Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42290.t1 | XP_024635479.1 | 94.8 | 851 | 24 | 2 | 1 | 851 | 1 | 831 | 0.00E+00 | 1508 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42290.t1 | Q96EZ8 | 29.7 | 172 | 110 | 2 | 689 | 851 | 266 | 435 | 4.7e-11 | 71.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42290.t1 | G7J4N3 | 94.6 | 851 | 24 | 3 | 1 | 851 | 1 | 829 | 0.0e+00 | 1499.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene42290 | 0.811522 | 6.71E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene42290 | -0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene050874 | MS.gene42290 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene050875 | MS.gene42290 | 0.823836 | 1.12E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene42290 | -0.802418 | 5.66E-49 | -1.69E-46 |
| MS.gene053097 | MS.gene42290 | 0.807641 | 4.58E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene42290 | 0.824359 | 8.43E-54 | -1.69E-46 |
| MS.gene054662 | MS.gene42290 | 0.823561 | 1.30E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene42290 | 0.810114 | 1.35E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene42290 | -0.808953 | 2.40E-50 | -1.69E-46 |
| MS.gene057367 | MS.gene42290 | 0.817301 | 3.54E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene42290 | -0.829009 | 6.54E-55 | -1.69E-46 |
| MS.gene060291 | MS.gene42290 | 0.807564 | 4.75E-50 | -1.69E-46 |
| MS.gene06080 | MS.gene42290 | 0.851872 | 6.69E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42290.t1 | MTR_3g113050 | 94.477 | 851 | 25 | 3 | 1 | 851 | 1 | 829 | 0.0 | 1642 |
| MS.gene42290.t1 | MTR_8g076470 | 31.849 | 584 | 302 | 22 | 300 | 851 | 199 | 718 | 1.78e-49 | 187 |
| MS.gene42290.t1 | MTR_8g076470 | 42.424 | 132 | 65 | 4 | 1 | 125 | 1 | 128 | 4.11e-19 | 93.2 |
| MS.gene42290.t1 | MTR_8g076570 | 43.893 | 262 | 124 | 8 | 607 | 851 | 526 | 781 | 8.84e-46 | 177 |
| MS.gene42290.t1 | MTR_8g076470 | 28.571 | 511 | 270 | 19 | 300 | 779 | 199 | 645 | 1.78e-25 | 112 |
| MS.gene42290.t1 | MTR_8g076470 | 42.424 | 132 | 65 | 4 | 1 | 125 | 1 | 128 | 2.31e-19 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42290.t1 | AT3G54350 | 35.793 | 542 | 260 | 16 | 315 | 851 | 219 | 677 | 3.77e-72 | 251 |
| MS.gene42290.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.02e-31 | 132 |
| MS.gene42290.t1 | AT3G54350 | 35.793 | 542 | 260 | 16 | 315 | 851 | 219 | 677 | 3.77e-72 | 251 |
| MS.gene42290.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.02e-31 | 132 |
| MS.gene42290.t1 | AT3G54350 | 35.793 | 542 | 260 | 16 | 315 | 851 | 219 | 677 | 3.77e-72 | 251 |
| MS.gene42290.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.02e-31 | 132 |
| MS.gene42290.t1 | AT3G54350 | 35.793 | 542 | 260 | 16 | 315 | 851 | 219 | 677 | 3.77e-72 | 251 |
| MS.gene42290.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.02e-31 | 132 |
| MS.gene42290.t1 | AT3G54350 | 35.793 | 542 | 260 | 16 | 315 | 851 | 219 | 677 | 3.77e-72 | 251 |
| MS.gene42290.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.02e-31 | 132 |
| MS.gene42290.t1 | AT1G75530 | 54.140 | 157 | 70 | 2 | 695 | 851 | 378 | 532 | 1.08e-43 | 167 |
| MS.gene42290.t1 | AT1G75530 | 38.655 | 119 | 55 | 3 | 14 | 132 | 5 | 105 | 2.11e-15 | 80.9 |
| MS.gene42290.t1 | AT1G60700 | 39.181 | 171 | 90 | 3 | 682 | 851 | 332 | 489 | 3.75e-29 | 123 |
| MS.gene42290.t1 | AT1G60700 | 40.000 | 130 | 64 | 3 | 682 | 810 | 332 | 448 | 2.11e-20 | 95.9 |
Find 167 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCAAAGTTCTTCAAAAT+TGG | 0.145974 | 3.2:+89845103 | MS.gene42290:CDS |
| CTACATCCCGTTCCTGTTTC+AGG | 0.165368 | 3.2:-89846800 | None:intergenic |
| AACTCTACTTCAGCCATTTC+AGG | 0.207699 | 3.2:-89845982 | None:intergenic |
| AGTGGGGTCCGCAGATGTTC+TGG | 0.213381 | 3.2:+89846860 | MS.gene42290:CDS |
| AATGATAATTATGTGGTAAA+TGG | 0.230760 | 3.2:+89845265 | MS.gene42290:CDS |
| TTATACCTCAATCAGATAAT+TGG | 0.264389 | 3.2:-89848994 | None:intergenic |
| CCTCCTCAGGTATATTGTTT+TGG | 0.267136 | 3.2:-89845465 | None:intergenic |
| CTTCCTACAGGTACTTGATA+TGG | 0.281187 | 3.2:+89847067 | MS.gene42290:intron |
| CCATCATCTGGTAATGATTA+TGG | 0.283144 | 3.2:+89846402 | MS.gene42290:CDS |
| GCCTTTGATGCACATGTTAA+AGG | 0.285501 | 3.2:+89846102 | MS.gene42290:CDS |
| AGATGATGGAACTGGTATAT+TGG | 0.287606 | 3.2:-89846388 | None:intergenic |
| TTGAGTGGCGACCATATAAT+AGG | 0.290825 | 3.2:-89847980 | None:intergenic |
| GTTATCACTTCCTGACATTC+AGG | 0.301168 | 3.2:+89845720 | MS.gene42290:CDS |
| ACGGGAGCCCATTGCCTTCC+AGG | 0.307560 | 3.2:+89846507 | MS.gene42290:CDS |
| TTACTAAACTCTCCAATTGA+TGG | 0.323717 | 3.2:+89845943 | MS.gene42290:CDS |
| TGCTTGCGAGGATGGTTATC+TGG | 0.327115 | 3.2:+89845807 | MS.gene42290:CDS |
| ACAACTCCGTTAATTAGTTC+AGG | 0.344801 | 3.2:-89846249 | None:intergenic |
| TCATCATTGGATGGAACTTC+CGG | 0.350267 | 3.2:-89846297 | None:intergenic |
| GATGATGGAACTGGTATATT+GGG | 0.354956 | 3.2:-89846387 | None:intergenic |
| AACTCGGAGCACAAATTTGC+AGG | 0.358484 | 3.2:-89845634 | None:intergenic |
| GACGCCTCTTCCTCTATAAC+AGG | 0.361911 | 3.2:+89845055 | MS.gene42290:CDS |
| TTGCAGGGTCATTGTTGATT+TGG | 0.364365 | 3.2:-89845618 | None:intergenic |
| CTATGACCCTATCGTATCTA+AGG | 0.368053 | 3.2:+89845033 | MS.gene42290:CDS |
| AGCAGCTGATTCGGATGAAC+AGG | 0.372820 | 3.2:-89846358 | None:intergenic |
| GCCTCTACATCAGAATAATA+AGG | 0.375340 | 3.2:-89846954 | None:intergenic |
| AATGGAACTGCCGAGGAATT+CGG | 0.383170 | 3.2:+89845520 | MS.gene42290:CDS |
| GGCTATCATAAGGCTGGAGC+AGG | 0.390120 | 3.2:+89847908 | MS.gene42290:CDS |
| CAATTTCCTGAACTAATTAA+CGG | 0.393033 | 3.2:+89846243 | MS.gene42290:CDS |
| TGTTTCAGGCTAGAACCATT+AGG | 0.394864 | 3.2:-89846786 | None:intergenic |
| CGGATGAACAGGAAATTGTT+GGG | 0.395596 | 3.2:-89846347 | None:intergenic |
| AGTGAAGTTTAAGAGTGAAT+TGG | 0.399488 | 3.2:-89845839 | None:intergenic |
| GGAGCATTGGCCCTATTATA+TGG | 0.401345 | 3.2:+89847969 | MS.gene42290:CDS |
| CAAGACCAACGTTGAGGTTG+AGG | 0.402737 | 3.2:+89844339 | MS.gene42290:CDS |
| CTGAGGCCATTTCCGAGTGC+TGG | 0.404415 | 3.2:-89846750 | None:intergenic |
| TGCCTTCCAGGACCTGTTTG+TGG | 0.404574 | 3.2:+89846519 | MS.gene42290:CDS |
| AGAAATCATGGCCAACCTAA+TGG | 0.412077 | 3.2:+89846771 | MS.gene42290:CDS |
| CTGAAGCGGAAGCTGCCATT+TGG | 0.420213 | 3.2:-89846209 | None:intergenic |
| TCGGATGAACAGGAAATTGT+TGG | 0.429271 | 3.2:-89846348 | None:intergenic |
| GTGGGGTCCGCAGATGTTCT+GGG | 0.429944 | 3.2:+89846861 | MS.gene42290:CDS |
| TGAATTTGAGGTTCCTCCTC+AGG | 0.430219 | 3.2:-89845478 | None:intergenic |
| GCTTTCCAATTATCTGATTG+AGG | 0.431059 | 3.2:+89848989 | MS.gene42290:CDS |
| ATGGATTCTGTTGGAAAAGA+TGG | 0.431255 | 3.2:+89845883 | MS.gene42290:CDS |
| AATTCACTCTTAAACTTCAC+TGG | 0.433717 | 3.2:+89845841 | MS.gene42290:CDS |
| CAGGTTTCTTCTCAGACAAC+GGG | 0.434080 | 3.2:+89846489 | MS.gene42290:CDS |
| TTTGCAGAATGGAGCTTCCT+TGG | 0.435277 | 3.2:+89844931 | MS.gene42290:intron |
| TAATGGTTCTAGCCTGAAAC+AGG | 0.435818 | 3.2:+89846788 | MS.gene42290:CDS |
| AAGAAACCAGCACTCGGAAA+TGG | 0.436278 | 3.2:+89846744 | MS.gene42290:CDS |
| TCATATAAATCATGATCATC+AGG | 0.445771 | 3.2:-89847098 | None:intergenic |
| TGATCTGAACAACCATCAAT+TGG | 0.446899 | 3.2:-89845955 | None:intergenic |
| ACCGGCATGTCCTGAATGTC+AGG | 0.447641 | 3.2:-89845730 | None:intergenic |
| CATCATTGGATGGAACTTCC+GGG | 0.449026 | 3.2:-89846296 | None:intergenic |
| TCCTTGGAAGCAATTGCAAA+AGG | 0.451436 | 3.2:+89844947 | MS.gene42290:CDS |
| AACACAATGTCACAATCTAA+TGG | 0.456391 | 3.2:+89846159 | MS.gene42290:CDS |
| ACATTCAGGACATGCCGGTC+TGG | 0.456435 | 3.2:+89845734 | MS.gene42290:CDS |
| ATTGTTTCCACCTAGGTCAC+TGG | 0.459702 | 3.2:-89846613 | None:intergenic |
| GATTCTATTGCTTGCGAGGA+TGG | 0.460549 | 3.2:+89845799 | MS.gene42290:CDS |
| TTTCATGTAGATATTGACTT+AGG | 0.461460 | 3.2:+89848549 | MS.gene42290:CDS |
| AATATACCAGTTCCATCATC+TGG | 0.465195 | 3.2:+89846390 | MS.gene42290:CDS |
| AATCATGATCCGTCACACTA+TGG | 0.467332 | 3.2:+89845346 | MS.gene42290:CDS |
| TTAATTAGTTCAGGAAATTG+AGG | 0.469269 | 3.2:-89846240 | None:intergenic |
| ACATTATCCTCATGAATTTG+AGG | 0.475097 | 3.2:-89845490 | None:intergenic |
| GGGTAGGAAAACATCATCAT+TGG | 0.478904 | 3.2:-89846310 | None:intergenic |
| TTGAGGAAATACAAGAAAGA+TGG | 0.479331 | 3.2:+89844999 | MS.gene42290:CDS |
| TGAGTGGCGACCATATAATA+GGG | 0.480798 | 3.2:-89847979 | None:intergenic |
| TTGAAGAACTTTGATGGGAG+AGG | 0.480913 | 3.2:-89845097 | None:intergenic |
| TATTGAATCGCCGAATTCCT+CGG | 0.484243 | 3.2:-89845530 | None:intergenic |
| CCATAATCATTACCAGATGA+TGG | 0.485021 | 3.2:-89846402 | None:intergenic |
| AACTAGAAAATTGTAGTCCA+TGG | 0.490147 | 3.2:-89845233 | None:intergenic |
| AAACTAAGCGGGCTATCATA+AGG | 0.490452 | 3.2:+89847898 | MS.gene42290:CDS |
| TTCTTATATGCAGAGAGCTA+TGG | 0.490508 | 3.2:+89847938 | MS.gene42290:CDS |
| AACAGGTCCTGGAAGGCAAT+GGG | 0.491562 | 3.2:-89846514 | None:intergenic |
| GAAGCTGCCATTTGGAACTC+TGG | 0.492070 | 3.2:-89846201 | None:intergenic |
| TTCAGATCAGATACCTGAAA+TGG | 0.493723 | 3.2:+89845969 | MS.gene42290:CDS |
| TCTGTTGGAAAAGATGGGAT+TGG | 0.498372 | 3.2:+89845889 | MS.gene42290:CDS |
| CAATCTCATATCTAGACGTC+AGG | 0.498422 | 3.2:+89848587 | MS.gene42290:CDS |
| TTAGAACCACAAACAGGTCC+TGG | 0.499033 | 3.2:-89846525 | None:intergenic |
| TTCTAGCCTGAAACAGGAAC+GGG | 0.499074 | 3.2:+89846794 | MS.gene42290:CDS |
| TAATTAGTTCAGGAAATTGA+GGG | 0.501306 | 3.2:-89846239 | None:intergenic |
| CTATTTCTGATGGATTCTGT+TGG | 0.501811 | 3.2:+89845874 | MS.gene42290:CDS |
| TAGAGATATGCAAACTTCCA+TGG | 0.503196 | 3.2:+89845216 | MS.gene42290:CDS |
| TTGCATCATTGTTTCCACCT+AGG | 0.504103 | 3.2:-89846620 | None:intergenic |
| AGATGGTGGTTTACAGTGAA+AGG | 0.504710 | 3.2:+89846889 | MS.gene42290:CDS |
| GCCTGAAAACTGTGCACTCG+AGG | 0.506036 | 3.2:+89845300 | MS.gene42290:CDS |
| TTCAGAAAATGATAATTATG+TGG | 0.507506 | 3.2:+89845258 | MS.gene42290:CDS |
| ACCTTTAACATGTGCATCAA+AGG | 0.508533 | 3.2:-89846103 | None:intergenic |
| ATGCTCGAAACCTGTTATAG+AGG | 0.510920 | 3.2:-89845065 | None:intergenic |
| TCATTACCAGATGATGGAAC+TGG | 0.511561 | 3.2:-89846396 | None:intergenic |
| TCAGGTTTCTTCTCAGACAA+CGG | 0.515527 | 3.2:+89846488 | MS.gene42290:CDS |
| TGTTCTTCTGTTCTCCAGAC+CGG | 0.516912 | 3.2:-89845748 | None:intergenic |
| GGAAATGGCCTCAGAAATCA+TGG | 0.518899 | 3.2:+89846759 | MS.gene42290:CDS |
| TTATTCTGATGTAGAGGCCA+TGG | 0.519752 | 3.2:+89846959 | MS.gene42290:CDS |
| TTTACGAAGCTAACATCGAC+AGG | 0.520007 | 3.2:-89846687 | None:intergenic |
| GGTCTGGAGAACAGAAGAAC+AGG | 0.520859 | 3.2:+89845750 | MS.gene42290:CDS |
| AAACAGGTCCTGGAAGGCAA+TGG | 0.521092 | 3.2:-89846515 | None:intergenic |
| TTCTTCTCCTTGGACTTCCG+AGG | 0.522656 | 3.2:+89844303 | MS.gene42290:CDS |
| GAGGATAATGTGCTTCTGAA+TGG | 0.524333 | 3.2:+89845502 | MS.gene42290:CDS |
| GACTGAAACAGAGCTGTTAG+CGG | 0.526338 | 3.2:+89846080 | MS.gene42290:CDS |
| TGAGGAAGAGCTATTTCTGA+TGG | 0.528232 | 3.2:+89845864 | MS.gene42290:CDS |
| CTGACGTCTAGATATGAGAT+TGG | 0.531053 | 3.2:-89848586 | None:intergenic |
| GATTTATATGATAATGAAGA+AGG | 0.531518 | 3.2:+89847110 | MS.gene42290:CDS |
| TAAGCGGGCTATCATAAGGC+TGG | 0.532916 | 3.2:+89847902 | MS.gene42290:CDS |
| TATGGCTTCACATGGAGCAT+TGG | 0.533692 | 3.2:+89847956 | MS.gene42290:CDS |
| CATATAATCTTCATCAAACT+CGG | 0.539231 | 3.2:-89845650 | None:intergenic |
| ATTATTGCTTCCAGTGACCT+AGG | 0.539814 | 3.2:+89846603 | MS.gene42290:CDS |
| TCCTTATTATTCTGATGTAG+AGG | 0.540004 | 3.2:+89846953 | MS.gene42290:CDS |
| TGGAAGTTTGCATATCTCTA+CGG | 0.543472 | 3.2:-89845213 | None:intergenic |
| AGAAGAAACCTGAGCTCCTA+CGG | 0.544483 | 3.2:-89846478 | None:intergenic |
| TCCTGACATTCAGGACATGC+CGG | 0.548782 | 3.2:+89845729 | MS.gene42290:CDS |
| TCAGTTGCAACATGCTGAAG+TGG | 0.548794 | 3.2:+89846842 | MS.gene42290:CDS |
| TTGAGGGTCTTTAGCTGAAG+CGG | 0.550564 | 3.2:-89846223 | None:intergenic |
| GAAACCTGTTATAGAGGAAG+AGG | 0.551494 | 3.2:-89845059 | None:intergenic |
| CAGGATAATATTCCATGTGA+TGG | 0.557447 | 3.2:+89845769 | MS.gene42290:CDS |
| GAATTCCCACACTCTAACTC+AGG | 0.557612 | 3.2:-89845682 | None:intergenic |
| ATTGGTAAATCTTATTATGA+CGG | 0.558102 | 3.2:+89845907 | MS.gene42290:CDS |
| CAGTTGCAACATGCTGAAGT+GGG | 0.561922 | 3.2:+89846843 | MS.gene42290:CDS |
| TGCTCTACATGCAAGTCCTA+AGG | 0.563413 | 3.2:+89846659 | MS.gene42290:CDS |
| TCAGGCTAGAACCATTAGGT+TGG | 0.564102 | 3.2:-89846782 | None:intergenic |
| TGGATTCTGTTGGAAAAGAT+GGG | 0.564113 | 3.2:+89845884 | MS.gene42290:CDS |
| GATTCACCTGAGTTAGAGTG+TGG | 0.567474 | 3.2:+89845676 | MS.gene42290:CDS |
| CAGAGAGCTATGGCTTCACA+TGG | 0.568900 | 3.2:+89847948 | MS.gene42290:CDS |
| TGTTCTGGGGTCTGAGATGG+TGG | 0.569785 | 3.2:+89846875 | MS.gene42290:CDS |
| GGAGATAGAGCTAGCAGGAG+AGG | 0.577575 | 3.2:+89846423 | MS.gene42290:CDS |
| TCTTGATATAGTACTTTGAG+TGG | 0.578272 | 3.2:-89847995 | None:intergenic |
| AAAAGATTCTATTGCTTGCG+AGG | 0.580675 | 3.2:+89845795 | MS.gene42290:CDS |
| CCTGAAAACTGTGCACTCGA+GGG | 0.581553 | 3.2:+89845301 | MS.gene42290:CDS |
| CTTGAGCAAAAGATCATCCT+CGG | 0.583382 | 3.2:-89844320 | None:intergenic |
| TGTAATAAATACTGAAGACC+CGG | 0.584235 | 3.2:+89846278 | MS.gene42290:CDS |
| ACAGGTACTTGATATGGACT+TGG | 0.587590 | 3.2:+89847073 | MS.gene42290:intron |
| GGATGAACAGGAAATTGTTG+GGG | 0.588114 | 3.2:-89846346 | None:intergenic |
| TAGGTTGGCCATGATTTCTG+AGG | 0.588324 | 3.2:-89846767 | None:intergenic |
| AGATGTTCTGGGGTCTGAGA+TGG | 0.588696 | 3.2:+89846872 | MS.gene42290:CDS |
| GTAGATATTGACTTAGGCAA+AGG | 0.590406 | 3.2:+89848555 | MS.gene42290:CDS |
| AGGAAAACATCATCATTGGA+TGG | 0.590849 | 3.2:-89846306 | None:intergenic |
| GCTATCATAAGGCTGGAGCA+GGG | 0.592080 | 3.2:+89847909 | MS.gene42290:CDS |
| GATATTGACTTAGGCAAAGG+AGG | 0.597784 | 3.2:+89848558 | MS.gene42290:CDS |
| AGATCATCCTCGGAAGTCCA+AGG | 0.600476 | 3.2:-89844310 | None:intergenic |
| TTAGTTGGACGATCAACAGA+AGG | 0.601805 | 3.2:+89848525 | MS.gene42290:CDS |
| CCAAAACAATATACCTGAGG+AGG | 0.602011 | 3.2:+89845465 | MS.gene42290:CDS |
| AGGCGTCCTTAGATACGATA+GGG | 0.606556 | 3.2:-89845039 | None:intergenic |
| ATCAACACGAAGAAACTAAG+CGG | 0.612075 | 3.2:+89847886 | MS.gene42290:CDS |
| GGGGAGGCTCATTAAAGGGT+AGG | 0.614820 | 3.2:-89846326 | None:intergenic |
| TCTGGAAGACCATAGTGTGA+CGG | 0.616832 | 3.2:-89845355 | None:intergenic |
| ACTCTTAAACTTCACTGGTG+AGG | 0.618343 | 3.2:+89845846 | MS.gene42290:CDS |
| ATTATGGAGATAGAGCTAGC+AGG | 0.621915 | 3.2:+89846418 | MS.gene42290:CDS |
| ACAGAAGTAGACGACAATGC+AGG | 0.622677 | 3.2:+89846054 | MS.gene42290:CDS |
| GTTCTAGCCTGAAACAGGAA+CGG | 0.624239 | 3.2:+89846793 | MS.gene42290:CDS |
| AACCACAAACAGGTCCTGGA+AGG | 0.625069 | 3.2:-89846521 | None:intergenic |
| TCAACACGAAGAAACTAAGC+GGG | 0.626611 | 3.2:+89847887 | MS.gene42290:CDS |
| TGGGGTCCGCAGATGTTCTG+GGG | 0.628917 | 3.2:+89846862 | MS.gene42290:CDS |
| GAGGCGTCCTTAGATACGAT+AGG | 0.630079 | 3.2:-89845040 | None:intergenic |
| TTTGCTCAAGACCAACGTTG+AGG | 0.631802 | 3.2:+89844333 | MS.gene42290:CDS |
| ATTCACCTGAGTTAGAGTGT+GGG | 0.634516 | 3.2:+89845677 | MS.gene42290:CDS |
| AATGTCACAATCTAATGGCG+TGG | 0.640479 | 3.2:+89846164 | MS.gene42290:CDS |
| CTCAGACCCCAGAACATCTG+CGG | 0.641623 | 3.2:-89846868 | None:intergenic |
| ACTCGGAGCACAAATTTGCA+GGG | 0.643928 | 3.2:-89845633 | None:intergenic |
| TCACATAAGAAACCAGCACT+CGG | 0.662353 | 3.2:+89846738 | MS.gene42290:CDS |
| ATAAACCTCAACCTCAACGT+TGG | 0.672629 | 3.2:-89844344 | None:intergenic |
| GCTTCTGAATGGAACTGCCG+AGG | 0.673898 | 3.2:+89845513 | MS.gene42290:CDS |
| AGTTGCAACATGCTGAAGTG+GGG | 0.674634 | 3.2:+89846844 | MS.gene42290:CDS |
| GGAGGAACCTCAAATTCATG+AGG | 0.676617 | 3.2:+89845483 | MS.gene42290:CDS |
| GTACTATATCAAGAAAACTG+AGG | 0.689460 | 3.2:+89848004 | MS.gene42290:CDS |
| TTACAGTGAAAGGTTAGACG+AGG | 0.692509 | 3.2:+89846899 | MS.gene42290:CDS |
| ATTGCTTCCAGTGACCTAGG+TGG | 0.693297 | 3.2:+89846606 | MS.gene42290:CDS |
| AATAGCACAGAATTGCACAC+TGG | 0.709257 | 3.2:+89848951 | MS.gene42290:CDS |
| GATGAACAGGAAATTGTTGG+GGG | 0.710491 | 3.2:-89846345 | None:intergenic |
| GGACCAAAACAATATACCTG+AGG | 0.722831 | 3.2:+89845462 | MS.gene42290:CDS |
| TCTGTGCGACATGAAACAGA+CGG | 0.723189 | 3.2:-89846036 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTCAAAAAGTAAAAAT+CGG | - | chr3.2:89848090-89848109 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTAAATTTTGAAA+GGG | + | chr3.2:89848394-89848413 | MS.gene42290:intron | 10.0% |
| !!! | TTTTTGTTTTAAATTTTGAA+AGG | + | chr3.2:89848393-89848412 | MS.gene42290:intron | 10.0% |
| !! | ATAAATATAAACGTACTATA+AGG | + | chr3.2:89847416-89847435 | MS.gene42290:intron | 15.0% |
| !! | CTAGATATAGAAAAATTTAT+TGG | + | chr3.2:89845556-89845575 | MS.gene42290:CDS | 15.0% |
| !! | GATAGTATTAAAAAATGAAA+TGG | - | chr3.2:89844576-89844595 | None:intergenic | 15.0% |
| !! | TATATTTATAATTGCAAAAC+AGG | - | chr3.2:89848327-89848346 | None:intergenic | 15.0% |
| !!! | AATGCAGTTTTTTTTTTTTT+TGG | + | chr3.2:89848644-89848663 | MS.gene42290:intron | 15.0% |
| !! | AAATATGATAAAACAGATTC+TGG | - | chr3.2:89847617-89847636 | None:intergenic | 20.0% |
| !! | AATGATAATTATGTGGTAAA+TGG | + | chr3.2:89845265-89845284 | MS.gene42290:CDS | 20.0% |
| !! | AGATTATTAGTACACATATA+TGG | + | chr3.2:89848208-89848227 | MS.gene42290:intron | 20.0% |
| !! | ATAAAAACGGAAAGTTTAAT+TGG | - | chr3.2:89848855-89848874 | None:intergenic | 20.0% |
| !! | ATCATAAAAATGGATAAAGA+TGG | + | chr3.2:89848885-89848904 | MS.gene42290:CDS | 20.0% |
| !! | ATTGGTAAATCTTATTATGA+CGG | + | chr3.2:89845907-89845926 | MS.gene42290:CDS | 20.0% |
| !! | CAAAAGAAACTAAATTATGT+TGG | - | chr3.2:89847790-89847809 | None:intergenic | 20.0% |
| !! | TATTGAGGTCAATTTATATT+TGG | - | chr3.2:89848830-89848849 | None:intergenic | 20.0% |
| !! | TCATTCTACATTAAAAACAT+TGG | + | chr3.2:89848909-89848928 | MS.gene42290:CDS | 20.0% |
| !! | TGAAATGAATGAAATTGAAA+AGG | - | chr3.2:89844414-89844433 | None:intergenic | 20.0% |
| !! | TTCAGAAAATGATAATTATG+TGG | + | chr3.2:89845258-89845277 | MS.gene42290:CDS | 20.0% |
| !!! | AATTTTATGGATGTTGATAT+TGG | + | chr3.2:89845379-89845398 | MS.gene42290:CDS | 20.0% |
| !!! | ATATCTACTCATTTAAAATC+TGG | + | chr3.2:89848676-89848695 | MS.gene42290:intron | 20.0% |
| !!! | ATTTAGTTTCTTTTGTGATT+CGG | + | chr3.2:89847795-89847814 | MS.gene42290:intron | 20.0% |
| !!! | CCAAATTTTTTAGCAAAATA+AGG | - | chr3.2:89847377-89847396 | None:intergenic | 20.0% |
| !!! | CCTTATTTTGCTAAAAAATT+TGG | + | chr3.2:89847374-89847393 | MS.gene42290:intron | 20.0% |
| !!! | GATTTATATGATAATGAAGA+AGG | + | chr3.2:89847110-89847129 | MS.gene42290:CDS | 20.0% |
| !!! | TTTTTATGTGTGTTTCAATT+TGG | + | chr3.2:89844767-89844786 | MS.gene42290:intron | 20.0% |
| ! | AAAGTTTAATTGGCATATTG+AGG | - | chr3.2:89848845-89848864 | None:intergenic | 25.0% |
| ! | AATAAGTCAGAAAATTGCAA+AGG | - | chr3.2:89847039-89847058 | None:intergenic | 25.0% |
| ! | AATAGAAATGATCTTCAGTT+AGG | - | chr3.2:89847266-89847285 | None:intergenic | 25.0% |
| ! | AATATAAACGTACTATAAGG+AGG | + | chr3.2:89847419-89847438 | MS.gene42290:intron | 25.0% |
| ! | ATATAAACGTACTATAAGGA+GGG | + | chr3.2:89847420-89847439 | MS.gene42290:intron | 25.0% |
| ! | ATGAATGAGTAAATTAGTTG+AGG | - | chr3.2:89844448-89844467 | None:intergenic | 25.0% |
| ! | CAATTTCCTGAACTAATTAA+CGG | + | chr3.2:89846243-89846262 | MS.gene42290:CDS | 25.0% |
| ! | CATATAATCTTCATCAAACT+CGG | - | chr3.2:89845653-89845672 | None:intergenic | 25.0% |
| ! | TAATTAGTTCAGGAAATTGA+GGG | - | chr3.2:89846242-89846261 | None:intergenic | 25.0% |
| ! | TACTTCAATGGTAAATAGTT+GGG | + | chr3.2:89848781-89848800 | MS.gene42290:intron | 25.0% |
| ! | TACTTTAATACTCTTTCAGT+TGG | + | chr3.2:89847478-89847497 | MS.gene42290:intron | 25.0% |
| ! | TCATATAAATCATGATCATC+AGG | - | chr3.2:89847101-89847120 | None:intergenic | 25.0% |
| ! | TTAATTAGTTCAGGAAATTG+AGG | - | chr3.2:89846243-89846262 | None:intergenic | 25.0% |
| ! | TTACTTCAATGGTAAATAGT+TGG | + | chr3.2:89848780-89848799 | MS.gene42290:intron | 25.0% |
| ! | TTATACCTCAATCAGATAAT+TGG | - | chr3.2:89848997-89849016 | None:intergenic | 25.0% |
| ! | TTATCACAAAAAATAACGTG+AGG | - | chr3.2:89848126-89848145 | None:intergenic | 25.0% |
| !! | ATTAGTTTATAGTTACACTG+TGG | + | chr3.2:89848723-89848742 | MS.gene42290:intron | 25.0% |
| !! | TCAACATCCATAAAATTTTC+TGG | - | chr3.2:89845376-89845395 | None:intergenic | 25.0% |
| !! | TTTTAACACATTGTAGTCTA+AGG | + | chr3.2:89844731-89844750 | MS.gene42290:intron | 25.0% |
| !!! | AAGAAGGTATTACTATTATG+TGG | + | chr3.2:89847126-89847145 | MS.gene42290:intron | 25.0% |
| !!! | ACAAAATGTGCATTTTAGTT+CGG | - | chr3.2:89848370-89848389 | None:intergenic | 25.0% |
| !!! | CAATTTTGAAGAACTTTGAT+GGG | - | chr3.2:89845105-89845124 | None:intergenic | 25.0% |
| !!! | GCTTTAAGAAATTACTTCAA+TGG | + | chr3.2:89848769-89848788 | MS.gene42290:intron | 25.0% |
| !!! | TTCTCGAAAATATAGTTTTG+AGG | + | chr3.2:89844982-89845001 | MS.gene42290:CDS | 25.0% |
| !!! | TTTATTTTAGAACCACAAAC+AGG | - | chr3.2:89846534-89846553 | None:intergenic | 25.0% |
| !!! | TTTCATGTAGATATTGACTT+AGG | + | chr3.2:89848549-89848568 | MS.gene42290:CDS | 25.0% |
| AACACAATGTCACAATCTAA+TGG | + | chr3.2:89846159-89846178 | MS.gene42290:CDS | 30.0% | |
| AACTAGAAAATTGTAGTCCA+TGG | - | chr3.2:89845236-89845255 | None:intergenic | 30.0% | |
| AAGCAAAAACATTCACACAA+AGG | - | chr3.2:89847708-89847727 | None:intergenic | 30.0% | |
| AATTCACTCTTAAACTTCAC+TGG | + | chr3.2:89845841-89845860 | MS.gene42290:CDS | 30.0% | |
| ACATTATCCTCATGAATTTG+AGG | - | chr3.2:89845493-89845512 | None:intergenic | 30.0% | |
| AGTGAAGTTTAAGAGTGAAT+TGG | - | chr3.2:89845842-89845861 | None:intergenic | 30.0% | |
| ATCGAAAATGAAAGAGAGAA+AGG | - | chr3.2:89844371-89844390 | None:intergenic | 30.0% | |
| ATGTTTCAGAATTAACTAGC+AGG | - | chr3.2:89847649-89847668 | None:intergenic | 30.0% | |
| CCATCAAAGTTCTTCAAAAT+TGG | + | chr3.2:89845103-89845122 | MS.gene42290:CDS | 30.0% | |
| GATTGCCTGAAACATAAAAA+CGG | - | chr3.2:89848868-89848887 | None:intergenic | 30.0% | |
| GCAAATCAAATCTAACTAGT+GGG | + | chr3.2:89848465-89848484 | MS.gene42290:intron | 30.0% | |
| GTACTATATCAAGAAAACTG+AGG | + | chr3.2:89848004-89848023 | MS.gene42290:CDS | 30.0% | |
| GTTTCAGGCAATCATAAAAA+TGG | + | chr3.2:89848875-89848894 | MS.gene42290:intron | 30.0% | |
| TATAAACGTACTATAAGGAG+GGG | + | chr3.2:89847421-89847440 | MS.gene42290:intron | 30.0% | |
| TCCTTATTATTCTGATGTAG+AGG | + | chr3.2:89846953-89846972 | MS.gene42290:CDS | 30.0% | |
| TCGAAAATGAAAGAGAGAAA+GGG | - | chr3.2:89844370-89844389 | None:intergenic | 30.0% | |
| TCTACATTAAAAACATTGGC+AGG | + | chr3.2:89848913-89848932 | MS.gene42290:CDS | 30.0% | |
| TCTTGATATAGTACTTTGAG+TGG | - | chr3.2:89847998-89848017 | None:intergenic | 30.0% | |
| TGAGGTCAATTTATATTTGG+TGG | - | chr3.2:89848827-89848846 | None:intergenic | 30.0% | |
| TGCAAATCAAATCTAACTAG+TGG | + | chr3.2:89848464-89848483 | MS.gene42290:intron | 30.0% | |
| TGTAATAAATACTGAAGACC+CGG | + | chr3.2:89846278-89846297 | MS.gene42290:CDS | 30.0% | |
| TTACTAAACTCTCCAATTGA+TGG | + | chr3.2:89845943-89845962 | MS.gene42290:CDS | 30.0% | |
| TTGAGGAAATACAAGAAAGA+TGG | + | chr3.2:89844999-89845018 | MS.gene42290:CDS | 30.0% | |
| TTTAAACCAGAATCCTGAAA+TGG | - | chr3.2:89844890-89844909 | None:intergenic | 30.0% | |
| TTTGAACCATCATAAAAGCA+TGG | - | chr3.2:89848491-89848510 | None:intergenic | 30.0% | |
| ! | ACAGGTATTTTCAACTACAT+TGG | - | chr3.2:89848309-89848328 | None:intergenic | 30.0% |
| ! | ACGAATTTTTGAATTCCAAG+AGG | + | chr3.2:89847449-89847468 | MS.gene42290:intron | 30.0% |
| ! | AGATTCAACTTTTGGATTTG+TGG | + | chr3.2:89847566-89847585 | MS.gene42290:intron | 30.0% |
| ! | CAAGCTTTATATTTGCAGAA+TGG | + | chr3.2:89844920-89844939 | MS.gene42290:intron | 30.0% |
| ! | CAGATTATGTTTCTAACATG+AGG | + | chr3.2:89848241-89848260 | MS.gene42290:intron | 30.0% |
| ! | TGGTCTTCCAGAAAATTTTA+TGG | + | chr3.2:89845366-89845385 | MS.gene42290:CDS | 30.0% |
| !! | ACTTTCCGTTTTTATGTTTC+AGG | + | chr3.2:89848860-89848879 | MS.gene42290:intron | 30.0% |
| !! | CCAATTTTGAAGAACTTTGA+TGG | - | chr3.2:89845106-89845125 | None:intergenic | 30.0% |
| !! | TGCAACTGATTATTTTCAAG+TGG | - | chr3.2:89846831-89846850 | None:intergenic | 30.0% |
| !! | TGCTCTAACATTGTTTTTCT+AGG | + | chr3.2:89844487-89844506 | MS.gene42290:intron | 30.0% |
| !!! | CAAAATGTGCATTTTAGTTC+GGG | - | chr3.2:89848369-89848388 | None:intergenic | 30.0% |
| AAAAGATTCTATTGCTTGCG+AGG | + | chr3.2:89845795-89845814 | MS.gene42290:CDS | 35.0% | |
| AAACTGCATTAAGTCAGAGT+TGG | - | chr3.2:89848634-89848653 | None:intergenic | 35.0% | |
| AACATGCTATGTTGTTGTCA+TGG | + | chr3.2:89847541-89847560 | MS.gene42290:intron | 35.0% | |
| AATATACCAGTTCCATCATC+TGG | + | chr3.2:89846390-89846409 | MS.gene42290:CDS | 35.0% | |
| ACAACTCCGTTAATTAGTTC+AGG | - | chr3.2:89846252-89846271 | None:intergenic | 35.0% | |
| ACCTTTAACATGTGCATCAA+AGG | - | chr3.2:89846106-89846125 | None:intergenic | 35.0% | |
| AGGAAAACATCATCATTGGA+TGG | - | chr3.2:89846309-89846328 | None:intergenic | 35.0% | |
| ATAAACGTACTATAAGGAGG+GGG | + | chr3.2:89847422-89847441 | MS.gene42290:intron | 35.0% | |
| ATCAACACGAAGAAACTAAG+CGG | + | chr3.2:89847886-89847905 | MS.gene42290:CDS | 35.0% | |
| ATGGATTCTGTTGGAAAAGA+TGG | + | chr3.2:89845883-89845902 | MS.gene42290:CDS | 35.0% | |
| ATTAAAGTAGTGCAACCTCT+TGG | - | chr3.2:89847467-89847486 | None:intergenic | 35.0% | |
| CAGGATAATATTCCATGTGA+TGG | + | chr3.2:89845769-89845788 | MS.gene42290:CDS | 35.0% | |
| CCATAATCATTACCAGATGA+TGG | - | chr3.2:89846405-89846424 | None:intergenic | 35.0% | |
| GCCTCTACATCAGAATAATA+AGG | - | chr3.2:89846957-89846976 | None:intergenic | 35.0% | |
| GCTTTCCAATTATCTGATTG+AGG | + | chr3.2:89848989-89849008 | MS.gene42290:CDS | 35.0% | |
| TAGAGATATGCAAACTTCCA+TGG | + | chr3.2:89845216-89845235 | MS.gene42290:CDS | 35.0% | |
| TATCTTCTTCTTCTTCTCCT+TGG | + | chr3.2:89844293-89844312 | MS.gene42290:CDS | 35.0% | |
| TATTCATGATTCCTTCCTAC+AGG | + | chr3.2:89847055-89847074 | MS.gene42290:intron | 35.0% | |
| TCAAAAACCAGAGTTCCAAA+TGG | + | chr3.2:89846194-89846213 | MS.gene42290:CDS | 35.0% | |
| TGATCTGAACAACCATCAAT+TGG | - | chr3.2:89845958-89845977 | None:intergenic | 35.0% | |
| TGGAAGTTTGCATATCTCTA+CGG | - | chr3.2:89845216-89845235 | None:intergenic | 35.0% | |
| TGGATTCTGTTGGAAAAGAT+GGG | + | chr3.2:89845884-89845903 | MS.gene42290:CDS | 35.0% | |
| TGTGTGTTTCAATTTGGTTG+TGG | + | chr3.2:89844773-89844792 | MS.gene42290:intron | 35.0% | |
| TTCAGATCAGATACCTGAAA+TGG | + | chr3.2:89845969-89845988 | MS.gene42290:CDS | 35.0% | |
| TTCTTATATGCAGAGAGCTA+TGG | + | chr3.2:89847938-89847957 | MS.gene42290:CDS | 35.0% | |
| TTTAATACTATCGTCGATCG+CGG | + | chr3.2:89844584-89844603 | MS.gene42290:intron | 35.0% | |
| TTTATGCTACCTCATGGTAT+TGG | + | chr3.2:89847298-89847317 | MS.gene42290:intron | 35.0% | |
| ! | ACTTGAAGAGAATTTTCCCA+TGG | + | chr3.2:89845441-89845460 | MS.gene42290:CDS | 35.0% |
| ! | ATTTTTAACATCTTCGCGTG+GGG | - | chr3.2:89846016-89846035 | None:intergenic | 35.0% |
| ! | CCATCATCTGGTAATGATTA+TGG | + | chr3.2:89846402-89846421 | MS.gene42290:CDS | 35.0% |
| ! | GAATCTTTTGAACCATCACA+TGG | - | chr3.2:89845784-89845803 | None:intergenic | 35.0% |
| ! | GATTTTTAACATCTTCGCGT+GGG | - | chr3.2:89846017-89846036 | None:intergenic | 35.0% |
| ! | TCATGGCTAGATTCAACTTT+TGG | + | chr3.2:89847558-89847577 | MS.gene42290:intron | 35.0% |
| ! | TGCATTTTTATGCTACCTCA+TGG | + | chr3.2:89847292-89847311 | MS.gene42290:intron | 35.0% |
| ! | TTCAACTTTTGGATTTGTGG+TGG | + | chr3.2:89847569-89847588 | MS.gene42290:intron | 35.0% |
| !! | AGATGATGGAACTGGTATAT+TGG | - | chr3.2:89846391-89846410 | None:intergenic | 35.0% |
| !! | CTATTTCTGATGGATTCTGT+TGG | + | chr3.2:89845874-89845893 | MS.gene42290:CDS | 35.0% |
| !! | GATGATGGAACTGGTATATT+GGG | - | chr3.2:89846390-89846409 | None:intergenic | 35.0% |
| !! | GTAGATATTGACTTAGGCAA+AGG | + | chr3.2:89848555-89848574 | MS.gene42290:CDS | 35.0% |
| !!! | AGGTATATTGTTTTGGTCCA+TGG | - | chr3.2:89845461-89845480 | None:intergenic | 35.0% |
| !!! | GGTATATTGTTTTGGTCCAT+GGG | - | chr3.2:89845460-89845479 | None:intergenic | 35.0% |
| !!! | TAGTCTAAGGTTGCTTTTCT+TGG | + | chr3.2:89844744-89844763 | MS.gene42290:intron | 35.0% |
| AACTCTACTTCAGCCATTTC+AGG | - | chr3.2:89845985-89846004 | None:intergenic | 40.0% | |
| AATAGCACAGAATTGCACAC+TGG | + | chr3.2:89848951-89848970 | MS.gene42290:CDS | 40.0% | |
| AATCATGATCCGTCACACTA+TGG | + | chr3.2:89845346-89845365 | MS.gene42290:CDS | 40.0% | |
| AATGTCACAATCTAATGGCG+TGG | + | chr3.2:89846164-89846183 | MS.gene42290:CDS | 40.0% | |
| ACAGGTACTTGATATGGACT+TGG | + | chr3.2:89847073-89847092 | MS.gene42290:intron | 40.0% | |
| ACTCTTAAACTTCACTGGTG+AGG | + | chr3.2:89845846-89845865 | MS.gene42290:CDS | 40.0% | |
| ACTTCACCTATTTGAGCAGT+TGG | + | chr3.2:89847326-89847345 | MS.gene42290:intron | 40.0% | |
| AGAAATCATGGCCAACCTAA+TGG | + | chr3.2:89846771-89846790 | MS.gene42290:CDS | 40.0% | |
| AGACAACCATTTCAGGATTC+TGG | + | chr3.2:89844881-89844900 | MS.gene42290:intron | 40.0% | |
| AGACTACCAACTGCTCAAAT+AGG | - | chr3.2:89847335-89847354 | None:intergenic | 40.0% | |
| AGAGACAAGACAACCATTTC+AGG | + | chr3.2:89844874-89844893 | MS.gene42290:intron | 40.0% | |
| AGTCCATATCAAGTACCTGT+AGG | - | chr3.2:89847073-89847092 | None:intergenic | 40.0% | |
| ATAAACCTCAACCTCAACGT+TGG | - | chr3.2:89844347-89844366 | None:intergenic | 40.0% | |
| ATGCTCGAAACCTGTTATAG+AGG | - | chr3.2:89845068-89845087 | None:intergenic | 40.0% | |
| ATTATGGAGATAGAGCTAGC+AGG | + | chr3.2:89846418-89846437 | MS.gene42290:CDS | 40.0% | |
| ATTATTGCTTCCAGTGACCT+AGG | + | chr3.2:89846603-89846622 | MS.gene42290:CDS | 40.0% | |
| ATTCACCTGAGTTAGAGTGT+GGG | + | chr3.2:89845677-89845696 | MS.gene42290:CDS | 40.0% | |
| CAATCTCATATCTAGACGTC+AGG | + | chr3.2:89848587-89848606 | MS.gene42290:CDS | 40.0% | |
| CAATTTGGTTGTGGAATGTC+CGG | + | chr3.2:89844782-89844801 | MS.gene42290:intron | 40.0% | |
| CATATCAAGTACCTGTAGGA+AGG | - | chr3.2:89847069-89847088 | None:intergenic | 40.0% | |
| CCAAAACAATATACCTGAGG+AGG | + | chr3.2:89845465-89845484 | MS.gene42290:CDS | 40.0% | |
| CGGATGAACAGGAAATTGTT+GGG | - | chr3.2:89846350-89846369 | None:intergenic | 40.0% | |
| CTATGACCCTATCGTATCTA+AGG | + | chr3.2:89845033-89845052 | MS.gene42290:CDS | 40.0% | |
| CTGACGTCTAGATATGAGAT+TGG | - | chr3.2:89848589-89848608 | None:intergenic | 40.0% | |
| CTTCCTACAGGTACTTGATA+TGG | + | chr3.2:89847067-89847086 | MS.gene42290:intron | 40.0% | |
| CTTGAGCAAAAGATCATCCT+CGG | - | chr3.2:89844323-89844342 | None:intergenic | 40.0% | |
| GAAACCTGTTATAGAGGAAG+AGG | - | chr3.2:89845062-89845081 | None:intergenic | 40.0% | |
| GAGGATAATGTGCTTCTGAA+TGG | + | chr3.2:89845502-89845521 | MS.gene42290:CDS | 40.0% | |
| GATGAACAGGAAATTGTTGG+GGG | - | chr3.2:89846348-89846367 | None:intergenic | 40.0% | |
| GCCTTTGATGCACATGTTAA+AGG | + | chr3.2:89846102-89846121 | MS.gene42290:CDS | 40.0% | |
| GGACCAAAACAATATACCTG+AGG | + | chr3.2:89845462-89845481 | MS.gene42290:CDS | 40.0% | |
| GGATGAACAGGAAATTGTTG+GGG | - | chr3.2:89846349-89846368 | None:intergenic | 40.0% | |
| GGGTAGGAAAACATCATCAT+TGG | - | chr3.2:89846313-89846332 | None:intergenic | 40.0% | |
| GGTATTACTATTATGTGGCC+AGG | + | chr3.2:89847131-89847150 | MS.gene42290:intron | 40.0% | |
| GTTATCACTTCCTGACATTC+AGG | + | chr3.2:89845720-89845739 | MS.gene42290:CDS | 40.0% | |
| GTTGAACAAAAAAGCTCCGT+AGG | + | chr3.2:89846462-89846481 | MS.gene42290:CDS | 40.0% | |
| TAAACGTACTATAAGGAGGG+GGG | + | chr3.2:89847423-89847442 | MS.gene42290:intron | 40.0% | |
| TATTGAATCGCCGAATTCCT+CGG | - | chr3.2:89845533-89845552 | None:intergenic | 40.0% | |
| TCAACACGAAGAAACTAAGC+GGG | + | chr3.2:89847887-89847906 | MS.gene42290:CDS | 40.0% | |
| TCAACCACCACTAAAATTCC+TGG | - | chr3.2:89847152-89847171 | None:intergenic | 40.0% | |
| TCACATAAGAAACCAGCACT+CGG | + | chr3.2:89846738-89846757 | MS.gene42290:CDS | 40.0% | |
| TCAGGTTTCTTCTCAGACAA+CGG | + | chr3.2:89846488-89846507 | MS.gene42290:CDS | 40.0% | |
| TCATCATTGGATGGAACTTC+CGG | - | chr3.2:89846300-89846319 | None:intergenic | 40.0% | |
| TCCTTGATCTTCACGTTGTT+GGG | + | chr3.2:89848055-89848074 | MS.gene42290:intron | 40.0% | |
| TCCTTGGAAGCAATTGCAAA+AGG | + | chr3.2:89844947-89844966 | MS.gene42290:CDS | 40.0% | |
| TCGGATGAACAGGAAATTGT+TGG | - | chr3.2:89846351-89846370 | None:intergenic | 40.0% | |
| TCTGTTGGAAAAGATGGGAT+TGG | + | chr3.2:89845889-89845908 | MS.gene42290:CDS | 40.0% | |
| TGAGTGGCGACCATATAATA+GGG | - | chr3.2:89847982-89848001 | None:intergenic | 40.0% | |
| TGTTTCAGGCTAGAACCATT+AGG | - | chr3.2:89846789-89846808 | None:intergenic | 40.0% | |
| TTAATACTGTCGTCGTCGAT+CGG | + | chr3.2:89844678-89844697 | MS.gene42290:intron | 40.0% | |
| TTACAGTGAAAGGTTAGACG+AGG | + | chr3.2:89846899-89846918 | MS.gene42290:CDS | 40.0% | |
| TTAGTTGGACGATCAACAGA+AGG | + | chr3.2:89848525-89848544 | MS.gene42290:CDS | 40.0% | |
| TTATTCTGATGTAGAGGCCA+TGG | + | chr3.2:89846959-89846978 | MS.gene42290:CDS | 40.0% | |
| TTCCTTGATCTTCACGTTGT+TGG | + | chr3.2:89848054-89848073 | MS.gene42290:intron | 40.0% | |
| TTGAAGAACTTTGATGGGAG+AGG | - | chr3.2:89845100-89845119 | None:intergenic | 40.0% | |
| TTGAGTGGCGACCATATAAT+AGG | - | chr3.2:89847983-89848002 | None:intergenic | 40.0% | |
| TTGCATCATTGTTTCCACCT+AGG | - | chr3.2:89846623-89846642 | None:intergenic | 40.0% | |
| TTTACGAAGCTAACATCGAC+AGG | - | chr3.2:89846690-89846709 | None:intergenic | 40.0% | |
| ! | ACATCGACAGGTTTTTCCTT+AGG | - | chr3.2:89846678-89846697 | None:intergenic | 40.0% |
| ! | AGATGGTGGTTTACAGTGAA+AGG | + | chr3.2:89846889-89846908 | MS.gene42290:CDS | 40.0% |
| ! | CCTCCTCAGGTATATTGTTT+TGG | - | chr3.2:89845468-89845487 | None:intergenic | 40.0% |
| ! | GGATTTTTAACATCTTCGCG+TGG | - | chr3.2:89846018-89846037 | None:intergenic | 40.0% |
| ! | TATGTGGCCAGGAATTTTAG+TGG | + | chr3.2:89847142-89847161 | MS.gene42290:intron | 40.0% |
| ! | TTGCAGGGTCATTGTTGATT+TGG | - | chr3.2:89845621-89845640 | None:intergenic | 40.0% |
| !! | AAACTAAGCGGGCTATCATA+AGG | + | chr3.2:89847898-89847917 | MS.gene42290:CDS | 40.0% |
| !! | ATCATCCTGCAGGTTTTAGT+TGG | + | chr3.2:89848510-89848529 | MS.gene42290:intron | 40.0% |
| !! | GAGAGGTAAAGTTTTGATGC+AGG | + | chr3.2:89846440-89846459 | MS.gene42290:CDS | 40.0% |
| !! | GATATTGACTTAGGCAAAGG+AGG | + | chr3.2:89848558-89848577 | MS.gene42290:CDS | 40.0% |
| !! | TAATGGTTCTAGCCTGAAAC+AGG | + | chr3.2:89846788-89846807 | MS.gene42290:CDS | 40.0% |
| !! | TAGAGTTCGTGTTGTTTGTC+CGG | - | chr3.2:89844804-89844823 | None:intergenic | 40.0% |
| !! | TCATTACCAGATGATGGAAC+TGG | - | chr3.2:89846399-89846418 | None:intergenic | 40.0% |
| !! | TGAGGAAGAGCTATTTCTGA+TGG | + | chr3.2:89845864-89845883 | MS.gene42290:CDS | 40.0% |
| !!! | GGGTTTTTTAGCAGCTGATT+CGG | - | chr3.2:89846370-89846389 | None:intergenic | 40.0% |
| AAACGTACTATAAGGAGGGG+GGG | + | chr3.2:89847424-89847443 | MS.gene42290:intron | 45.0% | |
| AACTCGGAGCACAAATTTGC+AGG | - | chr3.2:89845637-89845656 | None:intergenic | 45.0% | |
| AAGAAACCAGCACTCGGAAA+TGG | + | chr3.2:89846744-89846763 | MS.gene42290:CDS | 45.0% | |
| AAGTGTGCTCCAATACCATG+AGG | - | chr3.2:89847310-89847329 | None:intergenic | 45.0% | |
| AATGGAACTGCCGAGGAATT+CGG | + | chr3.2:89845520-89845539 | MS.gene42290:CDS | 45.0% | |
| ACAGAAGTAGACGACAATGC+AGG | + | chr3.2:89846054-89846073 | MS.gene42290:CDS | 45.0% | |
| ACTCGGAGCACAAATTTGCA+GGG | - | chr3.2:89845636-89845655 | None:intergenic | 45.0% | |
| AGAAGAAACCTGAGCTCCTA+CGG | - | chr3.2:89846481-89846500 | None:intergenic | 45.0% | |
| AGGCGTCCTTAGATACGATA+GGG | - | chr3.2:89845042-89845061 | None:intergenic | 45.0% | |
| AGTTGCAACATGCTGAAGTG+GGG | + | chr3.2:89846844-89846863 | MS.gene42290:CDS | 45.0% | |
| ATCGTCCAACTAAAACCTGC+AGG | - | chr3.2:89848518-89848537 | None:intergenic | 45.0% | |
| ATTGTTTCCACCTAGGTCAC+TGG | - | chr3.2:89846616-89846635 | None:intergenic | 45.0% | |
| CAGGTTTCTTCTCAGACAAC+GGG | + | chr3.2:89846489-89846508 | MS.gene42290:CDS | 45.0% | |
| CAGTTGCAACATGCTGAAGT+GGG | + | chr3.2:89846843-89846862 | MS.gene42290:CDS | 45.0% | |
| CATCATTGGATGGAACTTCC+GGG | - | chr3.2:89846299-89846318 | None:intergenic | 45.0% | |
| CTCATATCTAGACGTCAGGT+TGG | + | chr3.2:89848591-89848610 | MS.gene42290:intron | 45.0% | |
| GAATTCCCACACTCTAACTC+AGG | - | chr3.2:89845685-89845704 | None:intergenic | 45.0% | |
| GACTGAAACAGAGCTGTTAG+CGG | + | chr3.2:89846080-89846099 | MS.gene42290:CDS | 45.0% | |
| GATGGTTCAAATCATCCTGC+AGG | + | chr3.2:89848500-89848519 | MS.gene42290:intron | 45.0% | |
| GATTCACCTGAGTTAGAGTG+TGG | + | chr3.2:89845676-89845695 | MS.gene42290:CDS | 45.0% | |
| GATTCTATTGCTTGCGAGGA+TGG | + | chr3.2:89845799-89845818 | MS.gene42290:CDS | 45.0% | |
| GGAAATGGCCTCAGAAATCA+TGG | + | chr3.2:89846759-89846778 | MS.gene42290:CDS | 45.0% | |
| GGAGGAACCTCAAATTCATG+AGG | + | chr3.2:89845483-89845502 | MS.gene42290:CDS | 45.0% | |
| GGTAAATAGTTGGGATGCAG+AGG | + | chr3.2:89848790-89848809 | MS.gene42290:intron | 45.0% | |
| GTTCTAGCCTGAAACAGGAA+CGG | + | chr3.2:89846793-89846812 | MS.gene42290:CDS | 45.0% | |
| TATGGCTTCACATGGAGCAT+TGG | + | chr3.2:89847956-89847975 | MS.gene42290:CDS | 45.0% | |
| TCAGGCTAGAACCATTAGGT+TGG | - | chr3.2:89846785-89846804 | None:intergenic | 45.0% | |
| TCAGTTGCAACATGCTGAAG+TGG | + | chr3.2:89846842-89846861 | MS.gene42290:CDS | 45.0% | |
| TCCCAACAACGTGAAGATCA+AGG | - | chr3.2:89848059-89848078 | None:intergenic | 45.0% | |
| TCTGGAAGACCATAGTGTGA+CGG | - | chr3.2:89845358-89845377 | None:intergenic | 45.0% | |
| TCTGTGCGACATGAAACAGA+CGG | - | chr3.2:89846039-89846058 | None:intergenic | 45.0% | |
| TGCTCTACATGCAAGTCCTA+AGG | + | chr3.2:89846659-89846678 | MS.gene42290:CDS | 45.0% | |
| TGTTCTTCTGTTCTCCAGAC+CGG | - | chr3.2:89845751-89845770 | None:intergenic | 45.0% | |
| TTAGAACCACAAACAGGTCC+TGG | - | chr3.2:89846528-89846547 | None:intergenic | 45.0% | |
| TTCTAGCCTGAAACAGGAAC+GGG | + | chr3.2:89846794-89846813 | MS.gene42290:CDS | 45.0% | |
| TTGAGGGTCTTTAGCTGAAG+CGG | - | chr3.2:89846226-89846245 | None:intergenic | 45.0% | |
| TTTGCAGAATGGAGCTTCCT+TGG | + | chr3.2:89844931-89844950 | MS.gene42290:intron | 45.0% | |
| TTTGCTCAAGACCAACGTTG+AGG | + | chr3.2:89844333-89844352 | MS.gene42290:CDS | 45.0% | |
| ! | AGTGGGCCATGCTTTTATGA+TGG | + | chr3.2:89848482-89848501 | MS.gene42290:intron | 45.0% |
| ! | GCCTTTTGCAATTGCTTCCA+AGG | - | chr3.2:89844951-89844970 | None:intergenic | 45.0% |
| ! | GCTGCTCAAACGTTTTACAC+TGG | + | chr3.2:89845406-89845425 | MS.gene42290:CDS | 45.0% |
| ! | GTCCCAAAAGCACAAGTCAA+AGG | - | chr3.2:89847595-89847614 | None:intergenic | 45.0% |
| ! | TAGGTTGGCCATGATTTCTG+AGG | - | chr3.2:89846770-89846789 | None:intergenic | 45.0% |
| ! | TGAATTTGAGGTTCCTCCTC+AGG | - | chr3.2:89845481-89845500 | None:intergenic | 45.0% |
| !! | AGTGCACAGTTTTCAGGCAA+AGG | - | chr3.2:89845298-89845317 | None:intergenic | 45.0% |
| !! | GAGCAGTTGGTAGTCTCTTA+AGG | + | chr3.2:89847339-89847358 | MS.gene42290:intron | 45.0% |
| !! | GGAGCATTGGCCCTATTATA+TGG | + | chr3.2:89847969-89847988 | MS.gene42290:CDS | 45.0% |
| !!! | GGCCTTTGACTTGTGCTTTT+GGG | + | chr3.2:89847590-89847609 | MS.gene42290:intron | 45.0% |
| !!! | TGGCCTTTGACTTGTGCTTT+TGG | + | chr3.2:89847589-89847608 | MS.gene42290:intron | 45.0% |
| AAAAAGCTCCGTAGGAGCTC+AGG | + | chr3.2:89846470-89846489 | MS.gene42290:CDS | 50.0% | |
| AAACAGGTCCTGGAAGGCAA+TGG | - | chr3.2:89846518-89846537 | None:intergenic | 50.0% | |
| AACAGGTCCTGGAAGGCAAT+GGG | - | chr3.2:89846517-89846536 | None:intergenic | 50.0% | |
| AACCACAAACAGGTCCTGGA+AGG | - | chr3.2:89846524-89846543 | None:intergenic | 50.0% | |
| AGATCATCCTCGGAAGTCCA+AGG | - | chr3.2:89844313-89844332 | None:intergenic | 50.0% | |
| ATTGCTTCCAGTGACCTAGG+TGG | + | chr3.2:89846606-89846625 | MS.gene42290:CDS | 50.0% | |
| CAACACAGCATGCCTTACCA+TGG | - | chr3.2:89846979-89846998 | None:intergenic | 50.0% | |
| CAAGACCAACGTTGAGGTTG+AGG | + | chr3.2:89844339-89844358 | MS.gene42290:CDS | 50.0% | |
| CAGAGAGCTATGGCTTCACA+TGG | + | chr3.2:89847948-89847967 | MS.gene42290:CDS | 50.0% | |
| CCTGAAAACTGTGCACTCGA+GGG | + | chr3.2:89845301-89845320 | MS.gene42290:CDS | 50.0% | |
| CTACATCCCGTTCCTGTTTC+AGG | - | chr3.2:89846803-89846822 | None:intergenic | 50.0% | |
| CTGATGTAGAGGCCATGGTA+AGG | + | chr3.2:89846964-89846983 | MS.gene42290:intron | 50.0% | |
| GAACAGGAAATTGTTGGGGG+AGG | - | chr3.2:89846345-89846364 | None:intergenic | 50.0% | |
| GACGCCTCTTCCTCTATAAC+AGG | + | chr3.2:89845055-89845074 | MS.gene42290:CDS | 50.0% | |
| GCTATCATAAGGCTGGAGCA+GGG | + | chr3.2:89847909-89847928 | MS.gene42290:CDS | 50.0% | |
| GGTCTGGAGAACAGAAGAAC+AGG | + | chr3.2:89845750-89845769 | MS.gene42290:CDS | 50.0% | |
| GTTGGGGGAGGCTCATTAAA+GGG | - | chr3.2:89846333-89846352 | None:intergenic | 50.0% | |
| TCCTGACATTCAGGACATGC+CGG | + | chr3.2:89845729-89845748 | MS.gene42290:CDS | 50.0% | |
| TGCTTGCGAGGATGGTTATC+TGG | + | chr3.2:89845807-89845826 | MS.gene42290:CDS | 50.0% | |
| TGTTGGGGGAGGCTCATTAA+AGG | - | chr3.2:89846334-89846353 | None:intergenic | 50.0% | |
| TTCTTCTCCTTGGACTTCCG+AGG | + | chr3.2:89844303-89844322 | MS.gene42290:CDS | 50.0% | |
| ! | GAAGCTGCCATTTGGAACTC+TGG | - | chr3.2:89846204-89846223 | None:intergenic | 50.0% |
| ! | GAGGCGTCCTTAGATACGAT+AGG | - | chr3.2:89845043-89845062 | None:intergenic | 50.0% |
| !! | AGATGTTCTGGGGTCTGAGA+TGG | + | chr3.2:89846872-89846891 | MS.gene42290:CDS | 50.0% |
| !! | AGCAGCTGATTCGGATGAAC+AGG | - | chr3.2:89846361-89846380 | None:intergenic | 50.0% |
| !! | GTGGCCAGGAATTTTAGTGG+TGG | + | chr3.2:89847145-89847164 | MS.gene42290:intron | 50.0% |
| !! | TAAGCGGGCTATCATAAGGC+TGG | + | chr3.2:89847902-89847921 | MS.gene42290:CDS | 50.0% |
| ACATTCAGGACATGCCGGTC+TGG | + | chr3.2:89845734-89845753 | MS.gene42290:CDS | 55.0% | |
| ACCGGCATGTCCTGAATGTC+AGG | - | chr3.2:89845733-89845752 | None:intergenic | 55.0% | |
| CTCAGACCCCAGAACATCTG+CGG | - | chr3.2:89846871-89846890 | None:intergenic | 55.0% | |
| CTGAAGCGGAAGCTGCCATT+TGG | - | chr3.2:89846212-89846231 | None:intergenic | 55.0% | |
| GCCTGAAAACTGTGCACTCG+AGG | + | chr3.2:89845300-89845319 | MS.gene42290:CDS | 55.0% | |
| GCTTCTGAATGGAACTGCCG+AGG | + | chr3.2:89845513-89845532 | MS.gene42290:CDS | 55.0% | |
| GGAGATAGAGCTAGCAGGAG+AGG | + | chr3.2:89846423-89846442 | MS.gene42290:CDS | 55.0% | |
| GGCTATCATAAGGCTGGAGC+AGG | + | chr3.2:89847908-89847927 | MS.gene42290:CDS | 55.0% | |
| GGGGAGGCTCATTAAAGGGT+AGG | - | chr3.2:89846329-89846348 | None:intergenic | 55.0% | |
| TGCCTTCCAGGACCTGTTTG+TGG | + | chr3.2:89846519-89846538 | MS.gene42290:CDS | 55.0% | |
| ! | CCCTCGAGTGCACAGTTTTC+AGG | - | chr3.2:89845304-89845323 | None:intergenic | 55.0% |
| !! | TGTTCTGGGGTCTGAGATGG+TGG | + | chr3.2:89846875-89846894 | MS.gene42290:CDS | 55.0% |
| AGTGGGGTCCGCAGATGTTC+TGG | + | chr3.2:89846860-89846879 | MS.gene42290:CDS | 60.0% | |
| CTGAGGCCATTTCCGAGTGC+TGG | - | chr3.2:89846753-89846772 | None:intergenic | 60.0% | |
| GTGGGGTCCGCAGATGTTCT+GGG | + | chr3.2:89846861-89846880 | MS.gene42290:CDS | 60.0% | |
| TGGGGTCCGCAGATGTTCTG+GGG | + | chr3.2:89846862-89846881 | MS.gene42290:CDS | 60.0% | |
| ACGGGAGCCCATTGCCTTCC+AGG | + | chr3.2:89846507-89846526 | MS.gene42290:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89844274 | 89849016 | 89844274 | ID=MS.gene42290 |
| chr3.2 | mRNA | 89844274 | 89849016 | 89844274 | ID=MS.gene42290.t1;Parent=MS.gene42290 |
| chr3.2 | exon | 89844274 | 89844360 | 89844274 | ID=MS.gene42290.t1.exon1;Parent=MS.gene42290.t1 |
| chr3.2 | CDS | 89844274 | 89844360 | 89844274 | ID=cds.MS.gene42290.t1;Parent=MS.gene42290.t1 |
| chr3.2 | exon | 89844938 | 89846980 | 89844938 | ID=MS.gene42290.t1.exon2;Parent=MS.gene42290.t1 |
| chr3.2 | CDS | 89844938 | 89846980 | 89844938 | ID=cds.MS.gene42290.t1;Parent=MS.gene42290.t1 |
| chr3.2 | exon | 89847077 | 89847131 | 89847077 | ID=MS.gene42290.t1.exon3;Parent=MS.gene42290.t1 |
| chr3.2 | CDS | 89847077 | 89847131 | 89847077 | ID=cds.MS.gene42290.t1;Parent=MS.gene42290.t1 |
| chr3.2 | exon | 89847877 | 89848025 | 89847877 | ID=MS.gene42290.t1.exon4;Parent=MS.gene42290.t1 |
| chr3.2 | CDS | 89847877 | 89848025 | 89847877 | ID=cds.MS.gene42290.t1;Parent=MS.gene42290.t1 |
| chr3.2 | exon | 89848522 | 89848608 | 89848522 | ID=MS.gene42290.t1.exon5;Parent=MS.gene42290.t1 |
| chr3.2 | CDS | 89848522 | 89848608 | 89848522 | ID=cds.MS.gene42290.t1;Parent=MS.gene42290.t1 |
| chr3.2 | exon | 89848882 | 89849016 | 89848882 | ID=MS.gene42290.t1.exon6;Parent=MS.gene42290.t1 |
| chr3.2 | CDS | 89848882 | 89849016 | 89848882 | ID=cds.MS.gene42290.t1;Parent=MS.gene42290.t1 |
| Gene Sequence |
| Protein sequence |
