Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054851.t1 | KEH23588.1 | 85.4 | 556 | 2 | 1 | 1 | 477 | 21 | 576 | 3.30E-239 | 837.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054851.t1 | Q0IQA5 | 62.2 | 529 | 136 | 8 | 1 | 474 | 21 | 540 | 6.6e-164 | 578.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054851.t1 | A0A072U367 | 85.4 | 556 | 2 | 1 | 1 | 477 | 21 | 576 | 2.4e-239 | 837.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050170 | MS.gene054851 | -0.829907 | 3.96E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene054851 | -0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene054851 | -0.805096 | 1.57E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene054851 | -0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene055616 | 0.808553 | 2.93E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene05589 | -0.809498 | 1.84E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene057367 | 0.81141 | 7.10E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene059103 | 0.818106 | 2.33E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene059480 | 0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene05996 | -0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene061360 | -0.805921 | 1.06E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene064396 | -0.83609 | 1.15E-56 | -1.69E-46 |
| MS.gene054851 | MS.gene064707 | -0.809163 | 2.17E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene065675 | -0.823107 | 1.65E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene066003 | -0.80202 | 6.84E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene066030 | -0.833322 | 5.70E-56 | -1.69E-46 |
| MS.gene054851 | MS.gene066358 | 0.831583 | 1.54E-55 | -1.69E-46 |
| MS.gene054851 | MS.gene066359 | 0.836563 | 8.70E-57 | -1.69E-46 |
| MS.gene054851 | MS.gene066534 | 0.811341 | 7.35E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene067376 | 0.832787 | 7.74E-56 | -1.69E-46 |
| MS.gene054851 | MS.gene068820 | -0.822992 | 1.76E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene069120 | 0.809117 | 2.22E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene069855 | -0.823947 | 1.05E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene071422 | 0.81459 | 1.43E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene072496 | -0.807025 | 6.18E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene073059 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene073062 | 0.810762 | 9.81E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene074291 | -0.805457 | 1.32E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene074380 | -0.811523 | 6.71E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene09072 | 0.803506 | 3.37E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene09795 | -0.833866 | 4.17E-56 | -1.69E-46 |
| MS.gene054851 | MS.gene09797 | -0.813651 | 2.30E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene09798 | -0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene20813 | -0.82324 | 1.54E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene20816 | -0.817252 | 3.63E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene20932 | -0.80057 | 1.35E-48 | -1.69E-46 |
| MS.gene054851 | MS.gene23115 | -0.815485 | 9.03E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene24857 | -0.801898 | 7.24E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene27981 | -0.820231 | 7.65E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene33980 | 0.812018 | 5.23E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene34038 | -0.825529 | 4.46E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene35812 | -0.818831 | 1.60E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene36337 | -0.824306 | 8.67E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene38118 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene054851 | MS.gene39911 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene42290 | 0.810114 | 1.35E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene42301 | -0.807887 | 4.06E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene44439 | -0.835027 | 2.13E-56 | -1.69E-46 |
| MS.gene054851 | MS.gene44440 | -0.818104 | 2.33E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene45607 | -0.84213 | 3.12E-58 | -1.69E-46 |
| MS.gene054851 | MS.gene47989 | -0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene49762 | 0.806165 | 9.39E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene50576 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene51887 | -0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene52976 | -0.827475 | 1.53E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene55771 | 0.814294 | 1.66E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene57344 | -0.807988 | 3.86E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene57602 | -0.819713 | 1.01E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene58165 | -0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene58466 | -0.803555 | 3.30E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene58848 | 0.874389 | 7.02E-68 | -1.69E-46 |
| MS.gene054851 | MS.gene59657 | -0.832705 | 8.12E-56 | -1.69E-46 |
| MS.gene054851 | MS.gene60176 | -0.839506 | 1.52E-57 | -1.69E-46 |
| MS.gene054851 | MS.gene60177 | -0.838641 | 2.55E-57 | -1.69E-46 |
| MS.gene054851 | MS.gene60269 | 0.819921 | 9.01E-53 | -1.69E-46 |
| MS.gene054851 | MS.gene60712 | -0.815546 | 8.74E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene61144 | -0.841646 | 4.19E-58 | -1.69E-46 |
| MS.gene054851 | MS.gene61145 | -0.838772 | 2.36E-57 | -1.69E-46 |
| MS.gene054851 | MS.gene61919 | -0.813508 | 2.47E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene65675 | -0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene054851 | MS.gene65986 | 0.809847 | 1.55E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene69450 | -0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene70123 | 0.813007 | 3.18E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene70306 | -0.815182 | 1.05E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene71182 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene71420 | -0.825615 | 4.26E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene73544 | -0.807633 | 4.60E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene73545 | -0.824866 | 6.40E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene75915 | 0.814285 | 1.67E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene75918 | 0.807644 | 4.57E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene76418 | -0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene76521 | -0.828842 | 7.18E-55 | -1.69E-46 |
| MS.gene054851 | MS.gene77595 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene054851 | MS.gene78325 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene78942 | -0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene85136 | -0.82659 | 2.50E-54 | -1.69E-46 |
| MS.gene054851 | MS.gene86293 | -0.801064 | 1.07E-48 | -1.69E-46 |
| MS.gene054851 | MS.gene88896 | -0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene91075 | 0.806278 | 8.89E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene91392 | -0.808436 | 3.10E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene96549 | -0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene054851 | MS.gene97422 | -0.807497 | 4.91E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene97437 | 0.810061 | 1.39E-50 | -1.69E-46 |
| MS.gene054851 | MS.gene97726 | -0.817078 | 3.97E-52 | -1.69E-46 |
| MS.gene054851 | MS.gene98750 | -0.801883 | 7.30E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054851.t1 | MTR_7g089360 | 77.878 | 556 | 44 | 6 | 1 | 477 | 21 | 576 | 0.0 | 817 |
| MS.gene054851.t1 | MTR_7g089360 | 75.540 | 556 | 57 | 5 | 1 | 477 | 21 | 576 | 0.0 | 786 |
| MS.gene054851.t1 | MTR_8g107360 | 66.934 | 499 | 127 | 10 | 1 | 474 | 21 | 506 | 0.0 | 636 |
| MS.gene054851.t1 | MTR_4g127090 | 56.506 | 538 | 167 | 8 | 1 | 477 | 21 | 552 | 0.0 | 557 |
| MS.gene054851.t1 | MTR_1g029190 | 53.360 | 506 | 187 | 12 | 1 | 474 | 21 | 509 | 1.17e-156 | 455 |
| MS.gene054851.t1 | MTR_6g069510 | 79.008 | 262 | 49 | 2 | 1 | 262 | 21 | 276 | 1.31e-146 | 432 |
| MS.gene054851.t1 | MTR_6g069510 | 57.500 | 280 | 90 | 6 | 201 | 474 | 330 | 586 | 8.66e-88 | 281 |
| MS.gene054851.t1 | MTR_4g084870 | 73.664 | 262 | 53 | 2 | 1 | 262 | 21 | 266 | 2.64e-133 | 400 |
| MS.gene054851.t1 | MTR_4g084870 | 70.093 | 214 | 52 | 3 | 270 | 477 | 437 | 644 | 7.52e-86 | 277 |
| MS.gene054851.t1 | MTR_2g038470 | 43.381 | 491 | 235 | 11 | 1 | 471 | 21 | 488 | 9.37e-128 | 381 |
| MS.gene054851.t1 | MTR_4g127100 | 71.042 | 259 | 68 | 4 | 1 | 257 | 21 | 274 | 3.40e-124 | 373 |
| MS.gene054851.t1 | MTR_4g127100 | 78.049 | 82 | 18 | 0 | 314 | 395 | 447 | 528 | 2.00e-32 | 130 |
| MS.gene054851.t1 | MTR_1g030890 | 60.121 | 331 | 104 | 6 | 1 | 322 | 21 | 332 | 6.31e-124 | 371 |
| MS.gene054851.t1 | MTR_1g030890 | 62.687 | 134 | 38 | 4 | 266 | 393 | 395 | 522 | 6.94e-40 | 150 |
| MS.gene054851.t1 | MTR_4g127100 | 71.042 | 259 | 68 | 4 | 1 | 257 | 21 | 274 | 7.97e-124 | 374 |
| MS.gene054851.t1 | MTR_4g127100 | 77.439 | 164 | 37 | 0 | 314 | 477 | 447 | 610 | 3.63e-80 | 261 |
| MS.gene054851.t1 | MTR_1g030890 | 60.121 | 331 | 104 | 6 | 1 | 322 | 21 | 332 | 9.01e-124 | 374 |
| MS.gene054851.t1 | MTR_1g030890 | 70.698 | 215 | 51 | 4 | 266 | 474 | 395 | 603 | 6.37e-91 | 289 |
| MS.gene054851.t1 | MTR_6g011400 | 54.971 | 171 | 68 | 3 | 304 | 471 | 176 | 340 | 2.26e-52 | 181 |
| MS.gene054851.t1 | MTR_6g011400 | 57.971 | 138 | 57 | 1 | 1 | 137 | 21 | 158 | 1.07e-45 | 163 |
| MS.gene054851.t1 | MTR_7g009370 | 63.504 | 137 | 50 | 0 | 335 | 471 | 200 | 336 | 3.28e-52 | 180 |
| MS.gene054851.t1 | MTR_7g009370 | 57.246 | 138 | 59 | 0 | 1 | 138 | 21 | 158 | 3.08e-47 | 167 |
| MS.gene054851.t1 | MTR_7g079720 | 49.359 | 156 | 74 | 1 | 319 | 474 | 193 | 343 | 1.02e-46 | 166 |
| MS.gene054851.t1 | MTR_7g079720 | 44.633 | 177 | 86 | 2 | 1 | 174 | 21 | 188 | 2.50e-42 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054851.t1 | AT1G23080 | 54.915 | 590 | 147 | 9 | 1 | 477 | 21 | 604 | 0.0 | 572 |
| MS.gene054851.t1 | AT2G01420 | 52.668 | 581 | 167 | 7 | 1 | 477 | 21 | 597 | 0.0 | 548 |
| MS.gene054851.t1 | AT1G23080 | 52.749 | 582 | 168 | 10 | 1 | 477 | 21 | 600 | 0.0 | 534 |
| MS.gene054851.t1 | AT1G23080 | 52.749 | 582 | 168 | 10 | 1 | 477 | 21 | 600 | 0.0 | 534 |
| MS.gene054851.t1 | AT1G77110 | 49.442 | 538 | 194 | 12 | 1 | 470 | 21 | 548 | 1.01e-159 | 464 |
| MS.gene054851.t1 | AT1G77110 | 49.442 | 538 | 194 | 12 | 1 | 470 | 21 | 548 | 2.00e-159 | 464 |
| MS.gene054851.t1 | AT1G73590 | 75.445 | 281 | 60 | 3 | 1 | 277 | 21 | 296 | 3.33e-147 | 434 |
| MS.gene054851.t1 | AT1G73590 | 57.613 | 243 | 83 | 3 | 235 | 477 | 385 | 607 | 4.88e-76 | 250 |
| MS.gene054851.t1 | AT5G57090 | 73.462 | 260 | 65 | 3 | 1 | 257 | 21 | 279 | 7.58e-128 | 385 |
| MS.gene054851.t1 | AT5G57090 | 73.224 | 183 | 42 | 2 | 295 | 477 | 457 | 632 | 1.28e-80 | 263 |
| MS.gene054851.t1 | AT1G23080 | 60.059 | 338 | 98 | 5 | 1 | 311 | 21 | 348 | 4.01e-127 | 380 |
| MS.gene054851.t1 | AT1G23080 | 63.636 | 121 | 35 | 3 | 275 | 393 | 403 | 516 | 4.30e-37 | 143 |
| MS.gene054851.t1 | AT1G70940 | 66.187 | 278 | 63 | 3 | 1 | 260 | 21 | 285 | 9.27e-122 | 370 |
| MS.gene054851.t1 | AT1G70940 | 68.627 | 204 | 61 | 2 | 277 | 477 | 422 | 625 | 8.32e-80 | 261 |
| MS.gene054851.t1 | AT2G01420 | 62.543 | 291 | 70 | 4 | 1 | 273 | 21 | 290 | 4.47e-121 | 364 |
| MS.gene054851.t1 | AT2G01420 | 67.647 | 102 | 33 | 0 | 292 | 393 | 416 | 517 | 4.34e-35 | 137 |
| MS.gene054851.t1 | AT2G01420 | 62.543 | 291 | 70 | 4 | 1 | 273 | 21 | 290 | 1.93e-120 | 365 |
| MS.gene054851.t1 | AT2G01420 | 72.678 | 183 | 50 | 0 | 292 | 474 | 416 | 598 | 8.29e-83 | 268 |
| MS.gene054851.t1 | AT5G57090 | 73.224 | 183 | 42 | 2 | 295 | 477 | 357 | 532 | 3.72e-82 | 264 |
| MS.gene054851.t1 | AT5G57090 | 71.508 | 179 | 47 | 3 | 82 | 257 | 2 | 179 | 2.23e-75 | 246 |
| MS.gene054851.t1 | AT5G15100 | 58.108 | 148 | 58 | 2 | 329 | 474 | 204 | 349 | 2.91e-49 | 173 |
| MS.gene054851.t1 | AT5G15100 | 48.966 | 145 | 69 | 2 | 1 | 140 | 21 | 165 | 3.49e-37 | 140 |
| MS.gene054851.t1 | AT5G16530 | 55.474 | 137 | 61 | 0 | 1 | 137 | 21 | 157 | 9.28e-47 | 165 |
| MS.gene054851.t1 | AT5G16530 | 49.635 | 137 | 69 | 0 | 335 | 471 | 192 | 328 | 6.37e-43 | 155 |
| MS.gene054851.t1 | AT5G16530 | 55.474 | 137 | 61 | 0 | 1 | 137 | 21 | 157 | 1.58e-46 | 165 |
| MS.gene054851.t1 | AT5G16530 | 49.286 | 140 | 71 | 0 | 335 | 474 | 192 | 331 | 7.61e-43 | 155 |
Find 105 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACTTATTCCAGCCTTAT+TGG | 0.181814 | 7.3:-20176580 | MS.gene054851:CDS |
| ATGGGCATTCCTTTGTTAAA+AGG | 0.199123 | 7.3:-20177879 | MS.gene054851:CDS |
| ACAATCTAACTTTGGAAGTT+TGG | 0.214287 | 7.3:-20177397 | MS.gene054851:CDS |
| TGATTCTGATGTTCTTTCTT+TGG | 0.227098 | 7.3:-20177694 | MS.gene054851:CDS |
| TCACCTTGAGATCCATCTTT+AGG | 0.278081 | 7.3:+20176688 | None:intergenic |
| CTTGGTCTCTGGTCTCATTC+AGG | 0.279146 | 7.3:-20176552 | MS.gene054851:intron |
| TGTTTAGATTATGAAGAATT+TGG | 0.285042 | 7.3:-20176814 | MS.gene054851:intron |
| ACTTCCTAACACACTTGTTA+TGG | 0.291583 | 7.3:-20177898 | MS.gene054851:CDS |
| TTGCCTATGGTTCAGTAAAA+TGG | 0.320764 | 7.3:-20178157 | MS.gene054851:CDS |
| CAATCTAACTTTGGAAGTTT+GGG | 0.322747 | 7.3:-20177396 | MS.gene054851:CDS |
| ATGGCGGTTCGCTTCCTTAC+CGG | 0.323278 | 7.3:-20176196 | MS.gene054851:CDS |
| ATAAGGCTGGAATAAGTATT+AGG | 0.334056 | 7.3:+20176583 | None:intergenic |
| CTTCCTAACACACTTGTTAT+GGG | 0.334368 | 7.3:-20177897 | MS.gene054851:CDS |
| TGTGTTTGTAGGGTTGTTCA+TGG | 0.338528 | 7.3:-20176269 | MS.gene054851:intron |
| AGGGGTGCTAGGATTCTTAT+TGG | 0.354814 | 7.3:-20177762 | MS.gene054851:CDS |
| CATCCTGACATTCTTAGCAC+TGG | 0.357420 | 7.3:-20175952 | MS.gene054851:CDS |
| TGATGATTCTGGTACCCTTA+TGG | 0.365955 | 7.3:-20177847 | MS.gene054851:CDS |
| ATAATAGAACCAGCAGTATC+AGG | 0.369629 | 7.3:+20177729 | None:intergenic |
| TATTGGTCTCACTTGGTCTC+TGG | 0.371342 | 7.3:-20176563 | MS.gene054851:CDS |
| TGGTGTGGAGAAAATTGATT+AGG | 0.395528 | 7.3:-20176609 | MS.gene054851:CDS |
| GGTCATGATGAGTTTAGCTT+TGG | 0.397565 | 7.3:-20176793 | MS.gene054851:CDS |
| GAACAACTATTTGAACCATA+AGG | 0.399773 | 7.3:+20177832 | None:intergenic |
| TTGTTCTTCAATGTATCATT+TGG | 0.400322 | 7.3:-20177815 | MS.gene054851:CDS |
| CTTCATTTGTTGTAGGACTC+AGG | 0.401999 | 7.3:-20176153 | MS.gene054851:CDS |
| CCAGCCTTATTGGTCTCACT+TGG | 0.410761 | 7.3:-20176570 | MS.gene054851:CDS |
| CTAGCAGGTGGCATGTTTGT+TGG | 0.412896 | 7.3:+20176658 | None:intergenic |
| ACCAAATGAAAAGGAGTGTT+AGG | 0.421071 | 7.3:+20177979 | None:intergenic |
| GATTGTTGGTTGAGATGAAA+TGG | 0.423710 | 7.3:+20178057 | None:intergenic |
| CACAAAAGGGACTATTCCTT+GGG | 0.427167 | 7.3:+20175996 | None:intergenic |
| CCTTTGTTAAAAGGAATGTA+TGG | 0.427200 | 7.3:-20177870 | MS.gene054851:CDS |
| ATGCCCATAACAAGTGTGTT+AGG | 0.427285 | 7.3:+20177894 | None:intergenic |
| TGCTATGAACCTGTAGTTCA+TGG | 0.428807 | 7.3:+20178028 | None:intergenic |
| ACACAAAAGGGACTATTCCT+TGG | 0.429505 | 7.3:+20175995 | None:intergenic |
| GTTCATGGTGTAAGGATTGT+TGG | 0.430026 | 7.3:+20178043 | None:intergenic |
| TATTCCTTGGCAAACACAAA+AGG | 0.430791 | 7.3:+20175982 | None:intergenic |
| TTCACACCAGATCAATGTTC+AGG | 0.436198 | 7.3:-20178125 | MS.gene054851:CDS |
| TCTGATGTTCTTTCTTTGGA+TGG | 0.440284 | 7.3:-20177690 | MS.gene054851:CDS |
| GGAAATAGAACTGTTGCTAA+TGG | 0.443765 | 7.3:-20176772 | MS.gene054851:CDS |
| TTCATTTGTTGTAGGACTCA+GGG | 0.446337 | 7.3:-20176152 | MS.gene054851:CDS |
| GGAATGTATGGTGATGATTC+TGG | 0.447363 | 7.3:-20177858 | MS.gene054851:CDS |
| TTAGAAAATCAACTAGTTCA+AGG | 0.451046 | 7.3:-20177608 | MS.gene054851:CDS |
| TTAGTCAAATTAGAAGGTCT+TGG | 0.455629 | 7.3:+20177531 | None:intergenic |
| AACTAGACCCTCTTGGTGTA+GGG | 0.459669 | 7.3:+20177475 | None:intergenic |
| CCTTACCGGTCCTGCTGTCA+TGG | 0.467833 | 7.3:-20176182 | MS.gene054851:CDS |
| AACCCAGTGCTAAGAATGTC+AGG | 0.470683 | 7.3:+20175949 | None:intergenic |
| AGGATGAACATTGTATTCCT+TGG | 0.470964 | 7.3:+20175969 | None:intergenic |
| GAGACCAAGTGAGACCAATA+AGG | 0.471591 | 7.3:+20176566 | None:intergenic |
| ATCTGATGCTGGCCTTGGAA+TGG | 0.472884 | 7.3:-20176405 | MS.gene054851:CDS |
| TCAGCATTAGTCAAATTAGA+AGG | 0.474445 | 7.3:+20177525 | None:intergenic |
| GTTGCACATTGCCATTGTAC+AGG | 0.482101 | 7.3:-20176122 | MS.gene054851:intron |
| TGTTCATGGCATTGCAGCCA+AGG | 0.483477 | 7.3:-20176255 | MS.gene054851:CDS |
| TCCTACAACAAATGAAGAAA+AGG | 0.484743 | 7.3:+20176159 | None:intergenic |
| AACCTGTAGTTCATGGTGTA+AGG | 0.485438 | 7.3:+20178035 | None:intergenic |
| AGTTGAGCTTGAACCAAGCT+TGG | 0.485871 | 7.3:+20176723 | None:intergenic |
| AAACTAGACCCTCTTGGTGT+AGG | 0.488328 | 7.3:+20177474 | None:intergenic |
| AGTCCTAGACAATCTAACTT+TGG | 0.491310 | 7.3:-20177405 | MS.gene054851:CDS |
| TGTTTGAATATAGGGGTGCT+AGG | 0.492266 | 7.3:-20177773 | MS.gene054851:CDS |
| GGAATGGCTATGTTTAGCCT+TGG | 0.492947 | 7.3:-20176389 | MS.gene054851:intron |
| TTTGACGAGGAAAGTGGTGT+TGG | 0.498912 | 7.3:-20177372 | MS.gene054851:intron |
| AACAACTATTTGAACCATAA+GGG | 0.503075 | 7.3:+20177833 | None:intergenic |
| CTTCAAACTGAAGCTGAAGT+TGG | 0.503605 | 7.3:-20177657 | MS.gene054851:CDS |
| ATCCTGACATTCTTAGCACT+GGG | 0.504317 | 7.3:-20175951 | MS.gene054851:CDS |
| GAACAGTTTCCTGATACTGC+TGG | 0.507669 | 7.3:-20177738 | MS.gene054851:CDS |
| GAAGCTGAAGTTGGTGAAGA+TGG | 0.512229 | 7.3:-20177648 | MS.gene054851:CDS |
| TTGTTCTTGACCAAATGAAA+AGG | 0.512300 | 7.3:+20177970 | None:intergenic |
| ATAGATTTAGCAACAATAGC+AGG | 0.513839 | 7.3:+20176437 | None:intergenic |
| ATCCTTACACCATGAACTAC+AGG | 0.514520 | 7.3:-20178037 | MS.gene054851:CDS |
| TTTCCACAAGCAATAATCCT+TGG | 0.514930 | 7.3:+20176238 | None:intergenic |
| GAAGAAAAGGCCATGACAGC+AGG | 0.516677 | 7.3:+20176172 | None:intergenic |
| ATTCCTTGGCAAACACAAAA+GGG | 0.516904 | 7.3:+20175983 | None:intergenic |
| CTTCCAAAGTTAGATTGTCT+AGG | 0.518838 | 7.3:+20177402 | None:intergenic |
| ACTGAGCTTCATCCTAAAGA+TGG | 0.519195 | 7.3:-20176700 | MS.gene054851:CDS |
| CACCGTGGCTTCTTTCGCGA+TGG | 0.519566 | 7.3:-20176215 | MS.gene054851:CDS |
| AGTACTGTAGTAATCAATAG+AGG | 0.524420 | 7.3:+20175914 | None:intergenic |
| AGTCTTGTCATAACACTAGC+AGG | 0.534534 | 7.3:+20176643 | None:intergenic |
| CAGCCAAGGATTATTGCTTG+TGG | 0.537610 | 7.3:-20176241 | MS.gene054851:CDS |
| TTCTAGGCTGCTCTTCCCCA+AGG | 0.538712 | 7.3:-20176012 | MS.gene054851:intron |
| TTTATGCCTGAACATTGATC+TGG | 0.540677 | 7.3:+20178119 | None:intergenic |
| CCATGACAGCAGGACCGGTA+AGG | 0.542644 | 7.3:+20176182 | None:intergenic |
| ACTTCAGCTTCAGTTTGAAG+TGG | 0.543240 | 7.3:+20177660 | None:intergenic |
| CCAAGTGAGACCAATAAGGC+TGG | 0.548167 | 7.3:+20176570 | None:intergenic |
| GCTCAAGAGGGTCATTAGAA+TGG | 0.548285 | 7.3:-20177947 | MS.gene054851:CDS |
| AAAGGCCATGACAGCAGGAC+CGG | 0.549483 | 7.3:+20176177 | None:intergenic |
| AGGTCTCATGGTGTTAACTC+TGG | 0.551683 | 7.3:-20177567 | MS.gene054851:CDS |
| TGATTAAAACTAGACCCTCT+TGG | 0.555019 | 7.3:+20177468 | None:intergenic |
| CATCCTAAAGATGGATCTCA+AGG | 0.565411 | 7.3:-20176691 | MS.gene054851:CDS |
| GAACCAAGCTTGGATAGCAC+TGG | 0.569514 | 7.3:+20176733 | None:intergenic |
| CGTGGCTTCTTTCGCGATGG+CGG | 0.570214 | 7.3:-20176212 | MS.gene054851:CDS |
| ATTGGTTATAACCTGTACAA+TGG | 0.572648 | 7.3:+20176111 | None:intergenic |
| GTAGCGATGATCCTTGCCTA+TGG | 0.573429 | 7.3:-20178170 | None:intergenic |
| TGGTCAAGAACAAGCTCAAG+AGG | 0.574049 | 7.3:-20177960 | MS.gene054851:CDS |
| GGACCAGTGCTATCCAAGCT+TGG | 0.577529 | 7.3:-20176736 | MS.gene054851:CDS |
| TCATTTGTTGTAGGACTCAG+GGG | 0.591968 | 7.3:-20176151 | MS.gene054851:CDS |
| GGCTAAACATAGCCATTCCA+AGG | 0.592408 | 7.3:+20176393 | None:intergenic |
| CCTATGGTTCAGTAAAATGG+TGG | 0.592418 | 7.3:-20178154 | MS.gene054851:CDS |
| CGCCATCGCGAAAGAAGCCA+CGG | 0.602557 | 7.3:+20176213 | None:intergenic |
| GCTAATGGTGTGGACAAAGA+AGG | 0.627258 | 7.3:-20176757 | MS.gene054851:CDS |
| TAGAACTGTTGCTAATGGTG+TGG | 0.630238 | 7.3:-20176767 | MS.gene054851:CDS |
| TCTAGAAACCCTACACCAAG+AGG | 0.643094 | 7.3:-20177483 | MS.gene054851:CDS |
| ATGAAATGGAATGAGAGTAG+TGG | 0.649871 | 7.3:+20178071 | None:intergenic |
| GGTCAAGAACAAGCTCAAGA+GGG | 0.670875 | 7.3:-20177959 | MS.gene054851:CDS |
| CTAGAAACCCTACACCAAGA+GGG | 0.673115 | 7.3:-20177482 | MS.gene054851:CDS |
| TATTGCTTGTGGAAACACCG+TGG | 0.721408 | 7.3:-20176230 | MS.gene054851:CDS |
| ACAAAAGGGACTATTCCTTG+GGG | 0.727306 | 7.3:+20175997 | None:intergenic |
| CTTGTCATAACACTAGCAGG+TGG | 0.727524 | 7.3:+20176646 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAATAAAATATACCA+AGG | + | chr7.3:20177722-20177741 | None:intergenic | 10.0% |
| !! | ACATATATTCAATAAATCAA+TGG | + | chr7.3:20178046-20178065 | None:intergenic | 15.0% |
| !!! | TTTTACTCATGTTTTTTAAA+TGG | - | chr7.3:20177221-20177240 | MS.gene054851:intron | 15.0% |
| !! | AATGTTATAACCTTAACAAT+AGG | + | chr7.3:20177779-20177798 | None:intergenic | 20.0% |
| !! | CATTAAAATGAATAAGCTTA+TGG | + | chr7.3:20177753-20177772 | None:intergenic | 20.0% |
| !! | CTAAACAAATCAACAATTAA+AGG | + | chr7.3:20177264-20177283 | None:intergenic | 20.0% |
| !! | TGTTTAGATTATGAAGAATT+TGG | - | chr7.3:20177277-20177296 | MS.gene054851:intron | 20.0% |
| !! | TTTAATGTTTCCTATTGTTA+AGG | - | chr7.3:20177766-20177785 | MS.gene054851:CDS | 20.0% |
| !!! | ATAACATTGTTATGATTTTG+TGG | - | chr7.3:20177791-20177810 | MS.gene054851:CDS | 20.0% |
| !!! | GTTGTTTTTGTTTGAATATA+GGG | - | chr7.3:20176310-20176329 | MS.gene054851:intron | 20.0% |
| !!! | TAATGTTTTTGGATTTTTTG+TGG | - | chr7.3:20177022-20177041 | MS.gene054851:intron | 20.0% |
| !!! | TCATACTGATTTTTATTCTA+TGG | - | chr7.3:20176643-20176662 | MS.gene054851:CDS | 20.0% |
| !!! | TGTTGTTTTTGTTTGAATAT+AGG | - | chr7.3:20176309-20176328 | MS.gene054851:intron | 20.0% |
| !!! | TTGTTTTTGTTTGAATATAG+GGG | - | chr7.3:20176311-20176330 | MS.gene054851:intron | 20.0% |
| !!! | TTTTATTCTATGGTGAATAA+TGG | - | chr7.3:20176653-20176672 | MS.gene054851:CDS | 20.0% |
| ! | AACAACTATTTGAACCATAA+GGG | + | chr7.3:20176261-20176280 | None:intergenic | 25.0% |
| ! | AACATTAACCAAAAGTCAAA+AGG | + | chr7.3:20177009-20177028 | None:intergenic | 25.0% |
| ! | ACATTAACCAAAAGTCAAAA+GGG | + | chr7.3:20177008-20177027 | None:intergenic | 25.0% |
| ! | ATGAAAAAATAGTGAACTTC+TGG | + | chr7.3:20178014-20178033 | None:intergenic | 25.0% |
| ! | TTAGAAAATCAACTAGTTCA+AGG | - | chr7.3:20176483-20176502 | MS.gene054851:intron | 25.0% |
| ! | TTGTTCTTCAATGTATCATT+TGG | - | chr7.3:20176276-20176295 | MS.gene054851:intron | 25.0% |
| !! | GTCAAAAAACAAAACCTTTT+TGG | + | chr7.3:20176973-20176992 | None:intergenic | 25.0% |
| !! | TTTTTGGATTTTTTGTGGTT+TGG | - | chr7.3:20177027-20177046 | MS.gene054851:intron | 25.0% |
| !!! | AATCTTTCATATTGTTTTGC+AGG | - | chr7.3:20177616-20177635 | MS.gene054851:CDS | 25.0% |
| !!! | TGACTTTTGGTTAATGTTTT+TGG | - | chr7.3:20177011-20177030 | MS.gene054851:intron | 25.0% |
| AACTCCAAACAAACATATGA+AGG | + | chr7.3:20176862-20176881 | None:intergenic | 30.0% | |
| AAGAAACAACCAAATACTAG+TGG | + | chr7.3:20177184-20177203 | None:intergenic | 30.0% | |
| AAGACCTTCATATGTTTGTT+TGG | - | chr7.3:20176855-20176874 | MS.gene054851:intron | 30.0% | |
| ATAAGGCTGGAATAAGTATT+AGG | + | chr7.3:20177511-20177530 | None:intergenic | 30.0% | |
| ATAGATTTAGCAACAATAGC+AGG | + | chr7.3:20177657-20177676 | None:intergenic | 30.0% | |
| ATTGGTTATAACCTGTACAA+TGG | + | chr7.3:20177983-20178002 | None:intergenic | 30.0% | |
| CATTAACCAAAAGTCAAAAG+GGG | + | chr7.3:20177007-20177026 | None:intergenic | 30.0% | |
| CCTTTGTTAAAAGGAATGTA+TGG | - | chr7.3:20176221-20176240 | MS.gene054851:CDS | 30.0% | |
| GAACAACTATTTGAACCATA+AGG | + | chr7.3:20176262-20176281 | None:intergenic | 30.0% | |
| GAGACAAAAAATAACTCATC+AGG | + | chr7.3:20177095-20177114 | None:intergenic | 30.0% | |
| TATGGAAATGATCAGCTTAA+TGG | - | chr7.3:20176938-20176957 | MS.gene054851:intron | 30.0% | |
| TCAGCATTAGTCAAATTAGA+AGG | + | chr7.3:20176569-20176588 | None:intergenic | 30.0% | |
| TCCTACAACAAATGAAGAAA+AGG | + | chr7.3:20177935-20177954 | None:intergenic | 30.0% | |
| TGATTCTGATGTTCTTTCTT+TGG | - | chr7.3:20176397-20176416 | MS.gene054851:CDS | 30.0% | |
| TGTTTGTATCCACTAGTATT+TGG | - | chr7.3:20177172-20177191 | MS.gene054851:intron | 30.0% | |
| TTAGTCAAATTAGAAGGTCT+TGG | + | chr7.3:20176563-20176582 | None:intergenic | 30.0% | |
| TTGTCTCTACTATTAGTACT+TGG | - | chr7.3:20177108-20177127 | MS.gene054851:intron | 30.0% | |
| TTGTTCTTGACCAAATGAAA+AGG | + | chr7.3:20176124-20176143 | None:intergenic | 30.0% | |
| ! | AATACTTATTCCAGCCTTAT+TGG | - | chr7.3:20177511-20177530 | MS.gene054851:CDS | 30.0% |
| ! | ACAATCTAACTTTGGAAGTT+TGG | - | chr7.3:20176694-20176713 | MS.gene054851:CDS | 30.0% |
| ! | ATAGCAATTTTATCTGATGC+TGG | - | chr7.3:20177675-20177694 | MS.gene054851:CDS | 30.0% |
| ! | CAATCTAACTTTGGAAGTTT+GGG | - | chr7.3:20176695-20176714 | MS.gene054851:CDS | 30.0% |
| ! | CCATACATTCCTTTTAACAA+AGG | + | chr7.3:20176224-20176243 | None:intergenic | 30.0% |
| ! | GTTGGTAAAGTTAATGGAAA+TGG | - | chr7.3:20176737-20176756 | MS.gene054851:CDS | 30.0% |
| ! | TGTGTGTTTTGTGTATTTCT+AGG | - | chr7.3:20178063-20178082 | MS.gene054851:CDS | 30.0% |
| !!! | ATTTTTTCTAGAAGGTCTCA+TGG | - | chr7.3:20176512-20176531 | MS.gene054851:intron | 30.0% |
| !!! | GAACTTCTGGTTTTGTTTAT+TGG | + | chr7.3:20178001-20178020 | None:intergenic | 30.0% |
| !!! | GACAAGACTCATTTTGATTA+TGG | - | chr7.3:20177462-20177481 | MS.gene054851:CDS | 30.0% |
| AGGATGAACATTGTATTCCT+TGG | + | chr7.3:20178125-20178144 | None:intergenic | 35.0% | |
| AGTCCTAGACAATCTAACTT+TGG | - | chr7.3:20176686-20176705 | MS.gene054851:CDS | 35.0% | |
| ATAATAGAACCAGCAGTATC+AGG | + | chr7.3:20176365-20176384 | None:intergenic | 35.0% | |
| ATGAAATGGAATGAGAGTAG+TGG | + | chr7.3:20176023-20176042 | None:intergenic | 35.0% | |
| ATGGGCATTCCTTTGTTAAA+AGG | - | chr7.3:20176212-20176231 | MS.gene054851:CDS | 35.0% | |
| ATTCCTTGGCAAACACAAAA+GGG | + | chr7.3:20178111-20178130 | None:intergenic | 35.0% | |
| CTTCCAAAGTTAGATTGTCT+AGG | + | chr7.3:20176692-20176711 | None:intergenic | 35.0% | |
| GGAAATAGAACTGTTGCTAA+TGG | - | chr7.3:20177319-20177338 | MS.gene054851:intron | 35.0% | |
| GGTAAAGTTAATGGAAATGG+TGG | - | chr7.3:20176740-20176759 | MS.gene054851:CDS | 35.0% | |
| TATTCCTTGGCAAACACAAA+AGG | + | chr7.3:20178112-20178131 | None:intergenic | 35.0% | |
| TCTGATGTTCTTTCTTTGGA+TGG | - | chr7.3:20176401-20176420 | MS.gene054851:CDS | 35.0% | |
| TGAATAAGCAAGGCTTAAGT+GGG | - | chr7.3:20177135-20177154 | MS.gene054851:intron | 35.0% | |
| TGATTAAAACTAGACCCTCT+TGG | + | chr7.3:20176626-20176645 | None:intergenic | 35.0% | |
| TGGTGTGGAGAAAATTGATT+AGG | - | chr7.3:20177482-20177501 | MS.gene054851:CDS | 35.0% | |
| TTGAATAAGCAAGGCTTAAG+TGG | - | chr7.3:20177134-20177153 | MS.gene054851:intron | 35.0% | |
| TTGCCTATGGTTCAGTAAAA+TGG | - | chr7.3:20175934-20175953 | MS.gene054851:CDS | 35.0% | |
| TTTATGCCTGAACATTGATC+TGG | + | chr7.3:20175975-20175994 | None:intergenic | 35.0% | |
| TTTCCACAAGCAATAATCCT+TGG | + | chr7.3:20177856-20177875 | None:intergenic | 35.0% | |
| ! | ACTTCCTAACACACTTGTTA+TGG | - | chr7.3:20176193-20176212 | MS.gene054851:CDS | 35.0% |
| ! | ACTTGGTAGTTGAATAAGCA+AGG | - | chr7.3:20177125-20177144 | MS.gene054851:intron | 35.0% |
| ! | ATTTTACTGAACCATAGGCA+AGG | + | chr7.3:20175935-20175954 | None:intergenic | 35.0% |
| ! | GATTGTTGGTTGAGATGAAA+TGG | + | chr7.3:20176037-20176056 | None:intergenic | 35.0% |
| ! | GTTAATGGAAATGGTGGAAA+TGG | - | chr7.3:20176746-20176765 | MS.gene054851:CDS | 35.0% |
| ! | TCCTAACACTCCTTTTCATT+TGG | - | chr7.3:20176111-20176130 | MS.gene054851:intron | 35.0% |
| !! | ACCAAATGAAAAGGAGTGTT+AGG | + | chr7.3:20176115-20176134 | None:intergenic | 35.0% |
| !! | AGTGGTGTTGGTAAAGTTAA+TGG | - | chr7.3:20176731-20176750 | MS.gene054851:CDS | 35.0% |
| !! | CTGCAAAAAGTGCTACAAAA+CGG | + | chr7.3:20175998-20176017 | None:intergenic | 35.0% |
| !! | CTTCCTAACACACTTGTTAT+GGG | - | chr7.3:20176194-20176213 | MS.gene054851:CDS | 35.0% |
| !! | CTTTCATATTGTTTTGCAGG+TGG | - | chr7.3:20177619-20177638 | MS.gene054851:CDS | 35.0% |
| !! | TTCATTTGTTGTAGGACTCA+GGG | - | chr7.3:20177939-20177958 | MS.gene054851:CDS | 35.0% |
| !!! | GACTCATTTTGATTATGGTG+TGG | - | chr7.3:20177467-20177486 | MS.gene054851:CDS | 35.0% |
| !!! | GCCTTTTCTTCATTTGTTGT+AGG | - | chr7.3:20177931-20177950 | MS.gene054851:CDS | 35.0% |
| !!! | GGAGTGAGATTTTTTCTAGA+AGG | - | chr7.3:20176504-20176523 | MS.gene054851:intron | 35.0% |
| AACCTGTAGTTCATGGTGTA+AGG | + | chr7.3:20176059-20176078 | None:intergenic | 40.0% | |
| AATGGAGTAGCTCACCAAAA+AGG | - | chr7.3:20176956-20176975 | MS.gene054851:intron | 40.0% | |
| ACAAAAGGGACTATTCCTTG+GGG | + | chr7.3:20178097-20178116 | None:intergenic | 40.0% | |
| ACACAAAAGGGACTATTCCT+TGG | + | chr7.3:20178099-20178118 | None:intergenic | 40.0% | |
| ACCTGTGGCTAATAAGAAGA+AGG | - | chr7.3:20176802-20176821 | MS.gene054851:CDS | 40.0% | |
| ACTGAGCTTCATCCTAAAGA+TGG | - | chr7.3:20177391-20177410 | MS.gene054851:CDS | 40.0% | |
| ACTTCAGCTTCAGTTTGAAG+TGG | + | chr7.3:20176434-20176453 | None:intergenic | 40.0% | |
| ATCCTGACATTCTTAGCACT+GGG | - | chr7.3:20178140-20178159 | MS.gene054851:CDS | 40.0% | |
| ATCCTTACACCATGAACTAC+AGG | - | chr7.3:20176054-20176073 | MS.gene054851:intron | 40.0% | |
| ATGCCCATAACAAGTGTGTT+AGG | + | chr7.3:20176200-20176219 | None:intergenic | 40.0% | |
| CACAAAAGGGACTATTCCTT+GGG | + | chr7.3:20178098-20178117 | None:intergenic | 40.0% | |
| CATCCTAAAGATGGATCTCA+AGG | - | chr7.3:20177400-20177419 | MS.gene054851:CDS | 40.0% | |
| CCTATGGTTCAGTAAAATGG+TGG | - | chr7.3:20175937-20175956 | MS.gene054851:CDS | 40.0% | |
| CCTGTGGCTAATAAGAAGAA+GGG | - | chr7.3:20176803-20176822 | MS.gene054851:CDS | 40.0% | |
| CTTCAAACTGAAGCTGAAGT+TGG | - | chr7.3:20176434-20176453 | MS.gene054851:CDS | 40.0% | |
| GAAAAAATCCCTGCACTATG+AGG | + | chr7.3:20176782-20176801 | None:intergenic | 40.0% | |
| GAATAAGCAAGGCTTAAGTG+GGG | - | chr7.3:20177136-20177155 | MS.gene054851:intron | 40.0% | |
| GGACTACTTGTGTGTTTGTA+GGG | - | chr7.3:20177812-20177831 | MS.gene054851:CDS | 40.0% | |
| GTTCATGGTGTAAGGATTGT+TGG | + | chr7.3:20176051-20176070 | None:intergenic | 40.0% | |
| TAGAACTGTTGCTAATGGTG+TGG | - | chr7.3:20177324-20177343 | MS.gene054851:intron | 40.0% | |
| TCACCTTGAGATCCATCTTT+AGG | + | chr7.3:20177406-20177425 | None:intergenic | 40.0% | |
| TGATGATTCTGGTACCCTTA+TGG | - | chr7.3:20176244-20176263 | MS.gene054851:CDS | 40.0% | |
| TGCTATGAACCTGTAGTTCA+TGG | + | chr7.3:20176066-20176085 | None:intergenic | 40.0% | |
| TGGACTACTTGTGTGTTTGT+AGG | - | chr7.3:20177811-20177830 | MS.gene054851:CDS | 40.0% | |
| TGTGTTTGTAGGGTTGTTCA+TGG | - | chr7.3:20177822-20177841 | MS.gene054851:CDS | 40.0% | |
| TTCACACCAGATCAATGTTC+AGG | - | chr7.3:20175966-20175985 | MS.gene054851:CDS | 40.0% | |
| ! | AGTCTTGTCATAACACTAGC+AGG | + | chr7.3:20177451-20177470 | None:intergenic | 40.0% |
| ! | CCACCATTTTACTGAACCAT+AGG | + | chr7.3:20175940-20175959 | None:intergenic | 40.0% |
| ! | GGAATGTATGGTGATGATTC+TGG | - | chr7.3:20176233-20176252 | MS.gene054851:CDS | 40.0% |
| ! | GGTCATGATGAGTTTAGCTT+TGG | - | chr7.3:20177298-20177317 | MS.gene054851:intron | 40.0% |
| ! | TTTAGAGGTGGTGGTGATTA+TGG | - | chr7.3:20176920-20176939 | MS.gene054851:intron | 40.0% |
| !! | ATTTTATCTGATGCTGGCCT+TGG | - | chr7.3:20177681-20177700 | MS.gene054851:CDS | 40.0% |
| !! | CTTCATTTGTTGTAGGACTC+AGG | - | chr7.3:20177938-20177957 | MS.gene054851:CDS | 40.0% |
| !! | TCATTTGTTGTAGGACTCAG+GGG | - | chr7.3:20177940-20177959 | MS.gene054851:CDS | 40.0% |
| !! | TGTTTGAATATAGGGGTGCT+AGG | - | chr7.3:20176318-20176337 | MS.gene054851:intron | 40.0% |
| !!! | GATTTGCCCCTTTTGACTTT+TGG | - | chr7.3:20176998-20177017 | MS.gene054851:intron | 40.0% |
| AACCCAGTGCTAAGAATGTC+AGG | + | chr7.3:20178145-20178164 | None:intergenic | 45.0% | |
| AATAAGAAGAAGGGCCATGG+TGG | - | chr7.3:20176812-20176831 | MS.gene054851:intron | 45.0% | |
| AGTTGAGCTTGAACCAAGCT+TGG | + | chr7.3:20177371-20177390 | None:intergenic | 45.0% | |
| CAGCCAAGGATTATTGCTTG+TGG | - | chr7.3:20177850-20177869 | MS.gene054851:CDS | 45.0% | |
| CATCCTGACATTCTTAGCAC+TGG | - | chr7.3:20178139-20178158 | MS.gene054851:CDS | 45.0% | |
| CCCTTCTTCTTATTAGCCAC+AGG | + | chr7.3:20176806-20176825 | None:intergenic | 45.0% | |
| CTAGAAACCCTACACCAAGA+GGG | - | chr7.3:20176609-20176628 | MS.gene054851:CDS | 45.0% | |
| CTTGTCATAACACTAGCAGG+TGG | + | chr7.3:20177448-20177467 | None:intergenic | 45.0% | |
| GAACAGTTTCCTGATACTGC+TGG | - | chr7.3:20176353-20176372 | MS.gene054851:intron | 45.0% | |
| GAGACCAAGTGAGACCAATA+AGG | + | chr7.3:20177528-20177547 | None:intergenic | 45.0% | |
| GCTAATAAGAAGAAGGGCCA+TGG | - | chr7.3:20176809-20176828 | MS.gene054851:CDS | 45.0% | |
| GCTAATGGTGTGGACAAAGA+AGG | - | chr7.3:20177334-20177353 | MS.gene054851:intron | 45.0% | |
| GCTCAAGAGGGTCATTAGAA+TGG | - | chr7.3:20176144-20176163 | MS.gene054851:CDS | 45.0% | |
| GGAATGGCTATGTTTAGCCT+TGG | - | chr7.3:20177702-20177721 | MS.gene054851:CDS | 45.0% | |
| GGCTAAACATAGCCATTCCA+AGG | + | chr7.3:20177701-20177720 | None:intergenic | 45.0% | |
| GGTCAAGAACAAGCTCAAGA+GGG | - | chr7.3:20176132-20176151 | MS.gene054851:CDS | 45.0% | |
| GGTGGAATCCATGTCTTTAG+AGG | - | chr7.3:20176905-20176924 | MS.gene054851:intron | 45.0% | |
| GTTGCACATTGCCATTGTAC+AGG | - | chr7.3:20177969-20177988 | MS.gene054851:CDS | 45.0% | |
| TATTGCTTGTGGAAACACCG+TGG | - | chr7.3:20177861-20177880 | MS.gene054851:CDS | 45.0% | |
| TCTAGAAACCCTACACCAAG+AGG | - | chr7.3:20176608-20176627 | MS.gene054851:CDS | 45.0% | |
| TGGATTCCACCTTCAGAAAC+AGG | + | chr7.3:20176896-20176915 | None:intergenic | 45.0% | |
| TGGTCAAGAACAAGCTCAAG+AGG | - | chr7.3:20176131-20176150 | MS.gene054851:CDS | 45.0% | |
| TTTGACGAGGAAAGTGGTGT+TGG | - | chr7.3:20176719-20176738 | MS.gene054851:CDS | 45.0% | |
| ! | AAACTAGACCCTCTTGGTGT+AGG | + | chr7.3:20176620-20176639 | None:intergenic | 45.0% |
| ! | AACTAGACCCTCTTGGTGTA+GGG | + | chr7.3:20176619-20176638 | None:intergenic | 45.0% |
| ! | AGGTCTCATGGTGTTAACTC+TGG | - | chr7.3:20176524-20176543 | MS.gene054851:intron | 45.0% |
| ! | AGTCCCTTTTGTGTTTGCCA+AGG | - | chr7.3:20178105-20178124 | MS.gene054851:CDS | 45.0% |
| ! | ATCCATGTCTTTAGAGGTGG+TGG | - | chr7.3:20176911-20176930 | MS.gene054851:intron | 45.0% |
| ! | GGAATCCATGTCTTTAGAGG+TGG | - | chr7.3:20176908-20176927 | MS.gene054851:intron | 45.0% |
| ! | TATTGGTCTCACTTGGTCTC+TGG | - | chr7.3:20177528-20177547 | MS.gene054851:CDS | 45.0% |
| !! | AGGGGTGCTAGGATTCTTAT+TGG | - | chr7.3:20176329-20176348 | MS.gene054851:intron | 45.0% |
| !! | AGTGCTTCACCTGTTTCTGA+AGG | - | chr7.3:20176884-20176903 | MS.gene054851:intron | 45.0% |
| !! | GAAGCTGAAGTTGGTGAAGA+TGG | - | chr7.3:20176443-20176462 | MS.gene054851:CDS | 45.0% |
| !! | TGGAAGTTTGGGTTTTGACG+AGG | - | chr7.3:20176706-20176725 | MS.gene054851:CDS | 45.0% |
| !! | TTGGGTTTTGACGAGGAAAG+TGG | - | chr7.3:20176713-20176732 | MS.gene054851:CDS | 45.0% |
| !!! | TGCAGGGATTTTTTCACCTG+TGG | - | chr7.3:20176787-20176806 | MS.gene054851:CDS | 45.0% |
| CCAAGTGAGACCAATAAGGC+TGG | + | chr7.3:20177524-20177543 | None:intergenic | 50.0% | |
| CTAGCAGGTGGCATGTTTGT+TGG | + | chr7.3:20177436-20177455 | None:intergenic | 50.0% | |
| CTTGGTCTCTGGTCTCATTC+AGG | - | chr7.3:20177539-20177558 | MS.gene054851:CDS | 50.0% | |
| GAACCAAGCTTGGATAGCAC+TGG | + | chr7.3:20177361-20177380 | None:intergenic | 50.0% | |
| GAAGAAAAGGCCATGACAGC+AGG | + | chr7.3:20177922-20177941 | None:intergenic | 50.0% | |
| TGTTCATGGCATTGCAGCCA+AGG | - | chr7.3:20177836-20177855 | MS.gene054851:CDS | 50.0% | |
| ! | CACCACCACCTCTAAAGACA+TGG | + | chr7.3:20176916-20176935 | None:intergenic | 50.0% |
| !! | ATCTGATGCTGGCCTTGGAA+TGG | - | chr7.3:20177686-20177705 | MS.gene054851:CDS | 50.0% |
| !! | CCAGCCTTATTGGTCTCACT+TGG | - | chr7.3:20177521-20177540 | MS.gene054851:CDS | 50.0% |
| !! | GCTTCACCTGTTTCTGAAGG+TGG | - | chr7.3:20176887-20176906 | MS.gene054851:intron | 50.0% |
| AAAGGCCATGACAGCAGGAC+CGG | + | chr7.3:20177917-20177936 | None:intergenic | 55.0% | |
| AAGAAGAAGGGCCATGGTGG+TGG | - | chr7.3:20176815-20176834 | MS.gene054851:intron | 55.0% | |
| ACCCTGCTCCTCATAGTGCA+GGG | - | chr7.3:20176771-20176790 | MS.gene054851:CDS | 55.0% | |
| ATCCCTGCACTATGAGGAGC+AGG | + | chr7.3:20176776-20176795 | None:intergenic | 55.0% | |
| ATGGCGGTTCGCTTCCTTAC+CGG | - | chr7.3:20177895-20177914 | MS.gene054851:CDS | 55.0% | |
| GGACCAGTGCTATCCAAGCT+TGG | - | chr7.3:20177355-20177374 | MS.gene054851:intron | 55.0% | |
| TACCCTGCTCCTCATAGTGC+AGG | - | chr7.3:20176770-20176789 | MS.gene054851:CDS | 55.0% | |
| TCCCTGCACTATGAGGAGCA+GGG | + | chr7.3:20176775-20176794 | None:intergenic | 55.0% | |
| TTCTAGGCTGCTCTTCCCCA+AGG | - | chr7.3:20178079-20178098 | MS.gene054851:CDS | 55.0% | |
| CACCGTGGCTTCTTTCGCGA+TGG | - | chr7.3:20177876-20177895 | MS.gene054851:CDS | 60.0% | |
| CATCACCAGCACCACCACCA+TGG | + | chr7.3:20176829-20176848 | None:intergenic | 60.0% | |
| CCATGACAGCAGGACCGGTA+AGG | + | chr7.3:20177912-20177931 | None:intergenic | 60.0% | |
| CCTTACCGGTCCTGCTGTCA+TGG | - | chr7.3:20177909-20177928 | MS.gene054851:CDS | 60.0% | |
| CGCCATCGCGAAAGAAGCCA+CGG | + | chr7.3:20177881-20177900 | None:intergenic | 60.0% | |
| CGTGGCTTCTTTCGCGATGG+CGG | - | chr7.3:20177879-20177898 | MS.gene054851:CDS | 60.0% | |
| !! | CATGGTGGTGGTGCTGGTGA+TGG | - | chr7.3:20176827-20176846 | MS.gene054851:intron | 60.0% |
| !! | AAGGGCCATGGTGGTGGTGC+TGG | - | chr7.3:20176821-20176840 | MS.gene054851:intron | 65.0% |
| !! | GGTGGTGGTGCTGGTGATGG+TGG | - | chr7.3:20176830-20176849 | MS.gene054851:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 20175927 | 20178186 | 20175927 | ID=MS.gene054851 |
| chr7.3 | mRNA | 20175927 | 20178186 | 20175927 | ID=MS.gene054851.t1;Parent=MS.gene054851 |
| chr7.3 | exon | 20177373 | 20178186 | 20177373 | ID=MS.gene054851.t1.exon1;Parent=MS.gene054851.t1 |
| chr7.3 | CDS | 20177373 | 20178186 | 20177373 | ID=cds.MS.gene054851.t1;Parent=MS.gene054851.t1 |
| chr7.3 | exon | 20176553 | 20176829 | 20176553 | ID=MS.gene054851.t1.exon2;Parent=MS.gene054851.t1 |
| chr7.3 | CDS | 20176553 | 20176829 | 20176553 | ID=cds.MS.gene054851.t1;Parent=MS.gene054851.t1 |
| chr7.3 | exon | 20176390 | 20176475 | 20176390 | ID=MS.gene054851.t1.exon3;Parent=MS.gene054851.t1 |
| chr7.3 | CDS | 20176390 | 20176475 | 20176390 | ID=cds.MS.gene054851.t1;Parent=MS.gene054851.t1 |
| chr7.3 | exon | 20176123 | 20176280 | 20176123 | ID=MS.gene054851.t1.exon4;Parent=MS.gene054851.t1 |
| chr7.3 | CDS | 20176123 | 20176280 | 20176123 | ID=cds.MS.gene054851.t1;Parent=MS.gene054851.t1 |
| chr7.3 | exon | 20175927 | 20176028 | 20175927 | ID=MS.gene054851.t1.exon5;Parent=MS.gene054851.t1 |
| chr7.3 | CDS | 20175927 | 20176028 | 20175927 | ID=cds.MS.gene054851.t1;Parent=MS.gene054851.t1 |
| Gene Sequence |
| Protein sequence |
