TGG | 0.338664 | 1.4:-66582021 | MS.gene40622:CDS |
| AATAATTCATAGAGATATTA+AGG | 0.339482 | 1.4:-66580471 | MS.gene40622:CDS |
| CTTCAAATGTGGACATATTA+TGG | 0.340392 | 1.4:+66580111 | None:intergenic |
| AGCCTTTAACACAAGCTTCT+AGG | 0.349241 | 1.4:+66582025 | None:intergenic |
| CCTAATACTGCAAAGCTTGT+TGG | 0.349838 | 1.4:-66580871 | MS.gene40622:CDS |
| CTACTGTTGGAGATCATAAC+TGG | 0.361138 | 1.4:-66579922 | MS.gene40622:CDS |
| ACTAGAGAAAATTTAATTCC+GGG | 0.364790 | 1.4:-66581838 | MS.gene40622:CDS |
| ATGCCATGCATGCAATATTC+AGG | 0.366033 | 1.4:+66579982 | None:intergenic |
| CATAACTGGGCGTAAGGCTT+TGG | 0.370377 | 1.4:-66579908 | MS.gene40622:CDS |
| CAGCTATTAGTTGTCCATCT+TGG | 0.371225 | 1.4:+66580977 | None:intergenic |
| GATGTTATTGATCCTTCTCT+TGG | 0.372745 | 1.4:-66577545 | MS.gene40622:CDS |
| GCTAGTAAATCAAAGAAGAT+AGG | 0.374965 | 1.4:-66582226 | MS.gene40622:CDS |
| GCTTGTTCTGCTTCTGCTCA+AGG | 0.377283 | 1.4:-66582193 | MS.gene40622:intron |
| TTATGGTGAGTCAATTGTTC+TGG | 0.378138 | 1.4:+66580128 | None:intergenic |
| GCTGGCTTTCTATCCGAGTT+AGG | 0.382432 | 1.4:-66580916 | MS.gene40622:CDS |
| CGCCCTCGAATTCGAACAAC+TGG | 0.389048 | 1.4:+66581972 | None:intergenic |
| CTAACTTCTATTCCTTCAAT+TGG | 0.394080 | 1.4:-66581895 | MS.gene40622:CDS |
| GTGTGCCAAAGATACCAAAA+TGG | 0.397677 | 1.4:-66581873 | MS.gene40622:CDS |
| CCACATTTGAAGGCACATTT+GGG | 0.400265 | 1.4:-66580100 | MS.gene40622:intron |
| TTCGAGGGCGCGATCCCATT+GGG | 0.408556 | 1.4:-66581959 | MS.gene40622:CDS |
| CATAATATGTCCACATTTGA+AGG | 0.409224 | 1.4:-66580110 | MS.gene40622:CDS |
| CATCATCTTTCTCTTTCTCA+AGG | 0.433204 | 1.4:+66582067 | None:intergenic |
| AGTTTAGGACATGTTCTTCA+TGG | 0.436568 | 1.4:-66580796 | MS.gene40622:intron |
| TTTACGCCCTCGCATGAGTC+AGG | 0.441107 | 1.4:-66577450 | None:intergenic |
| GCTTGATGCTAATAATATCA+AGG | 0.460059 | 1.4:-66577567 | MS.gene40622:CDS |
| CAGATAAAACCAAGTTGGAT+TGG | 0.463447 | 1.4:-66580565 | MS.gene40622:CDS |
| GTAGAAAATTTAATTGGAAG+AGG | 0.472062 | 1.4:-66581030 | MS.gene40622:intron |
| CAAGCTTCTAGGACTCCTCT+TGG | 0.472166 | 1.4:+66582036 | None:intergenic |
| CTAAAATTGTATAGATTGCC+CGG | 0.477283 | 1.4:+66581820 | None:intergenic |
| AAACCAGTTGTTCGAATTCG+AGG | 0.478414 | 1.4:-66581975 | MS.gene40622:CDS |
| ATCTTTGGCACACCAATTGA+AGG | 0.491921 | 1.4:+66581883 | None:intergenic |
| CAATTGAAGGAATAGAAGTT+AGG | 0.494195 | 1.4:+66581896 | None:intergenic |
| ATTCGAGGGCGCGATCCCAT+TGG | 0.501198 | 1.4:-66581960 | MS.gene40622:CDS |
| TAAGACATCCCATCTGTCCT+TGG | 0.504928 | 1.4:+66577510 | None:intergenic |
| CATACCATGGCTGAAATTGT+TGG | 0.506381 | 1.4:+66581753 | None:intergenic |
| GAAAATTTAATTGGAAGAGG+TGG | 0.507335 | 1.4:-66581027 | MS.gene40622:CDS |
| GCTGTGAAGAAAATGACTAC+AGG | 0.508408 | 1.4:-66580958 | MS.gene40622:CDS |
| TGTCTTCGAATTGTCTACAC+TGG | 0.522843 | 1.4:-66580821 | MS.gene40622:CDS |
| TCTCCTGAATATTGCATGCA+TGG | 0.524051 | 1.4:-66579985 | MS.gene40622:CDS |
| TAACTATGACCAAGGACAGA+TGG | 0.524599 | 1.4:-66577519 | MS.gene40622:CDS |
| CCCAAATGTGCCTTCAAATG+TGG | 0.526672 | 1.4:+66580100 | None:intergenic |
| TGCAGACAAGTCTCGTGACA+TGG | 0.530032 | 1.4:-66579879 | MS.gene40622:CDS |
| GAACAACTGGTTTCAGACTC+AGG | 0.530252 | 1.4:+66581985 | None:intergenic |
| GTTTCTCTCGGAATTGCTGA+TGG | 0.536698 | 1.4:-66580527 | MS.gene40622:CDS |
| AACTATGACCAAGGACAGAT+GGG | 0.546875 | 1.4:-66577518 | MS.gene40622:CDS |
| AGGTTCAGATAAAACCAAGT+TGG | 0.548946 | 1.4:-66580570 | MS.gene40622:CDS |
| TACAAGGGTTGTCTCCAAGA+TGG | 0.558410 | 1.4:-66580991 | MS.gene40622:CDS |
| AGCACAGATGAAAAGACAGC+TGG | 0.561639 | 1.4:-66580934 | MS.gene40622:CDS |
| GTCTTCGAATTGTCTACACT+GGG | 0.567882 | 1.4:-66580820 | MS.gene40622:CDS |
| AAAAGGTACAAAGTTTCTCT+CGG | 0.570792 | 1.4:-66580539 | MS.gene40622:CDS |
| CTTGGAGATAACTATGACCA+AGG | 0.571205 | 1.4:-66577527 | MS.gene40622:CDS |
| GGAGATCATAACTGGGCGTA+AGG | 0.571874 | 1.4:-66579914 | MS.gene40622:CDS |
| AACCAGTTGTTCGAATTCGA+GGG | 0.575540 | 1.4:-66581974 | MS.gene40622:CDS |
| ATGAGCAATAACTCCTAACT+CGG | 0.584227 | 1.4:+66580903 | None:intergenic |
| CTTGTTGGATGTTGTGTAGA+GGG | 0.588506 | 1.4:-66580856 | MS.gene40622:CDS |
| CTGTGAAGAAAATGACTACA+GGG | 0.589319 | 1.4:-66580957 | MS.gene40622:CDS |
| GTATTTACCTGACTCATGCG+AGG | 0.607333 | 1.4:+66577443 | None:intergenic |
| GCAACCAACAATTTCAGCCA+TGG | 0.612548 | 1.4:-66581757 | MS.gene40622:intron |
| TGAGAAAGAGAAAGATGATG+AGG | 0.613400 | 1.4:-66582064 | MS.gene40622:CDS |
| GCAGACAAGTCTCGTGACAT+GGG | 0.617516 | 1.4:-66579878 | MS.gene40622:intron |
| TACTGTTGGAGATCATAACT+GGG | 0.623795 | 1.4:-66579921 | MS.gene40622:CDS |
| ATATTATTAGCATCAAGCAA+AGG | 0.623871 | 1.4:+66577572 | None:intergenic |
| ATATTGCATGCATGGCATAG+TGG | 0.627641 | 1.4:-66579977 | MS.gene40622:CDS |
| TCATAGTTATCTCCAAGAGA+AGG | 0.628925 | 1.4:+66577533 | None:intergenic |
| TTGCATTTCTTAGGTCAGAG+AGG | 0.629717 | 1.4:+66581776 | None:intergenic |
| TATTTACCTGACTCATGCGA+GGG | 0.637747 | 1.4:+66577444 | None:intergenic |
| ATTTGCATGAGAATTGTCAA+AGG | 0.658970 | 1.4:-66580496 | MS.gene40622:CDS |
| TCGAGGGCGCGATCCCATTG+GGG | 0.674211 | 1.4:-66581958 | MS.gene40622:CDS |
| GCTTGTTGGATGTTGTGTAG+AGG | 0.681108 | 1.4:-66580857 | MS.gene40622:CDS |
| GATGATGAGGCATCTCCAAG+AGG | 0.701480 | 1.4:-66582051 | MS.gene40622:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATAAAAAAAAAAT+AGG | - | chr1.4:66580937-66580956 | MS.gene40622:CDS | 0.0% |
| !! | TTAAAAATAAAAAAAAAATA+GGG | - | chr1.4:66580938-66580957 | MS.gene40622:CDS | 0.0% |
| !! | AAACAAAACAATAAAACTAA+AGG | - | chr1.4:66581985-66582004 | MS.gene40622:CDS | 15.0% |
| !! | AATAATTCATAGAGATATTA+AGG | - | chr1.4:66579225-66579244 | MS.gene40622:intron | 15.0% |
| !! | TAAAAACAAAAGAAGTTTAA+AGG | + | chr1.4:66578963-66578982 | None:intergenic | 15.0% |
| !! | TAATGTATATCTTATGATTT+AGG | - | chr1.4:66579858-66579877 | MS.gene40622:intron | 15.0% |
| !! | TACAAATTCTTGATTAATAA+AGG | + | chr1.4:66579515-66579534 | None:intergenic | 15.0% |
| !! | TCATAAGATATACATTATTT+AGG | + | chr1.4:66579855-66579874 | None:intergenic | 15.0% |
| !!! | AACAAAAACAAATTTTTATG+TGG | + | chr1.4:66578567-66578586 | None:intergenic | 15.0% |
| !!! | AATAGACAAAATATATTTTC+TGG | + | chr1.4:66582043-66582062 | None:intergenic | 15.0% |
| !!! | AGTATTAATTTGAGTTATAA+AGG | + | chr1.4:66580172-66580191 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTGCTTATAATTT+AGG | + | chr1.4:66580228-66580247 | None:intergenic | 15.0% |
| !!! | ATCTTTGAAATAAGTTTTAT+AGG | + | chr1.4:66580422-66580441 | None:intergenic | 15.0% |
| !!! | GATCTTTTTTCTTATAATTT+GGG | + | chr1.4:66580262-66580281 | None:intergenic | 15.0% |
| !!! | GTATTAATTTGAGTTATAAA+GGG | + | chr1.4:66580171-66580190 | None:intergenic | 15.0% |
| !!! | TAACTTGTAGAAAATTTAAT+TGG | - | chr1.4:66578660-66578679 | MS.gene40622:intron | 15.0% |
| !!! | TGATCTTTTTTCTTATAATT+TGG | + | chr1.4:66580263-66580282 | None:intergenic | 15.0% |
| !!! | TTAAATTTTCTACAAGTTAA+AGG | + | chr1.4:66578659-66578678 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTGCTTATAATAT+GGG | - | chr1.4:66580499-66580518 | MS.gene40622:CDS | 15.0% |
| !!! | TTTTTTTGTTGCTTATAATA+TGG | - | chr1.4:66580498-66580517 | MS.gene40622:CDS | 15.0% |
| !! | AGTAACCTATGTAATAAAAT+GGG | + | chr1.4:66580837-66580856 | None:intergenic | 20.0% |
| !! | ATGTATTGTATCAAACAATA+AGG | + | chr1.4:66580721-66580740 | None:intergenic | 20.0% |
| !! | ATTTATCATACAATGATAAG+TGG | - | chr1.4:66581894-66581913 | MS.gene40622:CDS | 20.0% |
| !! | CAATAAGGTAATAATATTTG+TGG | + | chr1.4:66580706-66580725 | None:intergenic | 20.0% |
| !! | TAATGAAAGAAAATGAGTTA+TGG | + | chr1.4:66579968-66579987 | None:intergenic | 20.0% |
| !! | TGAAATAGACTTAAGAAATA+TGG | - | chr1.4:66577605-66577624 | MS.gene40622:intron | 20.0% |
| !!! | AAAAGGTATCAATTTTTCTA+AGG | - | chr1.4:66581466-66581485 | MS.gene40622:intron | 20.0% |
| !!! | ATACAATTTTAGATCTTCTT+TGG | - | chr1.4:66577887-66577906 | MS.gene40622:intron | 20.0% |
| !!! | TATTAGTGTAGTTTTTTTAG+AGG | - | chr1.4:66581254-66581273 | MS.gene40622:intron | 20.0% |
| !!! | TCTTTTGTTTTTAGATCAAA+AGG | - | chr1.4:66578970-66578989 | MS.gene40622:intron | 20.0% |
| !!! | TGTTATTTATAATGTATGGT+AGG | - | chr1.4:66582096-66582115 | MS.gene40622:intron | 20.0% |
| !!! | TTGAAATAAGTTTTATAGGA+AGG | + | chr1.4:66580418-66580437 | None:intergenic | 20.0% |
| !!! | TTTAAAAAATTTTCCCCAAT+GGG | + | chr1.4:66577754-66577773 | None:intergenic | 20.0% |
| !!! | TTTATCTCATTTTCAACAAA+TGG | + | chr1.4:66580766-66580785 | None:intergenic | 20.0% |
| !!! | TTTTTCTAAGGTGAATTTTA+TGG | - | chr1.4:66581478-66581497 | MS.gene40622:intron | 20.0% |
| !!! | TTTTTGCTTATAATTTAGGA+CGG | + | chr1.4:66580224-66580243 | None:intergenic | 20.0% |
| !!! | TTTTTTTAGCTATGAAAGTT+GGG | + | chr1.4:66580863-66580882 | None:intergenic | 20.0% |
| ! | AAAAAATAGGGAAAAACATG+TGG | - | chr1.4:66580950-66580969 | MS.gene40622:CDS | 25.0% |
| ! | AATATGTTAAGGAGAAACAA+TGG | - | chr1.4:66578127-66578146 | MS.gene40622:intron | 25.0% |
| ! | ACAAGTTTAATAAAAACCTG+TGG | + | chr1.4:66579283-66579302 | None:intergenic | 25.0% |
| ! | ACTAGAGAAAATTTAATTCC+GGG | - | chr1.4:66577858-66577877 | MS.gene40622:intron | 25.0% |
| ! | AGATCTTTAAGTCCTAATAT+GGG | + | chr1.4:66581960-66581979 | None:intergenic | 25.0% |
| ! | ATATTATTAGCATCAAGCAA+AGG | + | chr1.4:66582127-66582146 | None:intergenic | 25.0% |
| ! | CACTAGAGAAAATTTAATTC+CGG | - | chr1.4:66577857-66577876 | MS.gene40622:intron | 25.0% |
| ! | GAGTAACCTATGTAATAAAA+TGG | + | chr1.4:66580838-66580857 | None:intergenic | 25.0% |
| ! | GATAATAATGTACCCATATT+AGG | - | chr1.4:66581945-66581964 | MS.gene40622:CDS | 25.0% |
| ! | GTAGAAAATTTAATTGGAAG+AGG | - | chr1.4:66578666-66578685 | MS.gene40622:intron | 25.0% |
| ! | TAACTACATAACAAATTCCA+GGG | + | chr1.4:66581628-66581647 | None:intergenic | 25.0% |
| ! | TAGAGGTTATTACTTATTAG+TGG | - | chr1.4:66581271-66581290 | MS.gene40622:intron | 25.0% |
| ! | TCTTCTGTATACAATCTTAT+TGG | - | chr1.4:66579459-66579478 | MS.gene40622:intron | 25.0% |
| ! | TTAACTACATAACAAATTCC+AGG | + | chr1.4:66581629-66581648 | None:intergenic | 25.0% |
| ! | TTATTTGATAGACCTCAAAA+GGG | - | chr1.4:66582073-66582092 | MS.gene40622:CDS | 25.0% |
| ! | TTTAGATAAACCTGACTTAT+TGG | - | chr1.4:66581542-66581561 | MS.gene40622:intron | 25.0% |
| ! | TTTATTTGATAGACCTCAAA+AGG | - | chr1.4:66582072-66582091 | MS.gene40622:CDS | 25.0% |
| ! | TTTGACTAAGAGGAAAATAT+TGG | + | chr1.4:66581511-66581530 | None:intergenic | 25.0% |
| !! | AAAACTGATGTTTACTCTTT+TGG | - | chr1.4:66579747-66579766 | MS.gene40622:intron | 25.0% |
| !! | AATTGTGTTTTATGTACTCA+TGG | - | chr1.4:66578155-66578174 | MS.gene40622:intron | 25.0% |
| !! | ATGAAATGACTCAGTTATTT+TGG | + | chr1.4:66580120-66580139 | None:intergenic | 25.0% |
| !! | GATTACCCATTTTATTACAT+AGG | - | chr1.4:66580829-66580848 | MS.gene40622:CDS | 25.0% |
| !! | GGTGTAAAAACAATTTTCAT+TGG | + | chr1.4:66580397-66580416 | None:intergenic | 25.0% |
| !! | GTTTAAAAAATTTTCCCCAA+TGG | + | chr1.4:66577755-66577774 | None:intergenic | 25.0% |
| !! | TCAAAACATTATCTTTTCCA+AGG | - | chr1.4:66580310-66580329 | MS.gene40622:intron | 25.0% |
| !! | TGTATCATAACTCGATATTT+TGG | - | chr1.4:66578099-66578118 | MS.gene40622:intron | 25.0% |
| !! | TTATAAATAACACCCTTTTG+AGG | + | chr1.4:66582088-66582107 | None:intergenic | 25.0% |
| !! | TTGTACAGATTTGTGATTTT+GGG | - | chr1.4:66579530-66579549 | MS.gene40622:intron | 25.0% |
| !! | TTTGTACAGATTTGTGATTT+TGG | - | chr1.4:66579529-66579548 | MS.gene40622:intron | 25.0% |
| !!! | AGGGTGTTATTTATAATGTA+TGG | - | chr1.4:66582092-66582111 | MS.gene40622:intron | 25.0% |
| !!! | CACAATCTTTCTTCTTTTTT+TGG | - | chr1.4:66579488-66579507 | MS.gene40622:intron | 25.0% |
| !!! | CTTTCATTTTTTTGACTAAG+AGG | + | chr1.4:66581521-66581540 | None:intergenic | 25.0% |
| !!! | CTTTGCATTTAATTTTTCCT+TGG | + | chr1.4:66580330-66580349 | None:intergenic | 25.0% |
| !!! | GAATTATTTCTATACTTGCT+TGG | - | chr1.4:66578031-66578050 | MS.gene40622:intron | 25.0% |
| !!! | GTTTTTTTAGCTATGAAAGT+TGG | + | chr1.4:66580864-66580883 | None:intergenic | 25.0% |
| !!! | TATTTCATTTGAGTTGTGTA+CGG | - | chr1.4:66581164-66581183 | MS.gene40622:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr1.4:66580119-66580138 | None:intergenic | 25.0% |
| !!! | TGTTCATAAGTTTTTTTTCC+AGG | - | chr1.4:66578305-66578324 | MS.gene40622:intron | 25.0% |
| !!! | TTATTGACTTGACAAAAACA+AGG | + | chr1.4:66581924-66581943 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTCAAGTCAATA+AGG | - | chr1.4:66581923-66581942 | MS.gene40622:CDS | 25.0% |
| AACTAAGTAGACTGAATTAG+GGG | + | chr1.4:66581818-66581837 | None:intergenic | 30.0% | |
| AACTACATAACAAATTCCAG+GGG | + | chr1.4:66581627-66581646 | None:intergenic | 30.0% | |
| AAGGTGGAGAAAATTTAACA+CGG | - | chr1.4:66581037-66581056 | MS.gene40622:intron | 30.0% | |
| AATGGTTCAGTTATTATGGA+CGG | + | chr1.4:66580081-66580100 | None:intergenic | 30.0% | |
| ACAAGCTCAAATAATCCAAA+CGG | + | chr1.4:66578220-66578239 | None:intergenic | 30.0% | |
| AGAAACGAAACATTCTCATA+AGG | - | chr1.4:66578531-66578550 | MS.gene40622:intron | 30.0% | |
| ATTTGCATGAGAATTGTCAA+AGG | - | chr1.4:66579200-66579219 | MS.gene40622:intron | 30.0% | |
| CAAAAGATATTGTTAGCTAC+TGG | + | chr1.4:66579435-66579454 | None:intergenic | 30.0% | |
| CAATTGAAGGAATAGAAGTT+AGG | + | chr1.4:66577803-66577822 | None:intergenic | 30.0% | |
| CAGATCTTTAAGTCCTAATA+TGG | + | chr1.4:66581961-66581980 | None:intergenic | 30.0% | |
| CATAATATGTCCACATTTGA+AGG | - | chr1.4:66579586-66579605 | MS.gene40622:intron | 30.0% | |
| CATAGAAAGCTTAAATAACC+TGG | + | chr1.4:66578326-66578345 | None:intergenic | 30.0% | |
| CATCATCATATTACATACCA+TGG | + | chr1.4:66577959-66577978 | None:intergenic | 30.0% | |
| CATGGTATGTAATATGATGA+TGG | - | chr1.4:66577957-66577976 | MS.gene40622:intron | 30.0% | |
| CCACTATCATAAATGTAAAG+TGG | + | chr1.4:66580541-66580560 | None:intergenic | 30.0% | |
| CCACTTTACATTTATGATAG+TGG | - | chr1.4:66580538-66580557 | MS.gene40622:CDS | 30.0% | |
| CTAAAATTGTATAGATTGCC+CGG | + | chr1.4:66577879-66577898 | None:intergenic | 30.0% | |
| CTAACTTCTATTCCTTCAAT+TGG | - | chr1.4:66577801-66577820 | MS.gene40622:intron | 30.0% | |
| CTTCAAATGTGGACATATTA+TGG | + | chr1.4:66579588-66579607 | None:intergenic | 30.0% | |
| CTTGTTCATCAGTTATAATG+AGG | - | chr1.4:66579298-66579317 | MS.gene40622:intron | 30.0% | |
| GAAAATTTAATTGGAAGAGG+TGG | - | chr1.4:66578669-66578688 | MS.gene40622:intron | 30.0% | |
| GAACTAAGTAGACTGAATTA+GGG | + | chr1.4:66581819-66581838 | None:intergenic | 30.0% | |
| GCTAGTAAATCAAAGAAGAT+AGG | - | chr1.4:66577470-66577489 | MS.gene40622:CDS | 30.0% | |
| GCTTGATGCTAATAATATCA+AGG | - | chr1.4:66582129-66582148 | MS.gene40622:intron | 30.0% | |
| GGTTATTACTTATTAGTGGA+AGG | - | chr1.4:66581275-66581294 | MS.gene40622:intron | 30.0% | |
| GTAATAAAATGGGTAATCAG+TGG | + | chr1.4:66580827-66580846 | None:intergenic | 30.0% | |
| TGCAAATGGTTCAGTTATTA+TGG | + | chr1.4:66580085-66580104 | None:intergenic | 30.0% | |
| TTGAAAGTTAAAAGTCCGTT+TGG | - | chr1.4:66578202-66578221 | MS.gene40622:intron | 30.0% | |
| ! | AAAAGGTACAAAGTTTCTCT+CGG | - | chr1.4:66579157-66579176 | MS.gene40622:intron | 30.0% |
| ! | AATTGTTGGTTGCATTTCTT+AGG | + | chr1.4:66577932-66577951 | None:intergenic | 30.0% |
| ! | ATACATGTGAAATGAGCTTT+TGG | - | chr1.4:66580632-66580651 | MS.gene40622:intron | 30.0% |
| ! | CTCATTTTCAACAAATGGAT+AGG | + | chr1.4:66580761-66580780 | None:intergenic | 30.0% |
| ! | TAAGTGCACTTGTTAAGTAT+TGG | + | chr1.4:66580572-66580591 | None:intergenic | 30.0% |
| ! | TATCTGTTATGCTACTTATG+TGG | - | chr1.4:66581854-66581873 | MS.gene40622:CDS | 30.0% |
| !! | AATCGATGTAAGGTCTTATT+TGG | + | chr1.4:66578484-66578503 | None:intergenic | 30.0% |
| !! | CTTTTCCATTTTGGTATCTT+TGG | + | chr1.4:66577831-66577850 | None:intergenic | 30.0% |
| !!! | ACTCAGAATTTTTTGCCTTT+GGG | - | chr1.4:66581782-66581801 | MS.gene40622:CDS | 30.0% |
| !!! | GGGACTTTTTTTTTTGCAAA+TGG | + | chr1.4:66580099-66580118 | None:intergenic | 30.0% |
| !!! | GGGGAAAATTTTTTAAACTG+TGG | - | chr1.4:66577757-66577776 | MS.gene40622:intron | 30.0% |
| !!! | TACTCAGAATTTTTTGCCTT+TGG | - | chr1.4:66581781-66581800 | MS.gene40622:CDS | 30.0% |
| !!! | TCCACCTTAACTATTTTTTC+TGG | + | chr1.4:66581025-66581044 | None:intergenic | 30.0% |
| !!! | TTTTGGAGCTCAATATGTTA+AGG | - | chr1.4:66578116-66578135 | MS.gene40622:intron | 30.0% |
| AAGTAGCATAACAGATACCA+GGG | + | chr1.4:66581851-66581870 | None:intergenic | 35.0% | |
| AGACATCTTGAATCGATGTA+AGG | + | chr1.4:66578494-66578513 | None:intergenic | 35.0% | |
| AGGAGTGAGTAAAAATGTCT+TGG | - | chr1.4:66581566-66581585 | MS.gene40622:intron | 35.0% | |
| AGGTTCAGATAAAACCAAGT+TGG | - | chr1.4:66579126-66579145 | MS.gene40622:intron | 35.0% | |
| ATATCTCATACCAACTACAC+AGG | + | chr1.4:66581310-66581329 | None:intergenic | 35.0% | |
| ATGAGCAATAACTCCTAACT+CGG | + | chr1.4:66578796-66578815 | None:intergenic | 35.0% | |
| CATCATCTTTCTCTTTCTCA+AGG | + | chr1.4:66577632-66577651 | None:intergenic | 35.0% | |
| CGAAACATTCTCATAAGGAT+TGG | - | chr1.4:66578536-66578555 | MS.gene40622:intron | 35.0% | |
| CTGTGAAGAAAATGACTACA+GGG | - | chr1.4:66578739-66578758 | MS.gene40622:intron | 35.0% | |
| GATAAACCTGACTTATTGGA+AGG | - | chr1.4:66581546-66581565 | MS.gene40622:intron | 35.0% | |
| GATGTTATTGATCCTTCTCT+TGG | - | chr1.4:66582151-66582170 | MS.gene40622:intron | 35.0% | |
| GCCAGAAAAAATAGTTAAGG+TGG | - | chr1.4:66581021-66581040 | MS.gene40622:CDS | 35.0% | |
| GCTCACGTTAACATAATTCA+AGG | + | chr1.4:66578069-66578088 | None:intergenic | 35.0% | |
| GGAACTAAGTAGACTGAATT+AGG | + | chr1.4:66581820-66581839 | None:intergenic | 35.0% | |
| GGAGCCAGAAAAAATAGTTA+AGG | - | chr1.4:66581018-66581037 | MS.gene40622:CDS | 35.0% | |
| GTAGTGAAAGTTGCATTGAA+AGG | - | chr1.4:66581661-66581680 | MS.gene40622:intron | 35.0% | |
| TAAAGTGGAATATACTCCCT+CGG | + | chr1.4:66580526-66580545 | None:intergenic | 35.0% | |
| TAAGTAGCATAACAGATACC+AGG | + | chr1.4:66581852-66581871 | None:intergenic | 35.0% | |
| TACTGTTGGAGATCATAACT+GGG | - | chr1.4:66579775-66579794 | MS.gene40622:intron | 35.0% | |
| TCATAGTTATCTCCAAGAGA+AGG | + | chr1.4:66582166-66582185 | None:intergenic | 35.0% | |
| TCTGTCAAACAAGTCATTTG+TGG | + | chr1.4:66579685-66579704 | None:intergenic | 35.0% | |
| TGAGAAAGAGAAAGATGATG+AGG | - | chr1.4:66577632-66577651 | MS.gene40622:intron | 35.0% | |
| TGTGTAAATGTAATAACCCC+TGG | - | chr1.4:66581608-66581627 | MS.gene40622:intron | 35.0% | |
| TTATGGTGAGTCAATTGTTC+TGG | + | chr1.4:66579571-66579590 | None:intergenic | 35.0% | |
| ! | AGTTTAGGACATGTTCTTCA+TGG | - | chr1.4:66578900-66578919 | MS.gene40622:intron | 35.0% |
| ! | CAGATAAAACCAAGTTGGAT+TGG | - | chr1.4:66579131-66579150 | MS.gene40622:intron | 35.0% |
| ! | TGAAAGTATACTGACCGATA+GGG | + | chr1.4:66579064-66579083 | None:intergenic | 35.0% |
| ! | TGCTTATAATTTAGGACGGA+GGG | + | chr1.4:66580220-66580239 | None:intergenic | 35.0% |
| ! | TTGAAAGTATACTGACCGAT+AGG | + | chr1.4:66579065-66579084 | None:intergenic | 35.0% |
| ! | TTGCTTATAATTTAGGACGG+AGG | + | chr1.4:66580221-66580240 | None:intergenic | 35.0% |
| !! | GTGCTTCTACTTTTCCATTT+TGG | + | chr1.4:66577840-66577859 | None:intergenic | 35.0% |
| !!! | AACTTGGTTTTATCTGAACC+TGG | + | chr1.4:66579127-66579146 | None:intergenic | 35.0% |
| !!! | CTCAGAATTTTTTGCCTTTG+GGG | - | chr1.4:66581783-66581802 | MS.gene40622:CDS | 35.0% |
| !!! | GGTTTTTCTGAGGTTTACAA+GGG | - | chr1.4:66578690-66578709 | MS.gene40622:intron | 35.0% |
| !!! | TGGTTTTTCTGAGGTTTACA+AGG | - | chr1.4:66578689-66578708 | MS.gene40622:intron | 35.0% |
| AAAAACACATGTGTCTGCAG+GGG | - | chr1.4:66579989-66580008 | MS.gene40622:CDS | 40.0% | |
| AAACCAGTTGTTCGAATTCG+AGG | - | chr1.4:66577721-66577740 | MS.gene40622:intron | 40.0% | |
| AACCAGTTGTTCGAATTCGA+GGG | - | chr1.4:66577722-66577741 | MS.gene40622:intron | 40.0% | |
| AACTATGACCAAGGACAGAT+GGG | - | chr1.4:66582178-66582197 | MS.gene40622:intron | 40.0% | |
| ACAAAAACACATGTGTCTGC+AGG | - | chr1.4:66579987-66580006 | MS.gene40622:CDS | 40.0% | |
| ACACATATAGCACACACACA+CGG | + | chr1.4:66580910-66580929 | None:intergenic | 40.0% | |
| AGCCTTTAACACAAGCTTCT+AGG | + | chr1.4:66577674-66577693 | None:intergenic | 40.0% | |
| AGTAGCATAACAGATACCAG+GGG | + | chr1.4:66581850-66581869 | None:intergenic | 40.0% | |
| ATATTGCATGCATGGCATAG+TGG | - | chr1.4:66579719-66579738 | MS.gene40622:intron | 40.0% | |
| ATCTTTGGCACACCAATTGA+AGG | + | chr1.4:66577816-66577835 | None:intergenic | 40.0% | |
| ATGCCATGCATGCAATATTC+AGG | + | chr1.4:66579717-66579736 | None:intergenic | 40.0% | |
| ATTCCTTCACGATGTATTCC+AGG | - | chr1.4:66579106-66579125 | MS.gene40622:intron | 40.0% | |
| CAAAAACACATGTGTCTGCA+GGG | - | chr1.4:66579988-66580007 | MS.gene40622:CDS | 40.0% | |
| CAGCTATTAGTTGTCCATCT+TGG | + | chr1.4:66578722-66578741 | None:intergenic | 40.0% | |
| CATACCATGGCTGAAATTGT+TGG | + | chr1.4:66577946-66577965 | None:intergenic | 40.0% | |
| CCAACAAGCTTTGCAGTATT+AGG | + | chr1.4:66578828-66578847 | None:intergenic | 40.0% | |
| CCTAATACTGCAAAGCTTGT+TGG | - | chr1.4:66578825-66578844 | MS.gene40622:intron | 40.0% | |
| CTACTGTTGGAGATCATAAC+TGG | - | chr1.4:66579774-66579793 | MS.gene40622:intron | 40.0% | |
| CTTATGTGGGGAAAAAACTG+AGG | + | chr1.4:66579933-66579952 | None:intergenic | 40.0% | |
| CTTGGAGATAACTATGACCA+AGG | - | chr1.4:66582169-66582188 | MS.gene40622:intron | 40.0% | |
| CTTGTTGGATGTTGTGTAGA+GGG | - | chr1.4:66578840-66578859 | MS.gene40622:intron | 40.0% | |
| GAAGCTTGTGTTAAAGGCTT+TGG | - | chr1.4:66577675-66577694 | MS.gene40622:intron | 40.0% | |
| GATGCACAATATGTGTGTGA+GGG | + | chr1.4:66579025-66579044 | None:intergenic | 40.0% | |
| GATGCATGTTGGAGCTATAT+GGG | + | chr1.4:66580985-66581004 | None:intergenic | 40.0% | |
| GCTGTGAAGAAAATGACTAC+AGG | - | chr1.4:66578738-66578757 | MS.gene40622:intron | 40.0% | |
| GTCCTAGAAGCTTGTGTTAA+AGG | - | chr1.4:66577669-66577688 | MS.gene40622:intron | 40.0% | |
| GTCTTCGAATTGTCTACACT+GGG | - | chr1.4:66578876-66578895 | MS.gene40622:intron | 40.0% | |
| GTGTACACTGCAACTTATGT+GGG | + | chr1.4:66579946-66579965 | None:intergenic | 40.0% | |
| GTGTGCCAAAGATACCAAAA+TGG | - | chr1.4:66577823-66577842 | MS.gene40622:intron | 40.0% | |
| GTTCAGTTATTATGGACGGA+GGG | + | chr1.4:66580077-66580096 | None:intergenic | 40.0% | |
| TAACTATGACCAAGGACAGA+TGG | - | chr1.4:66582177-66582196 | MS.gene40622:intron | 40.0% | |
| TCTCCTGAATATTGCATGCA+TGG | - | chr1.4:66579711-66579730 | MS.gene40622:intron | 40.0% | |
| TGATGCACAATATGTGTGTG+AGG | + | chr1.4:66579026-66579045 | None:intergenic | 40.0% | |
| TGCTTATAATATGGGACCGA+GGG | - | chr1.4:66580507-66580526 | MS.gene40622:CDS | 40.0% | |
| TGTACACTGCAACTTATGTG+GGG | + | chr1.4:66579945-66579964 | None:intergenic | 40.0% | |
| TGTCTTCGAATTGTCTACAC+TGG | - | chr1.4:66578875-66578894 | MS.gene40622:intron | 40.0% | |
| TTGCATTTCTTAGGTCAGAG+AGG | + | chr1.4:66577923-66577942 | None:intergenic | 40.0% | |
| TTGCTTATAATATGGGACCG+AGG | - | chr1.4:66580506-66580525 | MS.gene40622:CDS | 40.0% | |
| TTGTCTACACTGGGAAGTTT+AGG | - | chr1.4:66578885-66578904 | MS.gene40622:intron | 40.0% | |
| ! | CCAAGTTGGATTGGAGTAAA+AGG | - | chr1.4:66579140-66579159 | MS.gene40622:intron | 40.0% |
| ! | CCACATTTGAAGGCACATTT+GGG | - | chr1.4:66579596-66579615 | MS.gene40622:intron | 40.0% |
| ! | CCTTTTACTCCAATCCAACT+TGG | + | chr1.4:66579143-66579162 | None:intergenic | 40.0% |
| ! | TCCACATTTGAAGGCACATT+TGG | - | chr1.4:66579595-66579614 | MS.gene40622:intron | 40.0% |
| !! | CACAGAGAATTTTGATCCAC+AGG | - | chr1.4:66579264-66579283 | MS.gene40622:intron | 40.0% |
| !!! | AGAATTTTTTGCCTTTGGGG+TGG | - | chr1.4:66581786-66581805 | MS.gene40622:CDS | 40.0% |
| !!! | AGCTTTTGGCTCAGTTAATC+CGG | - | chr1.4:66580646-66580665 | MS.gene40622:intron | 40.0% |
| !!! | CTCTTTTGGTGTTCTACTGT+TGG | - | chr1.4:66579761-66579780 | MS.gene40622:intron | 40.0% |
| AGCACAGATGAAAAGACAGC+TGG | - | chr1.4:66578762-66578781 | MS.gene40622:intron | 45.0% | |
| ATCCAGACTTTAGGTGCATG+TGG | - | chr1.4:66580025-66580044 | MS.gene40622:intron | 45.0% | |
| CCACTTGTGTTAGACCCTAT+CGG | - | chr1.4:66579047-66579066 | MS.gene40622:intron | 45.0% | |
| CCCAAATGTGCCTTCAAATG+TGG | + | chr1.4:66579599-66579618 | None:intergenic | 45.0% | |
| CTCACTCCTTCCAATAAGTC+AGG | + | chr1.4:66581555-66581574 | None:intergenic | 45.0% | |
| GAACCTGGAATACATCGTGA+AGG | + | chr1.4:66579112-66579131 | None:intergenic | 45.0% | |
| GACTTGTGAGACTGTTTGCT+TGG | - | chr1.4:66578260-66578279 | MS.gene40622:intron | 45.0% | |
| GAGATTGTCTCCTGTGTAGT+TGG | - | chr1.4:66581297-66581316 | MS.gene40622:intron | 45.0% | |
| GCAACCAACAATTTCAGCCA+TGG | - | chr1.4:66577939-66577958 | MS.gene40622:intron | 45.0% | |
| GGAATTGAACTCAGTACTCG+AGG | - | chr1.4:66578991-66579010 | MS.gene40622:intron | 45.0% | |
| GGATGCATGTTGGAGCTATA+TGG | + | chr1.4:66580986-66581005 | None:intergenic | 45.0% | |
| GGTGTACACTGCAACTTATG+TGG | + | chr1.4:66579947-66579966 | None:intergenic | 45.0% | |
| GGTTCAGTTATTATGGACGG+AGG | + | chr1.4:66580078-66580097 | None:intergenic | 45.0% | |
| GTTTCTCTCGGAATTGCTGA+TGG | - | chr1.4:66579169-66579188 | MS.gene40622:intron | 45.0% | |
| TAAGACATCCCATCTGTCCT+TGG | + | chr1.4:66582189-66582208 | None:intergenic | 45.0% | |
| TACAAGGGTTGTCTCCAAGA+TGG | - | chr1.4:66578705-66578724 | MS.gene40622:intron | 45.0% | |
| TTGTATTACTCCATCCGTCC+CGG | + | chr1.4:66580668-66580687 | None:intergenic | 45.0% | |
| ! | GAACAACTGGTTTCAGACTC+AGG | + | chr1.4:66577714-66577733 | None:intergenic | 45.0% |
| ! | GCTTGTTGGATGTTGTGTAG+AGG | - | chr1.4:66578839-66578858 | MS.gene40622:intron | 45.0% |
| ! | GTGATTTTGGGCTTGCAAAG+TGG | - | chr1.4:66579542-66579561 | MS.gene40622:intron | 45.0% |
| ! | TGGAAGAGGTGGTTTTTCTG+AGG | - | chr1.4:66578680-66578699 | MS.gene40622:intron | 45.0% |
| !!! | GCTTTTGGCTCAGTTAATCC+GGG | - | chr1.4:66580647-66580666 | MS.gene40622:intron | 45.0% |
| !! | ATATATTATTATAAATGAAA+CGG | - | chr1.4:66581409-66581428 | MS.gene40622:intron | 5.0% |
| CAGGGATGGATCCAGACTTT+AGG | - | chr1.4:66580016-66580035 | MS.gene40622:intron | 50.0% | |
| CATAACAGATACCAGGGGCA+GGG | + | chr1.4:66581845-66581864 | None:intergenic | 50.0% | |
| CATAACTGGGCGTAAGGCTT+TGG | - | chr1.4:66579788-66579807 | MS.gene40622:intron | 50.0% | |
| CCGATAGGGTCTAACACAAG+TGG | + | chr1.4:66579050-66579069 | None:intergenic | 50.0% | |
| CTCCACATGCACCTAAAGTC+TGG | + | chr1.4:66580030-66580049 | None:intergenic | 50.0% | |
| GCAGACAAGTCTCGTGACAT+GGG | - | chr1.4:66579818-66579837 | MS.gene40622:intron | 50.0% | |
| GCTTGTTCTGCTTCTGCTCA+AGG | - | chr1.4:66577503-66577522 | MS.gene40622:CDS | 50.0% | |
| GGAGATCATAACTGGGCGTA+AGG | - | chr1.4:66579782-66579801 | MS.gene40622:intron | 50.0% | |
| TGCAGACAAGTCTCGTGACA+TGG | - | chr1.4:66579817-66579836 | MS.gene40622:intron | 50.0% | |
| TTGGCTCAGTTAATCCGGGA+CGG | - | chr1.4:66580651-66580670 | MS.gene40622:intron | 50.0% | |
| ! | CTCATGCGAGGGCGTAAAAT+AGG | + | chr1.4:66582244-66582263 | None:intergenic | 50.0% |
| ! | GATGATGAGGCATCTCCAAG+AGG | - | chr1.4:66577645-66577664 | MS.gene40622:intron | 50.0% |
| !! | ACAGAAGTGCCTAGCTCTGT+AGG | - | chr1.4:66581729-66581748 | MS.gene40622:intron | 50.0% |
| !! | CAAGCTTCTAGGACTCCTCT+TGG | + | chr1.4:66577663-66577682 | None:intergenic | 50.0% |
| !! | CAGAAGTGCCTAGCTCTGTA+GGG | - | chr1.4:66581730-66581749 | MS.gene40622:intron | 50.0% |
| !! | GCTGGCTTTCTATCCGAGTT+AGG | - | chr1.4:66578780-66578799 | MS.gene40622:intron | 50.0% |
| AACACATGTGTCTGCAGGGG+CGG | - | chr1.4:66579992-66580011 | MS.gene40622:CDS | 55.0% | |
| ATACGCCTCCCTACAGAGCT+AGG | + | chr1.4:66581741-66581760 | None:intergenic | 55.0% | |
| CGCCCTCGAATTCGAACAAC+TGG | + | chr1.4:66577727-66577746 | None:intergenic | 55.0% | |
| CTCAGTTAATCCGGGACGGA+TGG | - | chr1.4:66580655-66580674 | MS.gene40622:intron | 55.0% | |
| GCATAACAGATACCAGGGGC+AGG | + | chr1.4:66581846-66581865 | None:intergenic | 55.0% | |
| TCCAACATGCATCCGTCCCT+GGG | - | chr1.4:66580992-66581011 | MS.gene40622:CDS | 55.0% | |
| !! | AAGTGCCTAGCTCTGTAGGG+AGG | - | chr1.4:66581733-66581752 | MS.gene40622:intron | 55.0% |
| ACAGATACCAGGGGCAGGGA+CGG | + | chr1.4:66581841-66581860 | None:intergenic | 60.0% | |
| CAACATGCATCCGTCCCTGG+GGG | - | chr1.4:66580994-66581013 | MS.gene40622:CDS | 60.0% | |
| CCAACATGCATCCGTCCCTG+GGG | - | chr1.4:66580993-66581012 | MS.gene40622:CDS | 60.0% | |
| CTCCAACATGCATCCGTCCC+TGG | - | chr1.4:66580991-66581010 | MS.gene40622:CDS | 60.0% | |
| ! | ATTCGAGGGCGCGATCCCAT+TGG | - | chr1.4:66577736-66577755 | MS.gene40622:intron | 60.0% |
| ! | TTCGAGGGCGCGATCCCATT+GGG | - | chr1.4:66577737-66577756 | MS.gene40622:intron | 60.0% |
| !! | AGGGGTACTAGCCACCCCAA+AGG | + | chr1.4:66581800-66581819 | None:intergenic | 60.0% |
| !!! | TTTTTCTGGCTCCGCCCCCA+GGG | + | chr1.4:66581011-66581030 | None:intergenic | 60.0% |
| !!! | TTTTTTCTGGCTCCGCCCCC+AGG | + | chr1.4:66581012-66581031 | None:intergenic | 60.0% |
| ATGTGTCTGCAGGGGCGGAC+AGG | - | chr1.4:66579997-66580016 | MS.gene40622:intron | 65.0% | |
| CCCCAGGGACGGATGCATGT+TGG | + | chr1.4:66580996-66581015 | None:intergenic | 65.0% | |
| CTTAGTTCCGTCCCTGCCCC+TGG | - | chr1.4:66581831-66581850 | MS.gene40622:CDS | 65.0% | |
| TGTGTCTGCAGGGGCGGACA+GGG | - | chr1.4:66579998-66580017 | MS.gene40622:intron | 65.0% | |
| ! | TCGAGGGCGCGATCCCATTG+GGG | - | chr1.4:66577738-66577757 | MS.gene40622:intron | 65.0% |
| CATGCATCCGTCCCTGGGGG+CGG | - | chr1.4:66580997-66581016 | MS.gene40622:CDS | 70.0% | |
| TCTGCAGGGGCGGACAGGGA+TGG | - | chr1.4:66580002-66580021 | MS.gene40622:intron | 70.0% | |
| ! | TCTGGCTCCGCCCCCAGGGA+CGG | + | chr1.4:66581007-66581026 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 66577451 | 66582267 | 66577451 | ID=MS.gene40622 |
| chr1.4 | mRNA | 66577451 | 66582267 | 66577451 | ID=MS.gene40622.t1;Parent=MS.gene40622 |
| chr1.4 | exon | 66582194 | 66582267 | 66582194 | ID=MS.gene40622.t1.exon1;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66582194 | 66582267 | 66582194 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| chr1.4 | exon | 66581758 | 66582105 | 66581758 | ID=MS.gene40622.t1.exon2;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66581758 | 66582105 | 66581758 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| chr1.4 | exon | 66580797 | 66581048 | 66580797 | ID=MS.gene40622.t1.exon3;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66580797 | 66581048 | 66580797 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| chr1.4 | exon | 66580433 | 66580590 | 66580433 | ID=MS.gene40622.t1.exon4;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66580433 | 66580590 | 66580433 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| chr1.4 | exon | 66580101 | 66580180 | 66580101 | ID=MS.gene40622.t1.exon5;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66580101 | 66580180 | 66580101 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| chr1.4 | exon | 66579879 | 66580014 | 66579879 | ID=MS.gene40622.t1.exon6;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66579879 | 66580014 | 66579879 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| chr1.4 | exon | 66577451 | 66577600 | 66577451 | ID=MS.gene40622.t1.exon7;Parent=MS.gene40622.t1 |
| chr1.4 | CDS | 66577451 | 66577600 | 66577451 | ID=cds.MS.gene40622.t1;Parent=MS.gene40622.t1 |
| Gene Sequence |
| Protein sequence |
