Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055083.t1 | XP_013449059.1 | 59.1 | 492 | 141 | 8 | 10 | 444 | 3 | 491 | 6.10E-139 | 504.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055083.t1 | A0A072U0X6 | 59.1 | 492 | 141 | 8 | 10 | 444 | 3 | 491 | 4.4e-139 | 504.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049350 | MS.gene055083 | 0.815036 | 1.14E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene055083 | 0.818734 | 1.68E-52 | -1.69E-46 |
| MS.gene051018 | MS.gene055083 | 0.80468 | 1.92E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene055083 | 0.802616 | 5.16E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene055083 | 0.847004 | 1.52E-59 | -1.69E-46 |
| MS.gene054584 | MS.gene055083 | 0.842352 | 2.73E-58 | -1.69E-46 |
| MS.gene055083 | MS.gene055580 | -0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene05894 | 0.814326 | 1.63E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene060519 | 0.812542 | 4.02E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene061564 | 0.818055 | 2.39E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene062183 | 0.822314 | 2.53E-53 | -1.69E-46 |
| MS.gene055083 | MS.gene062184 | 0.813006 | 3.18E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene063478 | 0.817649 | 2.96E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene064520 | 0.807535 | 4.82E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene064521 | 0.804789 | 1.82E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene06469 | 0.817862 | 2.65E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene066196 | 0.810993 | 8.74E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene069852 | 0.827747 | 1.32E-54 | -1.69E-46 |
| MS.gene055083 | MS.gene070339 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene055083 | MS.gene073083 | 0.80627 | 8.93E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene074519 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene07486 | 0.814432 | 1.54E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene07723 | 0.824748 | 6.82E-54 | -1.69E-46 |
| MS.gene055083 | MS.gene07876 | 0.809721 | 1.64E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene20557 | 0.829893 | 3.99E-55 | -1.69E-46 |
| MS.gene055083 | MS.gene21127 | 0.808716 | 2.70E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene26380 | 0.842632 | 2.30E-58 | -1.69E-46 |
| MS.gene055083 | MS.gene26659 | 0.834111 | 3.62E-56 | -1.69E-46 |
| MS.gene055083 | MS.gene26916 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene27646 | -0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene30350 | 0.807012 | 6.22E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene31433 | 0.825121 | 5.57E-54 | -1.69E-46 |
| MS.gene055083 | MS.gene34232 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene055083 | MS.gene34266 | 0.815604 | 8.49E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene34286 | 0.843358 | 1.47E-58 | -1.69E-46 |
| MS.gene055083 | MS.gene36334 | 0.818227 | 2.19E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene36569 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene38303 | 0.845491 | 3.93E-59 | -1.69E-46 |
| MS.gene055083 | MS.gene39046 | 0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene39518 | 0.812479 | 4.15E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene40871 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene41651 | 0.819215 | 1.31E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene42310 | 0.806859 | 6.70E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene42534 | 0.803078 | 4.14E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene43075 | 0.806157 | 9.43E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene45425 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene055083 | MS.gene45995 | 0.913851 | 3.81E-84 | -1.69E-46 |
| MS.gene055083 | MS.gene46857 | 0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene47768 | 0.814412 | 1.56E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene48519 | 0.809973 | 1.45E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene49313 | 0.80329 | 3.74E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene53321 | 0.800946 | 1.13E-48 | -1.69E-46 |
| MS.gene055083 | MS.gene56169 | 0.804442 | 2.16E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene62491 | 0.835241 | 1.88E-56 | -1.69E-46 |
| MS.gene055083 | MS.gene62916 | 0.802257 | 6.11E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene64934 | 0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene69459 | 0.805403 | 1.36E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene76314 | 0.804023 | 2.64E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene76518 | 0.844977 | 5.41E-59 | -1.69E-46 |
| MS.gene055083 | MS.gene83055 | 0.818845 | 1.58E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene85133 | 0.842354 | 2.72E-58 | -1.69E-46 |
| MS.gene055083 | MS.gene86799 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene88171 | 0.822449 | 2.36E-53 | -1.69E-46 |
| MS.gene055083 | MS.gene88592 | 0.805107 | 1.57E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene90646 | 0.811635 | 6.34E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene91114 | 0.811958 | 5.40E-51 | -1.69E-46 |
| MS.gene055083 | MS.gene94764 | 0.913571 | 5.28E-84 | -1.69E-46 |
| MS.gene055083 | MS.gene95438 | 0.802753 | 4.83E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene95698 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene97017 | 0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene055083 | MS.gene98611 | 0.826953 | 2.04E-54 | -1.69E-46 |
| MS.gene055083 | MS.gene98735 | 0.810265 | 1.26E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055083.t1 | MTR_7g066260 | 60.121 | 494 | 133 | 9 | 10 | 444 | 3 | 491 | 0.0 | 541 |
| MS.gene055083.t1 | MTR_7g066360 | 56.122 | 490 | 151 | 8 | 9 | 445 | 1 | 479 | 2.68e-158 | 456 |
| MS.gene055083.t1 | MTR_7g066340 | 53.261 | 460 | 167 | 7 | 12 | 431 | 2 | 453 | 2.43e-152 | 441 |
| MS.gene055083.t1 | MTR_7g066290 | 54.741 | 464 | 135 | 6 | 10 | 431 | 3 | 433 | 1.47e-150 | 435 |
| MS.gene055083.t1 | MTR_7g066570 | 53.704 | 486 | 156 | 11 | 9 | 431 | 1 | 480 | 4.31e-149 | 436 |
| MS.gene055083.t1 | MTR_7g012680 | 54.066 | 455 | 167 | 10 | 9 | 431 | 1 | 445 | 4.34e-142 | 414 |
| MS.gene055083.t1 | MTR_7g066350 | 53.111 | 450 | 162 | 9 | 18 | 427 | 5 | 445 | 2.44e-140 | 410 |
| MS.gene055083.t1 | MTR_1g041315 | 49.890 | 455 | 176 | 6 | 9 | 415 | 1 | 451 | 2.26e-134 | 395 |
| MS.gene055083.t1 | MTR_7g066310 | 51.069 | 421 | 157 | 7 | 19 | 431 | 4 | 383 | 1.45e-128 | 378 |
| MS.gene055083.t1 | MTR_7g058710 | 47.887 | 497 | 169 | 12 | 9 | 433 | 1 | 479 | 2.65e-125 | 372 |
| MS.gene055083.t1 | MTR_7g066400 | 47.957 | 465 | 160 | 12 | 12 | 427 | 2 | 433 | 2.34e-124 | 369 |
| MS.gene055083.t1 | MTR_7g066580 | 49.330 | 448 | 174 | 12 | 28 | 428 | 1 | 442 | 4.81e-122 | 363 |
| MS.gene055083.t1 | MTR_1g014060 | 48.095 | 420 | 151 | 12 | 33 | 431 | 11 | 384 | 2.81e-108 | 325 |
| MS.gene055083.t1 | MTR_2g029400 | 43.973 | 448 | 173 | 9 | 9 | 421 | 1 | 405 | 7.61e-104 | 315 |
| MS.gene055083.t1 | MTR_7g066430 | 39.721 | 501 | 224 | 10 | 20 | 445 | 2 | 499 | 7.25e-101 | 310 |
| MS.gene055083.t1 | MTR_7g058700 | 45.898 | 451 | 127 | 12 | 36 | 431 | 533 | 921 | 3.81e-98 | 314 |
| MS.gene055083.t1 | MTR_7g066410 | 38.370 | 503 | 215 | 11 | 23 | 431 | 11 | 512 | 1.96e-94 | 294 |
| MS.gene055083.t1 | MTR_7g066480 | 40.899 | 445 | 193 | 7 | 20 | 431 | 14 | 421 | 1.80e-90 | 281 |
| MS.gene055083.t1 | MTR_7g066490 | 41.014 | 434 | 190 | 8 | 22 | 431 | 16 | 407 | 1.33e-87 | 273 |
| MS.gene055083.t1 | MTR_7g062300 | 38.923 | 483 | 217 | 11 | 12 | 429 | 2 | 471 | 2.85e-87 | 274 |
| MS.gene055083.t1 | MTR_7g062280 | 37.349 | 498 | 218 | 10 | 16 | 433 | 4 | 487 | 1.01e-86 | 273 |
| MS.gene055083.t1 | MTR_7g066280 | 42.927 | 410 | 155 | 10 | 101 | 441 | 1 | 400 | 1.06e-85 | 268 |
| MS.gene055083.t1 | MTR_7g063660 | 37.449 | 486 | 219 | 10 | 17 | 433 | 4 | 473 | 1.70e-85 | 270 |
| MS.gene055083.t1 | MTR_7g063830 | 38.330 | 467 | 213 | 11 | 16 | 435 | 4 | 442 | 2.69e-82 | 260 |
| MS.gene055083.t1 | MTR_7g063920 | 37.395 | 476 | 203 | 7 | 9 | 433 | 1 | 432 | 6.47e-82 | 259 |
| MS.gene055083.t1 | MTR_7g063900 | 39.425 | 487 | 200 | 11 | 22 | 429 | 10 | 480 | 6.66e-80 | 256 |
| MS.gene055083.t1 | MTR_7g063900 | 26.126 | 222 | 128 | 7 | 237 | 425 | 8 | 226 | 6.07e-14 | 73.9 |
| MS.gene055083.t1 | MTR_7g063820 | 38.677 | 499 | 219 | 13 | 16 | 444 | 3 | 484 | 7.09e-79 | 253 |
| MS.gene055083.t1 | MTR_7g063840 | 37.888 | 483 | 220 | 14 | 14 | 433 | 4 | 469 | 1.45e-78 | 252 |
| MS.gene055083.t1 | MTR_7g063880 | 38.259 | 494 | 202 | 16 | 9 | 431 | 1 | 462 | 5.95e-78 | 250 |
| MS.gene055083.t1 | MTR_3g007740 | 39.871 | 464 | 197 | 14 | 21 | 431 | 8 | 442 | 5.79e-76 | 244 |
| MS.gene055083.t1 | MTR_4g019310 | 34.302 | 516 | 232 | 15 | 16 | 444 | 2 | 497 | 3.09e-75 | 244 |
| MS.gene055083.t1 | MTR_7g063670 | 37.961 | 461 | 205 | 11 | 23 | 429 | 16 | 449 | 8.53e-74 | 239 |
| MS.gene055083.t1 | MTR_7g063890 | 38.086 | 491 | 210 | 13 | 21 | 433 | 26 | 500 | 2.55e-68 | 226 |
| MS.gene055083.t1 | MTR_7g066680 | 44.231 | 312 | 109 | 7 | 189 | 440 | 38 | 344 | 1.38e-62 | 206 |
| MS.gene055083.t1 | MTR_3g065200 | 35.111 | 450 | 195 | 14 | 22 | 418 | 3 | 408 | 1.30e-61 | 207 |
| MS.gene055083.t1 | MTR_4g017440 | 32.563 | 519 | 243 | 16 | 9 | 434 | 1 | 505 | 1.62e-60 | 205 |
| MS.gene055083.t1 | MTR_4g017830 | 31.041 | 509 | 251 | 15 | 12 | 430 | 2 | 500 | 1.44e-59 | 203 |
| MS.gene055083.t1 | MTR_4g019340 | 32.636 | 478 | 226 | 14 | 23 | 419 | 39 | 501 | 1.17e-58 | 200 |
| MS.gene055083.t1 | MTR_4g019340 | 32.787 | 122 | 62 | 3 | 22 | 130 | 303 | 417 | 8.82e-11 | 64.3 |
| MS.gene055083.t1 | MTR_4g017410 | 31.237 | 493 | 257 | 16 | 16 | 434 | 3 | 487 | 2.99e-56 | 194 |
| MS.gene055083.t1 | MTR_4g017610 | 31.643 | 493 | 242 | 17 | 11 | 427 | 2 | 475 | 6.00e-56 | 192 |
| MS.gene055083.t1 | MTR_7g066390 | 56.579 | 152 | 36 | 1 | 280 | 431 | 1 | 122 | 2.00e-45 | 155 |
| MS.gene055083.t1 | MTR_4g017550 | 30.687 | 466 | 226 | 18 | 49 | 429 | 18 | 471 | 3.01e-45 | 164 |
| MS.gene055083.t1 | MTR_4g017550 | 30.568 | 229 | 119 | 8 | 3 | 209 | 233 | 443 | 1.32e-12 | 69.7 |
| MS.gene055083.t1 | MTR_4g017470 | 29.184 | 490 | 262 | 15 | 12 | 434 | 2 | 473 | 1.74e-44 | 162 |
| MS.gene055083.t1 | MTR_7g063720 | 40.796 | 201 | 108 | 3 | 242 | 431 | 26 | 226 | 4.62e-39 | 141 |
| MS.gene055083.t1 | MTR_7g063720 | 27.907 | 215 | 122 | 8 | 3 | 211 | 8 | 195 | 1.20e-12 | 67.8 |
| MS.gene055083.t1 | MTR_7g062270 | 42.703 | 185 | 87 | 6 | 13 | 186 | 2 | 178 | 3.91e-31 | 123 |
| MS.gene055083.t1 | MTR_2g067310 | 45.161 | 155 | 50 | 4 | 33 | 187 | 58 | 177 | 2.33e-29 | 115 |
| MS.gene055083.t1 | MTR_7g100420 | 33.571 | 280 | 145 | 8 | 189 | 438 | 135 | 403 | 9.37e-27 | 111 |
| MS.gene055083.t1 | MTR_7g100420 | 59.322 | 59 | 20 | 1 | 23 | 77 | 40 | 98 | 4.05e-12 | 68.2 |
| MS.gene055083.t1 | MTR_8g023240 | 27.409 | 467 | 254 | 14 | 23 | 425 | 38 | 483 | 5.12e-25 | 108 |
| MS.gene055083.t1 | MTR_7g063690 | 30.345 | 290 | 102 | 7 | 9 | 266 | 1 | 222 | 1.67e-22 | 96.3 |
| MS.gene055083.t1 | MTR_7g063850 | 30.594 | 219 | 118 | 4 | 242 | 431 | 69 | 282 | 1.23e-21 | 95.1 |
| MS.gene055083.t1 | MTR_8g445860 | 27.273 | 231 | 132 | 7 | 228 | 424 | 3 | 231 | 2.45e-17 | 81.6 |
| MS.gene055083.t1 | MTR_8g445860 | 28.216 | 241 | 123 | 8 | 14 | 211 | 5 | 238 | 1.56e-16 | 79.3 |
| MS.gene055083.t1 | MTR_1g115440 | 29.339 | 242 | 122 | 5 | 13 | 210 | 2 | 238 | 2.56e-17 | 81.6 |
| MS.gene055083.t1 | MTR_4g019330 | 32.143 | 196 | 90 | 6 | 253 | 444 | 32 | 188 | 1.87e-16 | 77.8 |
| MS.gene055083.t1 | MTR_4g019240 | 39.823 | 113 | 58 | 4 | 18 | 122 | 9 | 119 | 1.91e-16 | 77.8 |
| MS.gene055083.t1 | MTR_0150s0010 | 26.971 | 241 | 123 | 5 | 16 | 210 | 4 | 237 | 1.43e-14 | 73.6 |
| MS.gene055083.t1 | MTR_1g115450 | 32.558 | 129 | 74 | 3 | 17 | 140 | 2 | 122 | 5.36e-14 | 69.3 |
| MS.gene055083.t1 | MTR_0150s0030 | 38.750 | 80 | 44 | 1 | 16 | 95 | 2 | 76 | 4.42e-13 | 68.6 |
| MS.gene055083.t1 | MTR_7g063760 | 50.794 | 63 | 30 | 1 | 368 | 429 | 3 | 65 | 4.61e-13 | 64.7 |
| MS.gene055083.t1 | MTR_1g115455 | 39.560 | 91 | 50 | 1 | 16 | 106 | 3 | 88 | 5.67e-13 | 68.6 |
| MS.gene055083.t1 | MTR_8g445920 | 38.824 | 85 | 47 | 1 | 16 | 100 | 4 | 83 | 6.88e-13 | 65.5 |
| MS.gene055083.t1 | MTR_8g044890 | 38.824 | 85 | 47 | 1 | 16 | 100 | 4 | 83 | 6.88e-13 | 65.5 |
| MS.gene055083.t1 | MTR_8g445910 | 40.000 | 80 | 43 | 1 | 16 | 95 | 2 | 76 | 3.73e-12 | 67.0 |
| MS.gene055083.t1 | MTR_8g044880 | 40.000 | 80 | 43 | 1 | 16 | 95 | 2 | 76 | 4.61e-12 | 66.6 |
| MS.gene055083.t1 | MTR_7g063870 | 56.364 | 55 | 24 | 0 | 16 | 70 | 25 | 79 | 7.49e-12 | 65.9 |
| MS.gene055083.t1 | MTR_1g115470 | 37.113 | 97 | 54 | 2 | 22 | 116 | 6 | 97 | 2.83e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055083.t1 | AT5G01150 | 29.835 | 486 | 263 | 11 | 15 | 431 | 3 | 479 | 3.25e-46 | 167 |
| MS.gene055083.t1 | AT5G01130 | 30.398 | 477 | 257 | 13 | 15 | 444 | 3 | 451 | 4.47e-46 | 166 |
| MS.gene055083.t1 | AT5G01120 | 28.858 | 499 | 277 | 11 | 23 | 444 | 10 | 507 | 9.95e-45 | 163 |
| MS.gene055083.t1 | AT3G09140 | 29.555 | 494 | 265 | 13 | 17 | 431 | 4 | 493 | 2.60e-43 | 159 |
| MS.gene055083.t1 | AT3G09140 | 28.681 | 523 | 260 | 17 | 17 | 431 | 4 | 521 | 5.30e-39 | 148 |
| MS.gene055083.t1 | AT5G43240 | 28.689 | 488 | 257 | 12 | 23 | 427 | 10 | 489 | 2.07e-38 | 146 |
| MS.gene055083.t1 | AT5G43240 | 28.689 | 488 | 257 | 12 | 23 | 427 | 10 | 489 | 2.07e-38 | 146 |
| MS.gene055083.t1 | AT5G43240 | 28.689 | 488 | 257 | 12 | 23 | 427 | 10 | 489 | 2.07e-38 | 146 |
| MS.gene055083.t1 | AT5G01140 | 28.074 | 488 | 263 | 12 | 15 | 445 | 3 | 459 | 2.25e-37 | 142 |
| MS.gene055083.t1 | AT3G09110 | 30.745 | 322 | 176 | 6 | 22 | 304 | 9 | 322 | 1.33e-36 | 137 |
| MS.gene055083.t1 | AT3G09120 | 32.704 | 318 | 158 | 12 | 19 | 290 | 3 | 310 | 4.66e-32 | 124 |
| MS.gene055083.t1 | AT5G37320 | 27.214 | 463 | 262 | 14 | 33 | 427 | 20 | 475 | 2.53e-30 | 122 |
Find 72 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATTGAAGCAGTGAAATT+TGG | 0.215494 | 7.4:+38188198 | MS.gene055083:CDS |
| AAGAGTGCCATTAACAATTA+TGG | 0.233920 | 7.4:+38189251 | MS.gene055083:CDS |
| GATCCTAAATCCTCTCTTTC+GGG | 0.240762 | 7.4:+38189219 | MS.gene055083:CDS |
| AAATCTTTGACCACAGATAT+TGG | 0.298129 | 7.4:-38188263 | None:intergenic |
| TGATCCTAAATCCTCTCTTT+CGG | 0.322652 | 7.4:+38189218 | MS.gene055083:CDS |
| GATTTGTTTCTTGATGAAAA+TGG | 0.322690 | 7.4:+38188471 | MS.gene055083:CDS |
| GTGTCTTTGTGGACGGTTTA+CGG | 0.348361 | 7.4:+38188425 | MS.gene055083:CDS |
| GAGGAAATCGTCGTTGATAT+TGG | 0.356532 | 7.4:+38189360 | MS.gene055083:CDS |
| CAAAGTTAGCTTGAAAGTTA+TGG | 0.360081 | 7.4:+38188056 | MS.gene055083:CDS |
| CCTCCCGAAAGAGAGGATTT+AGG | 0.363934 | 7.4:-38189222 | None:intergenic |
| ATTTCCTCTATGTCATTTAG+AGG | 0.364076 | 7.4:-38189345 | None:intergenic |
| TCCGTAACCATAATTGTTAA+TGG | 0.379272 | 7.4:-38189258 | None:intergenic |
| AGTTTCTTAACATTGCCTTT+AGG | 0.383949 | 7.4:+38188144 | MS.gene055083:CDS |
| TCCACTCGAAACATTCTGTT+TGG | 0.394895 | 7.4:+38188913 | MS.gene055083:CDS |
| GCCATTAACAATTATGGTTA+CGG | 0.409007 | 7.4:+38189257 | MS.gene055083:CDS |
| TAACCTTCCATTGAGTTCCT+TGG | 0.415613 | 7.4:-38188306 | None:intergenic |
| GCTGCGTTTACTCACAAATC+AGG | 0.417974 | 7.4:+38189174 | MS.gene055083:CDS |
| GAAGAGGGTAAGATTGGTAT+TGG | 0.419917 | 7.4:+38188832 | MS.gene055083:CDS |
| ACTCACCTATGTACTGTTTG+AGG | 0.434750 | 7.4:-38189536 | None:intergenic |
| TGCAAATCAATCAAGTGAAC+AGG | 0.437476 | 7.4:+38188029 | MS.gene055083:CDS |
| CCATCTGAAGAGGGTAAGAT+TGG | 0.438944 | 7.4:+38188826 | MS.gene055083:CDS |
| AAGTTATGGTGGACAAAGTA+AGG | 0.476932 | 7.4:+38188070 | MS.gene055083:CDS |
| CAATATTCAGCTTGAGCTTG+TGG | 0.489898 | 7.4:-38188332 | None:intergenic |
| GGTAAGATTGGTATTGGAAA+GGG | 0.492219 | 7.4:+38188838 | MS.gene055083:CDS |
| AATATCAATGCAGCTTAAAG+AGG | 0.495387 | 7.4:-38189022 | None:intergenic |
| TGGAATCAGAAGTGTCTTTG+TGG | 0.499620 | 7.4:+38188414 | MS.gene055083:CDS |
| GGAGTGTTGCAAATGCTAGA+AGG | 0.519900 | 7.4:+38188994 | MS.gene055083:CDS |
| TGGTTCCTTACTCCCAATGT+AGG | 0.523927 | 7.4:-38189132 | None:intergenic |
| ATCAGAAGTGTCTTTGTGGA+CGG | 0.527393 | 7.4:+38188418 | MS.gene055083:CDS |
| TCAACATCTGCTTTGACTGA+TGG | 0.527773 | 7.4:+38189513 | MS.gene055083:CDS |
| TCATCAAGAAACAAATCTCT+CGG | 0.528729 | 7.4:-38188465 | None:intergenic |
| AAAGTTGTGTATGCTGAGGC+TGG | 0.537208 | 7.4:+38188096 | MS.gene055083:CDS |
| TCTGACCGCAAACATCTCTC+AGG | 0.547244 | 7.4:-38189072 | None:intergenic |
| AGTCTTGCAATAGTACCTAA+AGG | 0.556108 | 7.4:-38188159 | None:intergenic |
| ACAGCAACCAAGGAACTCAA+TGG | 0.558269 | 7.4:+38188299 | MS.gene055083:CDS |
| GGCTTATTCAGGTTGCACAT+AGG | 0.560310 | 7.4:-38190372 | None:intergenic |
| GGGTAAGATTGGTATTGGAA+AGG | 0.563253 | 7.4:+38188837 | MS.gene055083:CDS |
| ATACATCTGTAGTATTTCCT+CGG | 0.565957 | 7.4:-38188363 | None:intergenic |
| CGTCGTTGATATTGGAGTGA+AGG | 0.566925 | 7.4:+38189368 | MS.gene055083:CDS |
| TATTGCAAGACTCGTTGCTA+AGG | 0.567646 | 7.4:+38188170 | MS.gene055083:CDS |
| GGTCCCTCTAAATGACATAG+AGG | 0.569467 | 7.4:+38189341 | MS.gene055083:CDS |
| TTTCCTCTATGTCATTTAGA+GGG | 0.570470 | 7.4:-38189344 | None:intergenic |
| TGCAAATCCTCCCGAAAGAG+AGG | 0.577572 | 7.4:-38189229 | None:intergenic |
| GAAACCAACATATGCTGATG+AGG | 0.578752 | 7.4:+38188798 | MS.gene055083:CDS |
| AAGCCCTCATCAGCATATGT+TGG | 0.587767 | 7.4:-38188802 | None:intergenic |
| CAAGAAACAAATCTCTCGGA+CGG | 0.592120 | 7.4:-38188461 | None:intergenic |
| ACTACAGATGTATTCAATGT+GGG | 0.593405 | 7.4:+38188373 | MS.gene055083:CDS |
| CCAATCTTACCCTCTTCAGA+TGG | 0.593770 | 7.4:-38188826 | None:intergenic |
| AGTTAGCTTGAAAGTTATGG+TGG | 0.596863 | 7.4:+38188059 | MS.gene055083:CDS |
| CGTTGATATTGGAGTGAAGG+AGG | 0.598145 | 7.4:+38189371 | MS.gene055083:CDS |
| ATCAGCTTATCCTCTTCAGA+TGG | 0.598589 | 7.4:-38188865 | None:intergenic |
| ATCAGTCAAAGCAGATGTTG+AGG | 0.602869 | 7.4:-38189511 | None:intergenic |
| CCTAAATCCTCTCTTTCGGG+AGG | 0.609428 | 7.4:+38189222 | MS.gene055083:CDS |
| TTTAAGATAAAGTCTGTCAG+AGG | 0.614107 | 7.4:-38188772 | None:intergenic |
| AGGAAATGCTACAGCAACCA+AGG | 0.618418 | 7.4:+38188289 | MS.gene055083:CDS |
| ACACTATCAAATGATGACAC+TGG | 0.620139 | 7.4:-38189297 | None:intergenic |
| TGAGTCCTGAGAGATGTTTG+CGG | 0.621019 | 7.4:+38189067 | MS.gene055083:CDS |
| ACCAAACAGAATGTTTCGAG+TGG | 0.623174 | 7.4:-38188914 | None:intergenic |
| AAAGGGCTTACCATCTGAAG+AGG | 0.626078 | 7.4:+38188855 | MS.gene055083:CDS |
| TTCATATCTAGAGAGAATGA+AGG | 0.632183 | 7.4:+38189320 | MS.gene055083:CDS |
| TGAGGGCTTACCATCTGAAG+AGG | 0.633509 | 7.4:+38188816 | MS.gene055083:CDS |
| AAACCAACATATGCTGATGA+GGG | 0.634689 | 7.4:+38188799 | MS.gene055083:CDS |
| ATCTAGATCACCAATATCTG+TGG | 0.636073 | 7.4:+38188253 | MS.gene055083:CDS |
| GATGGCCTCAAACAGTACAT+AGG | 0.636964 | 7.4:+38189531 | MS.gene055083:CDS |
| TACTACAGATGTATTCAATG+TGG | 0.641904 | 7.4:+38188372 | MS.gene055083:CDS |
| CAACCAAGGAACTCAATGGA+AGG | 0.644395 | 7.4:+38188303 | MS.gene055083:CDS |
| TAGCAGTGCAATCTTTACAA+TGG | 0.647841 | 7.4:+38187999 | MS.gene055083:CDS |
| GAGGGCTTACCATCTGAAGA+GGG | 0.663821 | 7.4:+38188817 | MS.gene055083:CDS |
| GATCATTAGGGATCACACAA+AGG | 0.686381 | 7.4:-38188533 | None:intergenic |
| TCTGTGGTCAAAGATTTGCA+AGG | 0.689564 | 7.4:+38188269 | MS.gene055083:CDS |
| ATTTGCAACACTCCTCCCAG+AGG | 0.732067 | 7.4:-38188985 | None:intergenic |
| TGAATATTGATGACACACCG+AGG | 0.765078 | 7.4:+38188346 | MS.gene055083:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATTGATAAGAAATGTA+AGG | - | chr7.4:38189941-38189960 | None:intergenic | 15.0% |
| !! | TTTGCATTAATGTAAATAAA+TGG | - | chr7.4:38189789-38189808 | None:intergenic | 15.0% |
| !! | ATTCAAAAGTTATATGTGAA+GGG | + | chr7.4:38189685-38189704 | MS.gene055083:intron | 20.0% |
| !! | CTTTAATAATCATTTGTACA+TGG | - | chr7.4:38190041-38190060 | None:intergenic | 20.0% |
| !! | TATTCAAAAGTTATATGTGA+AGG | + | chr7.4:38189684-38189703 | MS.gene055083:intron | 20.0% |
| !! | TTATATATCTGTGTAATGAA+AGG | + | chr7.4:38190001-38190020 | MS.gene055083:intron | 20.0% |
| ! | AATATTGAAGCAGTGAAATT+TGG | + | chr7.4:38188198-38188217 | MS.gene055083:CDS | 25.0% |
| ! | ATTTACATTAATGCAAATCG+TGG | + | chr7.4:38189792-38189811 | MS.gene055083:intron | 25.0% |
| ! | CGAGAAATATTAAAAGGAAA+AGG | - | chr7.4:38189429-38189448 | None:intergenic | 25.0% |
| ! | CTTCTGATTCCAAATAAAAA+TGG | - | chr7.4:38188406-38188425 | None:intergenic | 25.0% |
| ! | TACCATCTTCACATAAAAAT+TGG | + | chr7.4:38189739-38189758 | MS.gene055083:intron | 25.0% |
| ! | TATCTAATATCTATTGTGCA+GGG | + | chr7.4:38189462-38189481 | MS.gene055083:intron | 25.0% |
| ! | TGCAATCGAGAAATATTAAA+AGG | - | chr7.4:38189435-38189454 | None:intergenic | 25.0% |
| ! | TTCAAAAGTTATATGTGAAG+GGG | + | chr7.4:38189686-38189705 | MS.gene055083:intron | 25.0% |
| ! | TTTACATTAATGCAAATCGT+GGG | + | chr7.4:38189793-38189812 | MS.gene055083:intron | 25.0% |
| !! | ATAATGTCTAAAGTGTTATG+AGG | - | chr7.4:38189583-38189602 | None:intergenic | 25.0% |
| !! | ATAGGTATACTTGATGATTA+AGG | - | chr7.4:38190311-38190330 | None:intergenic | 25.0% |
| !! | GATTTGTTTCTTGATGAAAA+TGG | + | chr7.4:38188471-38188490 | MS.gene055083:CDS | 25.0% |
| !!! | TGATCTTTTTTCCTTAATCA+TGG | + | chr7.4:38190175-38190194 | MS.gene055083:intron | 25.0% |
| !!! | TGATGAAAATGGTTTTGTTA+TGG | + | chr7.4:38188482-38188501 | MS.gene055083:CDS | 25.0% |
| AAAAAGAAGAGTTGGAAGAA+AGG | + | chr7.4:38190125-38190144 | MS.gene055083:intron | 30.0% | |
| AAATCTTTGACCACAGATAT+TGG | - | chr7.4:38188266-38188285 | None:intergenic | 30.0% | |
| AAGTAAGTGGTTAACTCATT+CGG | - | chr7.4:38189714-38189733 | None:intergenic | 30.0% | |
| AATATCAATGCAGCTTAAAG+AGG | - | chr7.4:38189025-38189044 | None:intergenic | 30.0% | |
| ACTACAGATGTATTCAATGT+GGG | + | chr7.4:38188373-38188392 | MS.gene055083:CDS | 30.0% | |
| AGCTAGTGTGAAATATATAG+AGG | + | chr7.4:38190059-38190078 | MS.gene055083:intron | 30.0% | |
| AGTTTCTTAACATTGCCTTT+AGG | + | chr7.4:38188144-38188163 | MS.gene055083:CDS | 30.0% | |
| ATACATCTGTAGTATTTCCT+CGG | - | chr7.4:38188366-38188385 | None:intergenic | 30.0% | |
| ATGTCTGTGTTTATATGTGT+AGG | + | chr7.4:38188711-38188730 | MS.gene055083:intron | 30.0% | |
| CAATTCATGCTTAAAAACAC+TGG | + | chr7.4:38189823-38189842 | MS.gene055083:intron | 30.0% | |
| GAACATAGAAAAAGAAGAGT+TGG | + | chr7.4:38190117-38190136 | MS.gene055083:intron | 30.0% | |
| GACAGTTAATGTTGAGTAAA+TGG | + | chr7.4:38190081-38190100 | MS.gene055083:intron | 30.0% | |
| GCCATTAACAATTATGGTTA+CGG | + | chr7.4:38189257-38189276 | MS.gene055083:CDS | 30.0% | |
| GTATCTAATATCTATTGTGC+AGG | + | chr7.4:38189461-38189480 | MS.gene055083:intron | 30.0% | |
| TAAAAATTGGCAAACCAGTA+AGG | + | chr7.4:38189752-38189771 | MS.gene055083:intron | 30.0% | |
| TACTACAGATGTATTCAATG+TGG | + | chr7.4:38188372-38188391 | MS.gene055083:CDS | 30.0% | |
| TCATCAAGAAACAAATCTCT+CGG | - | chr7.4:38188468-38188487 | None:intergenic | 30.0% | |
| TCCGTAACCATAATTGTTAA+TGG | - | chr7.4:38189261-38189280 | None:intergenic | 30.0% | |
| TTCACACCATGATTAAATTG+AGG | - | chr7.4:38190276-38190295 | None:intergenic | 30.0% | |
| TTCATATCTAGAGAGAATGA+AGG | + | chr7.4:38189320-38189339 | MS.gene055083:CDS | 30.0% | |
| ! | AGCAAATGTAGACTTTTAAC+TGG | - | chr7.4:38188558-38188577 | None:intergenic | 30.0% |
| ! | ATTTCCTCTATGTCATTTAG+AGG | - | chr7.4:38189348-38189367 | None:intergenic | 30.0% |
| ! | CAAAGTTAGCTTGAAAGTTA+TGG | + | chr7.4:38188056-38188075 | MS.gene055083:CDS | 30.0% |
| ! | TACTCACAAATCAGGTTTTA+AGG | + | chr7.4:38189182-38189201 | MS.gene055083:CDS | 30.0% |
| ! | TGCCAATTTTTATGTGAAGA+TGG | - | chr7.4:38189744-38189763 | None:intergenic | 30.0% |
| ! | TTTAAGATAAAGTCTGTCAG+AGG | - | chr7.4:38188775-38188794 | None:intergenic | 30.0% |
| ! | TTTCCTCTATGTCATTTAGA+GGG | - | chr7.4:38189347-38189366 | None:intergenic | 30.0% |
| !! | AAGAGTGCCATTAACAATTA+TGG | + | chr7.4:38189251-38189270 | MS.gene055083:CDS | 30.0% |
| !! | AGACTTTTAACTGGATCATT+AGG | - | chr7.4:38188549-38188568 | None:intergenic | 30.0% |
| !! | GACTTTTAACTGGATCATTA+GGG | - | chr7.4:38188548-38188567 | None:intergenic | 30.0% |
| !! | GGAGATTGACCATTTTTATT+TGG | + | chr7.4:38188394-38188413 | MS.gene055083:CDS | 30.0% |
| !! | GTTTTTAAGCATGAATTGAG+TGG | - | chr7.4:38189821-38189840 | None:intergenic | 30.0% |
| !!! | AAGTGTTATGAGGTTTTGTT+TGG | - | chr7.4:38189573-38189592 | None:intergenic | 30.0% |
| !!! | CTGTTTTGATTGGTAATATC+TGG | - | chr7.4:38189155-38189174 | None:intergenic | 30.0% |
| !!! | TTTCTTCTTTTGGCTTATTC+AGG | - | chr7.4:38190386-38190405 | None:intergenic | 30.0% |
| AAACCAACATATGCTGATGA+GGG | + | chr7.4:38188799-38188818 | MS.gene055083:CDS | 35.0% | |
| ACACTATCAAATGATGACAC+TGG | - | chr7.4:38189300-38189319 | None:intergenic | 35.0% | |
| AGATGGTAGTAGTAAGTAAG+TGG | - | chr7.4:38189727-38189746 | None:intergenic | 35.0% | |
| AGTCTTGCAATAGTACCTAA+AGG | - | chr7.4:38188162-38188181 | None:intergenic | 35.0% | |
| ATCTAGATCACCAATATCTG+TGG | + | chr7.4:38188253-38188272 | MS.gene055083:CDS | 35.0% | |
| CTACATTTGCTTCAGATGAA+TGG | + | chr7.4:38188567-38188586 | MS.gene055083:intron | 35.0% | |
| GAAAAAAGTTGTGTATGCTG+AGG | + | chr7.4:38188092-38188111 | MS.gene055083:CDS | 35.0% | |
| GAAACAAGTCACCATGATTA+AGG | - | chr7.4:38190189-38190208 | None:intergenic | 35.0% | |
| GACGACAAATTAGACAGAAT+AGG | - | chr7.4:38190329-38190348 | None:intergenic | 35.0% | |
| GAGAGAAAAACGCTACTTAT+CGG | + | chr7.4:38188612-38188631 | MS.gene055083:intron | 35.0% | |
| GTGCAACCTCAATTTAATCA+TGG | + | chr7.4:38190267-38190286 | MS.gene055083:intron | 35.0% | |
| TAGCAGTGCAATCTTTACAA+TGG | + | chr7.4:38187999-38188018 | MS.gene055083:CDS | 35.0% | |
| TGATCCTAAATCCTCTCTTT+CGG | + | chr7.4:38189218-38189237 | MS.gene055083:CDS | 35.0% | |
| TGCAAATCAATCAAGTGAAC+AGG | + | chr7.4:38188029-38188048 | MS.gene055083:CDS | 35.0% | |
| ! | AGTTAGCTTGAAAGTTATGG+TGG | + | chr7.4:38188059-38188078 | MS.gene055083:CDS | 35.0% |
| ! | CCTCGAATTTTTCCTACATT+GGG | + | chr7.4:38189120-38189139 | MS.gene055083:CDS | 35.0% |
| ! | GGTAAGATTGGTATTGGAAA+GGG | + | chr7.4:38188838-38188857 | MS.gene055083:CDS | 35.0% |
| ! | TATAGCTGACGAAGATTTTG+CGG | + | chr7.4:38188936-38188955 | MS.gene055083:CDS | 35.0% |
| ! | TTTTTCCTACATTGGGAGTA+AGG | + | chr7.4:38189127-38189146 | MS.gene055083:CDS | 35.0% |
| !! | AAGTTATGGTGGACAAAGTA+AGG | + | chr7.4:38188070-38188089 | MS.gene055083:CDS | 35.0% |
| !! | AGTTTTCTCACTTTTCCTCT+GGG | + | chr7.4:38188970-38188989 | MS.gene055083:CDS | 35.0% |
| !! | TGGTTATTTCTGATCCTTAC+TGG | - | chr7.4:38189769-38189788 | None:intergenic | 35.0% |
| ACCAAACAGAATGTTTCGAG+TGG | - | chr7.4:38188917-38188936 | None:intergenic | 40.0% | |
| ACTCACCTATGTACTGTTTG+AGG | - | chr7.4:38189539-38189558 | None:intergenic | 40.0% | |
| ATCAGCTTATCCTCTTCAGA+TGG | - | chr7.4:38188868-38188887 | None:intergenic | 40.0% | |
| ATCAGTCAAAGCAGATGTTG+AGG | - | chr7.4:38189514-38189533 | None:intergenic | 40.0% | |
| ATTGGAGTGAAGGAGGTAAA+GGG | + | chr7.4:38189378-38189397 | MS.gene055083:intron | 40.0% | |
| CAAGAAACAAATCTCTCGGA+CGG | - | chr7.4:38188464-38188483 | None:intergenic | 40.0% | |
| CAATATTCAGCTTGAGCTTG+TGG | - | chr7.4:38188335-38188354 | None:intergenic | 40.0% | |
| CACATAGGATCATCTGTCAA+AGG | - | chr7.4:38190360-38190379 | None:intergenic | 40.0% | |
| CCCAATGTAGGAAAAATTCG+AGG | - | chr7.4:38189123-38189142 | None:intergenic | 40.0% | |
| GAAACCAACATATGCTGATG+AGG | + | chr7.4:38188798-38188817 | MS.gene055083:CDS | 40.0% | |
| GAAGAGGGTAAGATTGGTAT+TGG | + | chr7.4:38188832-38188851 | MS.gene055083:CDS | 40.0% | |
| GAGGAAATCGTCGTTGATAT+TGG | + | chr7.4:38189360-38189379 | MS.gene055083:CDS | 40.0% | |
| GATCATTAGGGATCACACAA+AGG | - | chr7.4:38188536-38188555 | None:intergenic | 40.0% | |
| GATCCTAAATCCTCTCTTTC+GGG | + | chr7.4:38189219-38189238 | MS.gene055083:CDS | 40.0% | |
| TAACCTTCCATTGAGTTCCT+TGG | - | chr7.4:38188309-38188328 | None:intergenic | 40.0% | |
| TATTGCAAGACTCGTTGCTA+AGG | + | chr7.4:38188170-38188189 | MS.gene055083:CDS | 40.0% | |
| TATTGGAGTGAAGGAGGTAA+AGG | + | chr7.4:38189377-38189396 | MS.gene055083:intron | 40.0% | |
| TCAACATCTGCTTTGACTGA+TGG | + | chr7.4:38189513-38189532 | MS.gene055083:CDS | 40.0% | |
| TCCACTCGAAACATTCTGTT+TGG | + | chr7.4:38188913-38188932 | MS.gene055083:CDS | 40.0% | |
| TCTGTGGTCAAAGATTTGCA+AGG | + | chr7.4:38188269-38188288 | MS.gene055083:CDS | 40.0% | |
| ! | GCCTCGAATTTTTCCTACAT+TGG | + | chr7.4:38189119-38189138 | MS.gene055083:CDS | 40.0% |
| ! | GGGTAAGATTGGTATTGGAA+AGG | + | chr7.4:38188837-38188856 | MS.gene055083:CDS | 40.0% |
| ! | TGAATATTGATGACACACCG+AGG | + | chr7.4:38188346-38188365 | MS.gene055083:CDS | 40.0% |
| !! | ATCAGAAGTGTCTTTGTGGA+CGG | + | chr7.4:38188418-38188437 | MS.gene055083:CDS | 40.0% |
| !! | CAGTTTTCTCACTTTTCCTC+TGG | + | chr7.4:38188969-38188988 | MS.gene055083:CDS | 40.0% |
| !! | TGGAATCAGAAGTGTCTTTG+TGG | + | chr7.4:38188414-38188433 | MS.gene055083:CDS | 40.0% |
| !!! | GTAAACGCAGCTGTTTTGAT+TGG | - | chr7.4:38189165-38189184 | None:intergenic | 40.0% |
| AAAGGGCTTACCATCTGAAG+AGG | + | chr7.4:38188855-38188874 | MS.gene055083:CDS | 45.0% | |
| AAAGTTGTGTATGCTGAGGC+TGG | + | chr7.4:38188096-38188115 | MS.gene055083:CDS | 45.0% | |
| AACGCTACTTATCGGCAAGA+AGG | + | chr7.4:38188620-38188639 | MS.gene055083:intron | 45.0% | |
| AAGCCCTCATCAGCATATGT+TGG | - | chr7.4:38188805-38188824 | None:intergenic | 45.0% | |
| ACAGCAACCAAGGAACTCAA+TGG | + | chr7.4:38188299-38188318 | MS.gene055083:CDS | 45.0% | |
| AGGAAATGCTACAGCAACCA+AGG | + | chr7.4:38188289-38188308 | MS.gene055083:CDS | 45.0% | |
| CAACCAAGGAACTCAATGGA+AGG | + | chr7.4:38188303-38188322 | MS.gene055083:CDS | 45.0% | |
| CCAATCTTACCCTCTTCAGA+TGG | - | chr7.4:38188829-38188848 | None:intergenic | 45.0% | |
| CCATCTGAAGAGGGTAAGAT+TGG | + | chr7.4:38188826-38188845 | MS.gene055083:CDS | 45.0% | |
| CGTCGTTGATATTGGAGTGA+AGG | + | chr7.4:38189368-38189387 | MS.gene055083:CDS | 45.0% | |
| CGTTGATATTGGAGTGAAGG+AGG | + | chr7.4:38189371-38189390 | MS.gene055083:CDS | 45.0% | |
| GATGGCCTCAAACAGTACAT+AGG | + | chr7.4:38189531-38189550 | MS.gene055083:CDS | 45.0% | |
| GCTGCGTTTACTCACAAATC+AGG | + | chr7.4:38189174-38189193 | MS.gene055083:CDS | 45.0% | |
| GGTCCCTCTAAATGACATAG+AGG | + | chr7.4:38189341-38189360 | MS.gene055083:CDS | 45.0% | |
| GTGTCTTTGTGGACGGTTTA+CGG | + | chr7.4:38188425-38188444 | MS.gene055083:CDS | 45.0% | |
| TGAGTCCTGAGAGATGTTTG+CGG | + | chr7.4:38189067-38189086 | MS.gene055083:CDS | 45.0% | |
| TGGTTCCTTACTCCCAATGT+AGG | - | chr7.4:38189135-38189154 | None:intergenic | 45.0% | |
| !! | GGAGTGTTGCAAATGCTAGA+AGG | + | chr7.4:38188994-38189013 | MS.gene055083:CDS | 45.0% |
| !! | GGCTTATTCAGGTTGCACAT+AGG | - | chr7.4:38190375-38190394 | None:intergenic | 45.0% |
| !! | TTTCTCACTTTTCCTCTGGG+AGG | + | chr7.4:38188973-38188992 | MS.gene055083:CDS | 45.0% |
| ATTTGCAACACTCCTCCCAG+AGG | - | chr7.4:38188988-38189007 | None:intergenic | 50.0% | |
| CCTAAATCCTCTCTTTCGGG+AGG | + | chr7.4:38189222-38189241 | MS.gene055083:CDS | 50.0% | |
| CCTCCCGAAAGAGAGGATTT+AGG | - | chr7.4:38189225-38189244 | None:intergenic | 50.0% | |
| GAGGGCTTACCATCTGAAGA+GGG | + | chr7.4:38188817-38188836 | MS.gene055083:CDS | 50.0% | |
| GCTACTTATCGGCAAGAAGG+AGG | + | chr7.4:38188623-38188642 | MS.gene055083:intron | 50.0% | |
| TCTGACCGCAAACATCTCTC+AGG | - | chr7.4:38189075-38189094 | None:intergenic | 50.0% | |
| TGAGGGCTTACCATCTGAAG+AGG | + | chr7.4:38188816-38188835 | MS.gene055083:CDS | 50.0% | |
| TGCAAATCCTCCCGAAAGAG+AGG | - | chr7.4:38189232-38189251 | None:intergenic | 50.0% | |
| !!! | CAGAGGCGTTTTCGAGAGCA+AGG | - | chr7.4:38188758-38188777 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 38187994 | 38190410 | 38187994 | ID=MS.gene055083 |
| chr7.4 | mRNA | 38187994 | 38190410 | 38187994 | ID=MS.gene055083.t1;Parent=MS.gene055083 |
| chr7.4 | exon | 38187994 | 38188557 | 38187994 | ID=MS.gene055083.t1.exon1;Parent=MS.gene055083.t1 |
| chr7.4 | CDS | 38187994 | 38188557 | 38187994 | ID=cds.MS.gene055083.t1;Parent=MS.gene055083.t1 |
| chr7.4 | exon | 38188733 | 38189392 | 38188733 | ID=MS.gene055083.t1.exon2;Parent=MS.gene055083.t1 |
| chr7.4 | CDS | 38188733 | 38189392 | 38188733 | ID=cds.MS.gene055083.t1;Parent=MS.gene055083.t1 |
| chr7.4 | exon | 38189483 | 38189552 | 38189483 | ID=MS.gene055083.t1.exon3;Parent=MS.gene055083.t1 |
| chr7.4 | CDS | 38189483 | 38189552 | 38189483 | ID=cds.MS.gene055083.t1;Parent=MS.gene055083.t1 |
| chr7.4 | exon | 38190367 | 38190410 | 38190367 | ID=MS.gene055083.t1.exon4;Parent=MS.gene055083.t1 |
| chr7.4 | CDS | 38190367 | 38190410 | 38190367 | ID=cds.MS.gene055083.t1;Parent=MS.gene055083.t1 |
| Gene Sequence |
| Protein sequence |
