Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40782.t1 | RHN80862.1 | 96.6 | 642 | 21 | 1 | 1 | 641 | 1 | 642 | 6.10E-241 | 843.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40782.t1 | Q86L99 | 38.2 | 76 | 39 | 2 | 155 | 223 | 348 | 422 | 4.8e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40782.t1 | A0A396JTJ5 | 96.6 | 642 | 21 | 1 | 1 | 641 | 1 | 642 | 4.4e-241 | 843.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04985 | MS.gene40782 | 0.814811 | 1.27E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene40782 | 0.816289 | 5.97E-52 | -1.69E-46 |
| MS.gene050297 | MS.gene40782 | 0.823855 | 1.11E-53 | -1.69E-46 |
| MS.gene051263 | MS.gene40782 | 0.843676 | 1.21E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene40782 | 0.85241 | 4.70E-61 | -1.69E-46 |
| MS.gene051648 | MS.gene40782 | 0.809441 | 1.89E-50 | -1.69E-46 |
| MS.gene051781 | MS.gene40782 | 0.801695 | 7.97E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene40782 | 0.831311 | 1.79E-55 | -1.69E-46 |
| MS.gene056335 | MS.gene40782 | 0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene06057 | MS.gene40782 | 0.805145 | 1.54E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40782.t1 | MTR_1g084120 | 96.417 | 642 | 22 | 1 | 1 | 641 | 1 | 642 | 0.0 | 1276 |
| MS.gene40782.t1 | MTR_4g109680 | 36.482 | 307 | 178 | 9 | 22 | 314 | 19 | 322 | 1.43e-51 | 188 |
| MS.gene40782.t1 | MTR_4g109680 | 32.283 | 254 | 158 | 7 | 72 | 315 | 19 | 268 | 1.94e-36 | 145 |
| MS.gene40782.t1 | MTR_4g109680 | 32.000 | 225 | 143 | 5 | 15 | 232 | 65 | 286 | 5.27e-31 | 128 |
| MS.gene40782.t1 | MTR_7g113200 | 35.018 | 277 | 166 | 8 | 15 | 284 | 174 | 443 | 2.36e-37 | 145 |
| MS.gene40782.t1 | MTR_7g113200 | 30.583 | 206 | 131 | 6 | 11 | 209 | 276 | 476 | 5.64e-22 | 100 |
| MS.gene40782.t1 | MTR_7g113200 | 34.122 | 296 | 179 | 9 | 15 | 303 | 174 | 460 | 2.80e-37 | 148 |
| MS.gene40782.t1 | MTR_7g113200 | 30.622 | 209 | 133 | 6 | 11 | 212 | 276 | 479 | 1.46e-22 | 102 |
| MS.gene40782.t1 | MTR_1g090740 | 30.124 | 322 | 202 | 10 | 15 | 318 | 15 | 331 | 1.18e-34 | 138 |
| MS.gene40782.t1 | MTR_1g492850 | 29.766 | 299 | 186 | 7 | 22 | 299 | 14 | 309 | 4.59e-30 | 124 |
| MS.gene40782.t1 | MTR_1g492850 | 31.203 | 266 | 162 | 6 | 14 | 260 | 57 | 320 | 9.43e-29 | 120 |
| MS.gene40782.t1 | MTR_1g492850 | 32.927 | 246 | 146 | 8 | 71 | 301 | 13 | 254 | 5.45e-28 | 118 |
| MS.gene40782.t1 | MTR_1g492850 | 32.367 | 207 | 130 | 4 | 122 | 321 | 14 | 217 | 4.00e-25 | 109 |
| MS.gene40782.t1 | MTR_1g492850 | 29.766 | 299 | 186 | 7 | 22 | 299 | 14 | 309 | 5.36e-30 | 124 |
| MS.gene40782.t1 | MTR_1g492850 | 31.203 | 266 | 162 | 6 | 14 | 260 | 57 | 320 | 1.12e-28 | 120 |
| MS.gene40782.t1 | MTR_1g492850 | 32.927 | 246 | 146 | 8 | 71 | 301 | 13 | 254 | 7.27e-28 | 118 |
| MS.gene40782.t1 | MTR_1g492850 | 32.367 | 207 | 130 | 4 | 122 | 321 | 14 | 217 | 5.97e-25 | 109 |
| MS.gene40782.t1 | MTR_2g019860 | 31.716 | 268 | 166 | 8 | 15 | 270 | 76 | 338 | 7.81e-29 | 122 |
| MS.gene40782.t1 | MTR_2g019860 | 27.907 | 258 | 175 | 6 | 57 | 305 | 68 | 323 | 1.89e-26 | 115 |
| MS.gene40782.t1 | MTR_2g019860 | 33.987 | 153 | 92 | 3 | 174 | 317 | 81 | 233 | 1.24e-18 | 90.5 |
| MS.gene40782.t1 | MTR_2g019860 | 27.778 | 216 | 138 | 7 | 112 | 315 | 73 | 282 | 1.27e-18 | 90.5 |
| MS.gene40782.t1 | MTR_2g019860 | 32.692 | 156 | 94 | 4 | 11 | 158 | 232 | 384 | 9.30e-14 | 75.1 |
| MS.gene40782.t1 | MTR_4g119100 | 28.287 | 251 | 167 | 5 | 65 | 305 | 83 | 330 | 7.15e-27 | 116 |
| MS.gene40782.t1 | MTR_4g119100 | 29.213 | 267 | 174 | 7 | 15 | 270 | 83 | 345 | 2.65e-25 | 111 |
| MS.gene40782.t1 | MTR_4g119100 | 33.987 | 153 | 92 | 3 | 174 | 317 | 88 | 240 | 4.76e-18 | 89.0 |
| MS.gene40782.t1 | MTR_4g119100 | 32.484 | 157 | 97 | 4 | 11 | 160 | 239 | 393 | 5.44e-13 | 72.8 |
| MS.gene40782.t1 | MTR_4g119100 | 28.287 | 251 | 167 | 5 | 65 | 305 | 84 | 331 | 1.07e-26 | 115 |
| MS.gene40782.t1 | MTR_4g119100 | 29.889 | 271 | 167 | 9 | 15 | 270 | 84 | 346 | 2.51e-25 | 111 |
| MS.gene40782.t1 | MTR_4g119100 | 33.987 | 153 | 92 | 3 | 174 | 317 | 89 | 241 | 3.45e-18 | 89.4 |
| MS.gene40782.t1 | MTR_4g119100 | 32.484 | 157 | 97 | 4 | 11 | 160 | 240 | 394 | 5.69e-13 | 72.4 |
| MS.gene40782.t1 | MTR_4g119100 | 28.287 | 251 | 167 | 5 | 65 | 305 | 84 | 331 | 1.14e-26 | 115 |
| MS.gene40782.t1 | MTR_4g119100 | 29.889 | 271 | 167 | 9 | 15 | 270 | 84 | 346 | 2.65e-25 | 111 |
| MS.gene40782.t1 | MTR_4g119100 | 33.987 | 153 | 92 | 3 | 174 | 317 | 89 | 241 | 3.60e-18 | 89.4 |
| MS.gene40782.t1 | MTR_4g119100 | 32.484 | 157 | 97 | 4 | 11 | 160 | 240 | 394 | 5.59e-13 | 72.4 |
| MS.gene40782.t1 | MTR_4g132120 | 29.643 | 280 | 184 | 9 | 29 | 299 | 279 | 554 | 3.52e-26 | 115 |
| MS.gene40782.t1 | MTR_4g132120 | 30.556 | 216 | 143 | 4 | 89 | 300 | 293 | 505 | 1.35e-21 | 100 |
| MS.gene40782.t1 | MTR_4g132120 | 30.531 | 226 | 152 | 4 | 25 | 249 | 333 | 554 | 9.09e-20 | 94.7 |
| MS.gene40782.t1 | MTR_4g132120 | 28.492 | 179 | 118 | 5 | 23 | 199 | 384 | 554 | 2.74e-14 | 77.0 |
| MS.gene40782.t1 | MTR_1g492850 | 31.455 | 213 | 131 | 5 | 61 | 260 | 5 | 215 | 3.53e-22 | 99.8 |
| MS.gene40782.t1 | MTR_1g492850 | 29.630 | 216 | 127 | 7 | 12 | 208 | 4 | 213 | 1.73e-16 | 82.4 |
| MS.gene40782.t1 | MTR_1g492850 | 29.000 | 200 | 125 | 5 | 114 | 299 | 8 | 204 | 2.40e-16 | 82.0 |
| MS.gene40782.t1 | MTR_1g492850 | 33.582 | 134 | 81 | 3 | 176 | 301 | 16 | 149 | 7.99e-13 | 71.2 |
| MS.gene40782.t1 | MTR_2g069030 | 24.847 | 326 | 211 | 9 | 15 | 316 | 8 | 323 | 5.29e-20 | 92.0 |
| MS.gene40782.t1 | MTR_2g036510 | 32.414 | 290 | 160 | 19 | 60 | 321 | 278 | 559 | 1.35e-18 | 90.1 |
| MS.gene40782.t1 | MTR_2g036510 | 27.003 | 337 | 214 | 16 | 8 | 316 | 276 | 608 | 1.33e-15 | 80.9 |
| MS.gene40782.t1 | MTR_8g105590 | 28.834 | 326 | 199 | 15 | 22 | 319 | 311 | 631 | 5.16e-18 | 88.6 |
| MS.gene40782.t1 | MTR_8g105590 | 29.818 | 275 | 162 | 16 | 24 | 273 | 364 | 632 | 2.38e-17 | 86.3 |
| MS.gene40782.t1 | MTR_8g105590 | 29.514 | 288 | 171 | 16 | 60 | 321 | 298 | 579 | 5.32e-17 | 85.1 |
| MS.gene40782.t1 | MTR_4g007980 | 29.057 | 265 | 149 | 12 | 25 | 252 | 172 | 434 | 5.40e-16 | 81.3 |
| MS.gene40782.t1 | MTR_4g007980 | 28.902 | 346 | 188 | 17 | 25 | 315 | 118 | 460 | 8.57e-16 | 80.9 |
| MS.gene40782.t1 | MTR_1g107265 | 26.190 | 252 | 154 | 8 | 52 | 274 | 100 | 348 | 5.84e-16 | 82.0 |
| MS.gene40782.t1 | MTR_1g107265 | 26.087 | 253 | 155 | 8 | 52 | 275 | 100 | 349 | 7.30e-16 | 81.6 |
| MS.gene40782.t1 | MTR_1g089370 | 29.457 | 258 | 153 | 7 | 15 | 246 | 86 | 340 | 6.45e-15 | 79.0 |
| MS.gene40782.t1 | MTR_1g089370 | 25.969 | 258 | 161 | 9 | 70 | 300 | 22 | 276 | 2.27e-14 | 77.4 |
| MS.gene40782.t1 | MTR_1g089370 | 31.068 | 206 | 127 | 9 | 55 | 250 | 76 | 276 | 1.97e-12 | 70.9 |
| MS.gene40782.t1 | MTR_2g087530 | 26.715 | 277 | 174 | 7 | 15 | 263 | 154 | 429 | 3.24e-14 | 76.6 |
| MS.gene40782.t1 | MTR_2g087530 | 27.536 | 276 | 169 | 10 | 53 | 299 | 142 | 415 | 8.22e-13 | 72.4 |
| MS.gene40782.t1 | MTR_2g087530 | 29.091 | 220 | 118 | 9 | 125 | 307 | 81 | 299 | 1.49e-12 | 71.6 |
| MS.gene40782.t1 | MTR_2g087530 | 26.909 | 275 | 172 | 7 | 15 | 261 | 42 | 315 | 5.21e-14 | 76.3 |
| MS.gene40782.t1 | MTR_2g087530 | 27.622 | 286 | 174 | 11 | 43 | 299 | 22 | 303 | 4.49e-13 | 73.2 |
| MS.gene40782.t1 | MTR_4g050540 | 27.106 | 273 | 185 | 9 | 53 | 313 | 147 | 417 | 5.26e-12 | 69.7 |
| MS.gene40782.t1 | MTR_4g071265 | 70.455 | 44 | 13 | 0 | 597 | 640 | 2 | 45 | 1.44e-11 | 60.8 |
| MS.gene40782.t1 | MTR_4g071285 | 58.333 | 60 | 15 | 1 | 333 | 382 | 18 | 77 | 4.50e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40782.t1 | AT1G74150 | 37.025 | 316 | 184 | 8 | 23 | 325 | 17 | 330 | 1.88e-55 | 198 |
| MS.gene40782.t1 | AT1G74150 | 30.742 | 283 | 176 | 8 | 14 | 284 | 61 | 335 | 2.22e-31 | 129 |
| MS.gene40782.t1 | AT1G74150 | 37.097 | 310 | 180 | 8 | 23 | 319 | 17 | 324 | 4.05e-55 | 197 |
| MS.gene40782.t1 | AT1G74150 | 31.618 | 272 | 160 | 10 | 63 | 315 | 1 | 265 | 2.65e-36 | 144 |
| MS.gene40782.t1 | AT1G74150 | 30.742 | 283 | 177 | 8 | 14 | 284 | 61 | 336 | 3.78e-31 | 129 |
| MS.gene40782.t1 | AT1G74150 | 37.097 | 310 | 180 | 8 | 23 | 319 | 17 | 324 | 4.55e-55 | 197 |
| MS.gene40782.t1 | AT1G74150 | 31.618 | 272 | 160 | 10 | 63 | 315 | 1 | 265 | 2.87e-36 | 144 |
| MS.gene40782.t1 | AT1G74150 | 30.742 | 283 | 177 | 8 | 14 | 284 | 61 | 336 | 3.91e-31 | 129 |
| MS.gene40782.t1 | AT1G18610 | 36.964 | 303 | 176 | 8 | 25 | 314 | 22 | 322 | 8.35e-55 | 196 |
| MS.gene40782.t1 | AT1G18610 | 31.250 | 272 | 164 | 9 | 63 | 315 | 1 | 268 | 7.41e-33 | 134 |
| MS.gene40782.t1 | AT1G18610 | 32.759 | 232 | 146 | 5 | 12 | 236 | 62 | 290 | 9.43e-31 | 127 |
| MS.gene40782.t1 | AT1G18610 | 36.964 | 303 | 176 | 8 | 25 | 314 | 22 | 322 | 8.35e-55 | 196 |
| MS.gene40782.t1 | AT1G18610 | 31.250 | 272 | 164 | 9 | 63 | 315 | 1 | 268 | 7.41e-33 | 134 |
| MS.gene40782.t1 | AT1G18610 | 32.759 | 232 | 146 | 5 | 12 | 236 | 62 | 290 | 9.43e-31 | 127 |
| MS.gene40782.t1 | AT1G74150 | 38.462 | 260 | 148 | 6 | 65 | 314 | 46 | 303 | 1.48e-47 | 176 |
| MS.gene40782.t1 | AT1G74150 | 30.612 | 294 | 181 | 9 | 3 | 284 | 38 | 320 | 2.03e-31 | 129 |
| MS.gene40782.t1 | AT1G74150 | 32.227 | 211 | 132 | 6 | 112 | 315 | 43 | 249 | 2.75e-31 | 129 |
| MS.gene40782.t1 | AT1G74150 | 33.654 | 104 | 64 | 1 | 215 | 313 | 42 | 145 | 1.23e-13 | 74.3 |
| MS.gene40782.t1 | AT3G05420 | 33.113 | 302 | 182 | 8 | 15 | 299 | 171 | 469 | 1.54e-38 | 152 |
| MS.gene40782.t1 | AT3G05420 | 27.170 | 265 | 177 | 7 | 64 | 316 | 170 | 430 | 2.58e-25 | 111 |
| MS.gene40782.t1 | AT3G05420 | 33.113 | 302 | 182 | 8 | 15 | 299 | 172 | 470 | 1.57e-38 | 152 |
| MS.gene40782.t1 | AT3G05420 | 27.170 | 265 | 177 | 7 | 64 | 316 | 171 | 431 | 2.61e-25 | 111 |
| MS.gene40782.t1 | AT5G27630 | 30.874 | 366 | 231 | 10 | 15 | 364 | 172 | 531 | 7.56e-37 | 147 |
| MS.gene40782.t1 | AT5G27630 | 34.701 | 268 | 160 | 6 | 15 | 270 | 172 | 436 | 8.74e-37 | 146 |
| MS.gene40782.t1 | AT5G27630 | 34.701 | 268 | 160 | 6 | 15 | 270 | 172 | 436 | 9.44e-37 | 146 |
| MS.gene40782.t1 | AT5G27630 | 30.874 | 366 | 231 | 10 | 15 | 364 | 172 | 531 | 1.28e-36 | 145 |
| MS.gene40782.t1 | AT5G04420 | 29.129 | 333 | 204 | 11 | 15 | 320 | 22 | 349 | 4.58e-30 | 125 |
| MS.gene40782.t1 | AT5G04420 | 27.815 | 302 | 182 | 10 | 64 | 333 | 21 | 318 | 6.58e-23 | 103 |
| MS.gene40782.t1 | AT5G04420 | 29.129 | 333 | 204 | 11 | 15 | 320 | 22 | 349 | 4.58e-30 | 125 |
| MS.gene40782.t1 | AT5G04420 | 27.815 | 302 | 182 | 10 | 64 | 333 | 21 | 318 | 6.58e-23 | 103 |
| MS.gene40782.t1 | AT5G04420 | 29.129 | 333 | 204 | 11 | 15 | 320 | 22 | 349 | 4.58e-30 | 125 |
| MS.gene40782.t1 | AT5G04420 | 27.815 | 302 | 182 | 10 | 64 | 333 | 21 | 318 | 6.58e-23 | 103 |
| MS.gene40782.t1 | AT2G36360 | 32.331 | 266 | 159 | 6 | 14 | 260 | 57 | 320 | 1.95e-28 | 120 |
| MS.gene40782.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 2.12e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.07e-26 | 114 |
| MS.gene40782.t1 | AT2G36360 | 32.331 | 266 | 159 | 6 | 14 | 260 | 57 | 320 | 2.45e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 2.48e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.43e-26 | 114 |
| MS.gene40782.t1 | AT2G36360 | 32.331 | 266 | 159 | 6 | 14 | 260 | 57 | 320 | 2.45e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 2.48e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.43e-26 | 114 |
| MS.gene40782.t1 | AT2G36360 | 31.955 | 266 | 160 | 6 | 14 | 260 | 57 | 320 | 2.50e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 3.11e-28 | 119 |
| MS.gene40782.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.79e-26 | 114 |
| MS.gene40782.t1 | AT4G04670 | 36.364 | 176 | 109 | 3 | 125 | 300 | 322 | 494 | 7.22e-27 | 117 |
| MS.gene40782.t1 | AT4G04670 | 28.205 | 234 | 163 | 4 | 67 | 299 | 314 | 543 | 4.87e-24 | 108 |
| MS.gene40782.t1 | AT4G04670 | 30.342 | 234 | 156 | 4 | 19 | 249 | 314 | 543 | 1.13e-23 | 107 |
| MS.gene40782.t1 | AT4G04670 | 29.570 | 186 | 125 | 4 | 15 | 199 | 363 | 543 | 2.86e-11 | 67.4 |
| MS.gene40782.t1 | AT5G18590 | 28.137 | 263 | 178 | 6 | 65 | 318 | 66 | 326 | 7.71e-27 | 116 |
| MS.gene40782.t1 | AT5G18590 | 30.943 | 265 | 170 | 7 | 15 | 269 | 66 | 327 | 6.62e-25 | 110 |
| MS.gene40782.t1 | AT5G18590 | 28.372 | 215 | 138 | 8 | 112 | 315 | 63 | 272 | 3.24e-19 | 92.4 |
| MS.gene40782.t1 | AT5G18590 | 28.137 | 263 | 178 | 6 | 65 | 318 | 66 | 326 | 7.71e-27 | 116 |
| MS.gene40782.t1 | AT5G18590 | 30.943 | 265 | 170 | 7 | 15 | 269 | 66 | 327 | 6.62e-25 | 110 |
| MS.gene40782.t1 | AT5G18590 | 28.372 | 215 | 138 | 8 | 112 | 315 | 63 | 272 | 3.24e-19 | 92.4 |
| MS.gene40782.t1 | AT2G36360 | 28.247 | 308 | 188 | 8 | 22 | 299 | 14 | 318 | 1.81e-26 | 114 |
| MS.gene40782.t1 | AT2G36360 | 31.273 | 275 | 159 | 7 | 14 | 260 | 57 | 329 | 7.90e-26 | 112 |
| MS.gene40782.t1 | AT2G36360 | 31.765 | 255 | 146 | 9 | 71 | 301 | 13 | 263 | 1.25e-24 | 108 |
| MS.gene40782.t1 | AT5G48180 | 26.183 | 317 | 206 | 12 | 15 | 311 | 8 | 316 | 5.33e-22 | 97.8 |
| MS.gene40782.t1 | AT5G48180 | 28.000 | 250 | 169 | 7 | 64 | 311 | 7 | 247 | 8.39e-18 | 85.5 |
| MS.gene40782.t1 | AT5G48180 | 29.126 | 206 | 142 | 3 | 114 | 319 | 7 | 208 | 3.65e-17 | 83.6 |
| MS.gene40782.t1 | AT1G68050 | 29.794 | 339 | 203 | 15 | 8 | 319 | 285 | 615 | 3.52e-19 | 92.0 |
| MS.gene40782.t1 | AT3G07720 | 26.250 | 240 | 167 | 5 | 64 | 299 | 9 | 242 | 5.56e-19 | 89.0 |
| MS.gene40782.t1 | AT3G07720 | 25.828 | 302 | 189 | 9 | 114 | 389 | 9 | 301 | 4.44e-18 | 86.3 |
| MS.gene40782.t1 | AT3G07720 | 24.024 | 333 | 218 | 11 | 5 | 313 | 1 | 322 | 4.04e-17 | 83.6 |
| MS.gene40782.t1 | AT3G07720 | 25.275 | 273 | 179 | 9 | 15 | 268 | 62 | 328 | 5.89e-13 | 70.9 |
| MS.gene40782.t1 | AT1G74150 | 34.722 | 144 | 88 | 3 | 176 | 313 | 9 | 152 | 2.09e-18 | 88.2 |
| MS.gene40782.t1 | AT1G74150 | 30.682 | 176 | 109 | 7 | 115 | 284 | 2 | 170 | 6.78e-14 | 74.3 |
| MS.gene40782.t1 | AT1G74150 | 34.722 | 144 | 88 | 3 | 176 | 313 | 9 | 152 | 2.09e-18 | 88.2 |
| MS.gene40782.t1 | AT1G74150 | 30.682 | 176 | 109 | 7 | 115 | 284 | 2 | 170 | 6.78e-14 | 74.3 |
| MS.gene40782.t1 | AT5G57360 | 29.499 | 339 | 205 | 18 | 8 | 317 | 273 | 606 | 7.02e-18 | 88.2 |
| MS.gene40782.t1 | AT2G18915 | 27.941 | 340 | 205 | 15 | 8 | 316 | 264 | 594 | 1.87e-17 | 86.7 |
| MS.gene40782.t1 | AT2G18915 | 27.941 | 340 | 205 | 15 | 8 | 316 | 274 | 604 | 2.28e-17 | 86.3 |
| MS.gene40782.t1 | AT2G33070 | 28.033 | 239 | 164 | 5 | 64 | 299 | 153 | 386 | 1.57e-16 | 83.2 |
| MS.gene40782.t1 | AT2G33070 | 25.229 | 218 | 145 | 5 | 37 | 242 | 229 | 440 | 1.76e-13 | 73.6 |
| MS.gene40782.t1 | AT2G33070 | 24.316 | 329 | 213 | 10 | 8 | 311 | 147 | 464 | 8.51e-12 | 68.2 |
| MS.gene40782.t1 | AT2G33070 | 28.033 | 239 | 164 | 5 | 64 | 299 | 153 | 386 | 1.57e-16 | 83.2 |
| MS.gene40782.t1 | AT2G33070 | 25.229 | 218 | 145 | 5 | 37 | 242 | 229 | 440 | 1.76e-13 | 73.6 |
| MS.gene40782.t1 | AT2G33070 | 24.316 | 329 | 213 | 10 | 8 | 311 | 147 | 464 | 8.51e-12 | 68.2 |
| MS.gene40782.t1 | AT1G51550 | 31.071 | 280 | 143 | 17 | 17 | 252 | 166 | 439 | 2.17e-16 | 82.8 |
| MS.gene40782.t1 | AT1G51550 | 28.105 | 306 | 176 | 17 | 25 | 298 | 120 | 413 | 8.07e-16 | 80.9 |
| MS.gene40782.t1 | AT5G57360 | 28.972 | 321 | 194 | 18 | 8 | 299 | 273 | 588 | 8.25e-16 | 81.6 |
| MS.gene40782.t1 | AT5G50310 | 25.000 | 272 | 164 | 9 | 35 | 278 | 92 | 351 | 3.15e-15 | 79.7 |
| MS.gene40782.t1 | AT5G50310 | 26.866 | 201 | 124 | 7 | 31 | 211 | 128 | 325 | 5.91e-11 | 66.2 |
| MS.gene40782.t1 | AT2G33070 | 27.801 | 241 | 164 | 6 | 64 | 299 | 153 | 388 | 3.50e-15 | 79.0 |
| MS.gene40782.t1 | AT2G33070 | 25.229 | 218 | 145 | 5 | 37 | 242 | 231 | 442 | 1.91e-13 | 73.6 |
| MS.gene40782.t1 | AT2G27210 | 27.106 | 273 | 185 | 9 | 53 | 313 | 152 | 422 | 3.57e-15 | 80.1 |
| MS.gene40782.t1 | AT2G27210 | 27.778 | 270 | 166 | 7 | 22 | 263 | 171 | 439 | 9.13e-15 | 78.6 |
| MS.gene40782.t1 | AT1G08420 | 27.076 | 277 | 173 | 7 | 15 | 263 | 175 | 450 | 7.27e-15 | 79.0 |
| MS.gene40782.t1 | AT1G08420 | 26.740 | 273 | 186 | 9 | 53 | 313 | 163 | 433 | 1.21e-14 | 78.2 |
| MS.gene40782.t1 | AT3G16390 | 28.395 | 243 | 156 | 7 | 65 | 299 | 153 | 385 | 6.09e-14 | 75.1 |
| MS.gene40782.t1 | AT3G16390 | 26.269 | 335 | 210 | 13 | 5 | 315 | 143 | 464 | 4.96e-13 | 72.0 |
| MS.gene40782.t1 | AT3G16390 | 28.395 | 243 | 156 | 7 | 65 | 299 | 153 | 385 | 6.09e-14 | 75.1 |
| MS.gene40782.t1 | AT3G16390 | 26.269 | 335 | 210 | 13 | 5 | 315 | 143 | 464 | 4.96e-13 | 72.0 |
| MS.gene40782.t1 | AT3G16400 | 26.426 | 333 | 207 | 12 | 5 | 311 | 143 | 463 | 6.32e-14 | 75.1 |
| MS.gene40782.t1 | AT3G16400 | 26.426 | 333 | 207 | 12 | 5 | 311 | 143 | 463 | 6.32e-14 | 75.1 |
| MS.gene40782.t1 | AT2G27210 | 26.667 | 270 | 185 | 9 | 53 | 313 | 152 | 417 | 9.38e-14 | 75.5 |
| MS.gene40782.t1 | AT2G27210 | 27.715 | 267 | 165 | 8 | 22 | 263 | 171 | 434 | 6.90e-13 | 72.8 |
| MS.gene40782.t1 | AT1G03445 | 27.586 | 290 | 179 | 12 | 45 | 314 | 71 | 349 | 2.06e-13 | 73.9 |
| MS.gene40782.t1 | AT1G03445 | 30.337 | 178 | 103 | 7 | 125 | 283 | 28 | 203 | 2.25e-13 | 73.9 |
| MS.gene40782.t1 | AT1G03445 | 27.820 | 266 | 169 | 10 | 15 | 261 | 86 | 347 | 3.40e-13 | 73.6 |
| MS.gene40782.t1 | AT1G03445 | 30.337 | 178 | 103 | 7 | 125 | 283 | 28 | 203 | 2.63e-13 | 73.9 |
| MS.gene40782.t1 | AT1G03445 | 27.586 | 290 | 179 | 12 | 45 | 314 | 71 | 349 | 2.90e-13 | 73.6 |
| MS.gene40782.t1 | AT1G03445 | 27.820 | 266 | 169 | 10 | 15 | 261 | 86 | 347 | 5.12e-13 | 72.8 |
| MS.gene40782.t1 | AT3G16410 | 25.630 | 238 | 171 | 4 | 64 | 299 | 301 | 534 | 3.24e-13 | 73.2 |
| MS.gene40782.t1 | AT3G16410 | 25.126 | 199 | 135 | 3 | 37 | 226 | 377 | 570 | 1.57e-12 | 71.2 |
| MS.gene40782.t1 | AT3G16410 | 25.526 | 333 | 218 | 12 | 5 | 315 | 292 | 616 | 1.70e-12 | 70.9 |
| MS.gene40782.t1 | AT1G08420 | 26.296 | 270 | 186 | 9 | 53 | 313 | 163 | 428 | 3.43e-13 | 73.6 |
| MS.gene40782.t1 | AT1G08420 | 27.007 | 274 | 172 | 8 | 15 | 263 | 175 | 445 | 6.04e-13 | 72.8 |
| MS.gene40782.t1 | AT4G03080 | 26.275 | 255 | 158 | 9 | 73 | 300 | 25 | 276 | 3.51e-13 | 73.6 |
| MS.gene40782.t1 | AT4G03080 | 26.230 | 305 | 191 | 9 | 15 | 287 | 86 | 388 | 3.41e-11 | 67.0 |
| MS.gene40782.t1 | AT1G54040 | 31.429 | 140 | 89 | 4 | 167 | 300 | 8 | 146 | 2.22e-11 | 66.2 |
| MS.gene40782.t1 | AT1G54040 | 25.781 | 256 | 166 | 9 | 64 | 299 | 8 | 259 | 3.27e-11 | 65.9 |
| MS.gene40782.t1 | AT1G54040 | 32.824 | 131 | 81 | 4 | 176 | 300 | 11 | 140 | 4.38e-11 | 65.1 |
| MS.gene40782.t1 | AT1G54040 | 25.506 | 247 | 161 | 8 | 72 | 299 | 11 | 253 | 5.44e-11 | 65.1 |
Find 144 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACATACACACTTGTTTA+TGG | 0.163401 | 1.2:+59393312 | MS.gene40782:CDS |
| GCAAAGTCTTTGGAAGTTAT+TGG | 0.209745 | 1.2:+59393645 | MS.gene40782:CDS |
| GAGCAAGTAGTGGTTGCTTT+AGG | 0.236125 | 1.2:-59394864 | None:intergenic |
| CTTGATGGAAACAAACAATT+TGG | 0.239299 | 1.2:-59394754 | None:intergenic |
| GGTGGTATCCCTTCACATTT+AGG | 0.241948 | 1.2:-59392324 | None:intergenic |
| ATGTGGAAGTCTTGGGAAAA+TGG | 0.242978 | 1.2:+59393891 | MS.gene40782:CDS |
| AACGTTATTGCAACGACATT+TGG | 0.261258 | 1.2:+59393285 | MS.gene40782:CDS |
| ATGTTTGGACCTTGACAAAA+TGG | 0.261385 | 1.2:+59392140 | MS.gene40782:CDS |
| TTTAGGCTTAATCCATTCTT+TGG | 0.268713 | 1.2:-59392307 | None:intergenic |
| ATTGATGGAGCCTTTGATTC+AGG | 0.269269 | 1.2:+59394565 | MS.gene40782:CDS |
| AGCCACATTGCTTTCTTCTT+AGG | 0.272073 | 1.2:-59391536 | None:intergenic |
| TTATCGGGGTGCAAAGTCTT+TGG | 0.295106 | 1.2:+59393635 | MS.gene40782:CDS |
| GGTCACTCTGCTTGCTTCTC+TGG | 0.304115 | 1.2:+59391599 | MS.gene40782:CDS |
| CGACCGTCTCCAATCATAAA+AGG | 0.307200 | 1.2:+59394886 | MS.gene40782:CDS |
| CGACCGTGTCAATTTGATTC+AGG | 0.313607 | 1.2:+59393938 | MS.gene40782:CDS |
| AGTCATTGTACTCTTGCTAT+TGG | 0.314706 | 1.2:+59392522 | MS.gene40782:CDS |
| GACACCGATATTGTTATATA+TGG | 0.328819 | 1.2:+59393398 | MS.gene40782:CDS |
| CAAGCATTATTTCCACTTGC+AGG | 0.349704 | 1.2:-59394985 | None:intergenic |
| CAGGAGTGACTTGCAAGGTT+TGG | 0.352406 | 1.2:+59394945 | MS.gene40782:CDS |
| TGTGGAAGTCTTGGGAAAAT+GGG | 0.354487 | 1.2:+59393892 | MS.gene40782:CDS |
| GTCATTGTACTCTTGCTATT+GGG | 0.354949 | 1.2:+59392523 | MS.gene40782:CDS |
| GAAGTTCTTGGCAAAATTGA+TGG | 0.359155 | 1.2:+59394550 | MS.gene40782:CDS |
| AGCAAGTAGTGGTTGCTTTA+GGG | 0.360149 | 1.2:-59394863 | None:intergenic |
| TAGATTGGTACCGAAGTTCT+TGG | 0.360287 | 1.2:+59394538 | MS.gene40782:intron |
| ACCAGAAAATTTCGCGTATC+GGG | 0.384937 | 1.2:+59393864 | MS.gene40782:intron |
| ACGTTATTGCAACGACATTT+GGG | 0.386709 | 1.2:+59393286 | MS.gene40782:CDS |
| AAGGTTCTTCACCAGGAGTC+AGG | 0.389468 | 1.2:+59392826 | MS.gene40782:CDS |
| TTCATAAGAGGCTGACTTGA+TGG | 0.394469 | 1.2:-59394769 | None:intergenic |
| GAATCCATGGCAGAAGCATT+TGG | 0.396548 | 1.2:-59394169 | None:intergenic |
| CGGGAATAATGTGGAAGTCT+TGG | 0.398146 | 1.2:+59393883 | MS.gene40782:CDS |
| AAATGGACATAACAACTTAT+CGG | 0.398694 | 1.2:+59393619 | MS.gene40782:CDS |
| TTATTTCAGGTATACATCAT+TGG | 0.403078 | 1.2:+59393248 | MS.gene40782:intron |
| AATGGACATAACAACTTATC+GGG | 0.405221 | 1.2:+59393620 | MS.gene40782:CDS |
| AACTCCATCTCATAGTTCTA+AGG | 0.405995 | 1.2:-59392458 | None:intergenic |
| ACATGATTTGAGTTCATAAG+AGG | 0.407121 | 1.2:-59394781 | None:intergenic |
| GATAAGTTGTTATGTCCATT+TGG | 0.409080 | 1.2:-59393617 | None:intergenic |
| TGAAGATATTGTTCTTGCTT+TGG | 0.410809 | 1.2:-59394328 | None:intergenic |
| GCATGACCTGCCCTGACTCC+TGG | 0.413772 | 1.2:-59392837 | None:intergenic |
| GGGAATAATGTGGAAGTCTT+GGG | 0.423116 | 1.2:+59393884 | MS.gene40782:CDS |
| TTGATCTTTACACCAAAGAA+TGG | 0.429246 | 1.2:+59392295 | MS.gene40782:CDS |
| CAAGGTTTGGCTTTAACACT+AGG | 0.430586 | 1.2:+59394958 | MS.gene40782:CDS |
| GGGAATAAGCTTATTGTGTA+TGG | 0.432274 | 1.2:+59392543 | MS.gene40782:CDS |
| AGGATTAAAACCTAAAACCT+TGG | 0.432402 | 1.2:-59391564 | None:intergenic |
| TATCCGCGTCCGGCAGGCTT+CGG | 0.433353 | 1.2:-59394394 | None:intergenic |
| CTAATGACTGCAGTAGTGAA+TGG | 0.440066 | 1.2:+59394592 | MS.gene40782:CDS |
| GTCTTGGGAAAATGGGGTTA+TGG | 0.445343 | 1.2:+59393899 | MS.gene40782:CDS |
| CAGGCTTCGGTTCTAAAGCT+TGG | 0.446872 | 1.2:-59394381 | None:intergenic |
| CCCGCCATATATAACAATAT+CGG | 0.451213 | 1.2:-59393402 | None:intergenic |
| CGATATCGCCGAGTCAAACT+AGG | 0.452268 | 1.2:+59394196 | MS.gene40782:CDS |
| TGAGTGTATCCGCGTCCGGC+AGG | 0.454398 | 1.2:-59394400 | None:intergenic |
| TGGAGCAAGGTTACTACAAC+AGG | 0.454699 | 1.2:+59392165 | MS.gene40782:CDS |
| TTCAACATCCCACACCTTTG+TGG | 0.462742 | 1.2:-59394062 | None:intergenic |
| TCAACAAGATCTTCATGTAA+TGG | 0.469515 | 1.2:+59394297 | MS.gene40782:CDS |
| TACCCGGAGAACATAAAATC+AGG | 0.479502 | 1.2:+59394926 | MS.gene40782:CDS |
| CAATGACTATCTCTAGGAAC+AGG | 0.483951 | 1.2:-59392507 | None:intergenic |
| ATGGAGATGAATGCTGAGAC+AGG | 0.490805 | 1.2:-59394111 | None:intergenic |
| GTGTTGAGTGTATCCGCGTC+CGG | 0.503593 | 1.2:-59394404 | None:intergenic |
| GTCCTACAAGAACAGCACTA+TGG | 0.503973 | 1.2:-59392212 | None:intergenic |
| CTTGCAGCAGAGCATCCAAA+TGG | 0.505763 | 1.2:+59393602 | MS.gene40782:CDS |
| TAATGACTGCAGTAGTGAAT+GGG | 0.507894 | 1.2:+59394593 | MS.gene40782:CDS |
| AGCAGTGAATGTTGGAACTA+AGG | 0.508106 | 1.2:+59392860 | MS.gene40782:CDS |
| TGAATAATCTATCAGGGAGC+AGG | 0.510071 | 1.2:+59394721 | MS.gene40782:intron |
| AGCCATAGTGCTGTTCTTGT+AGG | 0.510145 | 1.2:+59392210 | MS.gene40782:CDS |
| TCAAGAAAAGAAGACCATCC+TGG | 0.511840 | 1.2:+59393670 | MS.gene40782:CDS |
| GGATTAAAACCTAAAACCTT+GGG | 0.516565 | 1.2:-59391563 | None:intergenic |
| GACCAGAAAATTTCGCGTAT+CGG | 0.516872 | 1.2:+59393863 | MS.gene40782:intron |
| GGTCATGCAGCAGTGAATGT+TGG | 0.526745 | 1.2:+59392852 | MS.gene40782:CDS |
| TTCAGGTATACATCATTGGA+GGG | 0.528619 | 1.2:+59393252 | MS.gene40782:intron |
| TGAAACAATGACTTGGACTA+GGG | 0.529748 | 1.2:+59392614 | MS.gene40782:CDS |
| TCTTGTTGGTGGTGAAAGAC+TGG | 0.530082 | 1.2:+59392374 | MS.gene40782:CDS |
| AACACTAACAATTCATTCAA+AGG | 0.530492 | 1.2:-59393575 | None:intergenic |
| CAAATCATGTGGATAATTCG+AGG | 0.531788 | 1.2:+59394794 | MS.gene40782:CDS |
| TTGTCAAGTTGACAAGTGCT+TGG | 0.532756 | 1.2:-59394229 | None:intergenic |
| GAACCGAAGCCTGCCGGACG+CGG | 0.532959 | 1.2:+59394391 | MS.gene40782:CDS |
| TTTCAGGTATACATCATTGG+AGG | 0.533107 | 1.2:+59393251 | MS.gene40782:intron |
| TGGTCTCAACTTGATATACA+TGG | 0.535726 | 1.2:+59393332 | MS.gene40782:CDS |
| TTGTATCTACTCCGCCATCC+AGG | 0.538216 | 1.2:-59393688 | None:intergenic |
| CCGATATTGTTATATATGGC+GGG | 0.538845 | 1.2:+59393402 | MS.gene40782:CDS |
| AGTCACACTGCTACTCTTGT+TGG | 0.540157 | 1.2:+59392360 | MS.gene40782:CDS |
| ATTGTGTATGGTGGAGATAG+TGG | 0.545972 | 1.2:+59392555 | MS.gene40782:CDS |
| CAAGAACAATATCTTCATGT+TGG | 0.548229 | 1.2:+59394334 | MS.gene40782:CDS |
| TGGATTAAGCCTAAATGTGA+AGG | 0.551727 | 1.2:+59392315 | MS.gene40782:CDS |
| TGTTCTTGATCAGATTGAGA+TGG | 0.553752 | 1.2:-59394130 | None:intergenic |
| GCTTTAGAACCGAAGCCTGC+CGG | 0.554277 | 1.2:+59394385 | MS.gene40782:CDS |
| TCTGATCAAGAACAGACTCC+AGG | 0.556028 | 1.2:+59394139 | MS.gene40782:CDS |
| GCGATATCGCTGAGAATCCA+TGG | 0.559368 | 1.2:-59394182 | None:intergenic |
| GTAGCAGTGTGACTTTCCCT+TGG | 0.559880 | 1.2:-59392351 | None:intergenic |
| GTATACATCATTGGAGGGGT+CGG | 0.560007 | 1.2:+59393257 | MS.gene40782:CDS |
| CATTAGAAAACCTGAATCAA+AGG | 0.560029 | 1.2:-59394575 | None:intergenic |
| AAAACCAAATGCTTCTGCCA+TGG | 0.560581 | 1.2:+59394165 | MS.gene40782:CDS |
| TTGAAACAATGACTTGGACT+AGG | 0.562915 | 1.2:+59392613 | MS.gene40782:CDS |
| ACCGATATTGTTATATATGG+CGG | 0.564182 | 1.2:+59393401 | MS.gene40782:CDS |
| GGCACATCACCTTTAACCTC+AGG | 0.564358 | 1.2:-59392486 | None:intergenic |
| GTGGAAGTCTTGGGAAAATG+GGG | 0.565975 | 1.2:+59393893 | MS.gene40782:CDS |
| TGACTTTCCCTTGGTGAAGG+TGG | 0.566581 | 1.2:-59392342 | None:intergenic |
| AGAGTACAATGACTATCTCT+AGG | 0.569296 | 1.2:-59392513 | None:intergenic |
| GTGTGACTTTCCCTTGGTGA+AGG | 0.574494 | 1.2:-59392345 | None:intergenic |
| ACACTAGGAGGGCCTGCAAG+TGG | 0.574524 | 1.2:+59394973 | MS.gene40782:CDS |
| AATAAGCTTATTGTGTATGG+TGG | 0.576597 | 1.2:+59392546 | MS.gene40782:CDS |
| AGGTTCTTCACCAGGAGTCA+GGG | 0.576841 | 1.2:+59392827 | MS.gene40782:CDS |
| TTGATATTGAAACAATGACT+TGG | 0.577584 | 1.2:+59392607 | MS.gene40782:CDS |
| GAGTGACCCCATCTTTGAGA+AGG | 0.578017 | 1.2:-59391584 | None:intergenic |
| GGTTTGGCTTTAACACTAGG+AGG | 0.578223 | 1.2:+59394961 | MS.gene40782:CDS |
| CACACTGCTACTCTTGTTGG+TGG | 0.578346 | 1.2:+59392363 | MS.gene40782:CDS |
| TAGACCTTAGAACTATGAGA+TGG | 0.585997 | 1.2:+59392454 | MS.gene40782:CDS |
| TGGACCTTGACAAAATGGAA+TGG | 0.587543 | 1.2:+59392145 | MS.gene40782:CDS |
| TCTTCACCAGGAGTCAGGGC+AGG | 0.593035 | 1.2:+59392831 | MS.gene40782:CDS |
| GAATTGCTGCCACAAAGGTG+TGG | 0.593293 | 1.2:+59394053 | MS.gene40782:CDS |
| CTATGGCTATCTCTAGGACC+TGG | 0.596063 | 1.2:-59392195 | None:intergenic |
| TTTAATCCTTCTCAAAGATG+GGG | 0.598086 | 1.2:+59391578 | MS.gene40782:CDS |
| GAAAAGAAGACCATCCTGGA+TGG | 0.600096 | 1.2:+59393674 | MS.gene40782:CDS |
| GTTTGGCTTTAACACTAGGA+GGG | 0.600809 | 1.2:+59394962 | MS.gene40782:CDS |
| ACAGCACTATGGCTATCTCT+AGG | 0.602607 | 1.2:-59392201 | None:intergenic |
| ACGCGGATACACTCAACACT+TGG | 0.606240 | 1.2:+59394408 | MS.gene40782:CDS |
| TTCGCGTATCGGGAATAATG+TGG | 0.607764 | 1.2:+59393874 | MS.gene40782:CDS |
| ATCTACTCCGCCATCCAGGA+TGG | 0.609038 | 1.2:-59393684 | None:intergenic |
| GAACTTCACAACAGAAGAGG+AGG | 0.609239 | 1.2:+59394029 | MS.gene40782:CDS |
| TCTTATGAACTCAAATCATG+TGG | 0.612751 | 1.2:+59394783 | MS.gene40782:CDS |
| GATAGTGGTGATCAGTATCA+TGG | 0.612803 | 1.2:+59392570 | MS.gene40782:CDS |
| CAGGAACTTCACAACAGAAG+AGG | 0.614241 | 1.2:+59394026 | MS.gene40782:intron |
| ACTACAACAGGTGAAAAGCC+AGG | 0.619726 | 1.2:+59392177 | MS.gene40782:CDS |
| TCTGACTTGTAGCAGGTGTG+GGG | 0.622977 | 1.2:+59393541 | MS.gene40782:intron |
| AGCAATGTGGCTGTATCCCA+AGG | 0.627800 | 1.2:+59391547 | MS.gene40782:CDS |
| GGATTAAGCCTAAATGTGAA+GGG | 0.630444 | 1.2:+59392316 | MS.gene40782:CDS |
| TCAGGTATACATCATTGGAG+GGG | 0.630931 | 1.2:+59393253 | MS.gene40782:intron |
| GAGGAGAATTGCTGCCACAA+AGG | 0.632549 | 1.2:+59394048 | MS.gene40782:CDS |
| TGACAAAATGGAATGGAGCA+AGG | 0.633271 | 1.2:+59392152 | MS.gene40782:CDS |
| AATTGCTGCCACAAAGGTGT+GGG | 0.636773 | 1.2:+59394054 | MS.gene40782:CDS |
| GGTTGCTTTAGGGCATAGCA+CGG | 0.638751 | 1.2:-59394853 | None:intergenic |
| GGAGACGGTCGAGCAAGTAG+TGG | 0.648193 | 1.2:-59394874 | None:intergenic |
| AAGAAGACCATCCTGGATGG+CGG | 0.653485 | 1.2:+59393677 | MS.gene40782:CDS |
| AGGGATACCACCTTCACCAA+GGG | 0.655838 | 1.2:+59392335 | MS.gene40782:CDS |
| TGGAGATGAATGCTGAGACA+GGG | 0.656111 | 1.2:-59394110 | None:intergenic |
| AAAATCAGGAGTGACTTGCA+AGG | 0.656845 | 1.2:+59394940 | MS.gene40782:CDS |
| CTACCTGAATCAAATTGACA+CGG | 0.661599 | 1.2:-59393941 | None:intergenic |
| ACTAATACAGTGTCTTTACC+CGG | 0.667635 | 1.2:+59394910 | MS.gene40782:CDS |
| GTATGAGAAAACCGTCCTTG+TGG | 0.675141 | 1.2:-59393362 | None:intergenic |
| AAGGGATACCACCTTCACCA+AGG | 0.676653 | 1.2:+59392334 | MS.gene40782:CDS |
| ATGGTCAACAGCCACAAGGA+CGG | 0.677236 | 1.2:+59393351 | MS.gene40782:CDS |
| ATCGGTGTCTGCAACAACAG+CGG | 0.678886 | 1.2:-59393384 | None:intergenic |
| ATACATGGTCAACAGCCACA+AGG | 0.682432 | 1.2:+59393347 | MS.gene40782:CDS |
| ATGGACATAACAACTTATCG+GGG | 0.694887 | 1.2:+59393621 | MS.gene40782:CDS |
| CTCCTAAGAAGAAAGCAATG+TGG | 0.723011 | 1.2:+59391534 | MS.gene40782:CDS |
| TGGCGGAGTAGATACAAACA+CGG | 0.767759 | 1.2:+59393694 | MS.gene40782:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGAAAATAATGATTTT+TGG | - | chr1.2:59392699-59392718 | None:intergenic | 10.0% |
| !! | TATATAGCATAAGTAATTAA+CGG | - | chr1.2:59393189-59393208 | None:intergenic | 15.0% |
| !! | TTAATTACTTATGCTATATA+TGG | + | chr1.2:59393189-59393208 | MS.gene40782:intron | 15.0% |
| !!! | AATCTTATAATTTGTTCATA+TGG | + | chr1.2:59392657-59392676 | MS.gene40782:intron | 15.0% |
| !! | AACAAATGAATAATCTATCA+GGG | + | chr1.2:59394715-59394734 | MS.gene40782:intron | 20.0% |
| !! | TAACAAATGAATAATCTATC+AGG | + | chr1.2:59394714-59394733 | MS.gene40782:intron | 20.0% |
| !! | TAAGATAGCAAAAATATGAT+TGG | - | chr1.2:59391982-59392001 | None:intergenic | 20.0% |
| !! | TTAAATTTGTAATGTTATGC+AGG | + | chr1.2:59394007-59394026 | MS.gene40782:intron | 20.0% |
| !!! | AAAGAACTAATAATGTGTTT+TGG | + | chr1.2:59393841-59393860 | MS.gene40782:intron | 20.0% |
| !!! | AAGACTTATGTATATTTTTG+GGG | + | chr1.2:59391622-59391641 | MS.gene40782:CDS | 20.0% |
| !!! | AATTTGAATTTTGAAAGCAA+AGG | - | chr1.2:59394439-59394458 | None:intergenic | 20.0% |
| !!! | ATAATTTGTTCATATGGAAA+TGG | + | chr1.2:59392663-59392682 | MS.gene40782:intron | 20.0% |
| !!! | GAAGACTTATGTATATTTTT+GGG | + | chr1.2:59391621-59391640 | MS.gene40782:CDS | 20.0% |
| !!! | TATGAATTTAGGAGTATTTT+AGG | - | chr1.2:59392958-59392977 | None:intergenic | 20.0% |
| !!! | TATTTATAGGAATTTGTTCT+AGG | - | chr1.2:59393013-59393032 | None:intergenic | 20.0% |
| !!! | TTCTCAAAAGTGTTATTTAT+AGG | - | chr1.2:59393026-59393045 | None:intergenic | 20.0% |
| ! | AAATGGACATAACAACTTAT+CGG | + | chr1.2:59393619-59393638 | MS.gene40782:CDS | 25.0% |
| ! | AACACTAACAATTCATTCAA+AGG | - | chr1.2:59393578-59393597 | None:intergenic | 25.0% |
| ! | ATAGGATAAAGCTAATTTGA+CGG | - | chr1.2:59393437-59393456 | None:intergenic | 25.0% |
| ! | TATATACACACTGTGTTTAA+TGG | + | chr1.2:59391686-59391705 | MS.gene40782:intron | 25.0% |
| ! | TCGTAAGTTTATTACTTCTT+TGG | + | chr1.2:59391724-59391743 | MS.gene40782:intron | 25.0% |
| ! | TTATGACAGTTGAAAAATCA+AGG | + | chr1.2:59392807-59392826 | MS.gene40782:intron | 25.0% |
| ! | TTGATATTGAAACAATGACT+TGG | + | chr1.2:59392607-59392626 | MS.gene40782:CDS | 25.0% |
| !! | GGAAGACTTATGTATATTTT+TGG | + | chr1.2:59391620-59391639 | MS.gene40782:CDS | 25.0% |
| !! | GTATTAGTTCCTTTTATGAT+TGG | - | chr1.2:59394898-59394917 | None:intergenic | 25.0% |
| !! | TTATTTCAGGTATACATCAT+TGG | + | chr1.2:59393248-59393267 | MS.gene40782:intron | 25.0% |
| !! | TTTTAATCCTTCTCAAAGAT+GGG | + | chr1.2:59391577-59391596 | MS.gene40782:CDS | 25.0% |
| !! | TTTTAGTGATGTACTATGTT+TGG | + | chr1.2:59392125-59392144 | MS.gene40782:CDS | 25.0% |
| !!! | AATAATGATTTTTGGTCACT+AGG | - | chr1.2:59392691-59392710 | None:intergenic | 25.0% |
| !!! | ATTGAGAAAAGAAAGTGTTT+TGG | - | chr1.2:59391856-59391875 | None:intergenic | 25.0% |
| !!! | ATTTAATTTTAGGGATGTTG+TGG | + | chr1.2:59392093-59392112 | MS.gene40782:intron | 25.0% |
| !!! | TTTGATTTTGAATCCTAGAT+TGG | + | chr1.2:59394523-59394542 | MS.gene40782:intron | 25.0% |
| AATAAGCTTATTGTGTATGG+TGG | + | chr1.2:59392546-59392565 | MS.gene40782:CDS | 30.0% | |
| AATGGACATAACAACTTATC+GGG | + | chr1.2:59393620-59393639 | MS.gene40782:CDS | 30.0% | |
| ACCGATATTGTTATATATGG+CGG | + | chr1.2:59393401-59393420 | MS.gene40782:CDS | 30.0% | |
| AGCAAATTTCAAAAGCTTAC+AGG | - | chr1.2:59394646-59394665 | None:intergenic | 30.0% | |
| AGGATTAAAACCTAAAACCT+TGG | - | chr1.2:59391567-59391586 | None:intergenic | 30.0% | |
| CAAGAACAATATCTTCATGT+TGG | + | chr1.2:59394334-59394353 | MS.gene40782:CDS | 30.0% | |
| CATTAGAAAACCTGAATCAA+AGG | - | chr1.2:59394578-59394597 | None:intergenic | 30.0% | |
| CTAGGAGAATAAAACAACAA+TGG | - | chr1.2:59392995-59393014 | None:intergenic | 30.0% | |
| CTCTTGTGATGATTTATTTC+AGG | + | chr1.2:59393235-59393254 | MS.gene40782:intron | 30.0% | |
| CTTGATGGAAACAAACAATT+TGG | - | chr1.2:59394757-59394776 | None:intergenic | 30.0% | |
| GACACCGATATTGTTATATA+TGG | + | chr1.2:59393398-59393417 | MS.gene40782:CDS | 30.0% | |
| GATAAGTTGTTATGTCCATT+TGG | - | chr1.2:59393620-59393639 | None:intergenic | 30.0% | |
| GGATTAAAACCTAAAACCTT+GGG | - | chr1.2:59391566-59391585 | None:intergenic | 30.0% | |
| GTTACATAAATCGTAGTACT+AGG | - | chr1.2:59394698-59394717 | None:intergenic | 30.0% | |
| TAAATCATCACAAGAGTAAG+TGG | - | chr1.2:59393231-59393250 | None:intergenic | 30.0% | |
| TAGGATAAAGCTAATTTGAC+GGG | - | chr1.2:59393436-59393455 | None:intergenic | 30.0% | |
| TCAACAAGATCTTCATGTAA+TGG | + | chr1.2:59394297-59394316 | MS.gene40782:CDS | 30.0% | |
| TCTTATGAACTCAAATCATG+TGG | + | chr1.2:59394783-59394802 | MS.gene40782:CDS | 30.0% | |
| TGAAGATATTGTTCTTGCTT+TGG | - | chr1.2:59394331-59394350 | None:intergenic | 30.0% | |
| TTGACATACACACTTGTTTA+TGG | + | chr1.2:59393312-59393331 | MS.gene40782:CDS | 30.0% | |
| TTGATCTTTACACCAAAGAA+TGG | + | chr1.2:59392295-59392314 | MS.gene40782:CDS | 30.0% | |
| TTGTCTTCAACTTCTATCTT+TGG | + | chr1.2:59391823-59391842 | MS.gene40782:intron | 30.0% | |
| TTTAATCCTTCTCAAAGATG+GGG | + | chr1.2:59391578-59391597 | MS.gene40782:CDS | 30.0% | |
| TTTAGGCTTAATCCATTCTT+TGG | - | chr1.2:59392310-59392329 | None:intergenic | 30.0% | |
| ! | ACATGATTTGAGTTCATAAG+AGG | - | chr1.2:59394784-59394803 | None:intergenic | 30.0% |
| ! | ATCAATTTTGCCAAGAACTT+CGG | - | chr1.2:59394551-59394570 | None:intergenic | 30.0% |
| ! | CATGTTGGTGAAGATAAAAA+AGG | + | chr1.2:59394349-59394368 | MS.gene40782:CDS | 30.0% |
| ! | GGACACAAAATGATAGTTTT+TGG | + | chr1.2:59392231-59392250 | MS.gene40782:CDS | 30.0% |
| ! | TTTTATTGCCTAGTTTGACT+CGG | - | chr1.2:59394207-59394226 | None:intergenic | 30.0% |
| !! | CACAAAATGATAGTTTTTGG+TGG | + | chr1.2:59392234-59392253 | MS.gene40782:CDS | 30.0% |
| !! | GTTTTAATCCTTCTCAAAGA+TGG | + | chr1.2:59391576-59391595 | MS.gene40782:CDS | 30.0% |
| !!! | ATAGTTTTTGGTGGTACAAA+TGG | + | chr1.2:59392243-59392262 | MS.gene40782:CDS | 30.0% |
| !!! | TAGTTTTTGGTGGTACAAAT+GGG | + | chr1.2:59392244-59392263 | MS.gene40782:CDS | 30.0% |
| AAAAAGAGCTGCTAAGGAAT+AGG | - | chr1.2:59393455-59393474 | None:intergenic | 35.0% | |
| AAAAATCAAGGTTCTTCACC+AGG | + | chr1.2:59392819-59392838 | MS.gene40782:CDS | 35.0% | |
| AACGTTATTGCAACGACATT+TGG | + | chr1.2:59393285-59393304 | MS.gene40782:CDS | 35.0% | |
| ACGTTATTGCAACGACATTT+GGG | + | chr1.2:59393286-59393305 | MS.gene40782:CDS | 35.0% | |
| ACTAATACAGTGTCTTTACC+CGG | + | chr1.2:59394910-59394929 | MS.gene40782:CDS | 35.0% | |
| AGAGTACAATGACTATCTCT+AGG | - | chr1.2:59392516-59392535 | None:intergenic | 35.0% | |
| AGGATAAAGCTAATTTGACG+GGG | - | chr1.2:59393435-59393454 | None:intergenic | 35.0% | |
| AGGCTATCATAATGAAATCC+TGG | - | chr1.2:59393518-59393537 | None:intergenic | 35.0% | |
| ATGGACATAACAACTTATCG+GGG | + | chr1.2:59393621-59393640 | MS.gene40782:CDS | 35.0% | |
| ATGTTTGGACCTTGACAAAA+TGG | + | chr1.2:59392140-59392159 | MS.gene40782:CDS | 35.0% | |
| CAAATCATGTGGATAATTCG+AGG | + | chr1.2:59394794-59394813 | MS.gene40782:CDS | 35.0% | |
| CCCGCCATATATAACAATAT+CGG | - | chr1.2:59393405-59393424 | None:intergenic | 35.0% | |
| CCGATATTGTTATATATGGC+GGG | + | chr1.2:59393402-59393421 | MS.gene40782:CDS | 35.0% | |
| CTACCTGAATCAAATTGACA+CGG | - | chr1.2:59393944-59393963 | None:intergenic | 35.0% | |
| GAAGTTCTTGGCAAAATTGA+TGG | + | chr1.2:59394550-59394569 | MS.gene40782:CDS | 35.0% | |
| GGATTAAGCCTAAATGTGAA+GGG | + | chr1.2:59392316-59392335 | MS.gene40782:CDS | 35.0% | |
| GGGAATAAGCTTATTGTGTA+TGG | + | chr1.2:59392543-59392562 | MS.gene40782:CDS | 35.0% | |
| TAATGACTGCAGTAGTGAAT+GGG | + | chr1.2:59394593-59394612 | MS.gene40782:CDS | 35.0% | |
| TAGACCTTAGAACTATGAGA+TGG | + | chr1.2:59392454-59392473 | MS.gene40782:CDS | 35.0% | |
| TATGTGTGCTGAGAGAAATT+AGG | - | chr1.2:59391890-59391909 | None:intergenic | 35.0% | |
| TGGATTAAGCCTAAATGTGA+AGG | + | chr1.2:59392315-59392334 | MS.gene40782:CDS | 35.0% | |
| TGGTCTCAACTTGATATACA+TGG | + | chr1.2:59393332-59393351 | MS.gene40782:CDS | 35.0% | |
| TGTTCTTGATCAGATTGAGA+TGG | - | chr1.2:59394133-59394152 | None:intergenic | 35.0% | |
| TTCAGGTATACATCATTGGA+GGG | + | chr1.2:59393252-59393271 | MS.gene40782:intron | 35.0% | |
| ! | AACTCCATCTCATAGTTCTA+AGG | - | chr1.2:59392461-59392480 | None:intergenic | 35.0% |
| ! | ACTCCTGATTTTATGTTCTC+CGG | - | chr1.2:59394932-59394951 | None:intergenic | 35.0% |
| ! | AGTCATTGTACTCTTGCTAT+TGG | + | chr1.2:59392522-59392541 | MS.gene40782:CDS | 35.0% |
| ! | AGTTCTTTTCCTGAGGTTAA+AGG | + | chr1.2:59392477-59392496 | MS.gene40782:CDS | 35.0% |
| ! | GCAAAGTCTTTGGAAGTTAT+TGG | + | chr1.2:59393645-59393664 | MS.gene40782:CDS | 35.0% |
| ! | GGTGAAAGACTGGTAATTTT+TGG | + | chr1.2:59392384-59392403 | MS.gene40782:CDS | 35.0% |
| ! | GTTCCTTTTATGATTGGAGA+CGG | - | chr1.2:59394892-59394911 | None:intergenic | 35.0% |
| ! | TAGTGGTAATGTTAGTTTCC+AGG | + | chr1.2:59393497-59393516 | MS.gene40782:intron | 35.0% |
| ! | TGAAACAATGACTTGGACTA+GGG | + | chr1.2:59392614-59392633 | MS.gene40782:CDS | 35.0% |
| ! | TTGAAACAATGACTTGGACT+AGG | + | chr1.2:59392613-59392632 | MS.gene40782:CDS | 35.0% |
| ! | TTTCAGGTATACATCATTGG+AGG | + | chr1.2:59393251-59393270 | MS.gene40782:intron | 35.0% |
| !! | GAAAGACTGGTAATTTTTGG+TGG | + | chr1.2:59392387-59392406 | MS.gene40782:CDS | 35.0% |
| !! | GTCATTGTACTCTTGCTATT+GGG | + | chr1.2:59392523-59392542 | MS.gene40782:CDS | 35.0% |
| !! | TAATTTTAGGGATGTTGTGG+AGG | + | chr1.2:59392096-59392115 | MS.gene40782:intron | 35.0% |
| !! | TATTGTTATATATGGCGGGT+AGG | + | chr1.2:59393406-59393425 | MS.gene40782:intron | 35.0% |
| !!! | AGCCTTTTTTCACGAACAAT+TGG | + | chr1.2:59393163-59393182 | MS.gene40782:intron | 35.0% |
| AAAACCAAATGCTTCTGCCA+TGG | + | chr1.2:59394165-59394184 | MS.gene40782:CDS | 40.0% | |
| AAGAACTTCGGTACCAATCT+AGG | - | chr1.2:59394539-59394558 | None:intergenic | 40.0% | |
| ACCAGAAAATTTCGCGTATC+GGG | + | chr1.2:59393864-59393883 | MS.gene40782:intron | 40.0% | |
| AGCAGTGAATGTTGGAACTA+AGG | + | chr1.2:59392860-59392879 | MS.gene40782:CDS | 40.0% | |
| AGCCACATTGCTTTCTTCTT+AGG | - | chr1.2:59391539-59391558 | None:intergenic | 40.0% | |
| ATGTGGAAGTCTTGGGAAAA+TGG | + | chr1.2:59393891-59393910 | MS.gene40782:CDS | 40.0% | |
| ATTGATGGAGCCTTTGATTC+AGG | + | chr1.2:59394565-59394584 | MS.gene40782:CDS | 40.0% | |
| CAAGCATTATTTCCACTTGC+AGG | - | chr1.2:59394988-59395007 | None:intergenic | 40.0% | |
| CGATACAAAAAGAGCTGCTA+AGG | - | chr1.2:59393461-59393480 | None:intergenic | 40.0% | |
| CGTGTCAATTTGATTCAGGT+AGG | + | chr1.2:59393942-59393961 | MS.gene40782:intron | 40.0% | |
| CTAATGACTGCAGTAGTGAA+TGG | + | chr1.2:59394592-59394611 | MS.gene40782:CDS | 40.0% | |
| CTCCTAAGAAGAAAGCAATG+TGG | + | chr1.2:59391534-59391553 | MS.gene40782:CDS | 40.0% | |
| GACCAGAAAATTTCGCGTAT+CGG | + | chr1.2:59393863-59393882 | MS.gene40782:intron | 40.0% | |
| GACGGATGTTAGTAAGTTAG+TGG | + | chr1.2:59393480-59393499 | MS.gene40782:intron | 40.0% | |
| GGCCAATTGTTCGTGAAAAA+AGG | - | chr1.2:59393168-59393187 | None:intergenic | 40.0% | |
| GGGAATAATGTGGAAGTCTT+GGG | + | chr1.2:59393884-59393903 | MS.gene40782:CDS | 40.0% | |
| GTTCGTGAAAAAAGGCTAGA+CGG | - | chr1.2:59393160-59393179 | None:intergenic | 40.0% | |
| TACCCGGAGAACATAAAATC+AGG | + | chr1.2:59394926-59394945 | MS.gene40782:CDS | 40.0% | |
| TCAAGAAAAGAAGACCATCC+TGG | + | chr1.2:59393670-59393689 | MS.gene40782:CDS | 40.0% | |
| TCAGGTATACATCATTGGAG+GGG | + | chr1.2:59393253-59393272 | MS.gene40782:intron | 40.0% | |
| TGAATAATCTATCAGGGAGC+AGG | + | chr1.2:59394721-59394740 | MS.gene40782:intron | 40.0% | |
| TGACAAAATGGAATGGAGCA+AGG | + | chr1.2:59392152-59392171 | MS.gene40782:CDS | 40.0% | |
| TGGACCTTGACAAAATGGAA+TGG | + | chr1.2:59392145-59392164 | MS.gene40782:CDS | 40.0% | |
| TGTGGAAGTCTTGGGAAAAT+GGG | + | chr1.2:59393892-59393911 | MS.gene40782:CDS | 40.0% | |
| ! | AAAATCAGGAGTGACTTGCA+AGG | + | chr1.2:59394940-59394959 | MS.gene40782:CDS | 40.0% |
| ! | AGCAAGTAGTGGTTGCTTTA+GGG | - | chr1.2:59394866-59394885 | None:intergenic | 40.0% |
| ! | AGCAGCTCTTTTTGTATCGA+CGG | + | chr1.2:59393462-59393481 | MS.gene40782:intron | 40.0% |
| ! | ATTGTGTATGGTGGAGATAG+TGG | + | chr1.2:59392555-59392574 | MS.gene40782:CDS | 40.0% |
| ! | CAATGACTATCTCTAGGAAC+AGG | - | chr1.2:59392510-59392529 | None:intergenic | 40.0% |
| ! | CTCCTGATTTTATGTTCTCC+GGG | - | chr1.2:59394931-59394950 | None:intergenic | 40.0% |
| ! | GATAGTGGTGATCAGTATCA+TGG | + | chr1.2:59392570-59392589 | MS.gene40782:CDS | 40.0% |
| ! | TAGATTGGTACCGAAGTTCT+TGG | + | chr1.2:59394538-59394557 | MS.gene40782:intron | 40.0% |
| ! | TGCTCCATTCCATTTTGTCA+AGG | - | chr1.2:59392152-59392171 | None:intergenic | 40.0% |
| !! | CAAGGTTTGGCTTTAACACT+AGG | + | chr1.2:59394958-59394977 | MS.gene40782:CDS | 40.0% |
| !! | GTTTGGCTTTAACACTAGGA+GGG | + | chr1.2:59394962-59394981 | MS.gene40782:CDS | 40.0% |
| !! | TTCATAAGAGGCTGACTTGA+TGG | - | chr1.2:59394772-59394791 | None:intergenic | 40.0% |
| !! | TTGTCAAGTTGACAAGTGCT+TGG | - | chr1.2:59394232-59394251 | None:intergenic | 40.0% |
| !!! | ATTTTTGGTGGTAGTGGAGA+AGG | + | chr1.2:59392399-59392418 | MS.gene40782:CDS | 40.0% |
| !!! | CTGGTAATTTTTGGTGGTAG+TGG | + | chr1.2:59392393-59392412 | MS.gene40782:CDS | 40.0% |
| !!! | GAAGCATTTGGTTTTTGACC+TGG | - | chr1.2:59394160-59394179 | None:intergenic | 40.0% |
| ACAGCACTATGGCTATCTCT+AGG | - | chr1.2:59392204-59392223 | None:intergenic | 45.0% | |
| ACTACAACAGGTGAAAAGCC+AGG | + | chr1.2:59392177-59392196 | MS.gene40782:CDS | 45.0% | |
| AGTCACACTGCTACTCTTGT+TGG | + | chr1.2:59392360-59392379 | MS.gene40782:CDS | 45.0% | |
| ATACATGGTCAACAGCCACA+AGG | + | chr1.2:59393347-59393366 | MS.gene40782:CDS | 45.0% | |
| ATGGAGATGAATGCTGAGAC+AGG | - | chr1.2:59394114-59394133 | None:intergenic | 45.0% | |
| CAGGAACTTCACAACAGAAG+AGG | + | chr1.2:59394026-59394045 | MS.gene40782:intron | 45.0% | |
| CGACCGTCTCCAATCATAAA+AGG | + | chr1.2:59394886-59394905 | MS.gene40782:CDS | 45.0% | |
| CGACCGTGTCAATTTGATTC+AGG | + | chr1.2:59393938-59393957 | MS.gene40782:CDS | 45.0% | |
| CGGGAATAATGTGGAAGTCT+TGG | + | chr1.2:59393883-59393902 | MS.gene40782:CDS | 45.0% | |
| GAAAAGAAGACCATCCTGGA+TGG | + | chr1.2:59393674-59393693 | MS.gene40782:CDS | 45.0% | |
| GAACTTCACAACAGAAGAGG+AGG | + | chr1.2:59394029-59394048 | MS.gene40782:CDS | 45.0% | |
| GGTGGTATCCCTTCACATTT+AGG | - | chr1.2:59392327-59392346 | None:intergenic | 45.0% | |
| GTATACATCATTGGAGGGGT+CGG | + | chr1.2:59393257-59393276 | MS.gene40782:CDS | 45.0% | |
| GTATGAGAAAACCGTCCTTG+TGG | - | chr1.2:59393365-59393384 | None:intergenic | 45.0% | |
| GTCCTACAAGAACAGCACTA+TGG | - | chr1.2:59392215-59392234 | None:intergenic | 45.0% | |
| GTCTTGGGAAAATGGGGTTA+TGG | + | chr1.2:59393899-59393918 | MS.gene40782:CDS | 45.0% | |
| GTGGAAGTCTTGGGAAAATG+GGG | + | chr1.2:59393893-59393912 | MS.gene40782:CDS | 45.0% | |
| TCTGATCAAGAACAGACTCC+AGG | + | chr1.2:59394139-59394158 | MS.gene40782:CDS | 45.0% | |
| TGGAGATGAATGCTGAGACA+GGG | - | chr1.2:59394113-59394132 | None:intergenic | 45.0% | |
| TGGAGCAAGGTTACTACAAC+AGG | + | chr1.2:59392165-59392184 | MS.gene40782:CDS | 45.0% | |
| TGGCGGAGTAGATACAAACA+CGG | + | chr1.2:59393694-59393713 | MS.gene40782:CDS | 45.0% | |
| TTATCGGGGTGCAAAGTCTT+TGG | + | chr1.2:59393635-59393654 | MS.gene40782:CDS | 45.0% | |
| TTCAACATCCCACACCTTTG+TGG | - | chr1.2:59394065-59394084 | None:intergenic | 45.0% | |
| TTCGCGTATCGGGAATAATG+TGG | + | chr1.2:59393874-59393893 | MS.gene40782:CDS | 45.0% | |
| ! | AATTGCTGCCACAAAGGTGT+GGG | + | chr1.2:59394054-59394073 | MS.gene40782:CDS | 45.0% |
| ! | AGCCATAGTGCTGTTCTTGT+AGG | + | chr1.2:59392210-59392229 | MS.gene40782:CDS | 45.0% |
| ! | CAATGACTTGGACTAGGGTA+TGG | + | chr1.2:59392619-59392638 | MS.gene40782:intron | 45.0% |
| ! | GAGATGGAGTTCTTTTCCTG+AGG | + | chr1.2:59392470-59392489 | MS.gene40782:CDS | 45.0% |
| ! | GAGCAAGTAGTGGTTGCTTT+AGG | - | chr1.2:59394867-59394886 | None:intergenic | 45.0% |
| ! | GTGAATGGGAGACTTTTCAG+AGG | + | chr1.2:59394607-59394626 | MS.gene40782:CDS | 45.0% |
| ! | TCCCGATACGCGAAATTTTC+TGG | - | chr1.2:59393868-59393887 | None:intergenic | 45.0% |
| ! | TGGCTGTATCCCAAGGTTTT+AGG | + | chr1.2:59391554-59391573 | MS.gene40782:CDS | 45.0% |
| !! | GAATCCATGGCAGAAGCATT+TGG | - | chr1.2:59394172-59394191 | None:intergenic | 45.0% |
| !! | GGTTTGGCTTTAACACTAGG+AGG | + | chr1.2:59394961-59394980 | MS.gene40782:CDS | 45.0% |
| !! | TCTTGTTGGTGGTGAAAGAC+TGG | + | chr1.2:59392374-59392393 | MS.gene40782:CDS | 45.0% |
| !! | ATTAAAATATATATGAATTT+AGG | - | chr1.2:59392969-59392988 | None:intergenic | 5.0% |
| !!! | ATTTGATTTAATTTAATTTT+AGG | + | chr1.2:59392083-59392102 | MS.gene40782:intron | 5.0% |
| !!! | TTTGATTTAATTTAATTTTA+GGG | + | chr1.2:59392084-59392103 | MS.gene40782:intron | 5.0% |
| AAGAAGACCATCCTGGATGG+CGG | + | chr1.2:59393677-59393696 | MS.gene40782:CDS | 50.0% | |
| AAGGGATACCACCTTCACCA+AGG | + | chr1.2:59392334-59392353 | MS.gene40782:CDS | 50.0% | |
| AAGGTTCTTCACCAGGAGTC+AGG | + | chr1.2:59392826-59392845 | MS.gene40782:CDS | 50.0% | |
| ACCTGCTACAAGTCAGAGAC+AGG | - | chr1.2:59393538-59393557 | None:intergenic | 50.0% | |
| ACGCGGATACACTCAACACT+TGG | + | chr1.2:59394408-59394427 | MS.gene40782:CDS | 50.0% | |
| AGCAATGTGGCTGTATCCCA+AGG | + | chr1.2:59391547-59391566 | MS.gene40782:CDS | 50.0% | |
| AGGGATACCACCTTCACCAA+GGG | + | chr1.2:59392335-59392354 | MS.gene40782:CDS | 50.0% | |
| AGGTTCTTCACCAGGAGTCA+GGG | + | chr1.2:59392827-59392846 | MS.gene40782:CDS | 50.0% | |
| ATGGTCAACAGCCACAAGGA+CGG | + | chr1.2:59393351-59393370 | MS.gene40782:CDS | 50.0% | |
| CACACTGCTACTCTTGTTGG+TGG | + | chr1.2:59392363-59392382 | MS.gene40782:CDS | 50.0% | |
| CGATATCGCCGAGTCAAACT+AGG | + | chr1.2:59394196-59394215 | MS.gene40782:CDS | 50.0% | |
| GAATTGCTGCCACAAAGGTG+TGG | + | chr1.2:59394053-59394072 | MS.gene40782:CDS | 50.0% | |
| GAGGAGAATTGCTGCCACAA+AGG | + | chr1.2:59394048-59394067 | MS.gene40782:CDS | 50.0% | |
| GCGATATCGCTGAGAATCCA+TGG | - | chr1.2:59394185-59394204 | None:intergenic | 50.0% | |
| GGCACATCACCTTTAACCTC+AGG | - | chr1.2:59392489-59392508 | None:intergenic | 50.0% | |
| GGTCATGCAGCAGTGAATGT+TGG | + | chr1.2:59392852-59392871 | MS.gene40782:CDS | 50.0% | |
| GTAGCAGTGTGACTTTCCCT+TGG | - | chr1.2:59392354-59392373 | None:intergenic | 50.0% | |
| GTGTGACTTTCCCTTGGTGA+AGG | - | chr1.2:59392348-59392367 | None:intergenic | 50.0% | |
| TGACTTTCCCTTGGTGAAGG+TGG | - | chr1.2:59392345-59392364 | None:intergenic | 50.0% | |
| TTGTATCTACTCCGCCATCC+AGG | - | chr1.2:59393691-59393710 | None:intergenic | 50.0% | |
| ! | ATCGGTGTCTGCAACAACAG+CGG | - | chr1.2:59393387-59393406 | None:intergenic | 50.0% |
| ! | CAGGAGTGACTTGCAAGGTT+TGG | + | chr1.2:59394945-59394964 | MS.gene40782:CDS | 50.0% |
| ! | CTCTGACTTGTAGCAGGTGT+GGG | + | chr1.2:59393540-59393559 | MS.gene40782:intron | 50.0% |
| ! | CTTGCAGCAGAGCATCCAAA+TGG | + | chr1.2:59393602-59393621 | MS.gene40782:CDS | 50.0% |
| ! | GAGTGACCCCATCTTTGAGA+AGG | - | chr1.2:59391587-59391606 | None:intergenic | 50.0% |
| ! | TCTCTGACTTGTAGCAGGTG+TGG | + | chr1.2:59393539-59393558 | MS.gene40782:intron | 50.0% |
| ! | TCTGACTTGTAGCAGGTGTG+GGG | + | chr1.2:59393541-59393560 | MS.gene40782:intron | 50.0% |
| !! | CAGGCTTCGGTTCTAAAGCT+TGG | - | chr1.2:59394384-59394403 | None:intergenic | 50.0% |
| !! | CTATGGCTATCTCTAGGACC+TGG | - | chr1.2:59392198-59392217 | None:intergenic | 50.0% |
| !! | GGTTGCTTTAGGGCATAGCA+CGG | - | chr1.2:59394856-59394875 | None:intergenic | 50.0% |
| ATCTACTCCGCCATCCAGGA+TGG | - | chr1.2:59393687-59393706 | None:intergenic | 55.0% | |
| GGTCACTCTGCTTGCTTCTC+TGG | + | chr1.2:59391599-59391618 | MS.gene40782:CDS | 55.0% | |
| GTGTTGAGTGTATCCGCGTC+CGG | - | chr1.2:59394407-59394426 | None:intergenic | 55.0% | |
| ! | GCCTGTCTCTGACTTGTAGC+AGG | + | chr1.2:59393534-59393553 | MS.gene40782:intron | 55.0% |
| !! | GCTTTAGAACCGAAGCCTGC+CGG | + | chr1.2:59394385-59394404 | MS.gene40782:CDS | 55.0% |
| ACACTAGGAGGGCCTGCAAG+TGG | + | chr1.2:59394973-59394992 | MS.gene40782:CDS | 60.0% | |
| GGAGACGGTCGAGCAAGTAG+TGG | - | chr1.2:59394877-59394896 | None:intergenic | 60.0% | |
| TCTTCACCAGGAGTCAGGGC+AGG | + | chr1.2:59392831-59392850 | MS.gene40782:CDS | 60.0% | |
| GCATGACCTGCCCTGACTCC+TGG | - | chr1.2:59392840-59392859 | None:intergenic | 65.0% | |
| TATCCGCGTCCGGCAGGCTT+CGG | - | chr1.2:59394397-59394416 | None:intergenic | 65.0% | |
| TGAGTGTATCCGCGTCCGGC+AGG | - | chr1.2:59394403-59394422 | None:intergenic | 65.0% | |
| GAACCGAAGCCTGCCGGACG+CGG | + | chr1.2:59394391-59394410 | MS.gene40782:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59391512 | 59395008 | 59391512 | ID=MS.gene40782 |
| chr1.2 | mRNA | 59391512 | 59395008 | 59391512 | ID=MS.gene40782.t1;Parent=MS.gene40782 |
| chr1.2 | exon | 59391512 | 59391643 | 59391512 | ID=MS.gene40782.t1.exon1;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59391512 | 59391643 | 59391512 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59392105 | 59392635 | 59392105 | ID=MS.gene40782.t1.exon2;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59392105 | 59392635 | 59392105 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59392816 | 59392881 | 59392816 | ID=MS.gene40782.t1.exon3;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59392816 | 59392881 | 59392816 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59393257 | 59393423 | 59393257 | ID=MS.gene40782.t1.exon4;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59393257 | 59393423 | 59393257 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59393556 | 59393715 | 59393556 | ID=MS.gene40782.t1.exon5;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59393556 | 59393715 | 59393556 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59393869 | 59393959 | 59393869 | ID=MS.gene40782.t1.exon6;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59393869 | 59393959 | 59393869 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59394029 | 59394429 | 59394029 | ID=MS.gene40782.t1.exon7;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59394029 | 59394429 | 59394029 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59394541 | 59394645 | 59394541 | ID=MS.gene40782.t1.exon8;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59394541 | 59394645 | 59394541 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| chr1.2 | exon | 59394736 | 59395008 | 59394736 | ID=MS.gene40782.t1.exon9;Parent=MS.gene40782.t1 |
| chr1.2 | CDS | 59394736 | 59395008 | 59394736 | ID=cds.MS.gene40782.t1;Parent=MS.gene40782.t1 |
| Gene Sequence |
| Protein sequence |
