Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42070.t1 | XP_013449620.1 | 98.5 | 874 | 13 | 0 | 1 | 874 | 13 | 886 | 2.90E-233 | 818.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42070.t1 | O22938 | 72.2 | 396 | 109 | 1 | 480 | 874 | 492 | 887 | 2.5e-161 | 570.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42070.t1 | A0A072U3C5 | 98.5 | 874 | 13 | 0 | 1 | 874 | 13 | 886 | 2.1e-233 | 818.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene42070 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene049697 | MS.gene42070 | 0.817662 | 2.94E-52 | -1.69E-46 |
| MS.gene050630 | MS.gene42070 | 0.830087 | 3.58E-55 | -1.69E-46 |
| MS.gene050667 | MS.gene42070 | 0.802105 | 6.57E-49 | -1.69E-46 |
| MS.gene051067 | MS.gene42070 | 0.823759 | 1.16E-53 | -1.69E-46 |
| MS.gene051263 | MS.gene42070 | 0.825653 | 4.17E-54 | -1.69E-46 |
| MS.gene051781 | MS.gene42070 | 0.827963 | 1.17E-54 | -1.69E-46 |
| MS.gene051787 | MS.gene42070 | 0.822235 | 2.64E-53 | -1.69E-46 |
| MS.gene054614 | MS.gene42070 | 0.8075 | 4.90E-50 | -1.69E-46 |
| MS.gene056228 | MS.gene42070 | 0.824428 | 8.12E-54 | -1.69E-46 |
| MS.gene05724 | MS.gene42070 | 0.804322 | 2.28E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 188 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTGGCAATGTTCTTT+TGG | 0.157433 | 7.1:-15725030 | MS.gene42070:CDS |
| AACTCTAAGCTCTTGATTTA+TGG | 0.171747 | 7.1:+15727137 | None:intergenic |
| CTTCCTGTTGAAGAAGATTT+TGG | 0.175577 | 7.1:-15724717 | MS.gene42070:CDS |
| GGATTGATTCCTCCTGATTT+TGG | 0.181961 | 7.1:-15726937 | MS.gene42070:CDS |
| AATTTCTCGAATAATCTATT+TGG | 0.205401 | 7.1:-15725806 | MS.gene42070:CDS |
| TTGTCTGGAAATAGCCTATT+TGG | 0.209762 | 7.1:-15726238 | MS.gene42070:CDS |
| TCTGGAGTTTCCCCTCTTAC+AGG | 0.212671 | 7.1:+15724657 | None:intergenic |
| GCTGATAATAATAATCTTTC+TGG | 0.221079 | 7.1:-15726382 | MS.gene42070:CDS |
| ATGAGGGATCTCTCCTCTTA+TGG | 0.227732 | 7.1:+15726081 | None:intergenic |
| CTCACCAACAAGCAAATTAT+TGG | 0.253441 | 7.1:+15726810 | None:intergenic |
| GTTTGTAGGTGCTGAGTTAC+AGG | 0.264761 | 7.1:-15727178 | MS.gene42070:CDS |
| CGGACCATTACCACCAGAAT+TGG | 0.269477 | 7.1:-15725927 | MS.gene42070:CDS |
| GCCTTCTGGTGTGGTCTTAT+CGG | 0.269984 | 7.1:-15725357 | MS.gene42070:CDS |
| GGTGATCTTCCTGGGGAAAT+TGG | 0.286809 | 7.1:-15726505 | MS.gene42070:CDS |
| AGAATCGTACTGGCTGTAAT+TGG | 0.293631 | 7.1:-15725638 | MS.gene42070:CDS |
| AACAATACCGGCAGCCTCTT+TGG | 0.294704 | 7.1:+15725538 | None:intergenic |
| GGAGAGATCCCTCATGAAAT+TGG | 0.298076 | 7.1:-15726073 | MS.gene42070:CDS |
| ATCCATCTTGACATTTCTTC+TGG | 0.299373 | 7.1:-15725044 | MS.gene42070:CDS |
| CTTTCAAATGTTGAGTTTGT+AGG | 0.300725 | 7.1:-15727192 | MS.gene42070:CDS |
| ATGTTTGCATCATTCCATTC+AGG | 0.304943 | 7.1:+15727114 | None:intergenic |
| CTTTCCAATAATTTGCTTGT+TGG | 0.308154 | 7.1:-15726814 | MS.gene42070:CDS |
| CCCGAAGTGAAAATGCTTGA+TGG | 0.309677 | 7.1:+15726568 | None:intergenic |
| GTTCTCTTATCATCTTGTTC+TGG | 0.315316 | 7.1:+15725294 | None:intergenic |
| TATCAGCTTCAAAGTATGTT+AGG | 0.325058 | 7.1:+15726398 | None:intergenic |
| GTTTCAAACAATCGGCTATC+AGG | 0.328964 | 7.1:-15725875 | MS.gene42070:CDS |
| TCTTTCTGGTGAACTAGTTT+CGG | 0.334515 | 7.1:-15726368 | MS.gene42070:CDS |
| GCCCTTTCAAGCATTAGAAT+TGG | 0.337654 | 7.1:-15726472 | MS.gene42070:CDS |
| GGGACGATTCCACAAGAGTT+TGG | 0.340134 | 7.1:-15726289 | MS.gene42070:CDS |
| GGAATCAAGCCTAGATTATC+AGG | 0.341174 | 7.1:+15726640 | None:intergenic |
| GAAAATCTTGTGCGACCTAT+TGG | 0.348314 | 7.1:-15725245 | MS.gene42070:CDS |
| AGCGCAGTTGCCGGCTCCTT+TGG | 0.352294 | 7.1:-15724930 | MS.gene42070:CDS |
| CTCTCGATGTTTCAAACAAT+CGG | 0.353051 | 7.1:-15725883 | MS.gene42070:CDS |
| TAATATCCCAACTGAACTTA+AGG | 0.356848 | 7.1:-15725852 | MS.gene42070:CDS |
| CTCTTGAATTTAGCTTCAAA+TGG | 0.360462 | 7.1:-15726319 | MS.gene42070:CDS |
| GAAATATTGCAGATTTCATT+TGG | 0.361702 | 7.1:+15726136 | None:intergenic |
| CTTGCTCACAAGAATCTTAG+AGG | 0.364214 | 7.1:-15727027 | MS.gene42070:CDS |
| TTGCAACTGAGAATTGGTTT+TGG | 0.365319 | 7.1:+15726208 | None:intergenic |
| GGCCAATCAGGCTTATATTC+AGG | 0.368371 | 7.1:+15725131 | None:intergenic |
| GCAACTCCTGCAATTTCTTT+AGG | 0.372972 | 7.1:+15726767 | None:intergenic |
| GTACTGGCTGTAATTGGTTC+CGG | 0.380465 | 7.1:-15725632 | MS.gene42070:CDS |
| TTTCCCAATTCTGGTGGTAA+TGG | 0.389859 | 7.1:+15725923 | None:intergenic |
| CCATAGCTGTAAACATTTCC+TGG | 0.390213 | 7.1:+15724771 | None:intergenic |
| CTGCATTCTAACCAGCTTGA+AGG | 0.394554 | 7.1:-15726598 | MS.gene42070:CDS |
| GACAAACCAACTATAATTGC+AGG | 0.395779 | 7.1:-15725500 | MS.gene42070:CDS |
| GACCTTTCAAATAATAACTT+TGG | 0.395844 | 7.1:-15726961 | MS.gene42070:CDS |
| TCAGACAAACTCCCAAAATC+AGG | 0.400463 | 7.1:+15726925 | None:intergenic |
| TACAAGGCAACCATGCCTTC+TGG | 0.402078 | 7.1:-15725371 | MS.gene42070:CDS |
| CAGCTATGGTGTTGTTCTGT+TGG | 0.402309 | 7.1:-15724757 | MS.gene42070:CDS |
| TTATCATCTTGTTCTGGTGG+TGG | 0.402811 | 7.1:+15725300 | None:intergenic |
| ATTAGCAACAACAGATTGAA+TGG | 0.405659 | 7.1:-15726166 | MS.gene42070:CDS |
| TCACCAAAATCTTCTTCAAC+AGG | 0.405859 | 7.1:+15724714 | None:intergenic |
| TTCGGGAAAACTAGAAGTTC+TGG | 0.407637 | 7.1:-15726551 | MS.gene42070:CDS |
| ACAGTCCCTGCAATTATAGT+TGG | 0.415000 | 7.1:+15725494 | None:intergenic |
| TTCTCTTCTAATAAGTTTGA+AGG | 0.415412 | 7.1:-15726886 | MS.gene42070:CDS |
| AAGCTTAGTACAGTTTCCTT+TGG | 0.416719 | 7.1:-15724618 | MS.gene42070:CDS |
| TTTAGGCCATGAAGTTCAAT+TGG | 0.418998 | 7.1:+15726784 | None:intergenic |
| GAGTTACCAATTGAACTTCA+TGG | 0.420166 | 7.1:-15726790 | MS.gene42070:CDS |
| AACTTGAACTAGGACTCTTC+TGG | 0.420623 | 7.1:+15725756 | None:intergenic |
| CATCGGTGTGGCAGAAGGCT+TGG | 0.421244 | 7.1:-15725090 | MS.gene42070:CDS |
| GCTTATGAGAATCGTTTAGA+TGG | 0.429443 | 7.1:-15726670 | MS.gene42070:CDS |
| TTGAGCTTCAATCATCTTCA+CGG | 0.434527 | 7.1:-15725947 | MS.gene42070:CDS |
| GGTTCAATTCCATCACAGTT+TGG | 0.435006 | 7.1:-15726865 | MS.gene42070:CDS |
| CAACTGTAATTCAAGAAGTC+TGG | 0.439495 | 7.1:+15726042 | None:intergenic |
| CAACAGGAAGTCGAGTTGTA+AGG | 0.440079 | 7.1:+15724730 | None:intergenic |
| TCCAATTCTAATGCTTGAAA+GGG | 0.440906 | 7.1:+15726471 | None:intergenic |
| AACATTCCCTTAAGTTCAGT+TGG | 0.443567 | 7.1:+15725845 | None:intergenic |
| TTCTCGAATAATCTATTTGG+AGG | 0.444044 | 7.1:-15725803 | MS.gene42070:CDS |
| AACTTTCAGCTCAGTTTACA+AGG | 0.446751 | 7.1:-15725387 | MS.gene42070:CDS |
| AGACTTCTTGAATTACAGTT+GGG | 0.447417 | 7.1:-15726040 | MS.gene42070:CDS |
| AGCTGATACAATGTTCCATT+GGG | 0.447459 | 7.1:+15725176 | None:intergenic |
| CACCAAAGTTATTATTTGAA+AGG | 0.449085 | 7.1:+15726959 | None:intergenic |
| AATTATAGTTGGTTTGTCAT+TGG | 0.449864 | 7.1:+15725505 | None:intergenic |
| GTACAGTTTCCTTTGGTTGG+AGG | 0.450753 | 7.1:-15724611 | MS.gene42070:CDS |
| GATAGCCTAGCAGGCCAATC+AGG | 0.451850 | 7.1:+15725119 | None:intergenic |
| TCATGGCCTAAAGAAATTGC+AGG | 0.453254 | 7.1:-15726773 | MS.gene42070:CDS |
| TCCTGGTGCTGTCACTTGCA+TGG | 0.453558 | 7.1:+15724788 | None:intergenic |
| TTCCAATTCTAATGCTTGAA+AGG | 0.455775 | 7.1:+15726470 | None:intergenic |
| CTTTCAAATAATAACTTTGG+TGG | 0.456486 | 7.1:-15726958 | MS.gene42070:CDS |
| TTAGTACAGTTTCCTTTGGT+TGG | 0.457498 | 7.1:-15724614 | MS.gene42070:CDS |
| TTGAATCTGAATTCCATAAG+AGG | 0.457776 | 7.1:-15726094 | MS.gene42070:CDS |
| GGATGCAAACTTCAAGCCAT+TGG | 0.458541 | 7.1:-15725009 | MS.gene42070:CDS |
| CTCTTATCATCTTGTTCTGG+TGG | 0.458575 | 7.1:+15725297 | None:intergenic |
| GCCTCCACATGAAAAGTTCA+AGG | 0.465274 | 7.1:+15725703 | None:intergenic |
| ATAGTTGGTTTGTCATTGGT+TGG | 0.465982 | 7.1:+15725509 | None:intergenic |
| AATATCCCAACTGAACTTAA+GGG | 0.466598 | 7.1:-15725851 | MS.gene42070:CDS |
| GGTAATATTCCTAAAACCAT+TGG | 0.467646 | 7.1:-15726433 | MS.gene42070:CDS |
| GGCAACTGCGCTTATACTTC+CGG | 0.467952 | 7.1:+15724941 | None:intergenic |
| GGGAATGTTAAGCTTGATAG+AGG | 0.468091 | 7.1:-15725831 | MS.gene42070:CDS |
| GCTTATACTTCCGGTACCTC+TGG | 0.473081 | 7.1:+15724950 | None:intergenic |
| GGAAGTATAAGCGCAGTTGC+CGG | 0.475553 | 7.1:-15724939 | MS.gene42070:CDS |
| TTATGGCATGTATTATAGCT+TGG | 0.475689 | 7.1:+15727154 | None:intergenic |
| TTCCTGATGTGACTGATCTC+AGG | 0.476789 | 7.1:+15725989 | None:intergenic |
| TTAGGCAATAAAGGGCTTTG+TGG | 0.476862 | 7.1:-15725731 | MS.gene42070:CDS |
| AAGCTGATACAATGTTCCAT+TGG | 0.482254 | 7.1:+15725175 | None:intergenic |
| CAGGTTAAGTATTTGAAGCT+CGG | 0.484649 | 7.1:+15726618 | None:intergenic |
| AGAAATGCTTGCTGCTCTAA+AGG | 0.485324 | 7.1:-15724586 | MS.gene42070:CDS |
| GGTAGGATTCCTGATAATCT+AGG | 0.486453 | 7.1:-15726649 | MS.gene42070:CDS |
| AACCTGAATATAAGCCTGAT+TGG | 0.488292 | 7.1:-15725133 | MS.gene42070:CDS |
| CTGGTGTGGTCTTATCGGTC+AGG | 0.489481 | 7.1:-15725352 | MS.gene42070:CDS |
| AACGGTACAAATGTTGGTAC+AGG | 0.491527 | 7.1:+15725779 | None:intergenic |
| ATTGGAAACAACCGTCTAGT+AGG | 0.492703 | 7.1:-15726454 | MS.gene42070:CDS |
| CAGATTACTGCACTTGGCAA+GGG | 0.494370 | 7.1:-15727089 | MS.gene42070:CDS |
| ACATTCCCTTAAGTTCAGTT+GGG | 0.494458 | 7.1:+15725846 | None:intergenic |
| AGGTTAAGTATTTGAAGCTC+GGG | 0.497359 | 7.1:+15726619 | None:intergenic |
| ATGAGAATCGTTTAGATGGT+AGG | 0.497440 | 7.1:-15726666 | MS.gene42070:CDS |
| CCAGGAAATGTTTACAGCTA+TGG | 0.500115 | 7.1:-15724771 | MS.gene42070:CDS |
| CAACAAGCAAATTATTGGAA+AGG | 0.500553 | 7.1:+15726815 | None:intergenic |
| ATGGCAATGGATAGCCTAGC+AGG | 0.501319 | 7.1:+15725110 | None:intergenic |
| ATAAGTTGTCCAAACTCTTG+TGG | 0.501450 | 7.1:+15726280 | None:intergenic |
| CAGACTTCTTGAATTACAGT+TGG | 0.504151 | 7.1:-15726041 | MS.gene42070:CDS |
| TCATAAATGACATAGCCAAT+AGG | 0.505802 | 7.1:+15725230 | None:intergenic |
| CTCCTGAGATCAGTCACATC+AGG | 0.506153 | 7.1:-15725991 | MS.gene42070:CDS |
| ATACTTCCGGTACCTCTGGT+TGG | 0.507395 | 7.1:+15724954 | None:intergenic |
| CTTCAAGCTGGTTAGAATGC+AGG | 0.508769 | 7.1:+15726599 | None:intergenic |
| ATAAGCCTGATTGGCCTGCT+AGG | 0.510979 | 7.1:-15725124 | MS.gene42070:CDS |
| AAGGCGTAGATTTGGTTAAG+TGG | 0.510998 | 7.1:-15724692 | MS.gene42070:CDS |
| TTGGGGAGTAACTATTTGAC+TGG | 0.513179 | 7.1:-15726022 | MS.gene42070:CDS |
| GAAAATAATTATGCAACAGA+AGG | 0.513282 | 7.1:+15725198 | None:intergenic |
| GGACCATTACCACCAGAATT+GGG | 0.514267 | 7.1:-15725926 | MS.gene42070:CDS |
| GGATAATTGCGACATGATGA+AGG | 0.516987 | 7.1:+15725063 | None:intergenic |
| GCAAACTTCAAGCCATTGGT+TGG | 0.517116 | 7.1:-15725005 | MS.gene42070:CDS |
| CTCGATCCAACCAGAGGTAC+CGG | 0.519011 | 7.1:-15724960 | MS.gene42070:CDS |
| TCAGATTACTGCACTTGGCA+AGG | 0.519680 | 7.1:-15727090 | MS.gene42070:CDS |
| CACAATTTCCAATTTCATGA+GGG | 0.520243 | 7.1:+15726065 | None:intergenic |
| GTTCATAGTGCTCCTGTAAG+AGG | 0.522209 | 7.1:-15724669 | MS.gene42070:CDS |
| TCGTTTGGCTGGTGTGCTAT+CGG | 0.526248 | 7.1:+15724548 | None:intergenic |
| GTCAAATTCCCCACCCAAGA+AGG | 0.529529 | 7.1:+15726712 | None:intergenic |
| CATTTCTTTCCTCCAACCAA+AGG | 0.530309 | 7.1:+15724602 | None:intergenic |
| ACCATGCAAGTGACAGCACC+AGG | 0.531696 | 7.1:-15724789 | MS.gene42070:CDS |
| TTCATAGTGCTCCTGTAAGA+GGG | 0.538444 | 7.1:-15724668 | MS.gene42070:CDS |
| TTCTGCCACACCGATGGCAA+TGG | 0.542053 | 7.1:+15725097 | None:intergenic |
| CAAGCCTTCTGCCACACCGA+TGG | 0.542258 | 7.1:+15725091 | None:intergenic |
| ACATTTCAGATTACTGCACT+TGG | 0.544399 | 7.1:-15727095 | MS.gene42070:CDS |
| TTCTAATGCTTGAAAGGGCA+TGG | 0.546081 | 7.1:+15726476 | None:intergenic |
| AAGAGCTTAGAGTTCCTGAA+TGG | 0.546221 | 7.1:-15727128 | MS.gene42070:CDS |
| TGGACAACTTATGAACCTAC+AGG | 0.548488 | 7.1:-15726269 | MS.gene42070:CDS |
| TTTGCATCAAGTATCTGCTC+TGG | 0.550075 | 7.1:+15724639 | None:intergenic |
| ATTGCCATCGGTGTGGCAGA+AGG | 0.550101 | 7.1:-15725095 | MS.gene42070:CDS |
| TTCTGGAACGGTACAAATGT+TGG | 0.552954 | 7.1:+15725773 | None:intergenic |
| AAGTTGTGGAAATCATTCAA+TGG | 0.553266 | 7.1:-15727064 | MS.gene42070:CDS |
| TGGCAGTTGCCAATTTCCCC+AGG | 0.555370 | 7.1:+15726496 | None:intergenic |
| AGGCGTAGATTTGGTTAAGT+GGG | 0.557701 | 7.1:-15724691 | MS.gene42070:CDS |
| GGTTTCTTACAGAATCGTAC+TGG | 0.558518 | 7.1:-15725648 | MS.gene42070:CDS |
| GGCAACCATGCCTTCTGGTG+TGG | 0.561160 | 7.1:-15725366 | MS.gene42070:CDS |
| GGTTGGATCATCAACAATAC+CGG | 0.561435 | 7.1:+15725526 | None:intergenic |
| ATGGTATTGAACCTTCAAGC+TGG | 0.564701 | 7.1:+15726587 | None:intergenic |
| TTAGCAACAACAGATTGAAT+GGG | 0.564735 | 7.1:-15726165 | MS.gene42070:CDS |
| ATCTCAATCTCTCCAACCAA+TGG | 0.565319 | 7.1:+15724993 | None:intergenic |
| CAGACAAAATTAATTCCTGT+AGG | 0.567337 | 7.1:+15726254 | None:intergenic |
| TAGGCTACTAAGATTTCCAA+TGG | 0.571424 | 7.1:+15726417 | None:intergenic |
| GCACAATTTCCAATTTCATG+AGG | 0.572802 | 7.1:+15726064 | None:intergenic |
| CTGAGACCACCAAACTGTGA+TGG | 0.575371 | 7.1:+15726856 | None:intergenic |
| TGCCAGAAGAAATGTCAAGA+TGG | 0.580752 | 7.1:+15725042 | None:intergenic |
| CTTTCTAGTAATCAATTGAG+TGG | 0.580824 | 7.1:-15726742 | MS.gene42070:CDS |
| TCCTTTGGTTACATACCACC+AGG | 0.589541 | 7.1:-15724915 | MS.gene42070:intron |
| TCAATTCCATCACAGTTTGG+TGG | 0.590793 | 7.1:-15726862 | MS.gene42070:CDS |
| TGTCGATAATCTACAACAAG+CGG | 0.593151 | 7.1:-15725468 | MS.gene42070:CDS |
| GACTCGAATAAGCTCAGCAG+TGG | 0.594777 | 7.1:-15725410 | MS.gene42070:CDS |
| TAGGAATATTACCTACTAGA+CGG | 0.596690 | 7.1:+15726443 | None:intergenic |
| TGGTATGTAACCAAAGGAGC+CGG | 0.596921 | 7.1:+15724920 | None:intergenic |
| ACCGATAAGACCACACCAGA+AGG | 0.598744 | 7.1:+15725356 | None:intergenic |
| AAAATAATTATGCAACAGAA+GGG | 0.600195 | 7.1:+15725199 | None:intergenic |
| GACTTCTTGAATTACAGTTG+GGG | 0.601771 | 7.1:-15726039 | MS.gene42070:CDS |
| TAAGACCACACCAGAAGGCA+TGG | 0.603338 | 7.1:+15725361 | None:intergenic |
| TGTGCTATCGGTGCAAAGCA+AGG | 0.604002 | 7.1:+15724560 | None:intergenic |
| AAAGCAGCCAAAGAGGCTGC+CGG | 0.609880 | 7.1:-15725545 | MS.gene42070:CDS |
| GCTAGGCTATCCATTGCCAT+CGG | 0.616624 | 7.1:-15725107 | MS.gene42070:CDS |
| TCGCGTTAACGACAGCATCA+AGG | 0.618362 | 7.1:+15725441 | None:intergenic |
| AGATGATAAGAGAACTCGAA+AGG | 0.619445 | 7.1:-15725286 | MS.gene42070:CDS |
| AGATTACTGCACTTGGCAAG+GGG | 0.621782 | 7.1:-15727088 | MS.gene42070:CDS |
| ACCTGGTGGTATGTAACCAA+AGG | 0.623579 | 7.1:+15724914 | None:intergenic |
| CATTTGAAGCTAAATTCAAG+AGG | 0.626624 | 7.1:+15726320 | None:intergenic |
| ACAAACCAACTATAATTGCA+GGG | 0.630579 | 7.1:-15725499 | MS.gene42070:CDS |
| CCTCCACATGAAAAGTTCAA+GGG | 0.631026 | 7.1:+15725704 | None:intergenic |
| GAACTAGGACTCTTCTGGAA+CGG | 0.633264 | 7.1:+15725761 | None:intergenic |
| TTCTGTAAGAAACCTTGTGA+TGG | 0.636971 | 7.1:+15725657 | None:intergenic |
| TGTTGTTTATGATCCGAGAG+AGG | 0.637645 | 7.1:-15725574 | MS.gene42070:CDS |
| CTGATGTGACTGATCTCAGG+AGG | 0.642948 | 7.1:+15725992 | None:intergenic |
| ATTTGAAGCTAAATTCAAGA+GGG | 0.644014 | 7.1:+15726321 | None:intergenic |
| ACTTGGCAAGGGGTAAGTTG+TGG | 0.648335 | 7.1:-15727078 | MS.gene42070:CDS |
| TCATAGTGCTCCTGTAAGAG+GGG | 0.654142 | 7.1:-15724667 | MS.gene42070:CDS |
| GACAAACTCCCAAAATCAGG+AGG | 0.655852 | 7.1:+15726928 | None:intergenic |
| GCTATCCATTGCCATCGGTG+TGG | 0.669242 | 7.1:-15725102 | MS.gene42070:CDS |
| ACGGTACAAATGTTGGTACA+GGG | 0.671544 | 7.1:+15725780 | None:intergenic |
| GGTCAGGAGACTAAAATCTG+TGG | 0.674913 | 7.1:-15725336 | MS.gene42070:CDS |
| TCACAGTAGTGACCATCACA+AGG | 0.681386 | 7.1:-15725669 | MS.gene42070:CDS |
| AGCTTCTTCATGAATCAACA+AGG | 0.689142 | 7.1:-15725157 | MS.gene42070:CDS |
| AAACTTCTCGATCCAACCAG+AGG | 0.708538 | 7.1:-15724966 | MS.gene42070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGTAATATGAAAAATTAAA+TGG | + | chr7.1:15726841-15726860 | None:intergenic | 15.0% |
| !! | AAAATAATTATGCAACAGAA+GGG | + | chr7.1:15726507-15726526 | None:intergenic | 20.0% |
| !! | AATTTCTCGAATAATCTATT+TGG | - | chr7.1:15725897-15725916 | MS.gene42070:CDS | 20.0% |
| ! | ATGTTGAAAAATAGTATACC+TGG | + | chr7.1:15726809-15726828 | None:intergenic | 25.0% |
| ! | CACCAAAGTTATTATTTGAA+AGG | + | chr7.1:15724747-15724766 | None:intergenic | 25.0% |
| ! | CTTTCAAATAATAACTTTGG+TGG | - | chr7.1:15724745-15724764 | MS.gene42070:CDS | 25.0% |
| ! | GAAAATAATTATGCAACAGA+AGG | + | chr7.1:15726508-15726527 | None:intergenic | 25.0% |
| ! | GAAATATTGCAGATTTCATT+TGG | + | chr7.1:15725570-15725589 | None:intergenic | 25.0% |
| ! | GACCTTTCAAATAATAACTT+TGG | - | chr7.1:15724742-15724761 | MS.gene42070:CDS | 25.0% |
| ! | GCTGATAATAATAATCTTTC+TGG | - | chr7.1:15725321-15725340 | MS.gene42070:CDS | 25.0% |
| ! | TTCTCTTCTAATAAGTTTGA+AGG | - | chr7.1:15724817-15724836 | MS.gene42070:intron | 25.0% |
| !! | ATTTGAAGCTAAATTCAAGA+GGG | + | chr7.1:15725385-15725404 | None:intergenic | 25.0% |
| !! | TCTACTACATTCTTCATTTT+TGG | + | chr7.1:15727181-15727200 | None:intergenic | 25.0% |
| !! | TTGCATAATTATTTTCCCAA+TGG | - | chr7.1:15726512-15726531 | MS.gene42070:CDS | 25.0% |
| !!! | AATTATAGTTGGTTTGTCAT+TGG | + | chr7.1:15726201-15726220 | None:intergenic | 25.0% |
| !!! | CAAGTTTTTTAGGCAATAAA+GGG | - | chr7.1:15725964-15725983 | MS.gene42070:CDS | 25.0% |
| !!! | TCAAGTTTTTTAGGCAATAA+AGG | - | chr7.1:15725963-15725982 | MS.gene42070:CDS | 25.0% |
| AACTCTAAGCTCTTGATTTA+TGG | + | chr7.1:15724569-15724588 | None:intergenic | 30.0% | |
| AAGTTGTGGAAATCATTCAA+TGG | - | chr7.1:15724639-15724658 | MS.gene42070:CDS | 30.0% | |
| AATATCCCAACTGAACTTAA+GGG | - | chr7.1:15725852-15725871 | MS.gene42070:CDS | 30.0% | |
| ACAAACCAACTATAATTGCA+GGG | - | chr7.1:15726204-15726223 | MS.gene42070:CDS | 30.0% | |
| AGACTTCTTGAATTACAGTT+GGG | - | chr7.1:15725663-15725682 | MS.gene42070:CDS | 30.0% | |
| ATTAGCAACAACAGATTGAA+TGG | - | chr7.1:15725537-15725556 | MS.gene42070:CDS | 30.0% | |
| CAACAAGCAAATTATTGGAA+AGG | + | chr7.1:15724891-15724910 | None:intergenic | 30.0% | |
| CACAATTTCCAATTTCATGA+GGG | + | chr7.1:15725641-15725660 | None:intergenic | 30.0% | |
| CAGACAAAATTAATTCCTGT+AGG | + | chr7.1:15725452-15725471 | None:intergenic | 30.0% | |
| CGAAATAAAAACTGTCAAAC+CGG | + | chr7.1:15726093-15726112 | None:intergenic | 30.0% | |
| CTTTCAAATGTTGAGTTTGT+AGG | - | chr7.1:15724511-15724530 | MS.gene42070:CDS | 30.0% | |
| GGTAATATTCCTAAAACCAT+TGG | - | chr7.1:15725270-15725289 | MS.gene42070:CDS | 30.0% | |
| TAATATCCCAACTGAACTTA+AGG | - | chr7.1:15725851-15725870 | MS.gene42070:CDS | 30.0% | |
| TAGGAATATTACCTACTAGA+CGG | + | chr7.1:15725263-15725282 | None:intergenic | 30.0% | |
| TATCAGCTTCAAAGTATGTT+AGG | + | chr7.1:15725308-15725327 | None:intergenic | 30.0% | |
| TCATAAATGACATAGCCAAT+AGG | + | chr7.1:15726476-15726495 | None:intergenic | 30.0% | |
| TCCAATTCTAATGCTTGAAA+GGG | + | chr7.1:15725235-15725254 | None:intergenic | 30.0% | |
| TTAGCAACAACAGATTGAAT+GGG | - | chr7.1:15725538-15725557 | MS.gene42070:CDS | 30.0% | |
| TTATGGCATGTATTATAGCT+TGG | + | chr7.1:15724552-15724571 | None:intergenic | 30.0% | |
| TTCCAATTCTAATGCTTGAA+AGG | + | chr7.1:15725236-15725255 | None:intergenic | 30.0% | |
| TTCTCGAATAATCTATTTGG+AGG | - | chr7.1:15725900-15725919 | MS.gene42070:CDS | 30.0% | |
| TTGAAAAATAGTATACCTGG+TGG | + | chr7.1:15726806-15726825 | None:intergenic | 30.0% | |
| TTGAATCTGAATTCCATAAG+AGG | - | chr7.1:15725609-15725628 | MS.gene42070:CDS | 30.0% | |
| TTGCCTAAAAAACTTGAACT+AGG | + | chr7.1:15725960-15725979 | None:intergenic | 30.0% | |
| ! | CATTTGAAGCTAAATTCAAG+AGG | + | chr7.1:15725386-15725405 | None:intergenic | 30.0% |
| ! | CTAAGATTTCCAATGGTTTT+AGG | + | chr7.1:15725282-15725301 | None:intergenic | 30.0% |
| ! | CTACAGGAATTAATTTTGTC+TGG | - | chr7.1:15725450-15725469 | MS.gene42070:CDS | 30.0% |
| ! | CTCACTCAGAATAATTTTAG+TGG | - | chr7.1:15725177-15725196 | MS.gene42070:CDS | 30.0% |
| ! | CTCTTGAATTTAGCTTCAAA+TGG | - | chr7.1:15725384-15725403 | MS.gene42070:CDS | 30.0% |
| ! | CTTTCTAGTAATCAATTGAG+TGG | - | chr7.1:15724961-15724980 | MS.gene42070:CDS | 30.0% |
| !! | CGGTTTGACAGTTTTTATTT+CGG | - | chr7.1:15726091-15726110 | MS.gene42070:CDS | 30.0% |
| !! | CTTTCCAATAATTTGCTTGT+TGG | - | chr7.1:15724889-15724908 | MS.gene42070:intron | 30.0% |
| !! | TAGCTTCAAATGGATTTTCT+GGG | - | chr7.1:15725394-15725413 | MS.gene42070:CDS | 30.0% |
| !! | TTAGCTTCAAATGGATTTTC+TGG | - | chr7.1:15725393-15725412 | MS.gene42070:CDS | 30.0% |
| !!! | AGTCCTAGTTCAAGTTTTTT+AGG | - | chr7.1:15725954-15725973 | MS.gene42070:CDS | 30.0% |
| !!! | ATTCTTCATTTTTGGTCGTT+TGG | + | chr7.1:15727173-15727192 | None:intergenic | 30.0% |
| !!! | GTTTTGGAATATCACCAAAT+AGG | + | chr7.1:15725482-15725501 | None:intergenic | 30.0% |
| AACATTCCCTTAAGTTCAGT+TGG | + | chr7.1:15725861-15725880 | None:intergenic | 35.0% | |
| AACCTGAATATAAGCCTGAT+TGG | - | chr7.1:15726570-15726589 | MS.gene42070:CDS | 35.0% | |
| AACTTTCAGCTCAGTTTACA+AGG | - | chr7.1:15726316-15726335 | MS.gene42070:CDS | 35.0% | |
| AAGCTGATACAATGTTCCAT+TGG | + | chr7.1:15726531-15726550 | None:intergenic | 35.0% | |
| AAGCTTAGTACAGTTTCCTT+TGG | - | chr7.1:15727085-15727104 | MS.gene42070:CDS | 35.0% | |
| ACATTCCCTTAAGTTCAGTT+GGG | + | chr7.1:15725860-15725879 | None:intergenic | 35.0% | |
| ACATTTCAGATTACTGCACT+TGG | - | chr7.1:15724608-15724627 | MS.gene42070:CDS | 35.0% | |
| AGATGATAAGAGAACTCGAA+AGG | - | chr7.1:15726417-15726436 | MS.gene42070:CDS | 35.0% | |
| AGCTGATACAATGTTCCATT+GGG | + | chr7.1:15726530-15726549 | None:intergenic | 35.0% | |
| AGCTTCTTCATGAATCAACA+AGG | - | chr7.1:15726546-15726565 | MS.gene42070:CDS | 35.0% | |
| ATAAGTTGTCCAAACTCTTG+TGG | + | chr7.1:15725426-15725445 | None:intergenic | 35.0% | |
| ATCCATCTTGACATTTCTTC+TGG | - | chr7.1:15726659-15726678 | MS.gene42070:CDS | 35.0% | |
| ATGAGAATCGTTTAGATGGT+AGG | - | chr7.1:15725037-15725056 | MS.gene42070:CDS | 35.0% | |
| ATGTTTGCATCATTCCATTC+AGG | + | chr7.1:15724592-15724611 | None:intergenic | 35.0% | |
| CAACTGTAATTCAAGAAGTC+TGG | + | chr7.1:15725664-15725683 | None:intergenic | 35.0% | |
| CAGACTTCTTGAATTACAGT+TGG | - | chr7.1:15725662-15725681 | MS.gene42070:CDS | 35.0% | |
| CTCACCAACAAGCAAATTAT+TGG | + | chr7.1:15724896-15724915 | None:intergenic | 35.0% | |
| CTCTCGATGTTTCAAACAAT+CGG | - | chr7.1:15725820-15725839 | MS.gene42070:CDS | 35.0% | |
| GACAAACCAACTATAATTGC+AGG | - | chr7.1:15726203-15726222 | MS.gene42070:CDS | 35.0% | |
| GACTTCTTGAATTACAGTTG+GGG | - | chr7.1:15725664-15725683 | MS.gene42070:CDS | 35.0% | |
| GAGTTACCAATTGAACTTCA+TGG | - | chr7.1:15724913-15724932 | MS.gene42070:intron | 35.0% | |
| GCACAATTTCCAATTTCATG+AGG | + | chr7.1:15725642-15725661 | None:intergenic | 35.0% | |
| GCTTATGAGAATCGTTTAGA+TGG | - | chr7.1:15725033-15725052 | MS.gene42070:CDS | 35.0% | |
| GTTCTCTTATCATCTTGTTC+TGG | + | chr7.1:15726412-15726431 | None:intergenic | 35.0% | |
| TAGGCTACTAAGATTTCCAA+TGG | + | chr7.1:15725289-15725308 | None:intergenic | 35.0% | |
| TCACCAAAATCTTCTTCAAC+AGG | + | chr7.1:15726992-15727011 | None:intergenic | 35.0% | |
| TGTCGATAATCTACAACAAG+CGG | - | chr7.1:15726235-15726254 | MS.gene42070:CDS | 35.0% | |
| TTAGTACAGTTTCCTTTGGT+TGG | - | chr7.1:15727089-15727108 | MS.gene42070:CDS | 35.0% | |
| TTCTGTAAGAAACCTTGTGA+TGG | + | chr7.1:15726049-15726068 | None:intergenic | 35.0% | |
| TTGAGCTTCAATCATCTTCA+CGG | - | chr7.1:15725756-15725775 | MS.gene42070:CDS | 35.0% | |
| TTGTCTGGAAATAGCCTATT+TGG | - | chr7.1:15725465-15725484 | MS.gene42070:CDS | 35.0% | |
| TTTAGGCCATGAAGTTCAAT+TGG | + | chr7.1:15724922-15724941 | None:intergenic | 35.0% | |
| ! | ACCATCAAGCATTTTCACTT+CGG | - | chr7.1:15725134-15725153 | MS.gene42070:CDS | 35.0% |
| ! | AGACTTTTGCAACTGAGAAT+TGG | + | chr7.1:15725504-15725523 | None:intergenic | 35.0% |
| ! | AGGTTAAGTATTTGAAGCTC+GGG | + | chr7.1:15725087-15725106 | None:intergenic | 35.0% |
| ! | CAGGTTAAGTATTTGAAGCT+CGG | + | chr7.1:15725088-15725107 | None:intergenic | 35.0% |
| ! | CTTCCTGTTGAAGAAGATTT+TGG | - | chr7.1:15726986-15727005 | MS.gene42070:CDS | 35.0% |
| ! | TCTTTCTGGTGAACTAGTTT+CGG | - | chr7.1:15725335-15725354 | MS.gene42070:CDS | 35.0% |
| ! | TTCTTCTGGCAATGTTCTTT+TGG | - | chr7.1:15726673-15726692 | MS.gene42070:CDS | 35.0% |
| !! | AATTTTAGTGGTGATCTTCC+TGG | - | chr7.1:15725189-15725208 | MS.gene42070:CDS | 35.0% |
| !! | ATAGTTGGTTTGTCATTGGT+TGG | + | chr7.1:15726197-15726216 | None:intergenic | 35.0% |
| !! | ATTTTAGTGGTGATCTTCCT+GGG | - | chr7.1:15725190-15725209 | MS.gene42070:CDS | 35.0% |
| !! | GATTGATTCCTCCTGATTTT+GGG | - | chr7.1:15724767-15724786 | MS.gene42070:CDS | 35.0% |
| !! | GTTGAAGAAGATTTTGGTGA+AGG | - | chr7.1:15726992-15727011 | MS.gene42070:CDS | 35.0% |
| !! | TTGCAACTGAGAATTGGTTT+TGG | + | chr7.1:15725498-15725517 | None:intergenic | 35.0% |
| !!! | GACCAACTTGAGAGTTTTTT+CGG | - | chr7.1:15725011-15725030 | MS.gene42070:CDS | 35.0% |
| !!! | GAGTGGTTTTATACCTTCTT+GGG | - | chr7.1:15724978-15724997 | MS.gene42070:CDS | 35.0% |
| !!! | TGAGTGGTTTTATACCTTCT+TGG | - | chr7.1:15724977-15724996 | MS.gene42070:CDS | 35.0% |
| !!! | TTGTCTAGTTTTCCCAATTC+TGG | + | chr7.1:15725792-15725811 | None:intergenic | 35.0% |
| AACGGTACAAATGTTGGTAC+AGG | + | chr7.1:15725927-15725946 | None:intergenic | 40.0% | |
| AACTTGAACTAGGACTCTTC+TGG | + | chr7.1:15725950-15725969 | None:intergenic | 40.0% | |
| AAGAGCTTAGAGTTCCTGAA+TGG | - | chr7.1:15724575-15724594 | MS.gene42070:CDS | 40.0% | |
| ACAGTCCCTGCAATTATAGT+TGG | + | chr7.1:15726212-15726231 | None:intergenic | 40.0% | |
| ACGGTACAAATGTTGGTACA+GGG | + | chr7.1:15725926-15725945 | None:intergenic | 40.0% | |
| AGCCGAAAAAACTCTCAAGT+TGG | + | chr7.1:15725016-15725035 | None:intergenic | 40.0% | |
| ATCTCAATCTCTCCAACCAA+TGG | + | chr7.1:15726713-15726732 | None:intergenic | 40.0% | |
| ATTGGAAACAACCGTCTAGT+AGG | - | chr7.1:15725249-15725268 | MS.gene42070:CDS | 40.0% | |
| CATTTCTTTCCTCCAACCAA+AGG | + | chr7.1:15727104-15727123 | None:intergenic | 40.0% | |
| CCAGGAAATGTTTACAGCTA+TGG | - | chr7.1:15726932-15726951 | MS.gene42070:CDS | 40.0% | |
| CCATAGCTGTAAACATTTCC+TGG | + | chr7.1:15726935-15726954 | None:intergenic | 40.0% | |
| CCTCCACATGAAAAGTTCAA+GGG | + | chr7.1:15726002-15726021 | None:intergenic | 40.0% | |
| CTCTTATCATCTTGTTCTGG+TGG | + | chr7.1:15726409-15726428 | None:intergenic | 40.0% | |
| CTTGCTCACAAGAATCTTAG+AGG | - | chr7.1:15724676-15724695 | MS.gene42070:CDS | 40.0% | |
| GAAAATCTTGTGCGACCTAT+TGG | - | chr7.1:15726458-15726477 | MS.gene42070:CDS | 40.0% | |
| GCAACTCCTGCAATTTCTTT+AGG | + | chr7.1:15724939-15724958 | None:intergenic | 40.0% | |
| GCCCTTTCAAGCATTAGAAT+TGG | - | chr7.1:15725231-15725250 | MS.gene42070:CDS | 40.0% | |
| GGAATCAAGCCTAGATTATC+AGG | + | chr7.1:15725066-15725085 | None:intergenic | 40.0% | |
| GGATAATTGCGACATGATGA+AGG | + | chr7.1:15726643-15726662 | None:intergenic | 40.0% | |
| GGGAATGTTAAGCTTGATAG+AGG | - | chr7.1:15725872-15725891 | MS.gene42070:CDS | 40.0% | |
| GGTAGGATTCCTGATAATCT+AGG | - | chr7.1:15725054-15725073 | MS.gene42070:CDS | 40.0% | |
| GGTTCAATTCCATCACAGTT+TGG | - | chr7.1:15724838-15724857 | MS.gene42070:intron | 40.0% | |
| GGTTGGATCATCAACAATAC+CGG | + | chr7.1:15726180-15726199 | None:intergenic | 40.0% | |
| GGTTTCTTACAGAATCGTAC+TGG | - | chr7.1:15726055-15726074 | MS.gene42070:CDS | 40.0% | |
| GTTTCAAACAATCGGCTATC+AGG | - | chr7.1:15725828-15725847 | MS.gene42070:CDS | 40.0% | |
| TCAATTCCATCACAGTTTGG+TGG | - | chr7.1:15724841-15724860 | MS.gene42070:intron | 40.0% | |
| TCAGACAAACTCCCAAAATC+AGG | + | chr7.1:15724781-15724800 | None:intergenic | 40.0% | |
| TCATGGCCTAAAGAAATTGC+AGG | - | chr7.1:15724930-15724949 | MS.gene42070:CDS | 40.0% | |
| TGCCAGAAGAAATGTCAAGA+TGG | + | chr7.1:15726664-15726683 | None:intergenic | 40.0% | |
| TGGACAACTTATGAACCTAC+AGG | - | chr7.1:15725434-15725453 | MS.gene42070:CDS | 40.0% | |
| TTAGGCAATAAAGGGCTTTG+TGG | - | chr7.1:15725972-15725991 | MS.gene42070:CDS | 40.0% | |
| TTATCATCTTGTTCTGGTGG+TGG | + | chr7.1:15726406-15726425 | None:intergenic | 40.0% | |
| TTCATAGTGCTCCTGTAAGA+GGG | - | chr7.1:15727035-15727054 | MS.gene42070:CDS | 40.0% | |
| TTCGGGAAAACTAGAAGTTC+TGG | - | chr7.1:15725152-15725171 | MS.gene42070:CDS | 40.0% | |
| TTCTAATGCTTGAAAGGGCA+TGG | + | chr7.1:15725230-15725249 | None:intergenic | 40.0% | |
| TTGGGGAGTAACTATTTGAC+TGG | - | chr7.1:15725681-15725700 | MS.gene42070:CDS | 40.0% | |
| TTTCCCAATTCTGGTGGTAA+TGG | + | chr7.1:15725783-15725802 | None:intergenic | 40.0% | |
| TTTGCATCAAGTATCTGCTC+TGG | + | chr7.1:15727067-15727086 | None:intergenic | 40.0% | |
| ! | AAGGCGTAGATTTGGTTAAG+TGG | - | chr7.1:15727011-15727030 | MS.gene42070:CDS | 40.0% |
| ! | AGAAATGCTTGCTGCTCTAA+AGG | - | chr7.1:15727117-15727136 | MS.gene42070:CDS | 40.0% |
| ! | AGGCGTAGATTTGGTTAAGT+GGG | - | chr7.1:15727012-15727031 | MS.gene42070:CDS | 40.0% |
| ! | ATGGTATTGAACCTTCAAGC+TGG | + | chr7.1:15725119-15725138 | None:intergenic | 40.0% |
| ! | CCATCAAGCATTTTCACTTC+GGG | - | chr7.1:15725135-15725154 | MS.gene42070:CDS | 40.0% |
| ! | GTTTTATACCTTCTTGGGTG+GGG | - | chr7.1:15724983-15725002 | MS.gene42070:CDS | 40.0% |
| ! | TGTTGTTTATGATCCGAGAG+AGG | - | chr7.1:15726129-15726148 | MS.gene42070:CDS | 40.0% |
| ! | TTTTAGTGGTGATCTTCCTG+GGG | - | chr7.1:15725191-15725210 | MS.gene42070:CDS | 40.0% |
| !! | AGAATCGTACTGGCTGTAAT+TGG | - | chr7.1:15726065-15726084 | MS.gene42070:CDS | 40.0% |
| !! | GGATTGATTCCTCCTGATTT+TGG | - | chr7.1:15724766-15724785 | MS.gene42070:CDS | 40.0% |
| !! | GGTTTTATACCTTCTTGGGT+GGG | - | chr7.1:15724982-15725001 | MS.gene42070:CDS | 40.0% |
| !! | TTCTGGAACGGTACAAATGT+TGG | + | chr7.1:15725933-15725952 | None:intergenic | 40.0% |
| !! | TTTTGGTGAAGGCGTAGATT+TGG | - | chr7.1:15727003-15727022 | MS.gene42070:CDS | 40.0% |
| !!! | TCTAGTTTTCCCAATTCTGG+TGG | + | chr7.1:15725789-15725808 | None:intergenic | 40.0% |
| !!! | TGGTTTTATACCTTCTTGGG+TGG | - | chr7.1:15724981-15725000 | MS.gene42070:CDS | 40.0% |
| !!! | TTCATTTTTGGTCGTTTGGC+TGG | + | chr7.1:15727169-15727188 | None:intergenic | 40.0% |
| AAACTTCTCGATCCAACCAG+AGG | - | chr7.1:15726737-15726756 | MS.gene42070:CDS | 45.0% | |
| ACCTGGTGGTATGTAACCAA+AGG | + | chr7.1:15726792-15726811 | None:intergenic | 45.0% | |
| AGATTACTGCACTTGGCAAG+GGG | - | chr7.1:15724615-15724634 | MS.gene42070:CDS | 45.0% | |
| ATGAGGGATCTCTCCTCTTA+TGG | + | chr7.1:15725625-15725644 | None:intergenic | 45.0% | |
| CAGATTACTGCACTTGGCAA+GGG | - | chr7.1:15724614-15724633 | MS.gene42070:CDS | 45.0% | |
| CCCGAAGTGAAAATGCTTGA+TGG | + | chr7.1:15725138-15725157 | None:intergenic | 45.0% | |
| CTGCATTCTAACCAGCTTGA+AGG | - | chr7.1:15725105-15725124 | MS.gene42070:CDS | 45.0% | |
| CTTCAAGCTGGTTAGAATGC+AGG | + | chr7.1:15725107-15725126 | None:intergenic | 45.0% | |
| GACAAACTCCCAAAATCAGG+AGG | + | chr7.1:15724778-15724797 | None:intergenic | 45.0% | |
| GCAAACTTCAAGCCATTGGT+TGG | - | chr7.1:15726698-15726717 | MS.gene42070:CDS | 45.0% | |
| GCAAGAAAAAGCAGCCAAAG+AGG | - | chr7.1:15726151-15726170 | MS.gene42070:CDS | 45.0% | |
| GCCTCCACATGAAAAGTTCA+AGG | + | chr7.1:15726003-15726022 | None:intergenic | 45.0% | |
| GGACCATTACCACCAGAATT+GGG | - | chr7.1:15725777-15725796 | MS.gene42070:CDS | 45.0% | |
| GGAGAGATCCCTCATGAAAT+TGG | - | chr7.1:15725630-15725649 | MS.gene42070:CDS | 45.0% | |
| GGATGCAAACTTCAAGCCAT+TGG | - | chr7.1:15726694-15726713 | MS.gene42070:CDS | 45.0% | |
| GGCCAATCAGGCTTATATTC+AGG | + | chr7.1:15726575-15726594 | None:intergenic | 45.0% | |
| GGTCAGGAGACTAAAATCTG+TGG | - | chr7.1:15726367-15726386 | MS.gene42070:CDS | 45.0% | |
| GTACAGTTTCCTTTGGTTGG+AGG | - | chr7.1:15727092-15727111 | MS.gene42070:CDS | 45.0% | |
| GTTCATAGTGCTCCTGTAAG+AGG | - | chr7.1:15727034-15727053 | MS.gene42070:CDS | 45.0% | |
| TCACAGTAGTGACCATCACA+AGG | - | chr7.1:15726034-15726053 | MS.gene42070:CDS | 45.0% | |
| TCAGATTACTGCACTTGGCA+AGG | - | chr7.1:15724613-15724632 | MS.gene42070:CDS | 45.0% | |
| TCATAGTGCTCCTGTAAGAG+GGG | - | chr7.1:15727036-15727055 | MS.gene42070:CDS | 45.0% | |
| TCCTTTGGTTACATACCACC+AGG | - | chr7.1:15726788-15726807 | MS.gene42070:CDS | 45.0% | |
| TGGTATGTAACCAAAGGAGC+CGG | + | chr7.1:15726786-15726805 | None:intergenic | 45.0% | |
| TTCCTGATGTGACTGATCTC+AGG | + | chr7.1:15725717-15725736 | None:intergenic | 45.0% | |
| ! | CAACAGGAAGTCGAGTTGTA+AGG | + | chr7.1:15726976-15726995 | None:intergenic | 45.0% |
| ! | CCCTTGAACTTTTCATGTGG+AGG | - | chr7.1:15725999-15726018 | MS.gene42070:CDS | 45.0% |
| ! | GAACTAGGACTCTTCTGGAA+CGG | + | chr7.1:15725945-15725964 | None:intergenic | 45.0% |
| ! | GAGCCCTTGAACTTTTCATG+TGG | - | chr7.1:15725996-15726015 | MS.gene42070:CDS | 45.0% |
| !! | CAGCTATGGTGTTGTTCTGT+TGG | - | chr7.1:15726946-15726965 | MS.gene42070:CDS | 45.0% |
| !! | GTACTGGCTGTAATTGGTTC+CGG | - | chr7.1:15726071-15726090 | MS.gene42070:CDS | 45.0% |
| !! | GTTTGTAGGTGCTGAGTTAC+AGG | - | chr7.1:15724525-15724544 | MS.gene42070:CDS | 45.0% |
| !! | TTTTGGGAGTTTGTCTGAGC+TGG | - | chr7.1:15724783-15724802 | MS.gene42070:CDS | 45.0% |
| !!! | CTGCTTTTTCTTGCCTCTCT+CGG | + | chr7.1:15726145-15726164 | None:intergenic | 45.0% |
| AACAATACCGGCAGCCTCTT+TGG | + | chr7.1:15726168-15726187 | None:intergenic | 50.0% | |
| ACCGATAAGACCACACCAGA+AGG | + | chr7.1:15726350-15726369 | None:intergenic | 50.0% | |
| ACTTGGCAAGGGGTAAGTTG+TGG | - | chr7.1:15724625-15724644 | MS.gene42070:CDS | 50.0% | |
| ATACTTCCGGTACCTCTGGT+TGG | + | chr7.1:15726752-15726771 | None:intergenic | 50.0% | |
| ATGGCAATGGATAGCCTAGC+AGG | + | chr7.1:15726596-15726615 | None:intergenic | 50.0% | |
| CGGACCATTACCACCAGAAT+TGG | - | chr7.1:15725776-15725795 | MS.gene42070:CDS | 50.0% | |
| CTCCTGAGATCAGTCACATC+AGG | - | chr7.1:15725712-15725731 | MS.gene42070:CDS | 50.0% | |
| CTGAGACCACCAAACTGTGA+TGG | + | chr7.1:15724850-15724869 | None:intergenic | 50.0% | |
| CTGATGTGACTGATCTCAGG+AGG | + | chr7.1:15725714-15725733 | None:intergenic | 50.0% | |
| GACTCGAATAAGCTCAGCAG+TGG | - | chr7.1:15726293-15726312 | MS.gene42070:CDS | 50.0% | |
| GCTAGGCTATCCATTGCCAT+CGG | - | chr7.1:15726596-15726615 | MS.gene42070:CDS | 50.0% | |
| GCTTATACTTCCGGTACCTC+TGG | + | chr7.1:15726756-15726775 | None:intergenic | 50.0% | |
| GGCAACTGCGCTTATACTTC+CGG | + | chr7.1:15726765-15726784 | None:intergenic | 50.0% | |
| GGGACGATTCCACAAGAGTT+TGG | - | chr7.1:15725414-15725433 | MS.gene42070:CDS | 50.0% | |
| GGTGATCTTCCTGGGGAAAT+TGG | - | chr7.1:15725198-15725217 | MS.gene42070:CDS | 50.0% | |
| GTCAAATTCCCCACCCAAGA+AGG | + | chr7.1:15724994-15725013 | None:intergenic | 50.0% | |
| TAAGACCACACCAGAAGGCA+TGG | + | chr7.1:15726345-15726364 | None:intergenic | 50.0% | |
| TACAAGGCAACCATGCCTTC+TGG | - | chr7.1:15726332-15726351 | MS.gene42070:CDS | 50.0% | |
| TCGCGTTAACGACAGCATCA+AGG | + | chr7.1:15726265-15726284 | None:intergenic | 50.0% | |
| TCGTTTGGCTGGTGTGCTAT+CGG | + | chr7.1:15727158-15727177 | None:intergenic | 50.0% | |
| TGTGCTATCGGTGCAAAGCA+AGG | + | chr7.1:15727146-15727165 | None:intergenic | 50.0% | |
| ! | GGAAGTATAAGCGCAGTTGC+CGG | - | chr7.1:15726764-15726783 | MS.gene42070:CDS | 50.0% |
| ! | TCTGGAGTTTCCCCTCTTAC+AGG | + | chr7.1:15727049-15727068 | None:intergenic | 50.0% |
| !! | ATAAGCCTGATTGGCCTGCT+AGG | - | chr7.1:15726579-15726598 | MS.gene42070:CDS | 50.0% |
| !! | GCCTTCTGGTGTGGTCTTAT+CGG | - | chr7.1:15726346-15726365 | MS.gene42070:CDS | 50.0% |
| AAAGCAGCCAAAGAGGCTGC+CGG | - | chr7.1:15726158-15726177 | MS.gene42070:CDS | 55.0% | |
| ACCATGCAAGTGACAGCACC+AGG | - | chr7.1:15726914-15726933 | MS.gene42070:CDS | 55.0% | |
| ATTGCCATCGGTGTGGCAGA+AGG | - | chr7.1:15726608-15726627 | MS.gene42070:CDS | 55.0% | |
| GATAGCCTAGCAGGCCAATC+AGG | + | chr7.1:15726587-15726606 | None:intergenic | 55.0% | |
| GCTATCCATTGCCATCGGTG+TGG | - | chr7.1:15726601-15726620 | MS.gene42070:CDS | 55.0% | |
| TGGCAGTTGCCAATTTCCCC+AGG | + | chr7.1:15725210-15725229 | None:intergenic | 55.0% | |
| TTCTGCCACACCGATGGCAA+TGG | + | chr7.1:15726609-15726628 | None:intergenic | 55.0% | |
| ! | CTCGATCCAACCAGAGGTAC+CGG | - | chr7.1:15726743-15726762 | MS.gene42070:CDS | 55.0% |
| !! | CTGGTGTGGTCTTATCGGTC+AGG | - | chr7.1:15726351-15726370 | MS.gene42070:CDS | 55.0% |
| !! | TCCTGGTGCTGTCACTTGCA+TGG | + | chr7.1:15726918-15726937 | None:intergenic | 55.0% |
| CAAGCCTTCTGCCACACCGA+TGG | + | chr7.1:15726615-15726634 | None:intergenic | 60.0% | |
| CATCGGTGTGGCAGAAGGCT+TGG | - | chr7.1:15726613-15726632 | MS.gene42070:CDS | 60.0% | |
| GGCAACCATGCCTTCTGGTG+TGG | - | chr7.1:15726337-15726356 | MS.gene42070:CDS | 60.0% | |
| !! | AGCGCAGTTGCCGGCTCCTT+TGG | - | chr7.1:15726773-15726792 | MS.gene42070:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 15724503 | 15727222 | 15724503 | ID=MS.gene42070 |
| chr7.1 | mRNA | 15724503 | 15727222 | 15724503 | ID=MS.gene42070.t1;Parent=MS.gene42070 |
| chr7.1 | exon | 15724916 | 15727222 | 15724916 | ID=MS.gene42070.t1.exon1;Parent=MS.gene42070.t1 |
| chr7.1 | CDS | 15724916 | 15727222 | 15724916 | ID=cds.MS.gene42070.t1;Parent=MS.gene42070.t1 |
| chr7.1 | exon | 15724503 | 15724822 | 15724503 | ID=MS.gene42070.t1.exon2;Parent=MS.gene42070.t1 |
| chr7.1 | CDS | 15724503 | 15724822 | 15724503 | ID=cds.MS.gene42070.t1;Parent=MS.gene42070.t1 |
| Gene Sequence |
| Protein sequence |
