Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054633.t1 | XP_003603025.1 | 97.2 | 216 | 6 | 0 | 1 | 216 | 16 | 231 | 1.90E-114 | 421.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054633.t1 | Q1G3M3 | 52.0 | 221 | 92 | 4 | 1 | 216 | 16 | 227 | 1.2e-51 | 204.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054633.t1 | G7J6B9 | 97.2 | 216 | 6 | 0 | 1 | 216 | 16 | 231 | 1.4e-114 | 421.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene054633.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene054633 | 0.844573 | 6.95E-59 | -1.69E-46 |
| MS.gene050874 | MS.gene054633 | 0.8159 | 7.30E-52 | -1.69E-46 |
| MS.gene050875 | MS.gene054633 | 0.847777 | 9.33E-60 | -1.69E-46 |
| MS.gene05124 | MS.gene054633 | 0.826804 | 2.22E-54 | -1.69E-46 |
| MS.gene051914 | MS.gene054633 | 0.884323 | 2.12E-71 | -1.69E-46 |
| MS.gene052143 | MS.gene054633 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene054633 | 0.866751 | 2.27E-65 | -1.69E-46 |
| MS.gene052367 | MS.gene054633 | 0.82144 | 4.03E-53 | -1.69E-46 |
| MS.gene053173 | MS.gene054633 | 0.883381 | 4.71E-71 | -1.69E-46 |
| MS.gene053348 | MS.gene054633 | 0.825037 | 5.83E-54 | -1.69E-46 |
| MS.gene053416 | MS.gene054633 | 0.828752 | 7.55E-55 | -1.69E-46 |
| MS.gene053417 | MS.gene054633 | 0.825951 | 3.54E-54 | -1.69E-46 |
| MS.gene054018 | MS.gene054633 | 0.801553 | 8.53E-49 | -1.69E-46 |
| MS.gene054459 | MS.gene054633 | 0.802108 | 6.56E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene054633 | 0.874704 | 5.48E-68 | -1.69E-46 |
| MS.gene054552 | MS.gene054633 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene054593 | MS.gene054633 | 0.863387 | 2.58E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene054662 | 0.842626 | 2.30E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene054941 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene055308 | 0.842696 | 2.21E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene055578 | 0.852579 | 4.21E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene056041 | 0.833951 | 3.97E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene05640 | 0.874448 | 6.70E-68 | -1.69E-46 |
| MS.gene054633 | MS.gene056526 | 0.815407 | 9.39E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene056528 | 0.828807 | 7.32E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene05652 | 0.848619 | 5.46E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene057367 | 0.833408 | 5.43E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene057458 | 0.817718 | 2.85E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene058013 | 0.812991 | 3.21E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene058128 | 0.858225 | 9.53E-63 | -1.69E-46 |
| MS.gene054633 | MS.gene058828 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene058853 | 0.865837 | 4.42E-65 | -1.69E-46 |
| MS.gene054633 | MS.gene05926 | 0.818096 | 2.34E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene059553 | 0.834246 | 3.35E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene059616 | 0.833542 | 5.02E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene060473 | 0.812459 | 4.20E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene06093 | 0.880701 | 4.42E-70 | -1.69E-46 |
| MS.gene054633 | MS.gene061099 | 0.828845 | 7.17E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene061260 | 0.828821 | 7.27E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene061275 | 0.825597 | 4.30E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene061303 | 0.820843 | 5.54E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene061357 | 0.829616 | 4.66E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene061706 | 0.815781 | 7.75E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene062638 | 0.846988 | 1.54E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene063115 | -0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene063235 | 0.851297 | 9.73E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene063308 | 0.844918 | 5.61E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene06375 | 0.829473 | 5.05E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene06421 | 0.80483 | 1.79E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene064328 | 0.834692 | 2.59E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene064724 | 0.813116 | 3.01E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene064834 | 0.807261 | 5.51E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene066026 | 0.868216 | 7.70E-66 | -1.69E-46 |
| MS.gene054633 | MS.gene066265 | 0.813976 | 1.95E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene066358 | 0.826386 | 2.79E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene066359 | 0.851608 | 7.95E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene066563 | 0.835855 | 1.32E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene066564 | 0.848914 | 4.52E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene066779 | 0.809526 | 1.81E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene066875 | 0.810748 | 9.88E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene066876 | 0.833083 | 6.54E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene067030 | 0.840447 | 8.65E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene067074 | 0.82099 | 5.12E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene067376 | 0.824797 | 6.64E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene068197 | 0.807907 | 4.02E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene068305 | 0.827944 | 1.18E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene068585 | 0.809601 | 1.75E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene069090 | 0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene069120 | 0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene069771 | 0.835922 | 1.27E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene070118 | 0.801414 | 9.11E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene070324 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene07051 | 0.824344 | 8.49E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene070800 | 0.851957 | 6.33E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene071422 | 0.847017 | 1.51E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene072366 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene072471 | 0.841958 | 3.46E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene073059 | 0.848609 | 5.50E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene073062 | 0.845612 | 3.64E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene073063 | 0.820204 | 7.76E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene073862 | 0.833491 | 5.17E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene073863 | 0.816639 | 4.98E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene074201 | 0.819484 | 1.13E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene074380 | -0.817798 | 2.73E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene074515 | 0.851489 | 8.58E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene07616 | 0.817024 | 4.09E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene08109 | 0.802189 | 6.31E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene09806 | 0.818982 | 1.48E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene20224 | 0.865158 | 7.23E-65 | -1.69E-46 |
| MS.gene054633 | MS.gene20231 | 0.820479 | 6.71E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene20960 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene21320 | 0.806099 | 9.70E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene21734 | 0.850275 | 1.89E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene21888 | 0.856002 | 4.32E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene22383 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene22399 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene22466 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene22500 | 0.818412 | 1.99E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene22939 | 0.821442 | 4.03E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene23050 | 0.833714 | 4.55E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene23886 | 0.857257 | 1.85E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene25042 | 0.800645 | 1.31E-48 | -1.69E-46 |
| MS.gene054633 | MS.gene25398 | -0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene054633 | MS.gene25797 | 0.856489 | 3.11E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene26109 | 0.847806 | 9.16E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene26406 | 0.855811 | 4.91E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene26619 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene26706 | 0.800576 | 1.35E-48 | -1.69E-46 |
| MS.gene054633 | MS.gene26721 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene27811 | 0.86248 | 4.92E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene27812 | 0.855855 | 4.77E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene28158 | -0.833601 | 4.86E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene28288 | -0.853547 | 2.22E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene28452 | 0.854349 | 1.31E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene28807 | 0.81448 | 1.51E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene28867 | 0.837456 | 5.14E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene28912 | 0.846431 | 2.18E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene28923 | 0.858735 | 6.72E-63 | -1.69E-46 |
| MS.gene054633 | MS.gene29337 | 0.841746 | 3.94E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene29939 | 0.805159 | 1.53E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene29940 | 0.826195 | 3.10E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene29942 | 0.80993 | 1.48E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene31917 | 0.835219 | 1.91E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene31973 | 0.853087 | 3.01E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene32048 | 0.804094 | 2.55E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene32271 | -0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene054633 | MS.gene32306 | 0.854612 | 1.10E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene32740 | 0.833434 | 5.35E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene33809 | 0.839239 | 1.78E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene34503 | 0.838057 | 3.60E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene34573 | 0.837897 | 3.96E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene35150 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene35711 | 0.811295 | 7.52E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene35795 | 0.822263 | 2.60E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene35821 | 0.802631 | 5.12E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene35853 | 0.828338 | 9.51E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene35931 | 0.82063 | 6.20E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene36032 | 0.814139 | 1.79E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene36271 | 0.84957 | 2.97E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene36273 | 0.805029 | 1.63E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene37195 | 0.821816 | 3.30E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene37495 | 0.880873 | 3.83E-70 | -1.69E-46 |
| MS.gene054633 | MS.gene37925 | 0.845808 | 3.22E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene38102 | 0.832128 | 1.13E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene38118 | 0.822684 | 2.08E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene38166 | 0.802485 | 5.49E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene38615 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene38724 | 0.992431 | 2.99E-193 | -1.69E-46 |
| MS.gene054633 | MS.gene39469 | 0.857621 | 1.44E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene39911 | 0.883209 | 5.45E-71 | -1.69E-46 |
| MS.gene054633 | MS.gene40143 | 0.80315 | 4.00E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene40241 | 0.885497 | 7.73E-72 | -1.69E-46 |
| MS.gene054633 | MS.gene40329 | 0.824021 | 1.01E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene40405 | 0.82498 | 6.02E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene40689 | 0.873827 | 1.09E-67 | -1.69E-46 |
| MS.gene054633 | MS.gene40797 | 0.815461 | 9.14E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene40915 | 0.83689 | 7.18E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene41190 | 0.844728 | 6.32E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene42290 | 0.824359 | 8.43E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene42543 | 0.844258 | 8.45E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene42651 | 0.824544 | 7.62E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene42663 | 0.849977 | 2.29E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene42750 | 0.840911 | 6.54E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene43987 | 0.850437 | 1.70E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene44100 | 0.836326 | 9.99E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene44181 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene44251 | 0.850908 | 1.25E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene44439 | -0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene47007 | 0.862122 | 6.33E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene48067 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene48492 | 0.976385 | 1.01E-141 | -1.69E-46 |
| MS.gene054633 | MS.gene49165 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene49312 | 0.821824 | 3.29E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene49349 | 0.876112 | 1.81E-68 | -1.69E-46 |
| MS.gene054633 | MS.gene49961 | 0.816752 | 4.70E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene50449 | 0.80152 | 8.66E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene50450 | 0.80331 | 3.71E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene50484 | 0.82012 | 8.11E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene50576 | 0.890613 | 8.41E-74 | -1.69E-46 |
| MS.gene054633 | MS.gene50613 | 0.850654 | 1.48E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene51554 | 0.887154 | 1.83E-72 | -1.69E-46 |
| MS.gene054633 | MS.gene52363 | 0.834933 | 2.25E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene52403 | 0.862594 | 4.54E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene52980 | 0.887724 | 1.11E-72 | -1.69E-46 |
| MS.gene054633 | MS.gene53188 | 0.857795 | 1.28E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene53408 | 0.856444 | 3.20E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene53887 | 0.85124 | 1.01E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene55401 | 0.8461 | 2.69E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene55817 | 0.83346 | 5.26E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene57750 | 0.856497 | 3.09E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene57751 | 0.847786 | 9.28E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene57752 | 0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene58112 | 0.846842 | 1.68E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene58114 | 0.806896 | 6.58E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene58132 | 0.876895 | 9.70E-69 | -1.69E-46 |
| MS.gene054633 | MS.gene58165 | -0.826206 | 3.08E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene58234 | 0.843734 | 1.17E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene58285 | 0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene58753 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene58754 | 0.820075 | 8.31E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene58835 | 0.857099 | 2.06E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene59357 | 0.817263 | 3.61E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene59466 | 0.824796 | 6.65E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene60176 | -0.808943 | 2.42E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene60177 | -0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene60269 | 0.872626 | 2.75E-67 | -1.69E-46 |
| MS.gene054633 | MS.gene60329 | 0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene61094 | 0.844419 | 7.65E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene61107 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene61144 | -0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene61145 | -0.802333 | 5.90E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene61618 | 0.863861 | 1.84E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene61684 | 0.882 | 1.50E-70 | -1.69E-46 |
| MS.gene054633 | MS.gene61977 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene62208 | 0.823749 | 1.17E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene63320 | 0.812592 | 3.92E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene63469 | 0.857216 | 1.90E-62 | -1.69E-46 |
| MS.gene054633 | MS.gene65301 | 0.868776 | 5.08E-66 | -1.69E-46 |
| MS.gene054633 | MS.gene65431 | 0.88659 | 3.00E-72 | -1.69E-46 |
| MS.gene054633 | MS.gene66043 | 0.812389 | 4.35E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene66615 | 0.839665 | 1.38E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene67171 | 0.840769 | 7.12E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene67555 | 0.859891 | 3.02E-63 | -1.69E-46 |
| MS.gene054633 | MS.gene69077 | 0.860402 | 2.12E-63 | -1.69E-46 |
| MS.gene054633 | MS.gene69328 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene69722 | 0.831523 | 1.59E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene69952 | 0.803878 | 2.82E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene70263 | 0.878359 | 2.99E-69 | -1.69E-46 |
| MS.gene054633 | MS.gene70279 | 0.864421 | 1.23E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene70306 | -0.820458 | 6.79E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene70403 | 0.843019 | 1.81E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene71431 | 0.84738 | 1.20E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene71625 | 0.804089 | 2.55E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene72088 | 0.864577 | 1.10E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene74328 | 0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene74548 | 0.808199 | 3.48E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene74984 | 0.804412 | 2.19E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene75179 | 0.818749 | 1.67E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene75318 | 0.819991 | 8.68E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene75320 | 0.822325 | 2.52E-53 | -1.69E-46 |
| MS.gene054633 | MS.gene75535 | 0.833152 | 6.28E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene75579 | 0.839379 | 1.64E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene75642 | 0.849528 | 3.05E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene75761 | 0.834039 | 3.77E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene75915 | 0.84185 | 3.70E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene75918 | 0.845163 | 4.82E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene76883 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene77563 | 0.854051 | 1.59E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene78224 | 0.817267 | 3.60E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene78250 | 0.826972 | 2.02E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene78529 | 0.848994 | 4.30E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene78560 | 0.809668 | 1.69E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene78972 | 0.830995 | 2.14E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene79251 | 0.828363 | 9.37E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene79921 | 0.864559 | 1.11E-64 | -1.69E-46 |
| MS.gene054633 | MS.gene80899 | 0.858998 | 5.60E-63 | -1.69E-46 |
| MS.gene054633 | MS.gene83292 | 0.847925 | 8.49E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene85599 | 0.805973 | 1.03E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene87884 | 0.844809 | 6.01E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene89090 | 0.835665 | 1.47E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene89107 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene054633 | MS.gene89653 | 0.866828 | 2.14E-65 | -1.69E-46 |
| MS.gene054633 | MS.gene90302 | 0.831278 | 1.83E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene90842 | 0.818008 | 2.45E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene91300 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene91412 | 0.840202 | 1.00E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene91781 | 0.837581 | 4.78E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene92313 | 0.843329 | 1.50E-58 | -1.69E-46 |
| MS.gene054633 | MS.gene93017 | 0.845624 | 3.61E-59 | -1.69E-46 |
| MS.gene054633 | MS.gene93058 | 0.837941 | 3.86E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene93762 | 0.850981 | 1.19E-60 | -1.69E-46 |
| MS.gene054633 | MS.gene93854 | 0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene94954 | 0.826634 | 2.44E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene97258 | 0.801232 | 9.92E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene97259 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene97981 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene99337 | 0.816635 | 5.00E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene99885 | 0.807653 | 4.55E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054633.t1 | MTR_3g101520 | 99.537 | 216 | 1 | 0 | 1 | 216 | 16 | 231 | 6.78e-163 | 449 |
| MS.gene054633.t1 | MTR_3g101520 | 95.833 | 216 | 1 | 1 | 1 | 216 | 16 | 223 | 1.92e-152 | 422 |
| MS.gene054633.t1 | MTR_2g102450 | 43.519 | 216 | 114 | 5 | 3 | 212 | 22 | 235 | 2.34e-44 | 153 |
| MS.gene054633.t1 | MTR_2g102450 | 54.167 | 120 | 55 | 0 | 93 | 212 | 62 | 181 | 3.11e-39 | 138 |
| MS.gene054633.t1 | MTR_4g008310 | 47.934 | 121 | 63 | 0 | 93 | 213 | 191 | 311 | 3.79e-33 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054633.t1 | AT5G42700 | 55.450 | 211 | 87 | 2 | 1 | 210 | 17 | 221 | 2.08e-72 | 219 |
| MS.gene054633.t1 | AT3G19184 | 56.621 | 219 | 85 | 4 | 1 | 216 | 16 | 227 | 1.41e-71 | 219 |
| MS.gene054633.t1 | AT3G19184 | 56.621 | 219 | 85 | 4 | 1 | 216 | 16 | 227 | 1.60e-71 | 219 |
| MS.gene054633.t1 | AT5G42700 | 55.056 | 178 | 74 | 1 | 33 | 210 | 5 | 176 | 4.51e-62 | 192 |
| MS.gene054633.t1 | AT5G58280 | 37.019 | 208 | 121 | 4 | 11 | 212 | 49 | 252 | 3.61e-35 | 126 |
| MS.gene054633.t1 | AT5G58280 | 36.842 | 209 | 121 | 5 | 11 | 212 | 49 | 253 | 2.04e-33 | 122 |
| MS.gene054633.t1 | AT5G58280 | 35.945 | 217 | 123 | 5 | 1 | 211 | 13 | 219 | 8.20e-33 | 119 |
Find 53 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTGAAATTCTATTTCT+AGG | 0.204642 | 3.4:-89419549 | None:intergenic |
| CTCATGTCACTGGTGGATTC+TGG | 0.287144 | 3.4:+89419808 | MS.gene054633:CDS |
| TGAGTCTCCAACTACATATT+TGG | 0.308296 | 3.4:+89422080 | MS.gene054633:CDS |
| ACAACGAGCTCTTTCTTGAT+AGG | 0.331075 | 3.4:-89419363 | None:intergenic |
| GTCATCACTTCGTCCCGTTT+TGG | 0.333776 | 3.4:-89422036 | None:intergenic |
| TTACAGACTTCTTTGTAAAC+AGG | 0.370188 | 3.4:-89419423 | None:intergenic |
| CTTGATAGGGGTGCGAGGTT+TGG | 0.379420 | 3.4:-89419349 | None:intergenic |
| TAGAGTGAATGAGGGTAAAC+AGG | 0.402295 | 3.4:+89422675 | MS.gene054633:CDS |
| CTCGTTGTTGTTCGAAGATC+CGG | 0.408143 | 3.4:+89419378 | MS.gene054633:CDS |
| TACCTAGAAATAGAATTTCA+AGG | 0.423170 | 3.4:+89419547 | MS.gene054633:CDS |
| ACATATTTGGCTCACAAAAC+AGG | 0.425458 | 3.4:+89422093 | MS.gene054633:CDS |
| AGTTAAACGCACTGCATTCA+AGG | 0.432696 | 3.4:+89422188 | MS.gene054633:CDS |
| ATTGCTCATAACCTTGTTGA+TGG | 0.442206 | 3.4:+89422144 | MS.gene054633:CDS |
| AGCATTGACTTGACAAAAGT+TGG | 0.443741 | 3.4:-89419780 | None:intergenic |
| TGCGTCCGACGAAGCTAGAA+TGG | 0.446516 | 3.4:+89419707 | MS.gene054633:CDS |
| CAACGAGCTCTTTCTTGATA+GGG | 0.456259 | 3.4:-89419362 | None:intergenic |
| ATCCACCAGTGACATGAGAT+TGG | 0.459124 | 3.4:-89419803 | None:intergenic |
| GGAAGAAAATCAAAAGAGAA+TGG | 0.470843 | 3.4:+89419254 | MS.gene054633:CDS |
| GCCTTCCAAATCATTTCTGC+AGG | 0.472041 | 3.4:+89422004 | MS.gene054633:CDS |
| ATGACTTTAATTGATGAGGA+TGG | 0.480177 | 3.4:+89422054 | MS.gene054633:CDS |
| GTGAAGTGATTGAGAGAGCT+TGG | 0.490518 | 3.4:-89419292 | None:intergenic |
| GTGGTGGATATGATAAGTAC+AGG | 0.491955 | 3.4:+89419664 | MS.gene054633:CDS |
| TGCTTCCATTCTAGCTTCGT+CGG | 0.496827 | 3.4:-89419712 | None:intergenic |
| GTACATTATTAGAGTGAATG+AGG | 0.501375 | 3.4:+89422666 | MS.gene054633:CDS |
| GTAAACAGGAGCAGGCATAT+TGG | 0.504680 | 3.4:-89419409 | None:intergenic |
| TGGATGATCAGAATCTAAAT+CGG | 0.505469 | 3.4:-89419760 | None:intergenic |
| GGTGCGAGGTTTGGAAGGTG+AGG | 0.511953 | 3.4:-89419340 | None:intergenic |
| CACAAAACAGGACTTAGTGC+TGG | 0.519162 | 3.4:+89422105 | MS.gene054633:CDS |
| ATGCTCCAATCTCATGTCAC+TGG | 0.520101 | 3.4:+89419798 | MS.gene054633:CDS |
| ACTTCTTTGTAAACAGGAGC+AGG | 0.521856 | 3.4:-89419417 | None:intergenic |
| CTCCAATCTCATGTCACTGG+TGG | 0.526085 | 3.4:+89419801 | MS.gene054633:CDS |
| CGAAGCTAGAATGGAAGCAA+TGG | 0.532880 | 3.4:+89419716 | MS.gene054633:CDS |
| TTGTGAGCCAAATATGTAGT+TGG | 0.534295 | 3.4:-89422087 | None:intergenic |
| TTGCTCATAACCTTGTTGAT+GGG | 0.536210 | 3.4:+89422145 | MS.gene054633:CDS |
| GACTTTAATTGATGAGGATG+GGG | 0.536969 | 3.4:+89422056 | MS.gene054633:CDS |
| AGGCATATTGGCGACACGAC+CGG | 0.537317 | 3.4:-89419397 | None:intergenic |
| TCCTGCAGAAATGATTTGGA+AGG | 0.537387 | 3.4:-89422005 | None:intergenic |
| GTGCGAGGTTTGGAAGGTGA+GGG | 0.543398 | 3.4:-89419339 | None:intergenic |
| TGACTTTAATTGATGAGGAT+GGG | 0.546142 | 3.4:+89422055 | MS.gene054633:CDS |
| TGTCACTGGTGGATTCTGGC+TGG | 0.546764 | 3.4:+89419812 | MS.gene054633:CDS |
| TGCTCATAACCTTGTTGATG+GGG | 0.557712 | 3.4:+89422146 | MS.gene054633:CDS |
| ATAGGGGTGCGAGGTTTGGA+AGG | 0.572029 | 3.4:-89419345 | None:intergenic |
| AACGAGCTCTTTCTTGATAG+GGG | 0.578112 | 3.4:-89419361 | None:intergenic |
| GGACTTAGTGCTGGATGGAG+AGG | 0.579069 | 3.4:+89422114 | MS.gene054633:CDS |
| GTACAGGGATTATTCGAAGC+GGG | 0.591336 | 3.4:+89419680 | MS.gene054633:CDS |
| TACATTATTAGAGTGAATGA+GGG | 0.593532 | 3.4:+89422667 | MS.gene054633:CDS |
| AAACAGGACTTAGTGCTGGA+TGG | 0.601864 | 3.4:+89422109 | MS.gene054633:CDS |
| AGTGATGACTTTAATTGATG+AGG | 0.610611 | 3.4:+89422050 | MS.gene054633:CDS |
| TAGAATGGAAGCAATGGAGA+AGG | 0.631866 | 3.4:+89419722 | MS.gene054633:CDS |
| TGGTGGATATGATAAGTACA+GGG | 0.664434 | 3.4:+89419665 | MS.gene054633:CDS |
| TCTTTCTTGATAGGGGTGCG+AGG | 0.664811 | 3.4:-89419354 | None:intergenic |
| TTAAAGCATCCCCATCAACA+AGG | 0.671282 | 3.4:-89422155 | None:intergenic |
| AGTACAGGGATTATTCGAAG+CGG | 0.715139 | 3.4:+89419679 | MS.gene054633:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTATCTTATTTTTATTAA+AGG | - | chr3.4:89420353-89420372 | None:intergenic | 10.0% |
| !!! | AGTATCTTATTTTTATTAAA+GGG | - | chr3.4:89420352-89420371 | None:intergenic | 10.0% |
| !!! | TAATTTAATTTATTTGTACA+AGG | - | chr3.4:89421869-89421888 | None:intergenic | 10.0% |
| !! | AAAAAATATACATTAGACAA+TGG | - | chr3.4:89420666-89420685 | None:intergenic | 15.0% |
| !! | AACATAACATATATAATAGT+TGG | - | chr3.4:89421761-89421780 | None:intergenic | 15.0% |
| !! | ACATAACATATATAATAGTT+GGG | - | chr3.4:89421760-89421779 | None:intergenic | 15.0% |
| !! | ATACAACTACAATTTATAAT+TGG | + | chr3.4:89421951-89421970 | MS.gene054633:intron | 15.0% |
| !! | TATAAAGATGTTAAAAAAAG+AGG | + | chr3.4:89419957-89419976 | MS.gene054633:intron | 15.0% |
| !! | TATTATATATGTTATGTTGA+GGG | + | chr3.4:89421763-89421782 | MS.gene054633:intron | 15.0% |
| !! | TGATAACATGTATTATAAAT+AGG | - | chr3.4:89422397-89422416 | None:intergenic | 15.0% |
| !! | TTGACAAATTTAAATCTATA+TGG | + | chr3.4:89421723-89421742 | MS.gene054633:intron | 15.0% |
| !! | TTTCATAATATAAAATGAAG+TGG | + | chr3.4:89420606-89420625 | MS.gene054633:intron | 15.0% |
| !!! | GTATCTTATTTTTATTAAAG+GGG | - | chr3.4:89420351-89420370 | None:intergenic | 15.0% |
| !!! | TTATAATTGGTTAATCATTT+TGG | + | chr3.4:89421964-89421983 | MS.gene054633:intron | 15.0% |
| !! | AATACTACTGATATTTATCT+AGG | + | chr3.4:89422550-89422569 | MS.gene054633:intron | 20.0% |
| !! | AGTAATAGAGAAAGATAAAA+TGG | - | chr3.4:89419471-89419490 | None:intergenic | 20.0% |
| !! | CACCTATATTAGATTATTTA+CGG | + | chr3.4:89420870-89420889 | MS.gene054633:intron | 20.0% |
| !! | CCACATTGAAATAAATATAA+TGG | - | chr3.4:89422458-89422477 | None:intergenic | 20.0% |
| !! | CCATTATATTTATTTCAATG+TGG | + | chr3.4:89422455-89422474 | MS.gene054633:intron | 20.0% |
| !! | CTATTATATATGTTATGTTG+AGG | + | chr3.4:89421762-89421781 | MS.gene054633:intron | 20.0% |
| !! | GTAAATAATCTAATATAGGT+GGG | - | chr3.4:89420871-89420890 | None:intergenic | 20.0% |
| !! | TACCGTAAATAATCTAATAT+AGG | - | chr3.4:89420875-89420894 | None:intergenic | 20.0% |
| !! | TATATTTATTTCAATGTGGA+GGG | + | chr3.4:89422459-89422478 | MS.gene054633:intron | 20.0% |
| !! | TTATATTTATTTCAATGTGG+AGG | + | chr3.4:89422458-89422477 | MS.gene054633:intron | 20.0% |
| !!! | ATAAATAGGAGTATTGAAAA+AGG | - | chr3.4:89422383-89422402 | None:intergenic | 20.0% |
| !!! | ATTAACATTCTCTCTTTTAA+TGG | - | chr3.4:89420388-89420407 | None:intergenic | 20.0% |
| !!! | GAAAATGTAATGAATTTTTC+TGG | - | chr3.4:89420445-89420464 | None:intergenic | 20.0% |
| !!! | TAAATAGGAGTATTGAAAAA+GGG | - | chr3.4:89422382-89422401 | None:intergenic | 20.0% |
| !!! | TATTCATTGATTAACATATG+TGG | - | chr3.4:89422618-89422637 | None:intergenic | 20.0% |
| !!! | TCTATTTCTAGGTATTTTAA+CGG | - | chr3.4:89419541-89419560 | None:intergenic | 20.0% |
| ! | AAAGATAAAATGGTGAATGT+GGG | - | chr3.4:89419461-89419480 | None:intergenic | 25.0% |
| ! | AAGAGATACAAAATTTGAGT+TGG | - | chr3.4:89421484-89421503 | None:intergenic | 25.0% |
| ! | ATAATGAGATTGCTAACTAT+AGG | - | chr3.4:89422594-89422613 | None:intergenic | 25.0% |
| ! | ATGTTAATCAATGAATAGTG+TGG | + | chr3.4:89422621-89422640 | MS.gene054633:intron | 25.0% |
| ! | ATTAGATTATTTACGGTATC+TGG | + | chr3.4:89420877-89420896 | MS.gene054633:intron | 25.0% |
| ! | CGAATAAAATTATGTCATTC+TGG | + | chr3.4:89421803-89421822 | MS.gene054633:intron | 25.0% |
| ! | CGTAAATAATCTAATATAGG+TGG | - | chr3.4:89420872-89420891 | None:intergenic | 25.0% |
| ! | CTTTATAAACGAAAACACAT+AGG | - | chr3.4:89421626-89421645 | None:intergenic | 25.0% |
| ! | GAATATAGCACGATTAAATA+TGG | - | chr3.4:89422266-89422285 | None:intergenic | 25.0% |
| ! | TACATTATTAGAGTGAATGA+GGG | + | chr3.4:89422667-89422686 | MS.gene054633:CDS | 25.0% |
| ! | TACCTAGAAATAGAATTTCA+AGG | + | chr3.4:89419547-89419566 | MS.gene054633:CDS | 25.0% |
| ! | TGAAGAAAGAAAATTGACAT+TGG | - | chr3.4:89420531-89420550 | None:intergenic | 25.0% |
| ! | TGTCTATTGTATGTTAGTAT+GGG | + | chr3.4:89420699-89420718 | MS.gene054633:intron | 25.0% |
| ! | TTGTCTATTGTATGTTAGTA+TGG | + | chr3.4:89420698-89420717 | MS.gene054633:intron | 25.0% |
| !! | AACCTTGAAATTCTATTTCT+AGG | - | chr3.4:89419552-89419571 | None:intergenic | 25.0% |
| !! | AATGTAATGAATTTTTCTGG+TGG | - | chr3.4:89420442-89420461 | None:intergenic | 25.0% |
| !! | CATTTTGTATGTATAAATGC+TGG | + | chr3.4:89420012-89420031 | MS.gene054633:intron | 25.0% |
| !! | GTTCAACAAAATCTTGTTTA+AGG | + | chr3.4:89420771-89420790 | MS.gene054633:intron | 25.0% |
| !!! | AGTTCACTTTTTTATTACTG+TGG | + | chr3.4:89419903-89419922 | MS.gene054633:intron | 25.0% |
| !!! | ATAAATGCTGGTTTTGTTAT+TGG | + | chr3.4:89420024-89420043 | MS.gene054633:intron | 25.0% |
| !!! | ATATTTTTTGTGTGTAGATG+TGG | + | chr3.4:89419645-89419664 | MS.gene054633:intron | 25.0% |
| AAAACCTATACTACTCTCTA+TGG | + | chr3.4:89420480-89420499 | MS.gene054633:intron | 30.0% | |
| AACATTCGTTGTAACTACTT+TGG | + | chr3.4:89420629-89420648 | MS.gene054633:intron | 30.0% | |
| AATGCTTCCATTGAGTAAAA+AGG | - | chr3.4:89420220-89420239 | None:intergenic | 30.0% | |
| AATTTATTTGTACAAGGCTC+TGG | - | chr3.4:89421863-89421882 | None:intergenic | 30.0% | |
| ACATTCGTTGTAACTACTTT+GGG | + | chr3.4:89420630-89420649 | MS.gene054633:intron | 30.0% | |
| AGATGAATGTTATATGCATG+TGG | + | chr3.4:89422335-89422354 | MS.gene054633:intron | 30.0% | |
| AGGTACTTGAAAAAGAGTAA+CGG | - | chr3.4:89420144-89420163 | None:intergenic | 30.0% | |
| AGTGATGACTTTAATTGATG+AGG | + | chr3.4:89422050-89422069 | MS.gene054633:CDS | 30.0% | |
| ATGACTTTAATTGATGAGGA+TGG | + | chr3.4:89422054-89422073 | MS.gene054633:CDS | 30.0% | |
| ATGCTTCCATTGAGTAAAAA+GGG | - | chr3.4:89420219-89420238 | None:intergenic | 30.0% | |
| CATTTCCATGGACTTAAAAT+AGG | - | chr3.4:89421337-89421356 | None:intergenic | 30.0% | |
| GAAAGATAAAATGGTGAATG+TGG | - | chr3.4:89419462-89419481 | None:intergenic | 30.0% | |
| GCATTCAAAGCAATAACTAA+AGG | - | chr3.4:89420164-89420183 | None:intergenic | 30.0% | |
| GCTAGTTGTATTGAATTGAA+AGG | - | chr3.4:89421894-89421913 | None:intergenic | 30.0% | |
| GGAAGAAAATCAAAAGAGAA+TGG | + | chr3.4:89419254-89419273 | MS.gene054633:CDS | 30.0% | |
| GTACATTATTAGAGTGAATG+AGG | + | chr3.4:89422666-89422685 | MS.gene054633:CDS | 30.0% | |
| TATATGCATGTGGCTAATAA+TGG | + | chr3.4:89422345-89422364 | MS.gene054633:intron | 30.0% | |
| TGACTTTAATTGATGAGGAT+GGG | + | chr3.4:89422055-89422074 | MS.gene054633:CDS | 30.0% | |
| TGGATGATCAGAATCTAAAT+CGG | - | chr3.4:89419763-89419782 | None:intergenic | 30.0% | |
| TTACAGACTTCTTTGTAAAC+AGG | - | chr3.4:89419426-89419445 | None:intergenic | 30.0% | |
| TTTAATCGTGCTATATTCCT+TGG | + | chr3.4:89422268-89422287 | MS.gene054633:intron | 30.0% | |
| ! | AGAGATTAGTTACTGCTAAA+GGG | + | chr3.4:89421827-89421846 | MS.gene054633:intron | 30.0% |
| ! | GAATGTTCTTTTGAATACCA+AGG | - | chr3.4:89422288-89422307 | None:intergenic | 30.0% |
| ! | GGTTGCTAAAATTTTCTTTC+AGG | + | chr3.4:89422642-89422661 | MS.gene054633:intron | 30.0% |
| ! | TTGTAACTACTTTGGGAATT+TGG | + | chr3.4:89420637-89420656 | MS.gene054633:intron | 30.0% |
| ! | TTTTTCCTGCAGAAATGATT+TGG | - | chr3.4:89422012-89422031 | None:intergenic | 30.0% |
| !! | AATGAATTTTTCTGGTGGAA+GGG | - | chr3.4:89420437-89420456 | None:intergenic | 30.0% |
| !! | ATTTGCTTTGGCTTTAAATG+AGG | - | chr3.4:89420929-89420948 | None:intergenic | 30.0% |
| !! | TAATGAATTTTTCTGGTGGA+AGG | - | chr3.4:89420438-89420457 | None:intergenic | 30.0% |
| !! | TTGCTTTGAATGCTTTTCAA+TGG | + | chr3.4:89420171-89420190 | MS.gene054633:intron | 30.0% |
| !!! | GGTTTTGTTATTGGTTTCAA+TGG | + | chr3.4:89420033-89420052 | MS.gene054633:intron | 30.0% |
| AAAGTTAGTAGTCACTAGTC+AGG | - | chr3.4:89420567-89420586 | None:intergenic | 35.0% | |
| AAGCCAAAGCAAATCTTTGT+AGG | + | chr3.4:89420935-89420954 | MS.gene054633:intron | 35.0% | |
| AATAAACAGAGTTCAAGCCA+TGG | - | chr3.4:89420063-89420082 | None:intergenic | 35.0% | |
| AATGCTCCCATTGAATAAAG+GGG | - | chr3.4:89420286-89420305 | None:intergenic | 35.0% | |
| ACTTAAGTCTATAGCTCACA+TGG | + | chr3.4:89421240-89421259 | MS.gene054633:intron | 35.0% | |
| AGAATGCTCCCATTGAATAA+AGG | - | chr3.4:89420288-89420307 | None:intergenic | 35.0% | |
| AGATAGAAAACACACCACAA+AGG | + | chr3.4:89421271-89421290 | MS.gene054633:intron | 35.0% | |
| ATTGCTCATAACCTTGTTGA+TGG | + | chr3.4:89422144-89422163 | MS.gene054633:CDS | 35.0% | |
| GAATGCTCCCATTGAATAAA+GGG | - | chr3.4:89420287-89420306 | None:intergenic | 35.0% | |
| GACTTTAATTGATGAGGATG+GGG | + | chr3.4:89422056-89422075 | MS.gene054633:CDS | 35.0% | |
| TAAAATGGTGAATGTGGGTT+AGG | - | chr3.4:89419456-89419475 | None:intergenic | 35.0% | |
| TCAAGTCCCCTTTATTCAAT+GGG | + | chr3.4:89420277-89420296 | MS.gene054633:intron | 35.0% | |
| TGAGTCTCCAACTACATATT+TGG | + | chr3.4:89422080-89422099 | MS.gene054633:CDS | 35.0% | |
| TGCTTCCATTGAGTAAAAAG+GGG | - | chr3.4:89420218-89420237 | None:intergenic | 35.0% | |
| TTCAAGTCCCCTTTATTCAA+TGG | + | chr3.4:89420276-89420295 | MS.gene054633:intron | 35.0% | |
| TTGCTCATAACCTTGTTGAT+GGG | + | chr3.4:89422145-89422164 | MS.gene054633:CDS | 35.0% | |
| TTGTGAGCCAAATATGTAGT+TGG | - | chr3.4:89422090-89422109 | None:intergenic | 35.0% | |
| TTGTTTGTTCATTCATGCCT+TGG | + | chr3.4:89422225-89422244 | MS.gene054633:intron | 35.0% | |
| ! | AAAATGGTGAATGTGGGTTA+GGG | - | chr3.4:89419455-89419474 | None:intergenic | 35.0% |
| ! | AAGGTTTGTTCTTTCTTCTG+TGG | + | chr3.4:89419566-89419585 | MS.gene054633:intron | 35.0% |
| ! | ACATATTTGGCTCACAAAAC+AGG | + | chr3.4:89422093-89422112 | MS.gene054633:CDS | 35.0% |
| ! | ATCTAATATAGGTGGGTTTC+TGG | - | chr3.4:89420864-89420883 | None:intergenic | 35.0% |
| ! | CAGAGATTAGTTACTGCTAA+AGG | + | chr3.4:89421826-89421845 | MS.gene054633:intron | 35.0% |
| ! | CTTTTCAATGGAAGTTGTTG+AGG | + | chr3.4:89420183-89420202 | MS.gene054633:intron | 35.0% |
| ! | GCTTATGCACTTTTACTGAA+TGG | + | chr3.4:89420090-89420109 | MS.gene054633:intron | 35.0% |
| ! | GTTCCTACAAAGATTTGCTT+TGG | - | chr3.4:89420941-89420960 | None:intergenic | 35.0% |
| ! | TGATTACTTGGGTTAGACTA+GGG | - | chr3.4:89421558-89421577 | None:intergenic | 35.0% |
| ! | TGGTGGATATGATAAGTACA+GGG | + | chr3.4:89419665-89419684 | MS.gene054633:CDS | 35.0% |
| ! | TTATGCCCCTTTTTACTCAA+TGG | + | chr3.4:89420210-89420229 | MS.gene054633:intron | 35.0% |
| ! | TTGGTTTCAATGGTTTTCCA+TGG | + | chr3.4:89420043-89420062 | MS.gene054633:intron | 35.0% |
| !! | AGCATTGACTTGACAAAAGT+TGG | - | chr3.4:89419783-89419802 | None:intergenic | 35.0% |
| !! | ATGAATTTTTCTGGTGGAAG+GGG | - | chr3.4:89420436-89420455 | None:intergenic | 35.0% |
| !!! | TTTTTTGTGTGTAGATGTGG+TGG | + | chr3.4:89419648-89419667 | MS.gene054633:intron | 35.0% |
| AACACATAGGTGTACATCAG+AGG | - | chr3.4:89421613-89421632 | None:intergenic | 40.0% | |
| AACGAGCTCTTTCTTGATAG+GGG | - | chr3.4:89419364-89419383 | None:intergenic | 40.0% | |
| ACAACGAGCTCTTTCTTGAT+AGG | - | chr3.4:89419366-89419385 | None:intergenic | 40.0% | |
| ACCCAAGTTGTAATTGTGAC+TGG | + | chr3.4:89421050-89421069 | MS.gene054633:intron | 40.0% | |
| ACTTCTTTGTAAACAGGAGC+AGG | - | chr3.4:89419420-89419439 | None:intergenic | 40.0% | |
| AGATAGAACACACACCAGAA+AGG | + | chr3.4:89421395-89421414 | MS.gene054633:intron | 40.0% | |
| AGGAACTAACCCACCAAAAT+TGG | + | chr3.4:89420955-89420974 | MS.gene054633:intron | 40.0% | |
| AGGGGCTTGAAAGATTGTAA+CGG | - | chr3.4:89420333-89420352 | None:intergenic | 40.0% | |
| AGTACAGGGATTATTCGAAG+CGG | + | chr3.4:89419679-89419698 | MS.gene054633:CDS | 40.0% | |
| AGTTAAACGCACTGCATTCA+AGG | + | chr3.4:89422188-89422207 | MS.gene054633:CDS | 40.0% | |
| CAACGAGCTCTTTCTTGATA+GGG | - | chr3.4:89419365-89419384 | None:intergenic | 40.0% | |
| CAGGAAAAACCTTCCAAAAC+GGG | + | chr3.4:89422023-89422042 | MS.gene054633:CDS | 40.0% | |
| GCAGGAAAAACCTTCCAAAA+CGG | + | chr3.4:89422022-89422041 | MS.gene054633:CDS | 40.0% | |
| GCCAGTCACAATTACAACTT+GGG | - | chr3.4:89421054-89421073 | None:intergenic | 40.0% | |
| GGTAGATGTGTTAAACACCA+AGG | - | chr3.4:89422245-89422264 | None:intergenic | 40.0% | |
| GTCACAATTACAACTTGGGT+TGG | - | chr3.4:89421050-89421069 | None:intergenic | 40.0% | |
| GTGTGTGTGTGTGATTACTT+GGG | - | chr3.4:89421569-89421588 | None:intergenic | 40.0% | |
| TAACCCACCAAAATTGGCAT+TGG | + | chr3.4:89420961-89420980 | MS.gene054633:intron | 40.0% | |
| TAGAATGGAAGCAATGGAGA+AGG | + | chr3.4:89419722-89419741 | MS.gene054633:CDS | 40.0% | |
| TAGAGTGAATGAGGGTAAAC+AGG | + | chr3.4:89422675-89422694 | MS.gene054633:CDS | 40.0% | |
| TGCATTCTTTGCTTCCTTTC+TGG | - | chr3.4:89421412-89421431 | None:intergenic | 40.0% | |
| TGCATTCTTTGCTTCCTTTG+TGG | - | chr3.4:89421288-89421307 | None:intergenic | 40.0% | |
| TGCCAGTCACAATTACAACT+TGG | - | chr3.4:89421055-89421074 | None:intergenic | 40.0% | |
| TGCTCATAACCTTGTTGATG+GGG | + | chr3.4:89422146-89422165 | MS.gene054633:CDS | 40.0% | |
| TGTGTGTGTGTGTGATTACT+TGG | - | chr3.4:89421570-89421589 | None:intergenic | 40.0% | |
| ! | AGTGTGTTACTGTTGAGTGA+GGG | - | chr3.4:89421521-89421540 | None:intergenic | 40.0% |
| ! | ATTCCCTCCAATGCCAATTT+TGG | - | chr3.4:89420971-89420990 | None:intergenic | 40.0% |
| ! | GTGATTACTTGGGTTAGACT+AGG | - | chr3.4:89421559-89421578 | None:intergenic | 40.0% |
| ! | TCCTGCAGAAATGATTTGGA+AGG | - | chr3.4:89422008-89422027 | None:intergenic | 40.0% |
| ! | TGCTGTTAGCTTGAAACCTT+GGG | - | chr3.4:89421022-89421041 | None:intergenic | 40.0% |
| ! | TTAAAGCATCCCCATCAACA+AGG | - | chr3.4:89422158-89422177 | None:intergenic | 40.0% |
| !! | GTGGTGGATATGATAAGTAC+AGG | + | chr3.4:89419664-89419683 | MS.gene054633:CDS | 40.0% |
| !! | TCGCACCTATTTTAAGTCCA+TGG | + | chr3.4:89421329-89421348 | MS.gene054633:intron | 40.0% |
| !!! | AAGGTGAGGGTTTTGAAATG+GGG | - | chr3.4:89419329-89419348 | None:intergenic | 40.0% |
| !!! | GAAGGTGAGGGTTTTGAAAT+GGG | - | chr3.4:89419330-89419349 | None:intergenic | 40.0% |
| ACGCACAGTTGCTTGCTTAT+CGG | + | chr3.4:89420820-89420839 | MS.gene054633:intron | 45.0% | |
| ATCCACCAGTGACATGAGAT+TGG | - | chr3.4:89419806-89419825 | None:intergenic | 45.0% | |
| ATGAAAACCGAGACCTTGAG+AGG | + | chr3.4:89420989-89421008 | MS.gene054633:intron | 45.0% | |
| ATGCTCCAATCTCATGTCAC+TGG | + | chr3.4:89419798-89419817 | MS.gene054633:CDS | 45.0% | |
| CACAAAACAGGACTTAGTGC+TGG | + | chr3.4:89422105-89422124 | MS.gene054633:CDS | 45.0% | |
| CGAAGCTAGAATGGAAGCAA+TGG | + | chr3.4:89419716-89419735 | MS.gene054633:CDS | 45.0% | |
| CGCTCCATAGAGAGTAGTAT+AGG | - | chr3.4:89420487-89420506 | None:intergenic | 45.0% | |
| GCCTTCCAAATCATTTCTGC+AGG | + | chr3.4:89422004-89422023 | MS.gene054633:CDS | 45.0% | |
| GGGGACTTGAAAGATTGTAG+CGG | - | chr3.4:89420267-89420286 | None:intergenic | 45.0% | |
| GTAAACAGGAGCAGGCATAT+TGG | - | chr3.4:89419412-89419431 | None:intergenic | 45.0% | |
| GTACAGGGATTATTCGAAGC+GGG | + | chr3.4:89419680-89419699 | MS.gene054633:CDS | 45.0% | |
| GTGAAGTGATTGAGAGAGCT+TGG | - | chr3.4:89419295-89419314 | None:intergenic | 45.0% | |
| GTGTGAGCTATCAACTCACA+AGG | - | chr3.4:89421365-89421384 | None:intergenic | 45.0% | |
| TATTTACGGTATCTGGCCCA+AGG | + | chr3.4:89420884-89420903 | MS.gene054633:intron | 45.0% | |
| TTAGAACAGCACACAGCACA+TGG | - | chr3.4:89422429-89422448 | None:intergenic | 45.0% | |
| TTTGGCATGCCTCAACAACA+GGG | + | chr3.4:89421982-89422001 | MS.gene054633:intron | 45.0% | |
| ! | AAACAGGACTTAGTGCTGGA+TGG | + | chr3.4:89422109-89422128 | MS.gene054633:CDS | 45.0% |
| ! | CCACCAAAATTGGCATTGGA+GGG | + | chr3.4:89420965-89420984 | MS.gene054633:intron | 45.0% |
| ! | CTCGTTGTTGTTCGAAGATC+CGG | + | chr3.4:89419378-89419397 | MS.gene054633:CDS | 45.0% |
| ! | GAGTGTGTTACTGTTGAGTG+AGG | - | chr3.4:89421522-89421541 | None:intergenic | 45.0% |
| ! | GCTGTTAGCTTGAAACCTTG+GGG | - | chr3.4:89421021-89421040 | None:intergenic | 45.0% |
| ! | GTGCTGTTAGCTTGAAACCT+TGG | - | chr3.4:89421023-89421042 | None:intergenic | 45.0% |
| ! | TTTTGGCATGCCTCAACAAC+AGG | + | chr3.4:89421981-89422000 | MS.gene054633:intron | 45.0% |
| !! | AATTACAACTTGGGTTGGCC+TGG | - | chr3.4:89421045-89421064 | None:intergenic | 45.0% |
| !! | CACAAGGAAGAGCATTTCCA+TGG | - | chr3.4:89421349-89421368 | None:intergenic | 45.0% |
| !! | CCTCCAATGCCAATTTTGGT+GGG | - | chr3.4:89420967-89420986 | None:intergenic | 45.0% |
| !! | TGCTTCCATTCTAGCTTCGT+CGG | - | chr3.4:89419715-89419734 | None:intergenic | 45.0% |
| !!! | AGGTGAGGGTTTTGAAATGG+GGG | - | chr3.4:89419328-89419347 | None:intergenic | 45.0% |
| !!! | GGAAGGTGAGGGTTTTGAAA+TGG | - | chr3.4:89419331-89419350 | None:intergenic | 45.0% |
| AAGGACCGACTAATTCGAGG+GGG | + | chr3.4:89420903-89420922 | MS.gene054633:intron | 50.0% | |
| ACACACACACACACACACAC+GGG | + | chr3.4:89421577-89421596 | MS.gene054633:intron | 50.0% | |
| CAAGGACCGACTAATTCGAG+GGG | + | chr3.4:89420902-89420921 | MS.gene054633:intron | 50.0% | |
| CACACACACACACACACACA+CGG | + | chr3.4:89421576-89421595 | MS.gene054633:intron | 50.0% | |
| CCAAGGACCGACTAATTCGA+GGG | + | chr3.4:89420901-89420920 | MS.gene054633:intron | 50.0% | |
| CCTCGAATTAGTCGGTCCTT+GGG | - | chr3.4:89420903-89420922 | None:intergenic | 50.0% | |
| CTCCAATCTCATGTCACTGG+TGG | + | chr3.4:89419801-89419820 | MS.gene054633:CDS | 50.0% | |
| GGTTTCAAGCTAACAGCACC+AGG | + | chr3.4:89421024-89421043 | MS.gene054633:intron | 50.0% | |
| TTTGGAAGGCCCTGTTGTTG+AGG | - | chr3.4:89421994-89422013 | None:intergenic | 50.0% | |
| ! | CCCACCAAAATTGGCATTGG+AGG | + | chr3.4:89420964-89420983 | MS.gene054633:intron | 50.0% |
| ! | CCCTCCAATGCCAATTTTGG+TGG | - | chr3.4:89420968-89420987 | None:intergenic | 50.0% |
| ! | GTCATCACTTCGTCCCGTTT+TGG | - | chr3.4:89422039-89422058 | None:intergenic | 50.0% |
| ! | TCTTTCTTGATAGGGGTGCG+AGG | - | chr3.4:89419357-89419376 | None:intergenic | 50.0% |
| !! | CTCATGTCACTGGTGGATTC+TGG | + | chr3.4:89419808-89419827 | MS.gene054633:CDS | 50.0% |
| !! | GGTGAATGTGGGTTAGGGTT+TGG | - | chr3.4:89419450-89419469 | None:intergenic | 50.0% |
| !! | TCACTTCGTCCCGTTTTGGA+AGG | - | chr3.4:89422035-89422054 | None:intergenic | 50.0% |
| !! | TTTTCTGGTGGAAGGGGAGA+GGG | - | chr3.4:89420430-89420449 | None:intergenic | 50.0% |
| !! | TTTTTCTGGTGGAAGGGGAG+AGG | - | chr3.4:89420431-89420450 | None:intergenic | 50.0% |
| ACACACACACACACACGGGT+TGG | + | chr3.4:89421583-89421602 | MS.gene054633:intron | 55.0% | |
| AGGCATATTGGCGACACGAC+CGG | - | chr3.4:89419400-89419419 | None:intergenic | 55.0% | |
| CCCAAGGACCGACTAATTCG+AGG | + | chr3.4:89420900-89420919 | MS.gene054633:intron | 55.0% | |
| CCCTCGAATTAGTCGGTCCT+TGG | - | chr3.4:89420904-89420923 | None:intergenic | 55.0% | |
| GTGCGAGGTTTGGAAGGTGA+GGG | - | chr3.4:89419342-89419361 | None:intergenic | 55.0% | |
| GTGTGCTCCTCTCAAGGTCT+CGG | - | chr3.4:89420999-89421018 | None:intergenic | 55.0% | |
| TGAGGCCCCCTCGAATTAGT+CGG | - | chr3.4:89420911-89420930 | None:intergenic | 55.0% | |
| TGCGTCCGACGAAGCTAGAA+TGG | + | chr3.4:89419707-89419726 | MS.gene054633:CDS | 55.0% | |
| ! | ATAGGGGTGCGAGGTTTGGA+AGG | - | chr3.4:89419348-89419367 | None:intergenic | 55.0% |
| ! | CTTGATAGGGGTGCGAGGTT+TGG | - | chr3.4:89419352-89419371 | None:intergenic | 55.0% |
| ! | GGACTTAGTGCTGGATGGAG+AGG | + | chr3.4:89422114-89422133 | MS.gene054633:CDS | 55.0% |
| ! | TTTCTGGTGGAAGGGGAGAG+GGG | - | chr3.4:89420429-89420448 | None:intergenic | 55.0% |
| !! | TGTCACTGGTGGATTCTGGC+TGG | + | chr3.4:89419812-89419831 | MS.gene054633:CDS | 55.0% |
| CTTGGGGTGTGCTCCTCTCA+AGG | - | chr3.4:89421005-89421024 | None:intergenic | 60.0% | |
| GGTGCGAGGTTTGGAAGGTG+AGG | - | chr3.4:89419343-89419362 | None:intergenic | 60.0% | |
| ! | CTTGAGAGGAGCACACCCCA+AGG | + | chr3.4:89421003-89421022 | MS.gene054633:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 89419252 | 89422705 | 89419252 | ID=MS.gene054633 |
| chr3.4 | mRNA | 89419252 | 89422705 | 89419252 | ID=MS.gene054633.t1;Parent=MS.gene054633 |
| chr3.4 | exon | 89419252 | 89419437 | 89419252 | ID=MS.gene054633.t1.exon1;Parent=MS.gene054633.t1 |
| chr3.4 | CDS | 89419252 | 89419437 | 89419252 | ID=cds.MS.gene054633.t1;Parent=MS.gene054633.t1 |
| chr3.4 | exon | 89419525 | 89419568 | 89419525 | ID=MS.gene054633.t1.exon2;Parent=MS.gene054633.t1 |
| chr3.4 | CDS | 89419525 | 89419568 | 89419525 | ID=cds.MS.gene054633.t1;Parent=MS.gene054633.t1 |
| chr3.4 | exon | 89419662 | 89419833 | 89419662 | ID=MS.gene054633.t1.exon3;Parent=MS.gene054633.t1 |
| chr3.4 | CDS | 89419662 | 89419833 | 89419662 | ID=cds.MS.gene054633.t1;Parent=MS.gene054633.t1 |
| chr3.4 | exon | 89422003 | 89422209 | 89422003 | ID=MS.gene054633.t1.exon4;Parent=MS.gene054633.t1 |
| chr3.4 | CDS | 89422003 | 89422209 | 89422003 | ID=cds.MS.gene054633.t1;Parent=MS.gene054633.t1 |
| chr3.4 | exon | 89422664 | 89422705 | 89422664 | ID=MS.gene054633.t1.exon5;Parent=MS.gene054633.t1 |
| chr3.4 | CDS | 89422664 | 89422705 | 89422664 | ID=cds.MS.gene054633.t1;Parent=MS.gene054633.t1 |
| Gene Sequence |
| Protein sequence |
