AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42534

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42534.t1 MTR_7g091390 97.122 417 9 1 1 417 1 414 0.0 840
MS.gene42534.t1 MTR_7g091390 97.222 324 9 0 94 417 3 326 0.0 659
MS.gene42534.t1 MTR_4g130270 55.615 187 72 3 42 218 32 217 3.15e-63 207
MS.gene42534.t1 MTR_7g009410 50.802 187 78 4 42 218 50 232 2.69e-55 187
MS.gene42534.t1 MTR_8g044070 57.229 166 62 3 24 183 21 183 1.78e-54 186
MS.gene42534.t1 MTR_4g127930 63.359 131 43 1 55 180 157 287 6.87e-54 187
MS.gene42534.t1 MTR_2g460730 44.649 271 118 8 49 298 39 298 1.97e-53 182
MS.gene42534.t1 MTR_6g011490 52.688 186 74 4 43 218 47 228 5.65e-53 181
MS.gene42534.t1 MTR_5g015070 64.885 131 41 1 55 180 247 377 5.62e-52 182
MS.gene42534.t1 MTR_7g080460 64.122 131 42 1 55 180 257 387 1.23e-51 184
MS.gene42534.t1 MTR_8g468920 43.345 293 127 9 46 312 58 337 1.67e-51 178
MS.gene42534.t1 MTR_4g065370 56.552 145 58 1 41 180 147 291 6.55e-51 180
MS.gene42534.t1 MTR_2g098180 60.305 131 47 1 55 180 165 295 4.68e-50 177
MS.gene42534.t1 MTR_8g068510 59.420 138 48 2 48 180 122 256 1.06e-49 173
MS.gene42534.t1 MTR_5g031880 62.595 131 41 2 55 180 222 349 3.88e-49 174
MS.gene42534.t1 MTR_8g020510 56.944 144 54 2 42 180 233 373 1.90e-47 171
MS.gene42534.t1 MTR_4g097520 62.595 131 41 2 55 180 308 435 2.92e-47 172
MS.gene42534.t1 MTR_3g103460 57.237 152 54 3 36 179 286 434 5.03e-47 171
MS.gene42534.t1 MTR_1g017400 62.595 131 41 2 55 180 310 437 1.11e-46 170
MS.gene42534.t1 MTR_4g007770 53.333 180 70 4 49 218 28 203 1.15e-46 163
MS.gene42534.t1 MTR_8g044040 62.500 136 43 2 53 183 52 184 1.77e-45 162
MS.gene42534.t1 MTR_4g061200 48.529 136 53 3 61 192 132 254 7.41e-26 108
MS.gene42534.t1 MTR_4g061200 48.529 136 53 3 61 192 132 254 3.88e-25 107
MS.gene42534.t1 MTR_4g061200 50.407 123 47 2 61 179 132 244 8.27e-25 105
MS.gene42534.t1 MTR_7g100590 47.794 136 54 3 61 192 140 262 1.11e-24 105
MS.gene42534.t1 MTR_4g061200 50.407 123 47 2 61 179 132 244 4.25e-24 104
MS.gene42534.t1 MTR_2g093060 47.059 136 55 3 61 192 135 257 6.77e-24 103
MS.gene42534.t1 MTR_2g093060 47.059 136 55 3 61 192 135 257 6.98e-24 103
MS.gene42534.t1 MTR_4g094868 46.324 136 56 3 61 192 177 299 8.91e-24 103
MS.gene42534.t1 MTR_4g094868 46.324 136 56 3 61 192 177 299 9.20e-24 103
MS.gene42534.t1 MTR_5g016810 46.324 136 56 3 61 192 153 275 1.89e-23 102
MS.gene42534.t1 MTR_5g016810 46.212 132 57 2 61 188 153 274 5.27e-23 101
MS.gene42534.t1 MTR_2g093060 48.780 123 49 2 61 179 135 247 6.59e-23 100
MS.gene42534.t1 MTR_4g094868 47.170 106 49 2 91 192 41 143 9.54e-17 81.6
MS.gene42534.t1 MTR_1g049140 49.074 108 44 2 57 164 134 230 1.84e-16 79.0
MS.gene42534.t1 MTR_1g049140 49.074 108 44 2 57 164 134 230 2.94e-16 80.1
MS.gene42534.t1 MTR_1g049140 49.074 108 44 2 57 164 134 230 5.33e-16 79.0
MS.gene42534.t1 MTR_7g061190 42.169 83 41 2 114 192 25 104 3.15e-14 70.5
MS.gene42534.t1 MTR_3g090510 43.243 111 53 3 98 204 163 267 5.21e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42534.t1 AT2G41710 65.602 407 121 7 18 417 28 422 3.02e-178 504
MS.gene42534.t1 AT2G41710 64.806 412 121 8 18 417 28 427 1.51e-175 497
MS.gene42534.t1 AT2G41710 65.423 402 117 8 18 409 28 417 1.02e-173 494
MS.gene42534.t1 AT2G41710 60.407 442 121 8 18 417 28 457 1.06e-170 486
MS.gene42534.t1 AT3G54320 70.588 136 35 1 53 183 58 193 4.53e-62 206
MS.gene42534.t1 AT3G54320 70.588 136 35 1 53 183 58 193 5.63e-62 206
MS.gene42534.t1 AT1G51190 64.885 131 41 1 55 180 185 315 2.73e-54 189
MS.gene42534.t1 AT5G57390 64.122 131 42 1 55 180 80 210 1.01e-53 185
MS.gene42534.t1 AT5G65510 57.237 152 56 2 34 180 151 298 3.03e-53 180
MS.gene42534.t1 AT5G57390 64.615 130 41 1 55 179 198 327 8.51e-53 185
MS.gene42534.t1 AT3G20840 61.832 131 45 1 55 180 176 306 4.83e-52 183
MS.gene42534.t1 AT1G72570 56.944 144 57 1 42 180 205 348 5.74e-52 179
MS.gene42534.t1 AT5G65510 57.237 152 56 2 34 180 151 298 6.16e-52 180
MS.gene42534.t1 AT5G17430 64.122 131 42 1 55 180 143 273 9.11e-52 182
MS.gene42534.t1 AT5G65510 57.237 152 56 2 34 180 209 356 1.06e-51 181
MS.gene42534.t1 AT5G65510 57.237 152 56 2 34 180 209 356 1.06e-51 181
MS.gene42534.t1 AT5G17430 64.122 131 42 1 55 180 205 335 1.59e-51 182
MS.gene42534.t1 AT1G79700 63.087 149 50 1 40 183 32 180 2.12e-50 172
MS.gene42534.t1 AT5G10510 61.069 131 46 1 55 180 225 355 3.37e-50 178
MS.gene42534.t1 AT5G10510 61.069 131 46 1 55 180 225 355 3.37e-50 178
MS.gene42534.t1 AT4G37750 54.037 161 63 2 31 180 248 408 4.33e-50 178
MS.gene42534.t1 AT5G10510 61.069 131 46 1 55 180 248 378 7.05e-50 177
MS.gene42534.t1 AT5G10510 61.069 131 46 1 55 180 263 393 8.33e-50 177
MS.gene42534.t1 AT5G10510 61.069 131 46 1 55 180 263 393 8.33e-50 177
MS.gene42534.t1 AT1G16060 61.905 147 51 1 42 183 40 186 8.91e-50 172
MS.gene42534.t1 AT1G79700 64.789 142 45 1 41 177 33 174 3.79e-49 169
MS.gene42534.t1 AT5G10510 58.779 131 46 2 55 180 225 352 8.44e-46 166
MS.gene42534.t1 AT5G10510 50.993 151 49 2 55 180 263 413 4.60e-43 159
MS.gene42534.t1 AT3G54320 65.263 95 28 1 94 183 33 127 2.72e-34 131
MS.gene42534.t1 AT3G54320 65.263 95 28 1 94 183 33 127 2.72e-34 131
MS.gene42534.t1 AT2G39250 49.541 109 45 1 61 169 109 207 5.13e-27 108
MS.gene42534.t1 AT2G28550 44.000 150 67 3 61 206 154 290 8.76e-27 110
MS.gene42534.t1 AT2G39250 49.541 109 45 1 61 169 109 207 2.14e-26 108
MS.gene42534.t1 AT1G79700 63.158 95 30 1 94 183 10 104 1.58e-24 101
MS.gene42534.t1 AT2G28550 49.593 123 48 2 61 179 154 266 1.77e-24 102
MS.gene42534.t1 AT2G28550 49.593 123 48 2 61 179 154 266 1.77e-24 102
MS.gene42534.t1 AT2G28550 47.794 136 54 3 61 192 154 276 4.81e-24 104
MS.gene42534.t1 AT4G36920 46.324 136 56 3 61 192 132 254 1.20e-23 102
MS.gene42534.t1 AT4G36920 46.324 136 56 3 61 192 132 254 1.20e-23 102
MS.gene42534.t1 AT5G67180 43.448 145 65 3 61 201 97 228 2.03e-23 99.0
MS.gene42534.t1 AT1G16060 59.794 97 34 1 92 183 20 116 3.04e-23 99.0
MS.gene42534.t1 AT5G67180 45.588 136 57 3 61 192 97 219 3.97e-23 99.0
MS.gene42534.t1 AT2G28550 49.593 123 48 2 61 179 154 266 4.34e-23 101
MS.gene42534.t1 AT5G67180 45.588 136 57 3 61 192 97 219 6.87e-23 97.8
MS.gene42534.t1 AT1G79700 61.290 93 31 1 96 183 6 98 9.76e-23 96.3
MS.gene42534.t1 AT5G67180 45.588 136 57 3 61 192 97 219 1.18e-22 98.6
MS.gene42534.t1 AT5G60120 47.656 128 53 2 57 180 157 274 3.56e-22 98.2
MS.gene42534.t1 AT5G60120 47.656 128 53 2 57 180 157 274 3.56e-22 98.2
MS.gene42534.t1 AT5G60120 47.656 128 53 2 57 180 157 274 3.56e-22 98.2
MS.gene42534.t1 AT5G60120 47.656 128 53 2 57 180 157 274 5.23e-22 98.2
MS.gene42534.t1 AT5G60120 47.656 128 53 2 57 180 157 274 5.48e-22 98.2
MS.gene42534.t1 AT5G60120 47.656 128 53 2 57 180 157 274 6.44e-22 98.2
MS.gene42534.t1 AT3G54990 50.467 107 43 1 61 167 123 219 4.14e-21 92.4
MS.gene42534.t1 AT3G54990 50.467 107 43 1 61 167 123 219 1.35e-20 92.8
MS.gene42534.t1 AT2G28550 47.778 90 43 1 94 179 11 100 1.02e-13 71.6
MS.gene42534.t1 AT3G54320 57.692 52 17 1 137 183 1 52 9.23e-11 62.8

Find 99 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTGCTGCTCTGAAATAT+TGG 0.236770 7.1:+16146839 MS.gene42534:CDS
TTACAAACATTGAAGGTATA+GGG 0.252605 7.1:+16147993 MS.gene42534:intron
GTCGTTATGAAGCGCATCTA+TGG 0.312719 7.1:+16146480 MS.gene42534:CDS
CCTTGCTGCTCTGAAATATT+GGG 0.335890 7.1:+16146840 MS.gene42534:CDS
TGTGGTGATGGCAGTATACT+TGG 0.356648 7.1:+16146658 MS.gene42534:intron
TACTTCAGTAGTATACATTA+TGG 0.365309 7.1:+16147817 MS.gene42534:CDS
GTAGATGGAGCTGCGTTTAC+CGG 0.376066 7.1:-16146159 None:intergenic
CCTGGTGACACCACGGTAGA+TGG 0.379423 7.1:-16146174 None:intergenic
GCTCTGAAATATTGGGGTCC+TGG 0.386290 7.1:+16146847 MS.gene42534:CDS
GATGTCTCCGCAGACTTGCC+TGG 0.389093 7.1:-16146020 None:intergenic
GATAATCTTGTTCCAGCATC+AGG 0.401334 7.1:-16148121 None:intergenic
CCTAACTCTGGCATCTTGTA+TGG 0.401574 7.1:-16148223 None:intergenic
CTCTGAAATATTGGGGTCCT+GGG 0.403135 7.1:+16146848 MS.gene42534:CDS
CATTGGATCAACAGTGTTGT+AGG 0.410420 7.1:-16148554 None:intergenic
AAACATAGTGTAGGTTGAAT+CGG 0.419840 7.1:-16149737 None:intergenic
ATTTAACAAATCACATCAAA+TGG 0.429612 7.1:+16148074 MS.gene42534:CDS
CCATCATATGGTCGAATGGC+TGG 0.434411 7.1:+16147787 MS.gene42534:CDS
TCTTGTATGGTTCTGTCGGT+TGG 0.439420 7.1:-16148210 None:intergenic
CAATGGTAGATCCTGCTCTC+TGG 0.448245 7.1:+16148572 MS.gene42534:CDS
CCATACAAGATGCCAGAGTT+AGG 0.449780 7.1:+16148223 MS.gene42534:CDS
GCTTCGTCTTCCTCCGATCC+AGG 0.465220 7.1:+16146002 MS.gene42534:CDS
TTGCTGCCATCATGATTTGA+AGG 0.466238 7.1:-16148433 None:intergenic
CAAAATATCGTGGACTCTCC+AGG 0.470890 7.1:+16147493 MS.gene42534:CDS
AAGAATACCTTGCGTCTTTG+CGG 0.473231 7.1:+16147371 MS.gene42534:CDS
GTGTGTGTATTAGGCATAGA+TGG 0.475086 7.1:+16146453 MS.gene42534:intron
GCGGAAAGTGAATATGTTAG+TGG 0.475751 7.1:+16148028 MS.gene42534:CDS
ATGAGAGATGTCCAGAGAGC+AGG 0.478776 7.1:-16148583 None:intergenic
TTACTGTGAACTTAAAACAT+TGG 0.484291 7.1:+16148177 MS.gene42534:CDS
AGACTGTGACAATATACTTA+AGG 0.496868 7.1:-16148290 None:intergenic
CTCCGCAGACTTGCCTGGAT+CGG 0.504022 7.1:-16146015 None:intergenic
AACATAGTGTAGGTTGAATC+GGG 0.509559 7.1:-16149736 None:intergenic
AAGAATCGACAACCTGATGC+TGG 0.510545 7.1:+16148109 MS.gene42534:CDS
CTCAGATGTATGAGAAAGGC+CGG 0.512027 7.1:-16148620 None:intergenic
AACAAATCACATCAAATGGT+GGG 0.514951 7.1:+16148078 MS.gene42534:CDS
CCATCTACCGTGGTGTCACC+AGG 0.516365 7.1:+16146174 MS.gene42534:CDS
AGAAAGGCCGGCAGGAAGCA+TGG 0.520929 7.1:-16148608 None:intergenic
GGCATCTTGTATGGTTCTGT+CGG 0.520968 7.1:-16148214 None:intergenic
AATCAAAATCAGAATAAGAA+AGG 0.521721 7.1:+16146518 MS.gene42534:CDS
GATAGGGGCGTATGATGATG+AGG 0.523399 7.1:+16146795 MS.gene42534:intron
CTCATTCCCATGCTTCCTGC+CGG 0.523635 7.1:+16148601 MS.gene42534:CDS
TTGTGCAGCGGTCCTAACTC+TGG 0.524572 7.1:-16148235 None:intergenic
CGCAGACTTGCCTGGATCGG+AGG 0.526214 7.1:-16146012 None:intergenic
GATCGACTTGACATTGCAAT+GGG 0.526683 7.1:+16148457 MS.gene42534:CDS
GACATCAGAAGCAGTGGCGG+CGG 0.535185 7.1:+16146037 MS.gene42534:CDS
TACAAACATTGAAGGTATAG+GGG 0.541200 7.1:+16147994 MS.gene42534:intron
CAGACAAGAATGATGTCAAT+GGG 0.541457 7.1:-16148516 None:intergenic
TCGTTATGAAGCGCATCTAT+GGG 0.548483 7.1:+16146481 MS.gene42534:CDS
CTGCGTTTACCGGCGGCACA+CGG 0.551976 7.1:-16146149 None:intergenic
CCAGCCATTCGACCATATGA+TGG 0.556230 7.1:-16147787 None:intergenic
GATGTATGAGAAAGGCCGGC+AGG 0.557024 7.1:-16148616 None:intergenic
CAGAGAGCAGGATCTACCAT+TGG 0.557981 7.1:-16148571 None:intergenic
CTACACTATGTTTCAGCCAC+GGG 0.558537 7.1:+16149747 MS.gene42534:CDS
TAACAAATCACATCAAATGG+TGG 0.563622 7.1:+16148077 MS.gene42534:CDS
AAGAAAGCGAAGAAAGAGAG+AGG 0.564008 7.1:+16146092 MS.gene42534:CDS
CAAGAGCATGCAAGAGAAAG+CGG 0.565366 7.1:+16148321 MS.gene42534:CDS
CAGAATAAGAAAGGAAAACA+AGG 0.566260 7.1:+16146527 MS.gene42534:CDS
AAAATGCCTCCGTGTGCCGC+CGG 0.567788 7.1:+16146140 MS.gene42534:CDS
CGGCCTTTCTCATACATCTG+AGG 0.572707 7.1:+16148621 MS.gene42534:CDS
CAACCTCAGATGTATGAGAA+AGG 0.572731 7.1:-16148624 None:intergenic
TGATCGACTTGACATTGCAA+TGG 0.573444 7.1:+16148456 MS.gene42534:CDS
GGGAAGTTAATGAGAGTCCC+AGG 0.575325 7.1:-16146865 None:intergenic
GAAAGGCCGGCAGGAAGCAT+GGG 0.578721 7.1:-16148607 None:intergenic
GCAGACAAGAATGATGTCAA+TGG 0.579355 7.1:-16148517 None:intergenic
CTACAACACTGTTGATCCAA+TGG 0.582269 7.1:+16148555 MS.gene42534:CDS
GAGAAACCTTCAAATCATGA+TGG 0.583795 7.1:+16148427 MS.gene42534:CDS
GGTGGTATAAATTAGTCGAT+GGG 0.595240 7.1:+16147762 MS.gene42534:intron
CAATGAGTTGGATCGTGGGA+AGG 0.597269 7.1:+16148399 MS.gene42534:CDS
CTTGCTGCTCTGAAATATTG+GGG 0.598020 7.1:+16146841 MS.gene42534:CDS
ATCTATGGGATAAAAGTACA+TGG 0.600414 7.1:+16146495 MS.gene42534:CDS
GGGGCCATCATATGGTCGAA+TGG 0.601072 7.1:+16147783 MS.gene42534:CDS
ACAAATCACATCAAATGGTG+GGG 0.603517 7.1:+16148079 MS.gene42534:CDS
GACATTGCAATGGGAATGAG+TGG 0.603558 7.1:+16148466 MS.gene42534:CDS
ATAGTCAATGAGTTGGATCG+TGG 0.603810 7.1:+16148394 MS.gene42534:CDS
TGTATTAGGCATAGATGGAC+TGG 0.604842 7.1:+16146458 MS.gene42534:intron
TGCGGAGACATCAGAAGCAG+TGG 0.612285 7.1:+16146031 MS.gene42534:CDS
AATACCTTGCGTCTTTGCGG+AGG 0.612438 7.1:+16147374 MS.gene42534:CDS
TAGTCAATGAGTTGGATCGT+GGG 0.613377 7.1:+16148395 MS.gene42534:CDS
CCCAATATTTCAGAGCAGCA+AGG 0.616474 7.1:-16146840 None:intergenic
GTGGTGATGGCAGTATACTT+GGG 0.622929 7.1:+16146659 MS.gene42534:intron
GTGGTATAAATTAGTCGATG+GGG 0.624432 7.1:+16147763 MS.gene42534:intron
CCTACACTATGTTTCAGCCA+CGG 0.629098 7.1:+16149746 MS.gene42534:CDS
CTCCGATCCAGGCAAGTCTG+CGG 0.635318 7.1:+16146013 MS.gene42534:CDS
CGGATGTCCAATCACTCCCG+TGG 0.636413 7.1:-16149763 None:intergenic
CACACCTCCGCAAAGACGCA+AGG 0.641142 7.1:-16147378 None:intergenic
GCTTGATGCAGGAAGAGCAG+TGG 0.645449 7.1:+16147453 MS.gene42534:intron
CGTTTACCGGCGGCACACGG+AGG 0.650287 7.1:-16146146 None:intergenic
GGAGACATCAGAAGCAGTGG+CGG 0.652456 7.1:+16146034 MS.gene42534:CDS
TTATCAGAAGAAAAGAAACA+TGG 0.660718 7.1:+16148139 MS.gene42534:CDS
GATGGAGCTGCGTTTACCGG+CGG 0.662168 7.1:-16146156 None:intergenic
GTGTTGTAGGCTGTCAAAAG+TGG 0.663016 7.1:-16148541 None:intergenic
AGAGGACTATCAAAATATCG+TGG 0.664033 7.1:+16147483 MS.gene42534:CDS
CCGTGGCTGAAACATAGTGT+AGG 0.666827 7.1:-16149746 None:intergenic
GTATGATGATGAGGAAGCAG+CGG 0.671234 7.1:+16146804 MS.gene42534:CDS
ACATTGCAATGGGAATGAGT+GGG 0.685010 7.1:+16148467 MS.gene42534:CDS
TGGTATAAATTAGTCGATGG+GGG 0.691919 7.1:+16147764 MS.gene42534:intron
CTAGGTACCTGGTGACACCA+CGG 0.696451 7.1:-16146181 None:intergenic
TATAGGGGATAATTCAGCTG+CGG 0.697874 7.1:+16148009 MS.gene42534:CDS
AAACGCAGCTCCATCTACCG+TGG 0.712028 7.1:+16146164 MS.gene42534:CDS
CATTGCAATGGGAATGAGTG+GGG 0.722588 7.1:+16148468 MS.gene42534:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAAATTGGTTTATTAT+GGG + chr7.1:16149042-16149061 MS.gene42534:intron 10.0%
!! ACTGTAATTTGAAAAATTAT+TGG - chr7.1:16149433-16149452 None:intergenic 15.0%
!!! AATAAACCAATTTAAAATGT+TGG - chr7.1:16149040-16149059 None:intergenic 15.0%
!!! AATATAATTAATGCAGTTTT+AGG + chr7.1:16149294-16149313 MS.gene42534:intron 15.0%
!!! CATTTTAAATTGGTTTATTA+TGG + chr7.1:16149041-16149060 MS.gene42534:intron 15.0%
!!! TTTTAATGCATTGTTAATAT+TGG + chr7.1:16146739-16146758 MS.gene42534:intron 15.0%
!!! TTTTTCAAATTACAGTTTTA+AGG + chr7.1:16149437-16149456 MS.gene42534:intron 15.0%
!! AAATATGTGAGATATGATTA+TGG - chr7.1:16149343-16149362 None:intergenic 20.0%
!! AATACTAACAGATAAATGAT+TGG - chr7.1:16147113-16147132 None:intergenic 20.0%
!! AATCAAAATCAGAATAAGAA+AGG + chr7.1:16146518-16146537 MS.gene42534:CDS 20.0%
!! ACTAGCATCTATAAAATTAA+AGG - chr7.1:16149110-16149129 None:intergenic 20.0%
!! ATTTAACAAATCACATCAAA+TGG + chr7.1:16148074-16148093 MS.gene42534:CDS 20.0%
!! CATTCAATAAAATATTAGCT+TGG - chr7.1:16147866-16147885 None:intergenic 20.0%
!! TACTTAATTTAGAGATAGTT+TGG + chr7.1:16146915-16146934 MS.gene42534:intron 20.0%
!! TATTAGATTTAGATTCAGTT+TGG + chr7.1:16146248-16146267 MS.gene42534:intron 20.0%
!! TTTGATGAAAAATACAAAAC+AGG - chr7.1:16147006-16147025 None:intergenic 20.0%
!!! AAAAAGCATTAAATGAAAGT+AGG - chr7.1:16148787-16148806 None:intergenic 20.0%
!!! AGTATTTTACTTTATTCACA+AGG + chr7.1:16148660-16148679 MS.gene42534:intron 20.0%
!!! CAAGCTAATATTTTATTGAA+TGG + chr7.1:16147864-16147883 MS.gene42534:intron 20.0%
!!! TATTTGATAACATTCACATT+AGG - chr7.1:16149371-16149390 None:intergenic 20.0%
!!! TATTTTTACTTTTATGAGTC+TGG + chr7.1:16148919-16148938 MS.gene42534:intron 20.0%
!!! TATTTTTTCTTAAGTACTTC+TGG + chr7.1:16149242-16149261 MS.gene42534:intron 20.0%
!!! TGATTGTTTGTTACTAAATT+TGG + chr7.1:16146424-16146443 MS.gene42534:intron 20.0%
!!! TTTAATTTTATAGATGCTAG+TGG + chr7.1:16149109-16149128 MS.gene42534:intron 20.0%
! CAAAAATATAGTCAATGAGT+TGG + chr7.1:16148387-16148406 MS.gene42534:CDS 25.0%
! CTCATTTAACAATGCTAAAA+AGG + chr7.1:16148703-16148722 MS.gene42534:intron 25.0%
! GCTGGTTAAGAATTATAAAA+TGG + chr7.1:16147167-16147186 MS.gene42534:intron 25.0%
! TACCTTCAATGTTTGTAAAA+AGG - chr7.1:16147991-16148010 None:intergenic 25.0%
! TACTTCAGTAGTATACATTA+TGG + chr7.1:16147817-16147836 MS.gene42534:CDS 25.0%
! TGATCCTTAACATATTTCAA+CGG - chr7.1:16146293-16146312 None:intergenic 25.0%
! TTACTGTGAACTTAAAACAT+TGG + chr7.1:16148177-16148196 MS.gene42534:CDS 25.0%
! TTATCAGAAGAAAAGAAACA+TGG + chr7.1:16148139-16148158 MS.gene42534:CDS 25.0%
! TTTCTGCTAAAACAATTTGA+TGG - chr7.1:16147526-16147545 None:intergenic 25.0%
!! ATTCAGCCAACATTTTAAAT+TGG + chr7.1:16149031-16149050 MS.gene42534:intron 25.0%
!! CATTGTTAATATTGGTTATG+TGG + chr7.1:16146747-16146766 MS.gene42534:intron 25.0%
!! TTACAAACATTGAAGGTATA+GGG + chr7.1:16147993-16148012 MS.gene42534:intron 25.0%
!! TTTACAAACATTGAAGGTAT+AGG + chr7.1:16147992-16148011 MS.gene42534:intron 25.0%
!!! ACAGTTTTAAGGATTTATTC+AGG + chr7.1:16149448-16149467 MS.gene42534:intron 25.0%
AACAAATCACATCAAATGGT+GGG + chr7.1:16148078-16148097 MS.gene42534:CDS 30.0%
ACTAACAGATAAATGATTGG+AGG - chr7.1:16147110-16147129 None:intergenic 30.0%
ACTGTTTATCACATCTTTGT+AGG + chr7.1:16149663-16149682 MS.gene42534:intron 30.0%
AGACTGTGACAATATACTTA+AGG - chr7.1:16148293-16148312 None:intergenic 30.0%
ATTCAAGCAACAATCTTACT+GGG - chr7.1:16146888-16146907 None:intergenic 30.0%
CACATTAATCCAAATGTTCT+TGG - chr7.1:16149698-16149717 None:intergenic 30.0%
CAGAATAAGAAAGGAAAACA+AGG + chr7.1:16146527-16146546 MS.gene42534:CDS 30.0%
GGAGCTTCTCATTTATATTA+TGG + chr7.1:16149063-16149082 MS.gene42534:intron 30.0%
TAACAAATCACATCAAATGG+TGG + chr7.1:16148077-16148096 MS.gene42534:CDS 30.0%
TAAGAAAGGAAAACAAGGTT+TGG + chr7.1:16146532-16146551 MS.gene42534:intron 30.0%
TAATCCAAATGTTCTTGGTA+AGG - chr7.1:16149693-16149712 None:intergenic 30.0%
TCTATCTGGCAATAATAAGT+TGG + chr7.1:16149496-16149515 MS.gene42534:intron 30.0%
TTCTCCGTTGAAATATGTTA+AGG + chr7.1:16146286-16146305 MS.gene42534:intron 30.0%
TTGAACATAAGTCAGGTTTA+AGG + chr7.1:16146559-16146578 MS.gene42534:intron 30.0%
! AAACATAGTGTAGGTTGAAT+CGG - chr7.1:16149740-16149759 None:intergenic 30.0%
! ATCTATGGGATAAAAGTACA+TGG + chr7.1:16146495-16146514 MS.gene42534:CDS 30.0%
! CACCTTTTTACAAACATTGA+AGG + chr7.1:16147986-16148005 MS.gene42534:intron 30.0%
! TACAAACATTGAAGGTATAG+GGG + chr7.1:16147994-16148013 MS.gene42534:intron 30.0%
! TATGCATTTCATTTTGCATG+TGG + chr7.1:16147741-16147760 MS.gene42534:intron 30.0%
!!! CTCTTGTTATTCTTTTGTTC+TGG + chr7.1:16146702-16146721 MS.gene42534:intron 30.0%
ACAAATCACATCAAATGGTG+GGG + chr7.1:16148079-16148098 MS.gene42534:CDS 35.0%
ACATGAATCACAAAACCAGA+TGG - chr7.1:16146963-16146982 None:intergenic 35.0%
ACCAGATGGCATTTCAATTA+AGG - chr7.1:16146949-16146968 None:intergenic 35.0%
AGAGGACTATCAAAATATCG+TGG + chr7.1:16147483-16147502 MS.gene42534:CDS 35.0%
AGATAGAGTTTGACTGCTAT+AGG - chr7.1:16149483-16149502 None:intergenic 35.0%
CAAAGATGCACAAATGAACA+TGG - chr7.1:16147900-16147919 None:intergenic 35.0%
CAGACAAGAATGATGTCAAT+GGG - chr7.1:16148519-16148538 None:intergenic 35.0%
CAGTAGTAACACTATCATGT+TGG - chr7.1:16149000-16149019 None:intergenic 35.0%
GAACATTTGGATTAATGTGC+AGG + chr7.1:16149699-16149718 MS.gene42534:intron 35.0%
GAGAAACCTTCAAATCATGA+TGG + chr7.1:16148427-16148446 MS.gene42534:CDS 35.0%
GATAGAGTTTGACTGCTATA+GGG - chr7.1:16149482-16149501 None:intergenic 35.0%
GATTCAAGCAACAATCTTAC+TGG - chr7.1:16146889-16146908 None:intergenic 35.0%
GGTGGTATAAATTAGTCGAT+GGG + chr7.1:16147762-16147781 MS.gene42534:intron 35.0%
GTAGTATACATTATGGTACG+TGG + chr7.1:16147824-16147843 MS.gene42534:intron 35.0%
GTGGTATAAATTAGTCGATG+GGG + chr7.1:16147763-16147782 MS.gene42534:intron 35.0%
TAATGATTCATTGACCAAGC+TGG + chr7.1:16147621-16147640 MS.gene42534:intron 35.0%
TAATTGTTTCGTGTAACCAG+TGG - chr7.1:16149549-16149568 None:intergenic 35.0%
TATAGCAGTCAAACTCTATC+TGG + chr7.1:16149482-16149501 MS.gene42534:intron 35.0%
TATTGATCCCATAACCAGTT+TGG - chr7.1:16149278-16149297 None:intergenic 35.0%
TCATTTGTGCATCTTTGATG+TGG + chr7.1:16147903-16147922 MS.gene42534:intron 35.0%
TGGTATAAATTAGTCGATGG+GGG + chr7.1:16147764-16147783 MS.gene42534:intron 35.0%
TGGTGAATTGTGTGTGTATT+AGG + chr7.1:16146444-16146463 MS.gene42534:intron 35.0%
TGGTGGTATAAATTAGTCGA+TGG + chr7.1:16147761-16147780 MS.gene42534:intron 35.0%
TGTCTTTCTCATCTTTACTG+TGG + chr7.1:16147645-16147664 MS.gene42534:intron 35.0%
TTCACCTTACCAAGAACATT+TGG + chr7.1:16149686-16149705 MS.gene42534:intron 35.0%
TTGTAAGGTTGAGTTAGTGT+AGG + chr7.1:16149603-16149622 MS.gene42534:intron 35.0%
! AACATAGTGTAGGTTGAATC+GGG - chr7.1:16149739-16149758 None:intergenic 35.0%
! ACACTATCATGTTGGTCTAA+TGG - chr7.1:16148992-16149011 None:intergenic 35.0%
! ACCTTACAAACCAGGTTTTA+TGG - chr7.1:16149592-16149611 None:intergenic 35.0%
! GTGAAAGTATGAATGAAGCT+AGG + chr7.1:16149397-16149416 MS.gene42534:intron 35.0%
! GTGTGTATTGCAAAAGTGTA+TGG + chr7.1:16147595-16147614 MS.gene42534:intron 35.0%
!! CCTTACAAACCAGGTTTTAT+GGG - chr7.1:16149591-16149610 None:intergenic 35.0%
!! CTTACAAACCAGGTTTTATG+GGG - chr7.1:16149590-16149609 None:intergenic 35.0%
!! GAAAAGAAACATGGTTTTGC+TGG + chr7.1:16148148-16148167 MS.gene42534:CDS 35.0%
!!! TGTTTTTTCTCATTGTGCAG+CGG - chr7.1:16148250-16148269 None:intergenic 35.0%
AAATCCAGTGCTCTCTTGAA+AGG + chr7.1:16147232-16147251 MS.gene42534:intron 40.0%
AAGAAAGCGAAGAAAGAGAG+AGG + chr7.1:16146092-16146111 MS.gene42534:CDS 40.0%
AAGAATACCTTGCGTCTTTG+CGG + chr7.1:16147371-16147390 MS.gene42534:CDS 40.0%
AAGTCCATCCAAACTGGTTA+TGG + chr7.1:16149267-16149286 MS.gene42534:intron 40.0%
AAGTTGAAGAGTAGCTAGCT+AGG - chr7.1:16146202-16146221 None:intergenic 40.0%
ACATTGCAATGGGAATGAGT+GGG + chr7.1:16148467-16148486 MS.gene42534:CDS 40.0%
AGATCCACTAAAAAGTGGCT+GGG - chr7.1:16147064-16147083 None:intergenic 40.0%
AGTCCATCCAAACTGGTTAT+GGG + chr7.1:16149268-16149287 MS.gene42534:intron 40.0%
AGTGCTCTCTTGAAAGGAAA+AGG + chr7.1:16147238-16147257 MS.gene42534:intron 40.0%
CAACCTCAGATGTATGAGAA+AGG - chr7.1:16148627-16148646 None:intergenic 40.0%
CATGTCATGTAAGCAGCAAT+AGG - chr7.1:16147434-16147453 None:intergenic 40.0%
CATTGGATCAACAGTGTTGT+AGG - chr7.1:16148557-16148576 None:intergenic 40.0%
CTAACTCAACCTTACAAACC+AGG - chr7.1:16149600-16149619 None:intergenic 40.0%
CTACAACACTGTTGATCCAA+TGG + chr7.1:16148555-16148574 MS.gene42534:CDS 40.0%
CTGTGCATGAATTGATTGGA+CGG + chr7.1:16146624-16146643 MS.gene42534:intron 40.0%
GAAATTCGTGTTTGTGGTGA+TGG + chr7.1:16146646-16146665 MS.gene42534:intron 40.0%
GATAATCTTGTTCCAGCATC+AGG - chr7.1:16148124-16148143 None:intergenic 40.0%
GATCTTGCAGGAAAAACAGT+TGG - chr7.1:16147956-16147975 None:intergenic 40.0%
GCAGACAAGAATGATGTCAA+TGG - chr7.1:16148520-16148539 None:intergenic 40.0%
GCCTTAATTGAAATGCCATC+TGG + chr7.1:16146945-16146964 MS.gene42534:intron 40.0%
GCGGAAAGTGAATATGTTAG+TGG + chr7.1:16148028-16148047 MS.gene42534:CDS 40.0%
GTGCTCTCTTGAAAGGAAAA+GGG + chr7.1:16147239-16147258 MS.gene42534:intron 40.0%
GTGTGTGTATTAGGCATAGA+TGG + chr7.1:16146453-16146472 MS.gene42534:intron 40.0%
TATAGGGGATAATTCAGCTG+CGG + chr7.1:16148009-16148028 MS.gene42534:CDS 40.0%
TCGTTATGAAGCGCATCTAT+GGG + chr7.1:16146481-16146500 MS.gene42534:CDS 40.0%
TGGACTGTTGAACATAAGTC+AGG + chr7.1:16146552-16146571 MS.gene42534:intron 40.0%
TGGAGTTACAGTTCTTGATC+TGG + chr7.1:16147665-16147684 MS.gene42534:intron 40.0%
TGTATTAGGCATAGATGGAC+TGG + chr7.1:16146458-16146477 MS.gene42534:intron 40.0%
TGTGCTGTGCATGAATTGAT+TGG + chr7.1:16146620-16146639 MS.gene42534:intron 40.0%
TTACATGACATGCTTGATGC+AGG + chr7.1:16147442-16147461 MS.gene42534:intron 40.0%
TTGCTGCCATCATGATTTGA+AGG - chr7.1:16148436-16148455 None:intergenic 40.0%
! ATAGTCAATGAGTTGGATCG+TGG + chr7.1:16148394-16148413 MS.gene42534:CDS 40.0%
! CCCATAAAACCTGGTTTGTA+AGG + chr7.1:16149588-16149607 MS.gene42534:intron 40.0%
! CTGGCAATAATAAGTTGGCA+GGG + chr7.1:16149501-16149520 MS.gene42534:intron 40.0%
! CTTTCTCATACATCTGAGGT+TGG + chr7.1:16148625-16148644 MS.gene42534:intron 40.0%
! GATCAGCTTTTACTGTACAG+AGG + chr7.1:16146065-16146084 MS.gene42534:CDS 40.0%
! GCATTTCATTTTGCATGTGG+TGG + chr7.1:16147744-16147763 MS.gene42534:intron 40.0%
! GTGATTCATGTCCTCCTTTT+GGG + chr7.1:16146972-16146991 MS.gene42534:intron 40.0%
! TAGTCAATGAGTTGGATCGT+GGG + chr7.1:16148395-16148414 MS.gene42534:CDS 40.0%
! TCTGGCAATAATAAGTTGGC+AGG + chr7.1:16149500-16149519 MS.gene42534:intron 40.0%
! TGTGATTCATGTCCTCCTTT+TGG + chr7.1:16146971-16146990 MS.gene42534:intron 40.0%
!! ACCTTGCTGCTCTGAAATAT+TGG + chr7.1:16146839-16146858 MS.gene42534:CDS 40.0%
!! CCTTGCTGCTCTGAAATATT+GGG + chr7.1:16146840-16146859 MS.gene42534:CDS 40.0%
!! CTTGCTGCTCTGAAATATTG+GGG + chr7.1:16146841-16146860 MS.gene42534:CDS 40.0%
!! GATCGACTTGACATTGCAAT+GGG + chr7.1:16148457-16148476 MS.gene42534:CDS 40.0%
!! TGATCGACTTGACATTGCAA+TGG + chr7.1:16148456-16148475 MS.gene42534:CDS 40.0%
!! TTTTCCTTTCAAGAGAGCAC+TGG - chr7.1:16147239-16147258 None:intergenic 40.0%
!!! AAGAGCAGTGGTTTTTCAAG+AGG + chr7.1:16147465-16147484 MS.gene42534:CDS 40.0%
!!! AGCCACTTTTTAGTGGATCT+GGG + chr7.1:16147064-16147083 MS.gene42534:intron 40.0%
!!! TTTACCCAGCCACTTTTTAG+TGG + chr7.1:16147057-16147076 MS.gene42534:intron 40.0%
AAGAATCGACAACCTGATGC+TGG + chr7.1:16148109-16148128 MS.gene42534:CDS 45.0%
AAGTTTGATCTGTGTGCTGC+AGG + chr7.1:16147300-16147319 MS.gene42534:intron 45.0%
ACTCATCAGCAAATGTCGTG+TGG - chr7.1:16149320-16149339 None:intergenic 45.0%
AGAGAAAGCGGCAAAAAGAC+AGG + chr7.1:16148333-16148352 MS.gene42534:CDS 45.0%
ATTGTTCAATGCAGCACCAC+TGG + chr7.1:16149530-16149549 MS.gene42534:intron 45.0%
CAAAATATCGTGGACTCTCC+AGG + chr7.1:16147493-16147512 MS.gene42534:CDS 45.0%
CAATTTGATGGAACCACACC+TGG - chr7.1:16147514-16147533 None:intergenic 45.0%
CAGATCCACTAAAAAGTGGC+TGG - chr7.1:16147065-16147084 None:intergenic 45.0%
CATTGCAATGGGAATGAGTG+GGG + chr7.1:16148468-16148487 MS.gene42534:CDS 45.0%
CCATACAAGATGCCAGAGTT+AGG + chr7.1:16148223-16148242 MS.gene42534:CDS 45.0%
CCCAATATTTCAGAGCAGCA+AGG - chr7.1:16146843-16146862 None:intergenic 45.0%
CCTAACTCTGGCATCTTGTA+TGG - chr7.1:16148226-16148245 None:intergenic 45.0%
CCTACACTATGTTTCAGCCA+CGG + chr7.1:16149746-16149765 MS.gene42534:CDS 45.0%
CTACACTATGTTTCAGCCAC+GGG + chr7.1:16149747-16149766 MS.gene42534:CDS 45.0%
CTCAGATGTATGAGAAAGGC+CGG - chr7.1:16148623-16148642 None:intergenic 45.0%
CTCCCAGATCCACTAAAAAG+TGG - chr7.1:16147069-16147088 None:intergenic 45.0%
CTTAACCAGCTGACATGTCA+GGG - chr7.1:16147157-16147176 None:intergenic 45.0%
GACATTGCAATGGGAATGAG+TGG + chr7.1:16148466-16148485 MS.gene42534:CDS 45.0%
GATCCCATAACCAGTTTGGA+TGG - chr7.1:16149274-16149293 None:intergenic 45.0%
GGTTATGTGGCGATGTTTGT+CGG + chr7.1:16146760-16146779 MS.gene42534:intron 45.0%
GTCGTTATGAAGCGCATCTA+TGG + chr7.1:16146480-16146499 MS.gene42534:CDS 45.0%
GTGTTGTAGGCTGTCAAAAG+TGG - chr7.1:16148544-16148563 None:intergenic 45.0%
TCAGTCGACAGGACTGTATA+TGG + chr7.1:16149630-16149649 MS.gene42534:intron 45.0%
TCTTAACCAGCTGACATGTC+AGG - chr7.1:16147158-16147177 None:intergenic 45.0%
TGAGACGATAGTGATCTTGC+AGG - chr7.1:16147968-16147987 None:intergenic 45.0%
TGGACGGAAATTCGTGTTTG+TGG + chr7.1:16146640-16146659 MS.gene42534:intron 45.0%
TTGCAATACACACGCAGACT+TGG - chr7.1:16147588-16147607 None:intergenic 45.0%
! CAAGAGCATGCAAGAGAAAG+CGG + chr7.1:16148321-16148340 MS.gene42534:CDS 45.0%
! GCACTGATGCTTCTGATCAA+AGG + chr7.1:16146376-16146395 MS.gene42534:intron 45.0%
! GGCATCTTGTATGGTTCTGT+CGG - chr7.1:16148217-16148236 None:intergenic 45.0%
! GTATGATGATGAGGAAGCAG+CGG + chr7.1:16146804-16146823 MS.gene42534:CDS 45.0%
! TCTTGTATGGTTCTGTCGGT+TGG - chr7.1:16148213-16148232 None:intergenic 45.0%
!! AAAAGGGCGTTAAGCACTTC+TGG + chr7.1:16147255-16147274 MS.gene42534:intron 45.0%
!! CTCTGAAATATTGGGGTCCT+GGG + chr7.1:16146848-16146867 MS.gene42534:CDS 45.0%
!! GTGGTGATGGCAGTATACTT+GGG + chr7.1:16146659-16146678 MS.gene42534:intron 45.0%
!! TCGGCGGTGTGTTTTTGATA+GGG + chr7.1:16146779-16146798 MS.gene42534:intron 45.0%
!! TGTGGTGATGGCAGTATACT+TGG + chr7.1:16146658-16146677 MS.gene42534:intron 45.0%
!! TTTTTAGTGGATCTGGGAGC+TGG + chr7.1:16147070-16147089 MS.gene42534:intron 45.0%
!!! CAGCCACTTTTTAGTGGATC+TGG + chr7.1:16147063-16147082 MS.gene42534:intron 45.0%
AACAGGACGTGAGTCCCAAA+AGG - chr7.1:16146989-16147008 None:intergenic 50.0%
AATACCTTGCGTCTTTGCGG+AGG + chr7.1:16147374-16147393 MS.gene42534:CDS 50.0%
AGAGTAGCTAGCTAGGTACC+TGG - chr7.1:16146195-16146214 None:intergenic 50.0%
ATGAGAGATGTCCAGAGAGC+AGG - chr7.1:16148586-16148605 None:intergenic 50.0%
CAATGGTAGATCCTGCTCTC+TGG + chr7.1:16148572-16148591 MS.gene42534:CDS 50.0%
CAGAGAGCAGGATCTACCAT+TGG - chr7.1:16148574-16148593 None:intergenic 50.0%
CCAGCCATTCGACCATATGA+TGG - chr7.1:16147790-16147809 None:intergenic 50.0%
CCATCATATGGTCGAATGGC+TGG + chr7.1:16147787-16147806 MS.gene42534:CDS 50.0%
CCGTGGCTGAAACATAGTGT+AGG - chr7.1:16149749-16149768 None:intergenic 50.0%
CGGCCTTTCTCATACATCTG+AGG + chr7.1:16148621-16148640 MS.gene42534:CDS 50.0%
CTGGAGAAGTCCATCCAAAC+TGG + chr7.1:16149261-16149280 MS.gene42534:intron 50.0%
GATGAGAAAGACAGCCAGCT+TGG - chr7.1:16147638-16147657 None:intergenic 50.0%
GGGAAGTTAATGAGAGTCCC+AGG - chr7.1:16146868-16146887 None:intergenic 50.0%
GTAGATGGAGCTGCGTTTAC+CGG - chr7.1:16146162-16146181 None:intergenic 50.0%
GTGTAGGAGAATCAGTCGAC+AGG + chr7.1:16149619-16149638 MS.gene42534:intron 50.0%
TATGTGGCGATGTTTGTCGG+CGG + chr7.1:16146763-16146782 MS.gene42534:intron 50.0%
TCGTACAGCCCCATAAAACC+TGG + chr7.1:16149579-16149598 MS.gene42534:intron 50.0%
TCTTTCCCTGACATGTCAGC+TGG + chr7.1:16147149-16147168 MS.gene42534:intron 50.0%
! CAATGAGTTGGATCGTGGGA+AGG + chr7.1:16148399-16148418 MS.gene42534:CDS 50.0%
! GATAGGGGCGTATGATGATG+AGG + chr7.1:16146795-16146814 MS.gene42534:intron 50.0%
!! CGGCGGTGTGTTTTTGATAG+GGG + chr7.1:16146780-16146799 MS.gene42534:intron 50.0%
!! GCTCTGAAATATTGGGGTCC+TGG + chr7.1:16146847-16146866 MS.gene42534:CDS 50.0%
!! GTCGGCGGTGTGTTTTTGAT+AGG + chr7.1:16146778-16146797 MS.gene42534:intron 50.0%
AAACGCAGCTCCATCTACCG+TGG + chr7.1:16146164-16146183 MS.gene42534:CDS 55.0%
AGGACGTGAGTCCCAAAAGG+AGG - chr7.1:16146986-16147005 None:intergenic 55.0%
AGTCGATGGGGGCCATCATA+TGG + chr7.1:16147775-16147794 MS.gene42534:intron 55.0%
CTAGGTACCTGGTGACACCA+CGG - chr7.1:16146184-16146203 None:intergenic 55.0%
CTCATTCCCATGCTTCCTGC+CGG + chr7.1:16148601-16148620 MS.gene42534:CDS 55.0%
GATGTATGAGAAAGGCCGGC+AGG - chr7.1:16148619-16148638 None:intergenic 55.0%
GCTTGATGCAGGAAGAGCAG+TGG + chr7.1:16147453-16147472 MS.gene42534:intron 55.0%
GGAGACATCAGAAGCAGTGG+CGG + chr7.1:16146034-16146053 MS.gene42534:CDS 55.0%
GGGGCCATCATATGGTCGAA+TGG + chr7.1:16147783-16147802 MS.gene42534:CDS 55.0%
TATCGTGGACTCTCCAGGTG+TGG + chr7.1:16147498-16147517 MS.gene42534:intron 55.0%
TGCGGAGACATCAGAAGCAG+TGG + chr7.1:16146031-16146050 MS.gene42534:CDS 55.0%
TTGTGCAGCGGTCCTAACTC+TGG - chr7.1:16148238-16148257 None:intergenic 55.0%
AAAATGCCTCCGTGTGCCGC+CGG + chr7.1:16146140-16146159 MS.gene42534:CDS 60.0%
AGAAAGGCCGGCAGGAAGCA+TGG - chr7.1:16148611-16148630 None:intergenic 60.0%
CACACCTCCGCAAAGACGCA+AGG - chr7.1:16147381-16147400 None:intergenic 60.0%
CCTGGTGACACCACGGTAGA+TGG - chr7.1:16146177-16146196 None:intergenic 60.0%
CTCCGATCCAGGCAAGTCTG+CGG + chr7.1:16146013-16146032 MS.gene42534:CDS 60.0%
CTCCGCAGACTTGCCTGGAT+CGG - chr7.1:16146018-16146037 None:intergenic 60.0%
GACATCAGAAGCAGTGGCGG+CGG + chr7.1:16146037-16146056 MS.gene42534:CDS 60.0%
GATGGAGCTGCGTTTACCGG+CGG - chr7.1:16146159-16146178 None:intergenic 60.0%
GATGTCTCCGCAGACTTGCC+TGG - chr7.1:16146023-16146042 None:intergenic 60.0%
GCTTCGTCTTCCTCCGATCC+AGG + chr7.1:16146002-16146021 MS.gene42534:CDS 60.0%
! GAAAGGCCGGCAGGAAGCAT+GGG - chr7.1:16148610-16148629 None:intergenic 60.0%
!! CCATCTACCGTGGTGTCACC+AGG + chr7.1:16146174-16146193 MS.gene42534:CDS 60.0%
CGCAGACTTGCCTGGATCGG+AGG - chr7.1:16146015-16146034 None:intergenic 65.0%
CTGCGTTTACCGGCGGCACA+CGG - chr7.1:16146152-16146171 None:intergenic 65.0%
CGTTTACCGGCGGCACACGG+AGG - chr7.1:16146149-16146168 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 16145999 16149774 16145999 ID=MS.gene42534
chr7.1 mRNA 16145999 16149774 16145999 ID=MS.gene42534.t1;Parent=MS.gene42534
chr7.1 exon 16145999 16146195 16145999 ID=MS.gene42534.t1.exon1;Parent=MS.gene42534.t1
chr7.1 CDS 16145999 16146195 16145999 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16146466 16146548 16146466 ID=MS.gene42534.t1.exon2;Parent=MS.gene42534.t1
chr7.1 CDS 16146466 16146548 16146466 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16146672 16146680 16146672 ID=MS.gene42534.t1.exon3;Parent=MS.gene42534.t1
chr7.1 CDS 16146672 16146680 16146672 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16146800 16146888 16146800 ID=MS.gene42534.t1.exon4;Parent=MS.gene42534.t1
chr7.1 CDS 16146800 16146888 16146800 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16147322 16147395 16147322 ID=MS.gene42534.t1.exon5;Parent=MS.gene42534.t1
chr7.1 CDS 16147322 16147395 16147322 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16147464 16147514 16147464 ID=MS.gene42534.t1.exon6;Parent=MS.gene42534.t1
chr7.1 CDS 16147464 16147514 16147464 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16147777 16147838 16147777 ID=MS.gene42534.t1.exon7;Parent=MS.gene42534.t1
chr7.1 CDS 16147777 16147838 16147777 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16148008 16148642 16148008 ID=MS.gene42534.t1.exon8;Parent=MS.gene42534.t1
chr7.1 CDS 16148008 16148642 16148008 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
chr7.1 exon 16149721 16149774 16149721 ID=MS.gene42534.t1.exon9;Parent=MS.gene42534.t1
chr7.1 CDS 16149721 16149774 16149721 ID=cds.MS.gene42534.t1;Parent=MS.gene42534.t1
Gene Sequence

>MS.gene42534

ATGGCTTCGTCTTCCTCCGATCCAGGCAAGTCTGCGGAGACATCAGAAGCAGTGGCGGCGGCGAATGATCAGCTTTTACTGTACAGAGGATTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCTAAAGAACGAATCAGTAAAATGCCTCCGTGTGCCGCCGGTAAACGCAGCTCCATCTACCGTGGTGTCACCAGGTACCTAGCTAGCTACTCTTCAACTTCAATCAACTCGTTTTCTACAAGTTCTTATTAGATTTAGATTCAGTTTGGATTTTATTTTTGAGCTTCTCCGTTGAAATATGTTAAGGATCATCACTTATAAGTTTCACTTAATTAACTTAATTTCAATTTATTCTACAAGTTATTAACTTTGTCGCACTGATGCTTCTGATCAAAGGTTATTACTTATTAGTTAACATTGTTTGATTGTTTGTTACTAAATTTGGTGAATTGTGTGTGTATTAGGCATAGATGGACTGGTCGTTATGAAGCGCATCTATGGGATAAAAGTACATGGAATCAAAATCAGAATAAGAAAGGAAAACAAGGTTTGGACTGTTGAACATAAGTCAGGTTTAAGGTTTTGCGTAAAGATGAAATTGCTTATGTTTATTGTTTTTGTGCTGTGCATGAATTGATTGGACGGAAATTCGTGTTTGTGGTGATGGCAGTATACTTGGGTGAGTTTTCAATGTGATGCTCTCTTGTTATTCTTTTGTTCTGGTTTTTTATTGAATTTTTTAATGCATTGTTAATATTGGTTATGTGGCGATGTTTGTCGGCGGTGTGTTTTTGATAGGGGCGTATGATGATGAGGAAGCAGCGGCTAGAGCGTATGACCTTGCTGCTCTGAAATATTGGGGTCCTGGGACTCTCATTAACTTCCCAGTAAGATTGTTGCTTGAATCGATTTGTACTTAATTTAGAGATAGTTTGGATTTGTTGCCTTAATTGAAATGCCATCTGGTTTTGTGATTCATGTCCTCCTTTTGGGACTCACGTCCTGTTTTGTATTTTTCATCAAAAGATTTTTTGTGAAATGACTAGAATTTTTCTTTTACCCAGCCACTTTTTAGTGGATCTGGGAGCTGGTGACTCTGAAGTTACCTCCAATCATTTATCTGTTAGTATTTATGATTATGATGCGCTCTTTCCCTGACATGTCAGCTGGTTAAGAATTATAAAATGGAAATGTTTTGTTCGCAACTAGAATTTGATGTTTGACACGATTAAATCCAGTGCTCTCTTGAAAGGAAAAGGGCGTTAAGCACTTCTGGTAAATAGAGTAATTTTTATAGCAAGTTTGATCTGTGTGCTGCAGGTGACTGATTATACGAGAGATCTCGAAGAAATGCAGAACGTTTCGAGAGAAGAATACCTTGCGTCTTTGCGGAGGTGTGTATATCTCTCACAGAAATATTAACTTGTAACCTATTGCTGCTTACATGACATGCTTGATGCAGGAAGAGCAGTGGTTTTTCAAGAGGACTATCAAAATATCGTGGACTCTCCAGGTGTGGTTCCATCAAATTGTTTTAGCAGAAATCGTCTGTCAATTAAATTCTTTTTTATCTCTATTATCTGCCAAGTCTGCGTGTGTATTGCAAAAGTGTATGGAGCTAATGATTCATTGACCAAGCTGGCTGTCTTTCTCATCTTTACTGTGGAGTTACAGTTCTTGATCTGGTGTATTTGACATAGATTTATAGATTTTGACATAGATTTGATGCTAACTTGAACTATGCATTTCATTTTGCATGTGGTGGTATAAATTAGTCGATGGGGGCCATCATATGGTCGAATGGCTGGATCTGATTACTTCAGTAGTATACATTATGGTACGTGGTAATCAAATTTTATGTCCAAGCTAATATTTTATTGAATGGAGTATATGAACCATGTTCATTTGTGCATCTTTGATGTGGAGAAAAAGTTATATTATTCAATTAATTCCAACTGTTTTTCCTGCAAGATCACTATCGTCTCACCTTTTTACAAACATTGAAGGTATAGGGGATAATTCAGCTGCGGAAAGTGAATATGTTAGTGGTTTCTGCGTAGAAAGAAAGATTGATTTAACAAATCACATCAAATGGTGGGGATCTAATAAGAATCGACAACCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAACATGGTTTTGCTGGAGATATTTACTGTGAACTTAAAACATTGGAACAGAAAGTCCAACCGACAGAACCATACAAGATGCCAGAGTTAGGACCGCTGCACAATGAGAAAAAACATAAAAGTTCTTCAATCTCTGCCTTAAGTATATTGTCACAGTCTTCTGCTTACAAGAGCATGCAAGAGAAAGCGGCAAAAAGACAGGAAAATAGCACTGATAATGACGAGAATGAAAACAAAAATATAGTCAATGAGTTGGATCGTGGGAAGGCAGTAGAGAAACCTTCAAATCATGATGGCAGCAATGATCGACTTGACATTGCAATGGGAATGAGTGGGGCGTTGTCTCTTCAAAGAAATGTTTACCCATTGACATCATTCTTGTCTGCACCACTTTTGACAGCCTACAACACTGTTGATCCAATGGTAGATCCTGCTCTCTGGACATCTCTCATTCCCATGCTTCCTGCCGGCCTTTCTCATACATCTGAGGTTGGTATAATGACTAAAGTATTTTACTTTATTCACAAGGAAGAAAGATCACATGAAAATCTCATTTAACAATGCTAAAAAGGCTCAGTGAGTTACTTATAAGTTATAACAGTCTCTAGTCATGATCTGCAAGACAAGCTTCCTACTTTCATTTAATGCTTTTTATCTCTTGATTATTTAAGATTAGTTAGCAAGACTTAAAATAGTTTGCATGAGTGTTTGTGCATCAATATGCTCTCACTGAATATTCTTTGAAGTGTTACATGATATAGCTTTTATTTTTACTTTTATGAGTCTGGTGATTACATATTATGTTAACATGTTTATGAAGATATGTTTTCTTTTGCCATTAGACCAACATGATAGTGTTACTACTGTCAGCAAATTTATTCAGCCAACATTTTAAATTGGTTTATTATGGGAGCTTCTCATTTATATTATGGTTCTTTACTTGTGAAACACTTCCTTTAATTTTATAGATGCTAGTGGAGAAGTTATATGAGAGAGCTTCTAAAAAAATTGAGATGCATAAGTTAATTTCAACATATACAAAAAACTATTATTTCATAAGTTCAGTTTTTTTAGATTCTTTTGATGCTTATTTTTTCTTAAGTACTTCTGGAGAAGTCCATCCAAACTGGTTATGGGATCAATATAATTAATGCAGTTTTAGGCCACACGACATTTGCTGATGAGTCCATAATCATATCTCACATATTTCTGAACCTAATGTGAATGTTATCAAATATTTTCTGTGAAAGTATGAATGAAGCTAGGAAATATAGAGCCAATAATTTTTCAAATTACAGTTTTAAGGATTTATTCAGGAAAAGCAGCCCTATAGCAGTCAAACTCTATCTGGCAATAATAAGTTGGCAGGGACTATAATTGTTCAATGCAGCACCACTGGTTACACGAAACAATTAATATATATCTTCGTACAGCCCCATAAAACCTGGTTTGTAAGGTTGAGTTAGTGTAGGAGAATCAGTCGACAGGACTGTATATGGTAGCATAAAAACTGTTTATCACATCTTTGTAGGTTCACCTTACCAAGAACATTTGGATTAATGTGCAGGTTACAAAGACAGAGCCCGATTCAACCTACACTATGTTTCAGCCACGGGAGTGA
Protein sequence

>MS.gene42534.t1

MASSSSDPGKSAETSEAVAAANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWGPSYGRMAGSDYFSSIHYGIGDNSAAESEYVSGFCVERKIDLTNHIKWWGSNKNRQPDAGTRLSEEKKHGFAGDIYCELKTLEQKVQPTEPYKMPELGPLHNEKKHKSSSISALSILSQSSAYKSMQEKAAKRQENSTDNDENENKNIVNELDRGKAVEKPSNHDGSNDRLDIAMGMSGALSLQRNVYPLTSFLSAPLLTAYNTVDPMVDPALWTSLIPMLPAGLSHTSEVTKTEPDSTYTMFQPRE