Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42239.t1 | XP_003623846.1 | 97.1 | 349 | 9 | 1 | 1 | 348 | 1 | 349 | 4.40E-185 | 657.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42239.t1 | O65090 | 67.8 | 311 | 93 | 2 | 38 | 348 | 40 | 343 | 3.3e-112 | 406.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42239.t1 | A2Q3P9 | 97.1 | 349 | 9 | 1 | 1 | 348 | 1 | 349 | 3.2e-185 | 657.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051364 | MS.gene42239 | -0.825847 | 3.75E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene42239 | -0.821493 | 3.92E-53 | -1.69E-46 |
| MS.gene051367 | MS.gene42239 | -0.815209 | 1.04E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene42239 | 0.811861 | 5.67E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene42239 | 0.817831 | 2.69E-52 | -1.69E-46 |
| MS.gene053421 | MS.gene42239 | -0.804267 | 2.34E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene42239 | 0.801189 | 1.01E-48 | -1.69E-46 |
| MS.gene05912 | MS.gene42239 | 0.816554 | 5.21E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene42239 | 0.815652 | 8.28E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene42239 | 0.800914 | 1.15E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42239.t1 | MTR_7g076280 | 97.135 | 349 | 9 | 1 | 1 | 348 | 1 | 349 | 0.0 | 693 |
| MS.gene42239.t1 | MTR_3g007750 | 31.760 | 233 | 134 | 6 | 73 | 302 | 23 | 233 | 1.72e-22 | 97.1 |
| MS.gene42239.t1 | MTR_5g021210 | 29.268 | 246 | 144 | 7 | 78 | 317 | 34 | 255 | 1.35e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42239.t1 | AT1G01860 | 67.846 | 311 | 93 | 2 | 38 | 348 | 40 | 343 | 9.21e-151 | 428 |
| MS.gene42239.t1 | AT1G01860 | 66.552 | 290 | 90 | 2 | 38 | 327 | 40 | 322 | 3.29e-136 | 391 |
| MS.gene42239.t1 | AT1G01860 | 70.076 | 264 | 79 | 0 | 85 | 348 | 1 | 264 | 1.17e-132 | 379 |
| MS.gene42239.t1 | AT1G01860 | 68.724 | 243 | 76 | 0 | 85 | 327 | 1 | 243 | 4.21e-118 | 342 |
| MS.gene42239.t1 | AT1G01860 | 66.184 | 207 | 63 | 2 | 38 | 244 | 40 | 239 | 2.81e-92 | 276 |
| MS.gene42239.t1 | AT2G47420 | 32.479 | 234 | 132 | 6 | 73 | 302 | 25 | 236 | 7.22e-23 | 98.2 |
| MS.gene42239.t1 | AT5G66360 | 27.240 | 279 | 166 | 7 | 78 | 341 | 65 | 321 | 1.37e-20 | 92.0 |
| MS.gene42239.t1 | AT5G66360 | 34.000 | 150 | 79 | 3 | 78 | 224 | 65 | 197 | 6.14e-15 | 75.5 |
Find 76 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGATGTGGTGCTGGAAAT+TGG | 0.189630 | 7.3:+29529256 | MS.gene42239:CDS |
| AGATCCTGAGTACAAATTTA+AGG | 0.247250 | 7.3:+29531522 | MS.gene42239:intron |
| TCATCCAAGGTTAGTTCTTC+AGG | 0.295643 | 7.3:-29533594 | None:intergenic |
| TTCCAAACAATGATGATATA+TGG | 0.300819 | 7.3:-29530339 | None:intergenic |
| AAATTCTGGTGCATTTGTTC+TGG | 0.332103 | 7.3:+29529312 | MS.gene42239:CDS |
| GACATAAATGAGCAACTTGT+TGG | 0.349463 | 7.3:+29529214 | MS.gene42239:CDS |
| TTCTACGTAGCTTGCGGCCG+TGG | 0.365490 | 7.3:+29528326 | MS.gene42239:CDS |
| TTGGTCAAGGAACCAGTTCC+TGG | 0.367941 | 7.3:-29529280 | None:intergenic |
| ACCAATACTCTAATAAATTC+TGG | 0.369289 | 7.3:+29529298 | MS.gene42239:CDS |
| TACCTTCAACTTTCCTGTAC+TGG | 0.383159 | 7.3:-29529729 | None:intergenic |
| GCATGGTAATCGTCTTTGTT+TGG | 0.387600 | 7.3:-29528368 | None:intergenic |
| AAATGCAAACTGCTACTCTT+TGG | 0.400726 | 7.3:-29533643 | None:intergenic |
| AGGAGGAGACTGCTCTGCGC+TGG | 0.401092 | 7.3:+29531091 | MS.gene42239:intron |
| ACCAGAATTTATTAGAGTAT+TGG | 0.407064 | 7.3:-29529299 | None:intergenic |
| TGGTTTGTGGCGGGAGTTGA+AGG | 0.414978 | 7.3:-29528264 | None:intergenic |
| TCCCATATATCATCATTGTT+TGG | 0.419065 | 7.3:+29530337 | MS.gene42239:CDS |
| CTGGAAATTGGGCCAGGAAC+TGG | 0.421203 | 7.3:+29529268 | MS.gene42239:CDS |
| GAAATTAACAAATATATTGA+TGG | 0.429643 | 7.3:-29531148 | None:intergenic |
| TCCAAACAATGATGATATAT+GGG | 0.436718 | 7.3:-29530338 | None:intergenic |
| ATTTGTTCTGGCGGTTGAAA+AGG | 0.442610 | 7.3:+29529324 | MS.gene42239:CDS |
| ATATTGATGGGACGATACTC+AGG | 0.448686 | 7.3:-29531135 | None:intergenic |
| CTAAAGCTTCTTCTATCTCA+AGG | 0.450868 | 7.3:-29533401 | None:intergenic |
| TCGCGGCAGTGGTTTGTGGC+GGG | 0.451644 | 7.3:-29528273 | None:intergenic |
| GATTTCGCGGCAGTGGTTTG+TGG | 0.461430 | 7.3:-29528277 | None:intergenic |
| GAGCAACTTGTTGGCGTGGC+TGG | 0.461521 | 7.3:+29529223 | MS.gene42239:CDS |
| AGAAGTGGTTCTCTTGCTCC+AGG | 0.465553 | 7.3:+29530949 | MS.gene42239:CDS |
| GTGATGTGGTGCTGGAAATT+GGG | 0.468675 | 7.3:+29529257 | MS.gene42239:CDS |
| ATATTTGTTAATTTCTACTC+AGG | 0.473995 | 7.3:+29531156 | MS.gene42239:CDS |
| GAAATCCTACCGGCGACAAC+CGG | 0.474536 | 7.3:+29528294 | MS.gene42239:CDS |
| CGAGGAAGGTGATGTGGTGC+TGG | 0.488746 | 7.3:+29529249 | MS.gene42239:CDS |
| CTGAGAAAATGTCACCCATT+GGG | 0.495416 | 7.3:-29530928 | None:intergenic |
| AAGGTTGCGTTGTGAGATAT+TGG | 0.496294 | 7.3:-29528245 | None:intergenic |
| TTCCAGTACAGGAAAGTTGA+AGG | 0.501060 | 7.3:+29529727 | MS.gene42239:CDS |
| CCGGTAGGATTTCGCGGCAG+TGG | 0.508498 | 7.3:-29528284 | None:intergenic |
| GCGACCTTAAATTTGTACTC+AGG | 0.518265 | 7.3:-29531526 | None:intergenic |
| TACTCAGGGGTCCGGAGCGA+TGG | 0.528890 | 7.3:-29531120 | None:intergenic |
| TCGAAGCTCTGTTGTTTCCA+CGG | 0.529768 | 7.3:-29528343 | None:intergenic |
| GGAGGAGACTGCTCTGCGCT+GGG | 0.531734 | 7.3:+29531092 | MS.gene42239:intron |
| GATCAAATTACTACTCCCAA+TGG | 0.538395 | 7.3:+29530913 | MS.gene42239:CDS |
| TTGCGTTGTGAGATATTGGC+GGG | 0.539331 | 7.3:-29528241 | None:intergenic |
| TTGTCGCCGGTAGGATTTCG+CGG | 0.541168 | 7.3:-29528290 | None:intergenic |
| TGGGACGATACTCAGGGGTC+CGG | 0.546774 | 7.3:-29531128 | None:intergenic |
| ATCAAATTACTACTCCCAAT+GGG | 0.548471 | 7.3:+29530914 | MS.gene42239:CDS |
| TAAAGCTTCTTCTATCTCAA+GGG | 0.550131 | 7.3:-29533400 | None:intergenic |
| TCTGAGAAAATGTCACCCAT+TGG | 0.554276 | 7.3:-29530929 | None:intergenic |
| GTGGTGCTGGAAATTGGGCC+AGG | 0.554886 | 7.3:+29529262 | MS.gene42239:CDS |
| ATATCACTTACATTAGGCTG+AGG | 0.555378 | 7.3:-29531565 | None:intergenic |
| CCACTGCCGCGAAATCCTAC+CGG | 0.556187 | 7.3:+29528284 | MS.gene42239:CDS |
| AAGGCCTGAAGAACTAACCT+TGG | 0.561316 | 7.3:+29533590 | MS.gene42239:CDS |
| GGCGTGGCTGGTGTCGAGGA+AGG | 0.563328 | 7.3:+29529235 | MS.gene42239:CDS |
| GAAACTTGGGGATATTCTGA+TGG | 0.565564 | 7.3:-29532529 | None:intergenic |
| TTCGCGGCAGTGGTTTGTGG+CGG | 0.566211 | 7.3:-29528274 | None:intergenic |
| ACATCTGTACTGATATAGAA+AGG | 0.568986 | 7.3:-29530890 | None:intergenic |
| AAATTAACAAATATATTGAT+GGG | 0.571638 | 7.3:-29531147 | None:intergenic |
| CGACTCCGGTTGTCGCCGGT+AGG | 0.585962 | 7.3:-29528299 | None:intergenic |
| GAAGAAGCTTTAGAAAGCAT+AGG | 0.591998 | 7.3:+29533411 | MS.gene42239:CDS |
| TTCTGGTGCATTTGTTCTGG+CGG | 0.595156 | 7.3:+29529315 | MS.gene42239:CDS |
| GTTGCGTTGTGAGATATTGG+CGG | 0.595275 | 7.3:-29528242 | None:intergenic |
| CATTGCATAGGATAAACACA+TGG | 0.598047 | 7.3:+29529682 | MS.gene42239:intron |
| CTCAAAGCTCTCAACTCCAA+AGG | 0.598248 | 7.3:+29528395 | MS.gene42239:CDS |
| TGTTGGCGTGGCTGGTGTCG+AGG | 0.598664 | 7.3:+29529231 | MS.gene42239:CDS |
| CTTCAGTTTGAATGAGACAA+CGG | 0.599538 | 7.3:-29532503 | None:intergenic |
| ATTTATTAGAGTATTGGTCA+AGG | 0.601001 | 7.3:-29529293 | None:intergenic |
| TATTGATGGGACGATACTCA+GGG | 0.612770 | 7.3:-29531134 | None:intergenic |
| TGGAAAATCTTTCACTCACG+AGG | 0.612945 | 7.3:-29529709 | None:intergenic |
| CGAAAATTCTACGTAGCTTG+CGG | 0.614489 | 7.3:+29528320 | MS.gene42239:CDS |
| GCTGGGTAGAACCATCGCTC+CGG | 0.622517 | 7.3:+29531109 | MS.gene42239:CDS |
| TGAGAGCTTTGAGAGTGGCA+TGG | 0.631919 | 7.3:-29528385 | None:intergenic |
| ATCATTGTTTGGAAGCACAA+AGG | 0.633022 | 7.3:+29530348 | MS.gene42239:CDS |
| TATCACTTACATTAGGCTGA+GGG | 0.637069 | 7.3:-29531564 | None:intergenic |
| GGAGTTGAGAGCTTTGAGAG+TGG | 0.641571 | 7.3:-29528390 | None:intergenic |
| TGGTGTCGAGGAAGGTGATG+TGG | 0.664056 | 7.3:+29529243 | MS.gene42239:CDS |
| GGAAAATCTTTCACTCACGA+GGG | 0.671870 | 7.3:-29529708 | None:intergenic |
| AAATGAGCAACTTGTTGGCG+TGG | 0.677634 | 7.3:+29529219 | MS.gene42239:CDS |
| GGAGTGTTTGAAGATAACAT+AGG | 0.691852 | 7.3:-29528220 | None:intergenic |
| ATTGATGGGACGATACTCAG+GGG | 0.777275 | 7.3:-29531133 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAACAAATATATTGAT+GGG | - | chr7.3:29531150-29531169 | None:intergenic | 10.0% |
| !! | TAACTATTTAACTATAAAAA+AGG | + | chr7.3:29532347-29532366 | MS.gene42239:intron | 10.0% |
| !! | TAGTTAAATAGTTAAATAAA+TGG | - | chr7.3:29532341-29532360 | None:intergenic | 10.0% |
| !!! | AAATCACTTTAAAAAAAAAT+TGG | + | chr7.3:29531372-29531391 | MS.gene42239:intron | 10.0% |
| !!! | TTTTTCAAGATTTTTTTTAT+AGG | + | chr7.3:29532154-29532173 | MS.gene42239:intron | 10.0% |
| !! | AAAAAATATGTAGAGTAAAT+AGG | + | chr7.3:29533114-29533133 | MS.gene42239:intron | 15.0% |
| !! | AAAAATATGTAGAGTAAATA+GGG | + | chr7.3:29533115-29533134 | MS.gene42239:intron | 15.0% |
| !! | ATAATCTAGCAAAATTAATT+TGG | - | chr7.3:29530803-29530822 | None:intergenic | 15.0% |
| !! | GAAATTAACAAATATATTGA+TGG | - | chr7.3:29531151-29531170 | None:intergenic | 15.0% |
| !! | TAGAAAAAAAAGAAAAGAAA+GGG | - | chr7.3:29533012-29533031 | None:intergenic | 15.0% |
| !! | TAGAAATTTCAAAAATCATT+AGG | - | chr7.3:29529760-29529779 | None:intergenic | 15.0% |
| !! | TGCTAAAATAATGATAATTT+AGG | + | chr7.3:29530221-29530240 | MS.gene42239:intron | 15.0% |
| !!! | AGTTTGTTTTAGATTTATTA+TGG | - | chr7.3:29531884-29531903 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTATTTGCTTTT+TGG | + | chr7.3:29528492-29528511 | MS.gene42239:intron | 15.0% |
| !!! | CTATTTCTGTTAAATATTAT+TGG | + | chr7.3:29529601-29529620 | MS.gene42239:intron | 15.0% |
| !!! | CTTTTTTTTCTACAAAAATT+TGG | + | chr7.3:29533020-29533039 | MS.gene42239:intron | 15.0% |
| !! | AAAATATGTAGAGTAAATAG+GGG | + | chr7.3:29533116-29533135 | MS.gene42239:intron | 20.0% |
| !! | AAAATGCATTTGCTTAAATT+TGG | + | chr7.3:29529155-29529174 | MS.gene42239:intron | 20.0% |
| !! | AAATGCATTTGCTTAAATTT+GGG | + | chr7.3:29529156-29529175 | MS.gene42239:intron | 20.0% |
| !! | AATACTATATCACTTACATT+AGG | - | chr7.3:29531574-29531593 | None:intergenic | 20.0% |
| !! | ATGTACTTGAAAATATCAAA+AGG | + | chr7.3:29533161-29533180 | MS.gene42239:intron | 20.0% |
| !! | ATTATGAACACAATCATTTA+TGG | - | chr7.3:29530989-29531008 | None:intergenic | 20.0% |
| !! | CATTAATTATACAAGAAAAC+CGG | - | chr7.3:29530248-29530267 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAAATCAGATTT+AGG | - | chr7.3:29528904-29528923 | None:intergenic | 20.0% |
| !! | GGTACAATGATAAATTAATT+TGG | - | chr7.3:29532899-29532918 | None:intergenic | 20.0% |
| !! | GTAGAAAAAAAAGAAAAGAA+AGG | - | chr7.3:29533013-29533032 | None:intergenic | 20.0% |
| !! | TAAACAGATTAAATTATTGC+AGG | + | chr7.3:29531071-29531090 | MS.gene42239:intron | 20.0% |
| !! | TCATAATATTCAGATTCTAT+TGG | + | chr7.3:29531002-29531021 | MS.gene42239:intron | 20.0% |
| !! | TCCAAACAATAAAACATAAA+GGG | - | chr7.3:29528930-29528949 | None:intergenic | 20.0% |
| !! | TGTACTTGAAAATATCAAAA+GGG | + | chr7.3:29533162-29533181 | MS.gene42239:intron | 20.0% |
| !! | TGTGATTTCAATTATTAGAA+GGG | - | chr7.3:29532819-29532838 | None:intergenic | 20.0% |
| !! | TTAACTATAAAAAAGGAAGA+AGG | + | chr7.3:29532354-29532373 | MS.gene42239:intron | 20.0% |
| !! | TTCCAAACAATAAAACATAA+AGG | - | chr7.3:29528931-29528950 | None:intergenic | 20.0% |
| !! | TTGTGATTTCAATTATTAGA+AGG | - | chr7.3:29532820-29532839 | None:intergenic | 20.0% |
| !! | TTGTTTGGAAGTTATTTATA+TGG | + | chr7.3:29528941-29528960 | MS.gene42239:intron | 20.0% |
| !! | TTTGGCAAATGAAAAAATAA+TGG | - | chr7.3:29530442-29530461 | None:intergenic | 20.0% |
| !!! | AAAACCGTATTTTTTCTAAA+AGG | - | chr7.3:29532737-29532756 | None:intergenic | 20.0% |
| !!! | AAACCGTATTTTTTCTAAAA+GGG | - | chr7.3:29532736-29532755 | None:intergenic | 20.0% |
| !!! | AAATAATGATAATTTAGGAC+CGG | + | chr7.3:29530226-29530245 | MS.gene42239:intron | 20.0% |
| !!! | ATATTTGTTAATTTCTACTC+AGG | + | chr7.3:29531156-29531175 | MS.gene42239:CDS | 20.0% |
| !!! | GACAAGAATTTTTTCTAAAA+GGG | + | chr7.3:29533198-29533217 | MS.gene42239:intron | 20.0% |
| !!! | GATTTTTTTTCCTGATAATA+TGG | - | chr7.3:29529853-29529872 | None:intergenic | 20.0% |
| !!! | TATTGTTGTTTAGTAGTTTA+GGG | - | chr7.3:29530417-29530436 | None:intergenic | 20.0% |
| !!! | TGACTTATTTGTATCATTTT+TGG | + | chr7.3:29529573-29529592 | MS.gene42239:intron | 20.0% |
| !!! | TTGTTTTAGATTTATTATGG+TGG | - | chr7.3:29531881-29531900 | None:intergenic | 20.0% |
| ! | AAAAAAGAAAAGAAAGGGAA+AGG | - | chr7.3:29533007-29533026 | None:intergenic | 25.0% |
| ! | AAATGAAATTCAGTGAGTAA+GGG | - | chr7.3:29533508-29533527 | None:intergenic | 25.0% |
| ! | AATGCAATAAGAAGAATTTG+AGG | - | chr7.3:29530087-29530106 | None:intergenic | 25.0% |
| ! | AATTCACTTTCCATATTATC+AGG | + | chr7.3:29529840-29529859 | MS.gene42239:intron | 25.0% |
| ! | ACAACAAGTTACATATAATC+TGG | - | chr7.3:29530827-29530846 | None:intergenic | 25.0% |
| ! | ACCAATACTCTAATAAATTC+TGG | + | chr7.3:29529298-29529317 | MS.gene42239:CDS | 25.0% |
| ! | ACCAGAATTTATTAGAGTAT+TGG | - | chr7.3:29529302-29529321 | None:intergenic | 25.0% |
| ! | AGCATAAAATACACCAAATT+TGG | - | chr7.3:29531481-29531500 | None:intergenic | 25.0% |
| ! | ATACGTAAAAAGGACTTATA+TGG | + | chr7.3:29528813-29528832 | MS.gene42239:intron | 25.0% |
| ! | ATACTTGATTGTAAAAGGAT+AGG | - | chr7.3:29531227-29531246 | None:intergenic | 25.0% |
| ! | ATATAACACAAACAGAAAGT+AGG | + | chr7.3:29532111-29532130 | MS.gene42239:intron | 25.0% |
| ! | ATTCAGTTCTATATACTTGT+AGG | + | chr7.3:29533314-29533333 | MS.gene42239:intron | 25.0% |
| ! | CCAAACAATAAAACATAAAG+GGG | - | chr7.3:29528929-29528948 | None:intergenic | 25.0% |
| ! | GAAATAGCTTATACGTAAAA+AGG | + | chr7.3:29528803-29528822 | MS.gene42239:intron | 25.0% |
| ! | GAAGTTATTTATATGGACTT+TGG | + | chr7.3:29528948-29528967 | MS.gene42239:intron | 25.0% |
| ! | GTCAAAAAGAGATATATTCT+TGG | - | chr7.3:29529943-29529962 | None:intergenic | 25.0% |
| ! | TAAAACGAAAAAGTCAAAAC+CGG | - | chr7.3:29529075-29529094 | None:intergenic | 25.0% |
| ! | TAGTCTACATTCAATATACA+AGG | - | chr7.3:29532948-29532967 | None:intergenic | 25.0% |
| ! | TATATTGAATGTAGACTAGT+TGG | + | chr7.3:29532950-29532969 | MS.gene42239:intron | 25.0% |
| ! | TCCAAACAATGATGATATAT+GGG | - | chr7.3:29530341-29530360 | None:intergenic | 25.0% |
| ! | TTAACAATGAATGCAAGATA+GGG | - | chr7.3:29529996-29530015 | None:intergenic | 25.0% |
| ! | TTCCAAACAATGATGATATA+TGG | - | chr7.3:29530342-29530361 | None:intergenic | 25.0% |
| ! | TTGAAAAATAGTTGCTTCAT+GGG | - | chr7.3:29532142-29532161 | None:intergenic | 25.0% |
| ! | TTGTGATACTTGATTGTAAA+AGG | - | chr7.3:29531232-29531251 | None:intergenic | 25.0% |
| ! | TTTACTTTCATTACCAGTAA+CGG | - | chr7.3:29532313-29532332 | None:intergenic | 25.0% |
| ! | TTTCAAAAGCTAAAACAAAC+AGG | - | chr7.3:29531913-29531932 | None:intergenic | 25.0% |
| ! | TTTCCAAATTTGTGATAAGT+TGG | + | chr7.3:29529646-29529665 | MS.gene42239:intron | 25.0% |
| !! | AAAATATTGCCACTTAGTTT+AGG | - | chr7.3:29530752-29530771 | None:intergenic | 25.0% |
| !! | AAGTATCACAAGTTTTCATA+TGG | + | chr7.3:29531241-29531260 | MS.gene42239:intron | 25.0% |
| !! | AATCTTTTCAATAACTTGAC+TGG | - | chr7.3:29531290-29531309 | None:intergenic | 25.0% |
| !! | ATCAAAAGGGTCTTATAATA+AGG | + | chr7.3:29533175-29533194 | MS.gene42239:intron | 25.0% |
| !! | ATTCATTTTCATGTTTGTCT+AGG | + | chr7.3:29532471-29532490 | MS.gene42239:intron | 25.0% |
| !! | ATTGCATTCAAAAGATCTTT+TGG | + | chr7.3:29530099-29530118 | MS.gene42239:intron | 25.0% |
| !! | CTAAAAGGGTCTTATAATAA+GGG | - | chr7.3:29532722-29532741 | None:intergenic | 25.0% |
| !! | GAATAAAAGCTTCTTTTCAA+TGG | + | chr7.3:29532555-29532574 | MS.gene42239:CDS | 25.0% |
| !! | GTTATGATTTTTCATTGCAT+AGG | + | chr7.3:29529670-29529689 | MS.gene42239:intron | 25.0% |
| !! | TAAGGGCATAAAATGAAAAT+AGG | - | chr7.3:29533491-29533510 | None:intergenic | 25.0% |
| !! | TACATATCAGTAGATTTTGT+GGG | + | chr7.3:29532428-29532447 | MS.gene42239:intron | 25.0% |
| !! | TCAAAAGGGTCTTATAATAA+GGG | + | chr7.3:29533176-29533195 | MS.gene42239:intron | 25.0% |
| !! | TCACGTTAATTTTCAGTAAT+GGG | - | chr7.3:29532920-29532939 | None:intergenic | 25.0% |
| !! | TCTAAAAGGGTCTTATAATA+AGG | - | chr7.3:29532723-29532742 | None:intergenic | 25.0% |
| !! | TTACATATCAGTAGATTTTG+TGG | + | chr7.3:29532427-29532446 | MS.gene42239:intron | 25.0% |
| !! | TTCACGTTAATTTTCAGTAA+TGG | - | chr7.3:29532921-29532940 | None:intergenic | 25.0% |
| !! | TTCTAAGTACTGTAAGTTAT+CGG | + | chr7.3:29533436-29533455 | MS.gene42239:intron | 25.0% |
| !!! | AGACCCTTTTAGAAAAAATA+CGG | + | chr7.3:29532730-29532749 | MS.gene42239:intron | 25.0% |
| !!! | ATATTTTAACCATGACGTTT+TGG | + | chr7.3:29530765-29530784 | MS.gene42239:intron | 25.0% |
| !!! | ATTTATTAGAGTATTGGTCA+AGG | - | chr7.3:29529296-29529315 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTGTCTGTCTACA+TGG | + | chr7.3:29529513-29529532 | MS.gene42239:intron | 25.0% |
| !!! | CTTATTTTCATAAGTTCTCT+AGG | + | chr7.3:29528700-29528719 | MS.gene42239:intron | 25.0% |
| !!! | CTTTTAACTTATATGAGAAC+TGG | + | chr7.3:29528747-29528766 | MS.gene42239:intron | 25.0% |
| !!! | GACTTTTTCGTTTTATTGTT+TGG | + | chr7.3:29529080-29529099 | MS.gene42239:intron | 25.0% |
| !!! | GGACAAGAATTTTTTCTAAA+AGG | + | chr7.3:29533197-29533216 | MS.gene42239:intron | 25.0% |
| !!! | GTATTGTTGTTTAGTAGTTT+AGG | - | chr7.3:29530418-29530437 | None:intergenic | 25.0% |
| !!! | TAGTAGTGGGTAATTAATAT+AGG | - | chr7.3:29532854-29532873 | None:intergenic | 25.0% |
| !!! | TTACAGTTTGTTTTAGATTC+TGG | - | chr7.3:29532026-29532045 | None:intergenic | 25.0% |
| !!! | TTGCTTTTTGGTGTATTTTT+TGG | + | chr7.3:29528504-29528523 | MS.gene42239:intron | 25.0% |
| AAACAAACTGTAAAGTGAAG+TGG | + | chr7.3:29532033-29532052 | MS.gene42239:intron | 30.0% | |
| AAGAACAGCAATAAGTTTAG+TGG | - | chr7.3:29533061-29533080 | None:intergenic | 30.0% | |
| AATGCAGGAGATATAGTTAT+TGG | + | chr7.3:29532397-29532416 | MS.gene42239:intron | 30.0% | |
| AATTATTAGAAGGGCAAACA+TGG | - | chr7.3:29532810-29532829 | None:intergenic | 30.0% | |
| ACAGATTAAATTATTGCAGG+AGG | + | chr7.3:29531074-29531093 | MS.gene42239:intron | 30.0% | |
| ACTCCAACTTATCACAAATT+TGG | - | chr7.3:29529652-29529671 | None:intergenic | 30.0% | |
| AGAACAGCAATAAGTTTAGT+GGG | - | chr7.3:29533060-29533079 | None:intergenic | 30.0% | |
| AGATCCTGAGTACAAATTTA+AGG | + | chr7.3:29531522-29531541 | MS.gene42239:intron | 30.0% | |
| AGATTCTGGTGAAAACAAAA+TGG | - | chr7.3:29532012-29532031 | None:intergenic | 30.0% | |
| AGCCAAAATTTAAAGAGCTA+TGG | - | chr7.3:29530142-29530161 | None:intergenic | 30.0% | |
| ATCAAATTACTACTCCCAAT+GGG | + | chr7.3:29530914-29530933 | MS.gene42239:CDS | 30.0% | |
| ATTATCCTAAAAGAATCGCA+GGG | - | chr7.3:29531696-29531715 | None:intergenic | 30.0% | |
| ATTCTGGTGAAAACAAAATG+GGG | - | chr7.3:29532010-29532029 | None:intergenic | 30.0% | |
| CAAATGAAATTCAGTGAGTA+AGG | - | chr7.3:29533509-29533528 | None:intergenic | 30.0% | |
| CAAGTTATTCAAGTAGTAGT+GGG | - | chr7.3:29532867-29532886 | None:intergenic | 30.0% | |
| CAGTAATTAATGCACACAAT+CGG | - | chr7.3:29532673-29532692 | None:intergenic | 30.0% | |
| CTGTTATTACATTAAGACCA+TGG | - | chr7.3:29531043-29531062 | None:intergenic | 30.0% | |
| CTTAACAATGAATGCAAGAT+AGG | - | chr7.3:29529997-29530016 | None:intergenic | 30.0% | |
| CTTATCAACAAAAACACTAC+AGG | - | chr7.3:29529790-29529809 | None:intergenic | 30.0% | |
| CTTGAAAAATAGTTGCTTCA+TGG | - | chr7.3:29532143-29532162 | None:intergenic | 30.0% | |
| CTTGTCACTCTTACAAAATA+TGG | + | chr7.3:29530522-29530541 | MS.gene42239:intron | 30.0% | |
| GATAATCCAATATATGCAAG+AGG | + | chr7.3:29531710-29531729 | MS.gene42239:intron | 30.0% | |
| GATTCTGGTGAAAACAAAAT+GGG | - | chr7.3:29532011-29532030 | None:intergenic | 30.0% | |
| TAAAGCTTCTTCTATCTCAA+GGG | - | chr7.3:29533403-29533422 | None:intergenic | 30.0% | |
| TAAGACCATGGACATTAAAA+AGG | - | chr7.3:29531031-29531050 | None:intergenic | 30.0% | |
| TATAGGCAAATGTTAGTTGT+TGG | + | chr7.3:29532171-29532190 | MS.gene42239:intron | 30.0% | |
| TCAAGTTATTCAAGTAGTAG+TGG | - | chr7.3:29532868-29532887 | None:intergenic | 30.0% | |
| TCCCATATATCATCATTGTT+TGG | + | chr7.3:29530337-29530356 | MS.gene42239:CDS | 30.0% | |
| TGGTTCAAACTATCAATAAC+TGG | - | chr7.3:29529923-29529942 | None:intergenic | 30.0% | |
| TGTGTTATATCTCACATATG+CGG | - | chr7.3:29532101-29532120 | None:intergenic | 30.0% | |
| ! | AAAAAGTCAAAACCGGATTT+TGG | - | chr7.3:29529068-29529087 | None:intergenic | 30.0% |
| ! | ACATCTGTACTGATATAGAA+AGG | - | chr7.3:29530893-29530912 | None:intergenic | 30.0% |
| ! | AGTAAAAAAGTGCATGTACT+GGG | + | chr7.3:29531974-29531993 | MS.gene42239:intron | 30.0% |
| ! | CAGTTTTACAAAATCATCCA+AGG | - | chr7.3:29533610-29533629 | None:intergenic | 30.0% |
| ! | CTCCATAGCTCTTTAAATTT+TGG | + | chr7.3:29530137-29530156 | MS.gene42239:intron | 30.0% |
| ! | GCTGTCAAATGACTTTATTT+AGG | - | chr7.3:29530715-29530734 | None:intergenic | 30.0% |
| ! | TAGCAAAATTAATTTGGCAG+AGG | - | chr7.3:29530797-29530816 | None:intergenic | 30.0% |
| ! | TATCTTTGTTTAGAGTAGCT+TGG | - | chr7.3:29533267-29533286 | None:intergenic | 30.0% |
| ! | TATTTTGTAAGAGTGACAAG+TGG | - | chr7.3:29530522-29530541 | None:intergenic | 30.0% |
| ! | TTGAAGTGTTACAACACAAT+GGG | - | chr7.3:29528468-29528487 | None:intergenic | 30.0% |
| ! | TTTGAAGTGTTACAACACAA+TGG | - | chr7.3:29528469-29528488 | None:intergenic | 30.0% |
| !! | AGCCAACACTTTCTAAAATT+TGG | - | chr7.3:29530460-29530479 | None:intergenic | 30.0% |
| !! | CCCCTTTATGTTTTATTGTT+TGG | + | chr7.3:29528926-29528945 | MS.gene42239:intron | 30.0% |
| !! | TGCCAAATTTTAGAAAGTGT+TGG | + | chr7.3:29530455-29530474 | MS.gene42239:intron | 30.0% |
| !!! | ATTTTGGCTCATTATATTGC+TGG | + | chr7.3:29530153-29530172 | MS.gene42239:intron | 30.0% |
| !!! | TACATGCACTTTTTTACTGA+GGG | - | chr7.3:29531972-29531991 | None:intergenic | 30.0% |
| AAAAAAGTGAAAGCCGTTAC+TGG | + | chr7.3:29532297-29532316 | MS.gene42239:intron | 35.0% | |
| AAATTCTGGTGCATTTGTTC+TGG | + | chr7.3:29529312-29529331 | MS.gene42239:CDS | 35.0% | |
| AATATTATTGGTCGCAGTGT+AGG | + | chr7.3:29529613-29529632 | MS.gene42239:intron | 35.0% | |
| AGAGCTATGGAGAAATTACA+AGG | - | chr7.3:29530129-29530148 | None:intergenic | 35.0% | |
| ATAACTTACTAAGAAGCCAC+AGG | - | chr7.3:29531413-29531432 | None:intergenic | 35.0% | |
| ATATCACTTACATTAGGCTG+AGG | - | chr7.3:29531568-29531587 | None:intergenic | 35.0% | |
| ATGGTGAATCAATTCTAACC+TGG | - | chr7.3:29530970-29530989 | None:intergenic | 35.0% | |
| ATTGCTTCAGGACTTCATTT+GGG | + | chr7.3:29529120-29529139 | MS.gene42239:intron | 35.0% | |
| ATTGTTAAGAGTCAGAAGTC+AGG | + | chr7.3:29530008-29530027 | MS.gene42239:intron | 35.0% | |
| CATTGCATAGGATAAACACA+TGG | + | chr7.3:29529682-29529701 | MS.gene42239:intron | 35.0% | |
| CGATTGTGTGCATTAATTAC+TGG | + | chr7.3:29532671-29532690 | MS.gene42239:intron | 35.0% | |
| CTAAAAGGGTCCTATAACAA+GGG | + | chr7.3:29533212-29533231 | MS.gene42239:intron | 35.0% | |
| CTAAAGCTTCTTCTATCTCA+AGG | - | chr7.3:29533404-29533423 | None:intergenic | 35.0% | |
| CTATGCATGACAATGTATGA+CGG | - | chr7.3:29532595-29532614 | None:intergenic | 35.0% | |
| CTTCAGTTTGAATGAGACAA+CGG | - | chr7.3:29532506-29532525 | None:intergenic | 35.0% | |
| GACATAAATGAGCAACTTGT+TGG | + | chr7.3:29529214-29529233 | MS.gene42239:CDS | 35.0% | |
| GACTATATAATCCTTTCCTG+TGG | + | chr7.3:29531394-29531413 | MS.gene42239:intron | 35.0% | |
| GATATGCGCTTGAATGATAT+TGG | + | chr7.3:29531594-29531613 | MS.gene42239:intron | 35.0% | |
| GATATTCGTTACGCCAAATT+TGG | + | chr7.3:29531465-29531484 | MS.gene42239:intron | 35.0% | |
| GATCAAATTACTACTCCCAA+TGG | + | chr7.3:29530913-29530932 | MS.gene42239:CDS | 35.0% | |
| GATTATCCTAAAAGAATCGC+AGG | - | chr7.3:29531697-29531716 | None:intergenic | 35.0% | |
| GGAACTATGGTGAATGTAAT+GGG | + | chr7.3:29530577-29530596 | MS.gene42239:intron | 35.0% | |
| GTTGTACATGTTTGCATCTT+TGG | + | chr7.3:29529545-29529564 | MS.gene42239:intron | 35.0% | |
| TAGGTTTATGCTGTTGAGTA+TGG | - | chr7.3:29530696-29530715 | None:intergenic | 35.0% | |
| TATCACTTACATTAGGCTGA+GGG | - | chr7.3:29531567-29531586 | None:intergenic | 35.0% | |
| TCAAGAAAGCGAAAAACTTG+TGG | + | chr7.3:29531830-29531849 | MS.gene42239:intron | 35.0% | |
| TCTAAAAGGGTCCTATAACA+AGG | + | chr7.3:29533211-29533230 | MS.gene42239:intron | 35.0% | |
| TCTATGCCTCTTGCATATAT+TGG | - | chr7.3:29531719-29531738 | None:intergenic | 35.0% | |
| TCTTGAAACGAAGTTTCAGA+TGG | - | chr7.3:29531816-29531835 | None:intergenic | 35.0% | |
| TGCAAACAACATACCATTTC+AGG | - | chr7.3:29530854-29530873 | None:intergenic | 35.0% | |
| TTCAAGTGTCCTAAACTAAG+TGG | + | chr7.3:29530740-29530759 | MS.gene42239:intron | 35.0% | |
| ! | AAGGGTCTTATAATAAGGGA+CGG | - | chr7.3:29533199-29533180 | None:intergenic | 35.0% |
| ! | AGCTTTTATTCGACGAAACT+TGG | - | chr7.3:29532546-29532565 | None:intergenic | 35.0% |
| ! | AGTGAAAGATTTTCCAGTAC+AGG | + | chr7.3:29529716-29529735 | MS.gene42239:CDS | 35.0% |
| ! | ATCATTGTTTGGAAGCACAA+AGG | + | chr7.3:29530348-29530367 | MS.gene42239:CDS | 35.0% |
| ! | CAGTAAAAAAGTGCATGTAC+TGG | + | chr7.3:29531973-29531992 | MS.gene42239:intron | 35.0% |
| ! | CCTGCAAGCATTTTATCAAA+AGG | - | chr7.3:29530282-29530301 | None:intergenic | 35.0% |
| ! | CCTTTTGATAAAATGCTTGC+AGG | + | chr7.3:29530279-29530298 | MS.gene42239:intron | 35.0% |
| ! | CTATATCTCCTGCATTTTTC+AGG | - | chr7.3:29532393-29532412 | None:intergenic | 35.0% |
| ! | CTTTTATTCGACGAAACTTG+GGG | - | chr7.3:29532544-29532563 | None:intergenic | 35.0% |
| ! | GCTTTTATTCGACGAAACTT+GGG | - | chr7.3:29532545-29532564 | None:intergenic | 35.0% |
| ! | GGAGTGTTTGAAGATAACAT+AGG | - | chr7.3:29528223-29528242 | None:intergenic | 35.0% |
| ! | GTTTTGTACTTAGGACTGTT+TGG | + | chr7.3:29528571-29528590 | MS.gene42239:intron | 35.0% |
| ! | TCTGTTGCGACATGAATTTT+GGG | + | chr7.3:29529032-29529051 | MS.gene42239:intron | 35.0% |
| ! | TGAAATGGTATGTTGTTTGC+AGG | + | chr7.3:29530853-29530872 | MS.gene42239:intron | 35.0% |
| ! | TTGTTTGGAGATGATTTTGC+TGG | + | chr7.3:29529095-29529114 | MS.gene42239:intron | 35.0% |
| ! | TTTGGTGGGCATAAATGAAT+CGG | + | chr7.3:29530637-29530656 | MS.gene42239:intron | 35.0% |
| !! | AAGTGTTGGCTACTTGATAA+AGG | + | chr7.3:29530469-29530488 | MS.gene42239:intron | 35.0% |
| !! | ACTTGTTGTCAATCCTGAAA+TGG | + | chr7.3:29530838-29530857 | MS.gene42239:intron | 35.0% |
| !! | ATGGTGAATGTAATGGGTAT+TGG | + | chr7.3:29530583-29530602 | MS.gene42239:intron | 35.0% |
| !! | GAAGAAGCTTTAGAAAGCAT+AGG | + | chr7.3:29533411-29533430 | MS.gene42239:CDS | 35.0% |
| !! | TGGTGAATGTAATGGGTATT+GGG | + | chr7.3:29530584-29530603 | MS.gene42239:intron | 35.0% |
| !!! | ACCTGACCAAGAGATTTTTT+GGG | - | chr7.3:29528428-29528447 | None:intergenic | 35.0% |
| !!! | CATGTTTGCAAGTGCTTTTT+TGG | + | chr7.3:29529469-29529488 | MS.gene42239:intron | 35.0% |
| !!! | GTACATGCACTTTTTTACTG+AGG | - | chr7.3:29531973-29531992 | None:intergenic | 35.0% |
| !!! | TATTTTTTGGTTGCTCTGTG+AGG | + | chr7.3:29528517-29528536 | MS.gene42239:intron | 35.0% |
| AACTGCATTTACTACTGTGC+AGG | + | chr7.3:29530031-29530050 | MS.gene42239:intron | 40.0% | |
| AAGGTTGCGTTGTGAGATAT+TGG | - | chr7.3:29528248-29528267 | None:intergenic | 40.0% | |
| ACAAGTGGAGCTGAATGTTA+GGG | - | chr7.3:29530507-29530526 | None:intergenic | 40.0% | |
| AGATCCCCCAAAAAATCTCT+TGG | + | chr7.3:29528419-29528438 | MS.gene42239:CDS | 40.0% | |
| AGCGAAAAACTTGTGGCTTT+CGG | + | chr7.3:29531837-29531856 | MS.gene42239:intron | 40.0% | |
| AGGATCTGTAAAAGAGAGTC+AGG | - | chr7.3:29531509-29531528 | None:intergenic | 40.0% | |
| AGTAGACATGGTTTGAACTC+TGG | + | chr7.3:29532205-29532224 | MS.gene42239:intron | 40.0% | |
| ATATTGATGGGACGATACTC+AGG | - | chr7.3:29531138-29531157 | None:intergenic | 40.0% | |
| ATTTGTTCTGGCGGTTGAAA+AGG | + | chr7.3:29529324-29529343 | MS.gene42239:CDS | 40.0% | |
| CATTGCTTCAGGACTTCATT+TGG | + | chr7.3:29529119-29529138 | MS.gene42239:intron | 40.0% | |
| CATTTATGCCCACCAAACAA+AGG | - | chr7.3:29530634-29530653 | None:intergenic | 40.0% | |
| CGAAAATTCTACGTAGCTTG+CGG | + | chr7.3:29528320-29528339 | MS.gene42239:CDS | 40.0% | |
| CTATACACGCAAAGTGGAAA+CGG | - | chr7.3:29530552-29530571 | None:intergenic | 40.0% | |
| CTGAGAAAATGTCACCCATT+GGG | - | chr7.3:29530931-29530950 | None:intergenic | 40.0% | |
| GAAACTTGGGGATATTCTGA+TGG | - | chr7.3:29532532-29532551 | None:intergenic | 40.0% | |
| GACCATGGACATTAAAAAGG+AGG | - | chr7.3:29531028-29531047 | None:intergenic | 40.0% | |
| GCATGGTAATCGTCTTTGTT+TGG | - | chr7.3:29528371-29528390 | None:intergenic | 40.0% | |
| GCGACCTTAAATTTGTACTC+AGG | - | chr7.3:29531529-29531548 | None:intergenic | 40.0% | |
| GCTTTCAATGACTCGTTCTT+TGG | + | chr7.3:29529408-29529427 | MS.gene42239:intron | 40.0% | |
| GGAAAATCTTTCACTCACGA+GGG | - | chr7.3:29529711-29529730 | None:intergenic | 40.0% | |
| GGCTCATGAAAAACTTGCAT+TGG | + | chr7.3:29532054-29532073 | MS.gene42239:intron | 40.0% | |
| GGGAACTATGGTGAATGTAA+TGG | + | chr7.3:29530576-29530595 | MS.gene42239:intron | 40.0% | |
| GGGTTTAGCATTCCAAAATC+CGG | + | chr7.3:29529053-29529072 | MS.gene42239:intron | 40.0% | |
| GTGATGGCAATCATGATTCA+AGG | + | chr7.3:29531334-29531353 | MS.gene42239:intron | 40.0% | |
| GTGTGTTATGTCAGTAGACA+TGG | + | chr7.3:29532193-29532212 | MS.gene42239:intron | 40.0% | |
| TAACTGTGCGTAATCTGTGA+TGG | + | chr7.3:29531318-29531337 | MS.gene42239:intron | 40.0% | |
| TACCTTCAACTTTCCTGTAC+TGG | - | chr7.3:29529732-29529751 | None:intergenic | 40.0% | |
| TATATCTCACATATGCGGCA+CGG | - | chr7.3:29532096-29532115 | None:intergenic | 40.0% | |
| TATTGATGGGACGATACTCA+GGG | - | chr7.3:29531137-29531156 | None:intergenic | 40.0% | |
| TCTGAGAAAATGTCACCCAT+TGG | - | chr7.3:29530932-29530951 | None:intergenic | 40.0% | |
| TCTTCTGATGTTTGCAGTCA+AGG | + | chr7.3:29533571-29533590 | MS.gene42239:intron | 40.0% | |
| TGGAAAATCTTTCACTCACG+AGG | - | chr7.3:29529712-29529731 | None:intergenic | 40.0% | |
| TGGCTCATTATATTGCTGGA+TGG | + | chr7.3:29530157-29530176 | MS.gene42239:intron | 40.0% | |
| TGTCATGCATAGAGTTTCTG+AGG | + | chr7.3:29532603-29532622 | MS.gene42239:intron | 40.0% | |
| TTACTAAGAAGCCACAGGAA+AGG | - | chr7.3:29531408-29531427 | None:intergenic | 40.0% | |
| TTCCAGTACAGGAAAGTTGA+AGG | + | chr7.3:29529727-29529746 | MS.gene42239:CDS | 40.0% | |
| TTGACATGCACTGTATGCTT+AGG | + | chr7.3:29529958-29529977 | MS.gene42239:intron | 40.0% | |
| TTGCTTCAGGACTTCATTTG+GGG | + | chr7.3:29529121-29529140 | MS.gene42239:intron | 40.0% | |
| TTTGGTTGCATACTTCGTTG+AGG | + | chr7.3:29528966-29528985 | MS.gene42239:intron | 40.0% | |
| ! | AACGAGTCATTGAAAGCATG+AGG | - | chr7.3:29529405-29529424 | None:intergenic | 40.0% |
| ! | AATGGTATGTTGTTTGCAGG+TGG | + | chr7.3:29530856-29530875 | MS.gene42239:intron | 40.0% |
| ! | ACGAGTCATTGAAAGCATGA+GGG | - | chr7.3:29529404-29529423 | None:intergenic | 40.0% |
| ! | AGTTTGGACCTTTGTTTGGT+GGG | + | chr7.3:29530623-29530642 | MS.gene42239:intron | 40.0% |
| ! | ATTTTGCTGGACATTGCTTC+AGG | + | chr7.3:29529108-29529127 | MS.gene42239:intron | 40.0% |
| ! | CGTTTTATCGAACATGTGGT+GGG | + | chr7.3:29528540-29528559 | MS.gene42239:intron | 40.0% |
| ! | CTACGTAGAATTTTCGACTC+CGG | - | chr7.3:29528316-29528335 | None:intergenic | 40.0% |
| ! | CTCTGTTGCGACATGAATTT+TGG | + | chr7.3:29529031-29529050 | MS.gene42239:intron | 40.0% |
| ! | CTGTTGCGACATGAATTTTG+GGG | + | chr7.3:29529033-29529052 | MS.gene42239:intron | 40.0% |
| ! | GACAATGTATGACGGAGAAA+GGG | - | chr7.3:29532587-29532606 | None:intergenic | 40.0% |
| ! | TAGTTTGGACCTTTGTTTGG+TGG | + | chr7.3:29530622-29530641 | MS.gene42239:intron | 40.0% |
| ! | TCAACTGCTGTTGGTTAGTT+TGG | + | chr7.3:29530607-29530626 | MS.gene42239:intron | 40.0% |
| ! | TCATCCAAGGTTAGTTCTTC+AGG | - | chr7.3:29533597-29533616 | None:intergenic | 40.0% |
| ! | TGACAATGTATGACGGAGAA+AGG | - | chr7.3:29532588-29532607 | None:intergenic | 40.0% |
| ! | TGTTGGCTACTTGATAAAGG+AGG | + | chr7.3:29530472-29530491 | MS.gene42239:intron | 40.0% |
| !! | AATGACTATGCTGACTCATG+TGG | + | chr7.3:29533548-29533567 | MS.gene42239:intron | 40.0% |
| !! | ACTGGCTTGTGGGTTATTAT+TGG | - | chr7.3:29530671-29530690 | None:intergenic | 40.0% |
| !! | GGTTAGTTTGGACCTTTGTT+TGG | + | chr7.3:29530619-29530638 | MS.gene42239:intron | 40.0% |
| !!! | ATGCTTGCAGGTTTTGAATG+AGG | + | chr7.3:29530291-29530310 | MS.gene42239:intron | 40.0% |
| !!! | CACCTGACCAAGAGATTTTT+TGG | - | chr7.3:29528429-29528448 | None:intergenic | 40.0% |
| !!! | CCTGACCAAGAGATTTTTTG+GGG | - | chr7.3:29528427-29528446 | None:intergenic | 40.0% |
| !!! | CTGACCAAGAGATTTTTTGG+GGG | - | chr7.3:29528426-29528445 | None:intergenic | 40.0% |
| !!! | GCGTGTGTTGTTTTGTACTT+AGG | + | chr7.3:29528562-29528581 | MS.gene42239:intron | 40.0% |
| AAGGAAGAAGGAATGTCAGC+AGG | + | chr7.3:29532366-29532385 | MS.gene42239:intron | 45.0% | |
| AAGGCCTGAAGAACTAACCT+TGG | + | chr7.3:29533590-29533609 | MS.gene42239:CDS | 45.0% | |
| AAGGGTCCTATAACAAGGGA+CGG | + | chr7.3:29533216-29533235 | MS.gene42239:intron | 45.0% | |
| AATCTCTTGGTCAGGTGAGA+AGG | + | chr7.3:29528432-29528451 | MS.gene42239:intron | 45.0% | |
| ATGCTGTTGAGTATGGTCAC+TGG | - | chr7.3:29530689-29530708 | None:intergenic | 45.0% | |
| ATTGATGGGACGATACTCAG+GGG | - | chr7.3:29531136-29531155 | None:intergenic | 45.0% | |
| CAAGTGGAGCTGAATGTTAG+GGG | - | chr7.3:29530506-29530525 | None:intergenic | 45.0% | |
| CAAGTTACGTCTCGAGAGTA+AGG | + | chr7.3:29529813-29529832 | MS.gene42239:intron | 45.0% | |
| CACTTTGCGTGTATAGCAGA+GGG | + | chr7.3:29530556-29530575 | MS.gene42239:intron | 45.0% | |
| CCCCAAAAAATCTCTTGGTC+AGG | + | chr7.3:29528424-29528443 | MS.gene42239:CDS | 45.0% | |
| CTCAAAGCTCTCAACTCCAA+AGG | + | chr7.3:29528395-29528414 | MS.gene42239:CDS | 45.0% | |
| GACAAGTGGAGCTGAATGTT+AGG | - | chr7.3:29530508-29530527 | None:intergenic | 45.0% | |
| GTAGCTCGAGTGGTTTAACT+GGG | - | chr7.3:29532257-29532276 | None:intergenic | 45.0% | |
| GTGTATAGCAGAGGGAACTA+TGG | + | chr7.3:29530564-29530583 | MS.gene42239:intron | 45.0% | |
| GTTGCGTTGTGAGATATTGG+CGG | - | chr7.3:29528245-29528264 | None:intergenic | 45.0% | |
| TGCTTCAGGACTTCATTTGG+GGG | + | chr7.3:29529122-29529141 | MS.gene42239:intron | 45.0% | |
| TTCTGGTGCATTTGTTCTGG+CGG | + | chr7.3:29529315-29529334 | MS.gene42239:CDS | 45.0% | |
| TTGCGTTGTGAGATATTGGC+GGG | - | chr7.3:29528244-29528263 | None:intergenic | 45.0% | |
| ! | ACAGTTTTGCTAGCTGAGGT+GGG | + | chr7.3:29529884-29529903 | MS.gene42239:intron | 45.0% |
| ! | AGGCATTTTTATCGAGCGCA+GGG | + | chr7.3:29528986-29529005 | MS.gene42239:intron | 45.0% |
| ! | ATGTATGACGGAGAAAGGGA+AGG | - | chr7.3:29532583-29532602 | None:intergenic | 45.0% |
| ! | GCGTTTTATCGAACATGTGG+TGG | + | chr7.3:29528539-29528558 | MS.gene42239:intron | 45.0% |
| ! | GGAGTGCTACAGTACAAGTT+TGG | - | chr7.3:29528883-29528902 | None:intergenic | 45.0% |
| ! | GGCCTCCTTTTTAATGTCCA+TGG | + | chr7.3:29531023-29531042 | MS.gene42239:intron | 45.0% |
| ! | GGGTGACATTTTCTCAGAAG+TGG | + | chr7.3:29530934-29530953 | MS.gene42239:CDS | 45.0% |
| ! | GGTCTTATAATAAGGGACGG+AGG | - | chr7.3:29532715-29532734 | None:intergenic | 45.0% |
| ! | GTGATGTGGTGCTGGAAATT+GGG | + | chr7.3:29529257-29529276 | MS.gene42239:CDS | 45.0% |
| ! | TACAGTTTTGCTAGCTGAGG+TGG | + | chr7.3:29529883-29529902 | MS.gene42239:intron | 45.0% |
| ! | TGCTACAGTTTTGCTAGCTG+AGG | + | chr7.3:29529880-29529899 | MS.gene42239:intron | 45.0% |
| !! | AAATGAGCAACTTGTTGGCG+TGG | + | chr7.3:29529219-29529238 | MS.gene42239:CDS | 45.0% |
| !! | AGGAAAGCACCAAAACGTCA+TGG | - | chr7.3:29530777-29530796 | None:intergenic | 45.0% |
| !! | GAGGCGTTTTATCGAACATG+TGG | + | chr7.3:29528536-29528555 | MS.gene42239:intron | 45.0% |
| !! | TCGAAGCTCTGTTGTTTCCA+CGG | - | chr7.3:29528346-29528365 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGTTTGTTGGTGG+GGG | + | chr7.3:29529005-29529024 | MS.gene42239:intron | 45.0% |
| !!! | CAGGGTTTTGTTTGTTGGTG+GGG | + | chr7.3:29529004-29529023 | MS.gene42239:intron | 45.0% |
| !!! | GCAGGGTTTTGTTTGTTGGT+GGG | + | chr7.3:29529003-29529022 | MS.gene42239:intron | 45.0% |
| !!! | TTTTTTGGGGGATCTGCCTT+TGG | - | chr7.3:29528414-29528433 | None:intergenic | 45.0% |
| AAACCACTCGAGCTACGCTT+CGG | + | chr7.3:29532261-29532280 | MS.gene42239:intron | 50.0% | |
| AAGAGTCAGACACGTGACAC+AGG | - | chr7.3:29530200-29530219 | None:intergenic | 50.0% | |
| AGAAGTGGTTCTCTTGCTCC+AGG | + | chr7.3:29530949-29530968 | MS.gene42239:CDS | 50.0% | |
| CAGCAGGTCCTGAAAAATGC+AGG | + | chr7.3:29532382-29532401 | MS.gene42239:intron | 50.0% | |
| CCACTTTGCGTGTATAGCAG+AGG | + | chr7.3:29530555-29530574 | MS.gene42239:intron | 50.0% | |
| CCTCTGCTATACACGCAAAG+TGG | - | chr7.3:29530558-29530577 | None:intergenic | 50.0% | |
| CGTAGCTCGAGTGGTTTAAC+TGG | - | chr7.3:29532258-29532277 | None:intergenic | 50.0% | |
| TTGGTCAAGGAACCAGTTCC+TGG | - | chr7.3:29529283-29529302 | None:intergenic | 50.0% | |
| ! | CTACCTCCGTCCCTTGTTAT+AGG | - | chr7.3:29533225-29533244 | None:intergenic | 50.0% |
| ! | GCTCTCCCTGCGATTCTTTT+AGG | + | chr7.3:29531688-29531707 | MS.gene42239:intron | 50.0% |
| ! | GGTATTGGGTCAACTGCTGT+TGG | + | chr7.3:29530598-29530617 | MS.gene42239:intron | 50.0% |
| ! | GGTGATGTGGTGCTGGAAAT+TGG | + | chr7.3:29529256-29529275 | MS.gene42239:CDS | 50.0% |
| !! | GAGGCATTTTTATCGAGCGC+AGG | + | chr7.3:29528985-29529004 | MS.gene42239:intron | 50.0% |
| !! | GAGTATGGTCACTGGCTTGT+GGG | - | chr7.3:29530681-29530700 | None:intergenic | 50.0% |
| !! | GGACTTCATTTGGGGGTGTT+TGG | + | chr7.3:29529129-29529148 | MS.gene42239:intron | 50.0% |
| !! | GGAGTTGAGAGCTTTGAGAG+TGG | - | chr7.3:29528393-29528412 | None:intergenic | 50.0% |
| !! | TGAGAGCTTTGAGAGTGGCA+TGG | - | chr7.3:29528388-29528407 | None:intergenic | 50.0% |
| !! | TGAGTATGGTCACTGGCTTG+TGG | - | chr7.3:29530682-29530701 | None:intergenic | 50.0% |
| !!! | CGCAGGGTTTTGTTTGTTGG+TGG | + | chr7.3:29529002-29529021 | MS.gene42239:intron | 50.0% |
| !!! | GAGCGCAGGGTTTTGTTTGT+TGG | + | chr7.3:29528999-29529018 | MS.gene42239:intron | 50.0% |
| !!! | GGGTTTTGTTTGTTGGTGGG+GGG | + | chr7.3:29529006-29529025 | MS.gene42239:intron | 50.0% |
| ACCTCCCACTCAAACTCCTC+GGG | + | chr7.3:29532228-29532247 | MS.gene42239:intron | 55.0% | |
| CAGACACGTGACACAGGCAT+TGG | - | chr7.3:29530194-29530213 | None:intergenic | 55.0% | |
| CTGGAAATTGGGCCAGGAAC+TGG | + | chr7.3:29529268-29529287 | MS.gene42239:CDS | 55.0% | |
| GAAATCCTACCGGCGACAAC+CGG | + | chr7.3:29528294-29528313 | MS.gene42239:CDS | 55.0% | |
| GACACCCGAGGAGTTTGAGT+GGG | - | chr7.3:29532235-29532254 | None:intergenic | 55.0% | |
| GACCTCCCACTCAAACTCCT+CGG | + | chr7.3:29532227-29532246 | MS.gene42239:intron | 55.0% | |
| GATTTCGCGGCAGTGGTTTG+TGG | - | chr7.3:29528280-29528299 | None:intergenic | 55.0% | |
| GGTCCTATAACAAGGGACGG+AGG | + | chr7.3:29533219-29533238 | MS.gene42239:intron | 55.0% | |
| TGGTTTAACTGGGACACCCG+AGG | - | chr7.3:29532247-29532266 | None:intergenic | 55.0% | |
| TTGTCGCCGGTAGGATTTCG+CGG | - | chr7.3:29528293-29528312 | None:intergenic | 55.0% | |
| ! | TGGTGTCGAGGAAGGTGATG+TGG | + | chr7.3:29529243-29529262 | MS.gene42239:CDS | 55.0% |
| ! | TGGTTTGTGGCGGGAGTTGA+AGG | - | chr7.3:29528267-29528286 | None:intergenic | 55.0% |
| ! | TTTTCGACTCCGGTTGTCGC+CGG | - | chr7.3:29528306-29528325 | None:intergenic | 55.0% |
| ACCCGAGGAGTTTGAGTGGG+AGG | - | chr7.3:29532232-29532251 | None:intergenic | 60.0% | |
| CCACTGCCGCGAAATCCTAC+CGG | + | chr7.3:29528284-29528303 | MS.gene42239:CDS | 60.0% | |
| CGAGGAAGGTGATGTGGTGC+TGG | + | chr7.3:29529249-29529268 | MS.gene42239:CDS | 60.0% | |
| GCTGGGTAGAACCATCGCTC+CGG | + | chr7.3:29531109-29531128 | MS.gene42239:CDS | 60.0% | |
| GGACACCCGAGGAGTTTGAG+TGG | - | chr7.3:29532236-29532255 | None:intergenic | 60.0% | |
| GTACCGAAGCGTAGCTCGAG+TGG | - | chr7.3:29532267-29532286 | None:intergenic | 60.0% | |
| TGGGACGATACTCAGGGGTC+CGG | - | chr7.3:29531131-29531150 | None:intergenic | 60.0% | |
| ! | GTGGTGCTGGAAATTGGGCC+AGG | + | chr7.3:29529262-29529281 | MS.gene42239:CDS | 60.0% |
| ! | TTCGCGGCAGTGGTTTGTGG+CGG | - | chr7.3:29528277-29528296 | None:intergenic | 60.0% |
| ! | TTCTACGTAGCTTGCGGCCG+TGG | + | chr7.3:29528326-29528345 | MS.gene42239:CDS | 60.0% |
| !! | GAGCAACTTGTTGGCGTGGC+TGG | + | chr7.3:29529223-29529242 | MS.gene42239:CDS | 60.0% |
| AGGAGGAGACTGCTCTGCGC+TGG | + | chr7.3:29531091-29531110 | MS.gene42239:intron | 65.0% | |
| CCGGTAGGATTTCGCGGCAG+TGG | - | chr7.3:29528287-29528306 | None:intergenic | 65.0% | |
| GGAGGAGACTGCTCTGCGCT+GGG | + | chr7.3:29531092-29531111 | MS.gene42239:intron | 65.0% | |
| TACTCAGGGGTCCGGAGCGA+TGG | - | chr7.3:29531123-29531142 | None:intergenic | 65.0% | |
| ! | TCGCGGCAGTGGTTTGTGGC+GGG | - | chr7.3:29528276-29528295 | None:intergenic | 65.0% |
| ! | TGTTGGCGTGGCTGGTGTCG+AGG | + | chr7.3:29529231-29529250 | MS.gene42239:CDS | 65.0% |
| CGACTCCGGTTGTCGCCGGT+AGG | - | chr7.3:29528302-29528321 | None:intergenic | 70.0% | |
| ! | GGCGTGGCTGGTGTCGAGGA+AGG | + | chr7.3:29529235-29529254 | MS.gene42239:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 29528200 | 29533653 | 29528200 | ID=MS.gene42239 |
| chr7.3 | mRNA | 29528200 | 29533653 | 29528200 | ID=MS.gene42239.t1;Parent=MS.gene42239 |
| chr7.3 | exon | 29528200 | 29528445 | 29528200 | ID=MS.gene42239.t1.exon1;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29528200 | 29528445 | 29528200 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29529196 | 29529345 | 29529196 | ID=MS.gene42239.t1.exon2;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29529196 | 29529345 | 29529196 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29529692 | 29529748 | 29529692 | ID=MS.gene42239.t1.exon3;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29529692 | 29529748 | 29529692 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29530301 | 29530399 | 29530301 | ID=MS.gene42239.t1.exon4;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29530301 | 29530399 | 29530301 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29530875 | 29530970 | 29530875 | ID=MS.gene42239.t1.exon5;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29530875 | 29530970 | 29530875 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29531093 | 29531177 | 29531093 | ID=MS.gene42239.t1.exon6;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29531093 | 29531177 | 29531093 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29531524 | 29531576 | 29531524 | ID=MS.gene42239.t1.exon7;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29531524 | 29531576 | 29531524 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29532493 | 29532576 | 29532493 | ID=MS.gene42239.t1.exon8;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29532493 | 29532576 | 29532493 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29533336 | 29533446 | 29533336 | ID=MS.gene42239.t1.exon9;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29533336 | 29533446 | 29533336 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| chr7.3 | exon | 29533588 | 29533653 | 29533588 | ID=MS.gene42239.t1.exon10;Parent=MS.gene42239.t1 |
| chr7.3 | CDS | 29533588 | 29533653 | 29533588 | ID=cds.MS.gene42239.t1;Parent=MS.gene42239.t1 |
| Gene Sequence |
| Protein sequence |
