Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44209.t1 | XP_024629125.1 | 98.9 | 715 | 6 | 1 | 1 | 715 | 1 | 713 | 0.00E+00 | 1156.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44209.t1 | Q9M1H3 | 75.8 | 724 | 165 | 3 | 1 | 715 | 1 | 723 | 2.4e-282 | 972.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44209.t1 | G7LB54 | 98.9 | 715 | 6 | 1 | 1 | 715 | 54 | 766 | 0.0e+00 | 1156.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69745 | MS.gene44209 | PPI |
| MS.gene31234 | MS.gene44209 | PPI |
| MS.gene44209 | MS.gene050086 | PPI |
| MS.gene044268 | MS.gene44209 | PPI |
| MS.gene028666 | MS.gene44209 | PPI |
| MS.gene25771 | MS.gene44209 | PPI |
| MS.gene70530 | MS.gene44209 | PPI |
| MS.gene98065 | MS.gene44209 | PPI |
| MS.gene054719 | MS.gene44209 | PPI |
| MS.gene40858 | MS.gene44209 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44209.t1 | MTR_8g075040 | 99.021 | 715 | 5 | 1 | 1 | 715 | 54 | 766 | 0.0 | 1436 |
| MS.gene44209.t1 | MTR_7g018380 | 98.042 | 715 | 14 | 0 | 1 | 715 | 1 | 715 | 0.0 | 1427 |
| MS.gene44209.t1 | MTR_1g066620 | 91.444 | 561 | 46 | 2 | 156 | 715 | 2 | 561 | 0.0 | 1053 |
| MS.gene44209.t1 | MTR_3g080970 | 39.941 | 676 | 356 | 16 | 41 | 705 | 74 | 710 | 8.53e-154 | 463 |
| MS.gene44209.t1 | MTR_2g095440 | 41.155 | 554 | 293 | 6 | 152 | 705 | 62 | 582 | 7.51e-149 | 446 |
| MS.gene44209.t1 | MTR_2g095440 | 40.942 | 552 | 293 | 6 | 154 | 705 | 4 | 522 | 4.70e-148 | 442 |
| MS.gene44209.t1 | MTR_2g095440 | 41.091 | 550 | 291 | 6 | 156 | 705 | 12 | 528 | 7.31e-148 | 442 |
| MS.gene44209.t1 | MTR_4g057795 | 41.155 | 554 | 293 | 7 | 152 | 705 | 62 | 582 | 8.81e-146 | 438 |
| MS.gene44209.t1 | MTR_4g057795 | 40.873 | 504 | 265 | 7 | 202 | 705 | 2 | 472 | 4.34e-129 | 391 |
| MS.gene44209.t1 | MTR_3g095010 | 29.680 | 593 | 364 | 15 | 144 | 715 | 96 | 656 | 5.07e-62 | 220 |
| MS.gene44209.t1 | MTR_1g063170 | 30.332 | 211 | 112 | 7 | 482 | 666 | 393 | 594 | 1.38e-13 | 75.1 |
| MS.gene44209.t1 | MTR_7g102070 | 30.332 | 211 | 112 | 7 | 482 | 666 | 420 | 621 | 2.18e-13 | 74.7 |
| MS.gene44209.t1 | MTR_4g124050 | 31.313 | 198 | 82 | 7 | 493 | 655 | 1055 | 1233 | 2.58e-13 | 74.3 |
| MS.gene44209.t1 | MTR_3g107800 | 31.034 | 203 | 86 | 7 | 488 | 655 | 1026 | 1209 | 1.15e-12 | 72.4 |
| MS.gene44209.t1 | MTR_6g011680 | 31.441 | 229 | 118 | 10 | 488 | 691 | 1008 | 1222 | 2.04e-12 | 71.2 |
| MS.gene44209.t1 | MTR_5g029750 | 28.509 | 228 | 126 | 10 | 488 | 691 | 989 | 1203 | 4.38e-12 | 70.5 |
| MS.gene44209.t1 | MTR_8g022270 | 26.786 | 224 | 135 | 7 | 488 | 691 | 598 | 812 | 1.13e-11 | 68.9 |
| MS.gene44209.t1 | MTR_3g093430 | 30.213 | 235 | 113 | 9 | 488 | 691 | 364 | 578 | 1.29e-11 | 68.9 |
| MS.gene44209.t1 | MTR_8g107410 | 30.144 | 209 | 105 | 6 | 167 | 366 | 34 | 210 | 2.61e-11 | 65.1 |
| MS.gene44209.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 2.86e-11 | 65.5 |
| MS.gene44209.t1 | MTR_7g079540 | 36.646 | 161 | 78 | 6 | 505 | 643 | 101 | 259 | 4.11e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44209.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1135 |
| MS.gene44209.t1 | AT3G54540 | 78.404 | 727 | 141 | 6 | 1 | 715 | 1 | 723 | 0.0 | 1135 |
| MS.gene44209.t1 | AT1G64550 | 39.435 | 672 | 346 | 14 | 52 | 705 | 83 | 711 | 2.97e-155 | 467 |
| MS.gene44209.t1 | AT5G60790 | 41.441 | 555 | 290 | 7 | 152 | 705 | 67 | 587 | 2.47e-146 | 440 |
| MS.gene44209.t1 | AT5G64840 | 28.970 | 573 | 362 | 10 | 145 | 703 | 89 | 630 | 2.34e-65 | 229 |
| MS.gene44209.t1 | AT5G09930 | 30.488 | 574 | 354 | 15 | 144 | 703 | 74 | 616 | 2.62e-62 | 221 |
| MS.gene44209.t1 | AT1G67940 | 33.023 | 215 | 102 | 9 | 161 | 366 | 37 | 218 | 4.21e-14 | 73.6 |
| MS.gene44209.t1 | AT3G28345 | 30.556 | 216 | 124 | 7 | 481 | 673 | 988 | 1200 | 3.69e-13 | 73.9 |
| MS.gene44209.t1 | AT2G36910 | 30.097 | 206 | 109 | 7 | 487 | 666 | 367 | 563 | 4.47e-13 | 73.6 |
| MS.gene44209.t1 | AT3G28390 | 31.718 | 227 | 112 | 10 | 493 | 691 | 985 | 1196 | 6.04e-13 | 73.2 |
| MS.gene44209.t1 | AT3G28860 | 31.222 | 221 | 121 | 9 | 492 | 691 | 1014 | 1224 | 1.72e-11 | 68.6 |
| MS.gene44209.t1 | AT1G70610 | 31.792 | 173 | 104 | 4 | 488 | 646 | 455 | 627 | 2.02e-11 | 67.8 |
| MS.gene44209.t1 | AT1G70610 | 30.337 | 178 | 100 | 5 | 488 | 646 | 274 | 446 | 2.39e-11 | 67.4 |
| MS.gene44209.t1 | AT4G25960 | 28.431 | 204 | 113 | 8 | 488 | 666 | 1030 | 1225 | 3.11e-11 | 67.8 |
| MS.gene44209.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 5.02e-11 | 67.0 |
| MS.gene44209.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 5.02e-11 | 67.0 |
| MS.gene44209.t1 | AT2G47000 | 28.958 | 259 | 118 | 10 | 488 | 710 | 1042 | 1270 | 5.02e-11 | 67.0 |
| MS.gene44209.t1 | AT3G28380 | 28.502 | 207 | 111 | 7 | 488 | 666 | 995 | 1192 | 6.16e-11 | 66.6 |
| MS.gene44209.t1 | AT1G10680 | 26.609 | 233 | 128 | 10 | 488 | 690 | 982 | 1201 | 9.01e-11 | 66.2 |
Find 169 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCAAAACTTGGTAAATA+TGG | 0.195660 | 8.1:-31950128 | MS.gene44209:CDS |
| CAGTGTATGCAGAAGCTTTC+GGG | 0.221638 | 8.1:+31951731 | None:intergenic |
| GAAGCTTTCGGGGCAGGTTT+TGG | 0.249610 | 8.1:+31951742 | None:intergenic |
| ATGAAGAACGGAGTCAAATA+TGG | 0.285206 | 8.1:-31949872 | MS.gene44209:CDS |
| GATGCTTTCACTGTTGTAAT+TGG | 0.287671 | 8.1:-31951520 | MS.gene44209:CDS |
| AGGCAAAGAAGGAAGCTCTT+AGG | 0.295120 | 8.1:-31951552 | MS.gene44209:CDS |
| CTCTGCCATGTTGGCAGGTA+TGG | 0.307869 | 8.1:-31951812 | MS.gene44209:CDS |
| TGTTGATGTTGGCATTGATA+TGG | 0.325155 | 8.1:-31950381 | MS.gene44209:CDS |
| GGAAAACGTTATGGTTTGAT+TGG | 0.326176 | 8.1:-31951367 | MS.gene44209:CDS |
| AAAAGCTGATAAGCCTAAAA+AGG | 0.327285 | 8.1:-31951785 | MS.gene44209:CDS |
| TAAGAATATTGATGTCCTTC+TGG | 0.328294 | 8.1:-31951281 | MS.gene44209:CDS |
| ACTTGTGTGGTACCTCTACT+TGG | 0.330518 | 8.1:+31950522 | None:intergenic |
| AGCTGCCCATGTGGCTGAAC+AGG | 0.335346 | 8.1:-31951572 | MS.gene44209:CDS |
| GCCTAAAATCCTCTCGGTTT+GGG | 0.340199 | 8.1:+31950411 | None:intergenic |
| ACCTCAAGTGGCTTCAAATC+TGG | 0.342071 | 8.1:+31951643 | None:intergenic |
| TGCATATCCAGATGATTTGT+AGG | 0.356331 | 8.1:+31949990 | None:intergenic |
| ATCTTGTTGAGCCTTGTTCC+CGG | 0.359673 | 8.1:+31950631 | None:intergenic |
| AGAAGGACATCAATATTCTT+AGG | 0.370684 | 8.1:+31951283 | None:intergenic |
| GAATCTTCTAGCTGGTGATT+TGG | 0.379502 | 8.1:-31950306 | MS.gene44209:CDS |
| TCTGTCTCTGCCATGTTGGC+AGG | 0.382181 | 8.1:-31951817 | MS.gene44209:CDS |
| ATATCTCATGGAAAACGTTA+TGG | 0.390477 | 8.1:-31951376 | MS.gene44209:CDS |
| TTGAAAGCAGCTAGAAGAAC+CGG | 0.393435 | 8.1:-31950650 | MS.gene44209:CDS |
| AGCCTAAAATCCTCTCGGTT+TGG | 0.396484 | 8.1:+31950410 | None:intergenic |
| TCAGTGTATGCAGAAGCTTT+CGG | 0.398636 | 8.1:+31951730 | None:intergenic |
| CACTGTTGTAATTGGAAGTC+GGG | 0.401671 | 8.1:-31951512 | MS.gene44209:CDS |
| GTTGCCATCGTTGGGCCTAA+TGG | 0.402218 | 8.1:-31950350 | MS.gene44209:CDS |
| TGGCACTGTTAGAAATTTCC+CGG | 0.404656 | 8.1:-31949838 | MS.gene44209:CDS |
| GGTGTGAGTTCAGTGGGTTC+AGG | 0.404849 | 8.1:+31950470 | None:intergenic |
| TTGTAATCCTCAAATGTTCC+CGG | 0.406848 | 8.1:+31949819 | None:intergenic |
| GGGACTCGTGTTGCCATCGT+TGG | 0.415761 | 8.1:-31950359 | MS.gene44209:CDS |
| CTTCGAACTTCACCTTCACT+TGG | 0.420634 | 8.1:+31950281 | None:intergenic |
| TTACTAAGCCCCTCCTGGTC+TGG | 0.421538 | 8.1:+31950164 | None:intergenic |
| TCTTTGCCTGTTCAGCCACA+TGG | 0.423166 | 8.1:+31951566 | None:intergenic |
| GGCAAAGAAGGAAGCTCTTA+GGG | 0.426538 | 8.1:-31951551 | MS.gene44209:CDS |
| GAAAACGTTATGGTTTGATT+GGG | 0.428668 | 8.1:-31951366 | MS.gene44209:CDS |
| GATCTACAAAATATAGCTTC+TGG | 0.431690 | 8.1:-31951166 | MS.gene44209:CDS |
| CCTGGTTTAGCCTTTGAAGA+TGG | 0.434308 | 8.1:+31951871 | None:intergenic |
| GAGATATTCCCAACACTTTG+TGG | 0.436079 | 8.1:-31950237 | MS.gene44209:CDS |
| GAAGTCAGAAGTTGAGGATA+GGG | 0.442070 | 8.1:-31950259 | MS.gene44209:CDS |
| CCTCCTGATAGTTTGACAAT+GGG | 0.445696 | 8.1:+31950080 | None:intergenic |
| CACTAATCATCTTGACTTGA+GGG | 0.447004 | 8.1:-31950888 | MS.gene44209:CDS |
| TATGCAGAAGCTTTCGGGGC+AGG | 0.452904 | 8.1:+31951736 | None:intergenic |
| GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 8.1:+31950213 | None:intergenic |
| CTTGCTTACTAAGCCCCTCC+TGG | 0.460120 | 8.1:+31950159 | None:intergenic |
| AGATGAACCTACAAATCATC+TGG | 0.461197 | 8.1:-31949997 | MS.gene44209:CDS |
| AATATAGCTTCTGGTGAAGA+AGG | 0.461252 | 8.1:-31951157 | MS.gene44209:CDS |
| TGATGTCCTTCTGGTTGAGC+AGG | 0.464580 | 8.1:-31951272 | MS.gene44209:CDS |
| GTTGATGTTGGCATTGATAT+GGG | 0.466393 | 8.1:-31950380 | MS.gene44209:CDS |
| AAATTTCCCGGGAACATTTG+AGG | 0.468288 | 8.1:-31949826 | MS.gene44209:CDS |
| TTGATTGGGCCGAATGGAAT+GGG | 0.471197 | 8.1:-31951352 | MS.gene44209:CDS |
| GTGCAAAACTTGGTAAATAT+GGG | 0.472556 | 8.1:-31950127 | MS.gene44209:CDS |
| GTTGACTTGCCCATTCCATT+CGG | 0.473068 | 8.1:+31951343 | None:intergenic |
| CAAAATCCTTTAGTGGCGGC+TGG | 0.473137 | 8.1:-31950976 | MS.gene44209:CDS |
| CTGGTTGAGCAGGAGGTAGT+TGG | 0.476330 | 8.1:-31951262 | MS.gene44209:CDS |
| CATCCTCCAGCCGCCACTAA+AGG | 0.476753 | 8.1:+31950970 | None:intergenic |
| TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 8.1:+31950229 | None:intergenic |
| AGGCTCTCAGATGTTGATGT+TGG | 0.477753 | 8.1:-31950392 | MS.gene44209:CDS |
| TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 8.1:-31950067 | MS.gene44209:CDS |
| CAAATATGGGTTGTTGAAGA+TGG | 0.482826 | 8.1:-31949858 | MS.gene44209:CDS |
| TCACTGTTGTAATTGGAAGT+CGG | 0.487149 | 8.1:-31951513 | MS.gene44209:CDS |
| CCCTCCTGATAGTTTGACAA+TGG | 0.490991 | 8.1:+31950079 | None:intergenic |
| ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 8.1:-31950066 | MS.gene44209:CDS |
| GGACTCGTGTTGCCATCGTT+GGG | 0.492382 | 8.1:-31950358 | MS.gene44209:CDS |
| TGATGCATTGGCTGATGCGC+TGG | 0.493126 | 8.1:-31949961 | MS.gene44209:CDS |
| AGTCGGGCTTCAGTGCTTGA+TGG | 0.496702 | 8.1:-31951496 | MS.gene44209:CDS |
| CCTCAAGTCAAGATGATTAG+TGG | 0.497140 | 8.1:+31950889 | None:intergenic |
| AGATGATACTAATGAGGAAG+AGG | 0.497593 | 8.1:-31951125 | MS.gene44209:CDS |
| TATGAACTATTACAACTGAT+GGG | 0.498109 | 8.1:-31951076 | MS.gene44209:CDS |
| TGTGGCTGAACAGGCAAAGA+AGG | 0.499430 | 8.1:-31951563 | MS.gene44209:CDS |
| ATCGTTGGGCCTAATGGTGC+TGG | 0.501366 | 8.1:-31950344 | MS.gene44209:CDS |
| CGTCCTACAAAATCCTTTAG+TGG | 0.502520 | 8.1:-31950983 | MS.gene44209:CDS |
| TTGAAACTTCATTTCTATCG+TGG | 0.502609 | 8.1:-31950752 | MS.gene44209:CDS |
| TTCGAAGAAGTCAGAAGTTG+AGG | 0.502896 | 8.1:-31950265 | MS.gene44209:CDS |
| TAGCAAAGATGTTTCTAAGA+AGG | 0.504069 | 8.1:-31951848 | MS.gene44209:CDS |
| CAAAAGCAAGAGCAAGGGTA+AGG | 0.506561 | 8.1:-31950561 | MS.gene44209:CDS |
| GAGGCTGTTCGTGCAAAACT+TGG | 0.509140 | 8.1:-31950137 | MS.gene44209:CDS |
| AGAAGTCAGAAGTTGAGGAT+AGG | 0.509662 | 8.1:-31950260 | MS.gene44209:CDS |
| TACTAATGAGGAAGAGGATG+CGG | 0.509848 | 8.1:-31951119 | MS.gene44209:CDS |
| CTTTGCCTGTTCAGCCACAT+GGG | 0.510208 | 8.1:+31951567 | None:intergenic |
| TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 8.1:+31950228 | None:intergenic |
| TTTGATTGGGCCGAATGGAA+TGG | 0.517459 | 8.1:-31951353 | MS.gene44209:CDS |
| TCTTGCTTGGAGGAAGATAC+CGG | 0.518263 | 8.1:-31951308 | MS.gene44209:CDS |
| GTTCAGTGGGTTCAGGAAAG+TGG | 0.522874 | 8.1:+31950477 | None:intergenic |
| GATGCGCTGGATGAATTCAC+TGG | 0.525230 | 8.1:-31949948 | MS.gene44209:CDS |
| TGTCCTTCTGGTTGAGCAGG+AGG | 0.526914 | 8.1:-31951269 | MS.gene44209:CDS |
| TAAGCCCCTCCTGGTCTGGA+TGG | 0.527473 | 8.1:+31950168 | None:intergenic |
| AGCTAAGTTCGCAGCAGCTA+AGG | 0.533009 | 8.1:-31950594 | MS.gene44209:CDS |
| AGACGAAGAAGGTACTGAAC+AGG | 0.533085 | 8.1:+31950191 | None:intergenic |
| TTAGAAACATCTTTGCTACC+TGG | 0.537424 | 8.1:+31951853 | None:intergenic |
| AGCTTCTGGTGAAGAAGGCA+TGG | 0.539788 | 8.1:-31951152 | MS.gene44209:CDS |
| GTATGAACTATTACAACTGA+TGG | 0.541758 | 8.1:-31951077 | MS.gene44209:CDS |
| TATGCAAAGTATTGATGCAT+TGG | 0.543005 | 8.1:-31949973 | MS.gene44209:CDS |
| ACTAATGAGGAAGAGGATGC+GGG | 0.545085 | 8.1:-31951118 | MS.gene44209:CDS |
| AGTGGAGGTGTGAGTTCAGT+GGG | 0.547635 | 8.1:+31950464 | None:intergenic |
| GAACAAGGCTCAACAAGATA+AGG | 0.549422 | 8.1:-31950627 | MS.gene44209:CDS |
| AGCTAGAAGAACCGGGAACA+AGG | 0.549535 | 8.1:-31950642 | MS.gene44209:CDS |
| TAGCTGCTGCGAACTTAGCT+CGG | 0.550469 | 8.1:+31950597 | None:intergenic |
| TGAAGAACGGAGTCAAATAT+GGG | 0.551908 | 8.1:-31949871 | MS.gene44209:CDS |
| ACTTCAGTGAAGATATCTCA+TGG | 0.554865 | 8.1:-31951388 | MS.gene44209:CDS |
| GGGAACATTTGAGGATTACA+AGG | 0.556810 | 8.1:-31949817 | MS.gene44209:CDS |
| CGTCTCCATCCAGACCAGGA+GGG | 0.561023 | 8.1:-31950173 | MS.gene44209:CDS |
| TGAGTCTGAAGAGGAGCAAG+AGG | 0.562122 | 8.1:-31951677 | MS.gene44209:CDS |
| TATGGTTTGATTGGGCCGAA+TGG | 0.562765 | 8.1:-31951358 | MS.gene44209:CDS |
| GTCTCCATCCAGACCAGGAG+GGG | 0.564083 | 8.1:-31950172 | MS.gene44209:CDS |
| AATGAAGTTTCAAATCATGC+AGG | 0.564833 | 8.1:+31950762 | None:intergenic |
| ACATCAATATTCTTAGGTAC+CGG | 0.565113 | 8.1:+31951289 | None:intergenic |
| TTCATCCATACCTGCCAACA+TGG | 0.566109 | 8.1:+31951807 | None:intergenic |
| CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 8.1:-31950222 | MS.gene44209:CDS |
| TAGAAGAGTACTTGTGTCGT+TGG | 0.567745 | 8.1:-31950853 | MS.gene44209:CDS |
| TCTTCGTCTCCATCCAGACC+AGG | 0.570272 | 8.1:-31950177 | MS.gene44209:CDS |
| ACTTCAATAAGCTGCAGAAG+TGG | 0.570862 | 8.1:+31950446 | None:intergenic |
| CCACTAATCATCTTGACTTG+AGG | 0.575501 | 8.1:-31950889 | MS.gene44209:CDS |
| TTGACTTGAGGGCTGTTCTG+TGG | 0.576261 | 8.1:-31950877 | MS.gene44209:CDS |
| GGGGTAAGATGGTTATGACT+AGG | 0.577561 | 8.1:+31950101 | None:intergenic |
| GGCACTGTTAGAAATTTCCC+GGG | 0.580457 | 8.1:-31949837 | MS.gene44209:CDS |
| TGTAATCCTCAAATGTTCCC+GGG | 0.587763 | 8.1:+31949820 | None:intergenic |
| GAAAAGCAAAAGCAAGAGCA+AGG | 0.587820 | 8.1:-31950567 | MS.gene44209:CDS |
| ACACTGCTGAATCTTCTAGC+TGG | 0.589769 | 8.1:-31950314 | MS.gene44209:CDS |
| GGATGCAGGTCCATCTTCAA+AGG | 0.590519 | 8.1:-31951881 | MS.gene44209:CDS |
| TTCAGACTCATCATCATCAG+AGG | 0.591473 | 8.1:+31951690 | None:intergenic |
| TGATGATGATGAGTCTGAAG+AGG | 0.592511 | 8.1:-31951686 | MS.gene44209:CDS |
| TAGAGGTACCACACAAGTGG+AGG | 0.593380 | 8.1:-31950517 | MS.gene44209:CDS |
| AAGTGGAGGTGTGAGTTCAG+TGG | 0.595199 | 8.1:+31950463 | None:intergenic |
| GCCAGATTTGAAGCCACTTG+AGG | 0.595553 | 8.1:-31951644 | MS.gene44209:CDS |
| CTTGTGTGGTACCTCTACTT+GGG | 0.597963 | 8.1:+31950523 | None:intergenic |
| CCATCTTCAAAGGCTAAACC+AGG | 0.598127 | 8.1:-31951871 | MS.gene44209:CDS |
| CTCAAGTCAAGATGATTAGT+GGG | 0.599587 | 8.1:+31950890 | None:intergenic |
| GGATAAAGATGATACTAATG+AGG | 0.600793 | 8.1:-31951131 | MS.gene44209:CDS |
| CTGAGAGCCTAAAATCCTCT+CGG | 0.603865 | 8.1:+31950405 | None:intergenic |
| TTGATGTTGGCATTGATATG+GGG | 0.604870 | 8.1:-31950379 | MS.gene44209:CDS |
| GTGTCGTTGGAAGAAAACTT+TGG | 0.605012 | 8.1:-31950840 | MS.gene44209:CDS |
| CTGTAGTCCCTCCACTTGTG+TGG | 0.605482 | 8.1:+31950509 | None:intergenic |
| AAGTAGAGGTACCACACAAG+TGG | 0.606298 | 8.1:-31950520 | MS.gene44209:CDS |
| TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 8.1:+31950914 | None:intergenic |
| TCGTTGGAAGAAAACTTTGG+TGG | 0.608839 | 8.1:-31950837 | MS.gene44209:CDS |
| TCAATAAGCTGCAGAAGTGG+AGG | 0.610264 | 8.1:+31950449 | None:intergenic |
| GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 8.1:-31950293 | MS.gene44209:CDS |
| GAGCAAGGGTAAGGTTGATG+AGG | 0.613167 | 8.1:-31950552 | MS.gene44209:CDS |
| AGGAGCAAGAGGAAAAGCAT+AGG | 0.613429 | 8.1:-31951666 | MS.gene44209:CDS |
| TCAGACTCATCATCATCAGA+GGG | 0.613503 | 8.1:+31951691 | None:intergenic |
| TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 8.1:+31950913 | None:intergenic |
| GGAGGGGCTTAGTAAGCAAG+AGG | 0.616783 | 8.1:-31950156 | MS.gene44209:CDS |
| CCCATTGTCAAACTATCAGG+AGG | 0.619312 | 8.1:-31950080 | MS.gene44209:CDS |
| TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 8.1:+31951631 | None:intergenic |
| CTCCTGATAGTTTGACAATG+GGG | 0.626825 | 8.1:+31950081 | None:intergenic |
| CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 8.1:+31951266 | None:intergenic |
| AATCCTTTAGTGGCGGCTGG+AGG | 0.632477 | 8.1:-31950973 | MS.gene44209:CDS |
| TGAAAGCAGCTAGAAGAACC+GGG | 0.637063 | 8.1:-31950649 | MS.gene44209:CDS |
| GGTCTGGATGGAGACGAAGA+AGG | 0.643717 | 8.1:+31950180 | None:intergenic |
| GGCTCAACAAGATAAGGTGA+AGG | 0.644665 | 8.1:-31950621 | MS.gene44209:CDS |
| TCGTCTCCATCCAGACCAGG+AGG | 0.645629 | 8.1:-31950174 | MS.gene44209:CDS |
| TAAAATGTGAGGTCTTGACA+TGG | 0.645742 | 8.1:+31950025 | None:intergenic |
| TCATCTAACAATAAAATGTG+AGG | 0.647891 | 8.1:+31950014 | None:intergenic |
| TCCTGATAGTTTGACAATGG+GGG | 0.650226 | 8.1:+31950082 | None:intergenic |
| TGAGGATGAGACCCAAGTAG+AGG | 0.652669 | 8.1:-31950534 | MS.gene44209:CDS |
| AGAGGTACCACACAAGTGGA+GGG | 0.653345 | 8.1:-31950516 | MS.gene44209:CDS |
| GACTCATCATCATCAGAGGG+AGG | 0.655723 | 8.1:+31951694 | None:intergenic |
| AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 8.1:-31950063 | MS.gene44209:CDS |
| CCTACAAAATCCTTTAGTGG+CGG | 0.660892 | 8.1:-31950980 | MS.gene44209:CDS |
| AAAAGCAAAAGCAAGAGCAA+GGG | 0.661346 | 8.1:-31950566 | MS.gene44209:CDS |
| ATGAACTATTACAACTGATG+GGG | 0.661536 | 8.1:-31951075 | MS.gene44209:CDS |
| AGCACCATTAGGCCCAACGA+TGG | 0.661552 | 8.1:+31950346 | None:intergenic |
| AGTGTATGCAGAAGCTTTCG+GGG | 0.663149 | 8.1:+31951732 | None:intergenic |
| GCGCTGGATGAATTCACTGG+TGG | 0.669802 | 8.1:-31949945 | MS.gene44209:CDS |
| CCATTGTCAAACTATCAGGA+GGG | 0.684004 | 8.1:-31950079 | MS.gene44209:CDS |
| GTGTCTGTGATGATGAAGAA+CGG | 0.698431 | 8.1:-31949884 | MS.gene44209:CDS |
| CAAGTGGAGGGACTACAGCG+TGG | 0.701926 | 8.1:-31950504 | MS.gene44209:CDS |
| TCAGTGCTTGATGGAGACGA+TGG | 0.702484 | 8.1:-31951487 | MS.gene44209:CDS |
| CTTCAGTTACCCAAACCGAG+AGG | 0.710739 | 8.1:-31950420 | MS.gene44209:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATGAACTATTACAACTGAT+GGG | - | chr8.1:31950601-31950620 | MS.gene44209:CDS | 25.0% |
| ! | TCATCTAACAATAAAATGTG+AGG | + | chr8.1:31951666-31951685 | None:intergenic | 25.0% |
| !! | AACGATAGAAAATTTTTCTG+TGG | - | chr8.1:31950237-31950256 | MS.gene44209:CDS | 25.0% |
| AAAAGCTGATAAGCCTAAAA+AGG | - | chr8.1:31949892-31949911 | MS.gene44209:CDS | 30.0% | |
| AATGAAGTTTCAAATCATGC+AGG | + | chr8.1:31950918-31950937 | None:intergenic | 30.0% | |
| ACATCAATATTCTTAGGTAC+CGG | + | chr8.1:31950391-31950410 | None:intergenic | 30.0% | |
| AGAAGGACATCAATATTCTT+AGG | + | chr8.1:31950397-31950416 | None:intergenic | 30.0% | |
| ATATCTCATGGAAAACGTTA+TGG | - | chr8.1:31950301-31950320 | MS.gene44209:CDS | 30.0% | |
| ATGAACTATTACAACTGATG+GGG | - | chr8.1:31950602-31950621 | MS.gene44209:CDS | 30.0% | |
| GAAAACGTTATGGTTTGATT+GGG | - | chr8.1:31950311-31950330 | MS.gene44209:CDS | 30.0% | |
| GATCTACAAAATATAGCTTC+TGG | - | chr8.1:31950511-31950530 | MS.gene44209:CDS | 30.0% | |
| GGATAAAGATGATACTAATG+AGG | - | chr8.1:31950546-31950565 | MS.gene44209:CDS | 30.0% | |
| GTATGAACTATTACAACTGA+TGG | - | chr8.1:31950600-31950619 | MS.gene44209:CDS | 30.0% | |
| GTGCAAAACTTGGTAAATAT+GGG | - | chr8.1:31951550-31951569 | MS.gene44209:CDS | 30.0% | |
| TAAGAATATTGATGTCCTTC+TGG | - | chr8.1:31950396-31950415 | MS.gene44209:CDS | 30.0% | |
| TTGAAACTTCATTTCTATCG+TGG | - | chr8.1:31950925-31950944 | MS.gene44209:CDS | 30.0% | |
| ! | TAGCAAAGATGTTTCTAAGA+AGG | - | chr8.1:31949829-31949848 | MS.gene44209:CDS | 30.0% |
| ! | TTATTCGAAGATGCCTTTTT+AGG | + | chr8.1:31949908-31949927 | None:intergenic | 30.0% |
| !! | AATTTTGATGCTTTTGAGAG+TGG | - | chr8.1:31950949-31950968 | MS.gene44209:CDS | 30.0% |
| !! | ATTTTGATGCTTTTGAGAGT+GGG | - | chr8.1:31950950-31950969 | MS.gene44209:CDS | 30.0% |
| !! | TAAAAAGGCATCTTCGAATA+AGG | - | chr8.1:31949907-31949926 | MS.gene44209:CDS | 30.0% |
| !! | TATGCAAAGTATTGATGCAT+TGG | - | chr8.1:31951704-31951723 | MS.gene44209:CDS | 30.0% |
| AAAAGCAAAAGCAAGAGCAA+GGG | - | chr8.1:31951111-31951130 | MS.gene44209:CDS | 35.0% | |
| AATATAGCTTCTGGTGAAGA+AGG | - | chr8.1:31950520-31950539 | MS.gene44209:CDS | 35.0% | |
| ACTTCAGTGAAGATATCTCA+TGG | - | chr8.1:31950289-31950308 | MS.gene44209:CDS | 35.0% | |
| AGATGAACCTACAAATCATC+TGG | - | chr8.1:31951680-31951699 | MS.gene44209:CDS | 35.0% | |
| AGATGATACTAATGAGGAAG+AGG | - | chr8.1:31950552-31950571 | MS.gene44209:CDS | 35.0% | |
| ATGAAGAACGGAGTCAAATA+TGG | - | chr8.1:31951805-31951824 | MS.gene44209:CDS | 35.0% | |
| CGTGCAAAACTTGGTAAATA+TGG | - | chr8.1:31951549-31951568 | MS.gene44209:CDS | 35.0% | |
| CTCAAGTCAAGATGATTAGT+GGG | + | chr8.1:31950790-31950809 | None:intergenic | 35.0% | |
| GATGCTTTCACTGTTGTAAT+TGG | - | chr8.1:31950157-31950176 | MS.gene44209:CDS | 35.0% | |
| GGAAAACGTTATGGTTTGAT+TGG | - | chr8.1:31950310-31950329 | MS.gene44209:CDS | 35.0% | |
| GTGTTTCATCCATTGTTAGT+AGG | + | chr8.1:31951467-31951486 | None:intergenic | 35.0% | |
| TAAAATGTGAGGTCTTGACA+TGG | + | chr8.1:31951655-31951674 | None:intergenic | 35.0% | |
| TCACTGTTGTAATTGGAAGT+CGG | - | chr8.1:31950164-31950183 | MS.gene44209:CDS | 35.0% | |
| TCATCGAGCAATAATAGAGT+GGG | + | chr8.1:31950766-31950785 | None:intergenic | 35.0% | |
| TGAAGAACGGAGTCAAATAT+GGG | - | chr8.1:31951806-31951825 | MS.gene44209:CDS | 35.0% | |
| TTAGAAACATCTTTGCTACC+TGG | + | chr8.1:31949827-31949846 | None:intergenic | 35.0% | |
| TTCATCGAGCAATAATAGAG+TGG | + | chr8.1:31950767-31950786 | None:intergenic | 35.0% | |
| TTGTAATCCTCAAATGTTCC+CGG | + | chr8.1:31951861-31951880 | None:intergenic | 35.0% | |
| ! | AAAATTTTTCTGTGGCTGCT+CGG | - | chr8.1:31950245-31950264 | MS.gene44209:CDS | 35.0% |
| ! | CAAATATGGGTTGTTGAAGA+TGG | - | chr8.1:31951819-31951838 | MS.gene44209:CDS | 35.0% |
| ! | CACTAAAGGATTTTGTAGGA+CGG | + | chr8.1:31950696-31950715 | None:intergenic | 35.0% |
| ! | CACTAATCATCTTGACTTGA+GGG | - | chr8.1:31950789-31950808 | MS.gene44209:CDS | 35.0% |
| ! | TGCATATCCAGATGATTTGT+AGG | + | chr8.1:31951690-31951709 | None:intergenic | 35.0% |
| !! | GTTGATGTTGGCATTGATAT+GGG | - | chr8.1:31951297-31951316 | MS.gene44209:CDS | 35.0% |
| !! | TGTTGATGTTGGCATTGATA+TGG | - | chr8.1:31951296-31951315 | MS.gene44209:CDS | 35.0% |
| !! | TTGATGTTGGCATTGATATG+GGG | - | chr8.1:31951298-31951317 | MS.gene44209:CDS | 35.0% |
| !!! | TCAAAGATTTTAGCTGGTCT+GGG | - | chr8.1:31950649-31950668 | MS.gene44209:CDS | 35.0% |
| AAATTTCCCGGGAACATTTG+AGG | - | chr8.1:31951851-31951870 | MS.gene44209:CDS | 40.0% | |
| AAGAAAAAGTCAGAGGATGC+AGG | - | chr8.1:31949782-31949801 | MS.gene44209:CDS | 40.0% | |
| ACTTCAATAAGCTGCAGAAG+TGG | + | chr8.1:31951234-31951253 | None:intergenic | 40.0% | |
| AGAAGTCAGAAGTTGAGGAT+AGG | - | chr8.1:31951417-31951436 | MS.gene44209:CDS | 40.0% | |
| CACTGTTGTAATTGGAAGTC+GGG | - | chr8.1:31950165-31950184 | MS.gene44209:CDS | 40.0% | |
| CCATTGTCAAACTATCAGGA+GGG | - | chr8.1:31951598-31951617 | MS.gene44209:CDS | 40.0% | |
| CCTACAAAATCCTTTAGTGG+CGG | - | chr8.1:31950697-31950716 | MS.gene44209:CDS | 40.0% | |
| CCTCAAGTCAAGATGATTAG+TGG | + | chr8.1:31950791-31950810 | None:intergenic | 40.0% | |
| CCTCCTGATAGTTTGACAAT+GGG | + | chr8.1:31951600-31951619 | None:intergenic | 40.0% | |
| CGTCCTACAAAATCCTTTAG+TGG | - | chr8.1:31950694-31950713 | MS.gene44209:CDS | 40.0% | |
| CTCCTGATAGTTTGACAATG+GGG | + | chr8.1:31951599-31951618 | None:intergenic | 40.0% | |
| CTTTGTGGACCTACTAACAA+TGG | - | chr8.1:31951455-31951474 | MS.gene44209:CDS | 40.0% | |
| GAAAAGCAAAAGCAAGAGCA+AGG | - | chr8.1:31951110-31951129 | MS.gene44209:CDS | 40.0% | |
| GAACAAGGCTCAACAAGATA+AGG | - | chr8.1:31951050-31951069 | MS.gene44209:CDS | 40.0% | |
| GAAGTCAGAAGTTGAGGATA+GGG | - | chr8.1:31951418-31951437 | MS.gene44209:CDS | 40.0% | |
| GAGATATTCCCAACACTTTG+TGG | - | chr8.1:31951440-31951459 | MS.gene44209:CDS | 40.0% | |
| GGGAACATTTGAGGATTACA+AGG | - | chr8.1:31951860-31951879 | MS.gene44209:CDS | 40.0% | |
| TACTAATGAGGAAGAGGATG+CGG | - | chr8.1:31950558-31950577 | MS.gene44209:CDS | 40.0% | |
| TCAGACTCATCATCATCAGA+GGG | + | chr8.1:31949989-31950008 | None:intergenic | 40.0% | |
| TCAGTGTATGCAGAAGCTTT+CGG | + | chr8.1:31949950-31949969 | None:intergenic | 40.0% | |
| TCCTGATAGTTTGACAATGG+GGG | + | chr8.1:31951598-31951617 | None:intergenic | 40.0% | |
| TCGTTGGAAGAAAACTTTGG+TGG | - | chr8.1:31950840-31950859 | MS.gene44209:CDS | 40.0% | |
| TGGCACTGTTAGAAATTTCC+CGG | - | chr8.1:31951839-31951858 | MS.gene44209:CDS | 40.0% | |
| TGTAATCCTCAAATGTTCCC+GGG | + | chr8.1:31951860-31951879 | None:intergenic | 40.0% | |
| TTAGTAGGTCCACAAAGTGT+TGG | + | chr8.1:31951452-31951471 | None:intergenic | 40.0% | |
| TTCAGACTCATCATCATCAG+AGG | + | chr8.1:31949990-31950009 | None:intergenic | 40.0% | |
| TTCGAAGAAGTCAGAAGTTG+AGG | - | chr8.1:31951412-31951431 | MS.gene44209:CDS | 40.0% | |
| TTGAAAGCAGCTAGAAGAAC+CGG | - | chr8.1:31951027-31951046 | MS.gene44209:CDS | 40.0% | |
| ! | AAATTTTTCTGTGGCTGCTC+GGG | - | chr8.1:31950246-31950265 | MS.gene44209:CDS | 40.0% |
| ! | CCACTAATCATCTTGACTTG+AGG | - | chr8.1:31950788-31950807 | MS.gene44209:CDS | 40.0% |
| ! | GAATCTTCTAGCTGGTGATT+TGG | - | chr8.1:31951371-31951390 | MS.gene44209:CDS | 40.0% |
| ! | GGTTTTACAAAGGACATGCA+GGG | - | chr8.1:31950670-31950689 | MS.gene44209:CDS | 40.0% |
| ! | GTAGATTTTCCAGCACCATT+AGG | + | chr8.1:31951345-31951364 | None:intergenic | 40.0% |
| ! | GTGTCGTTGGAAGAAAACTT+TGG | - | chr8.1:31950837-31950856 | MS.gene44209:CDS | 40.0% |
| ! | GTGTCTGTGATGATGAAGAA+CGG | - | chr8.1:31951793-31951812 | MS.gene44209:CDS | 40.0% |
| ! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr8.1:31951451-31951470 | None:intergenic | 40.0% |
| ! | TGATGATGATGAGTCTGAAG+AGG | - | chr8.1:31949991-31950010 | MS.gene44209:CDS | 40.0% |
| !! | CAAGCGTCAAAGATTTTAGC+TGG | - | chr8.1:31950643-31950662 | MS.gene44209:CDS | 40.0% |
| !! | TAGAAGAGTACTTGTGTCGT+TGG | - | chr8.1:31950824-31950843 | MS.gene44209:CDS | 40.0% |
| !!! | AGATATTTTAGCTGCCCATG+TGG | - | chr8.1:31950096-31950115 | MS.gene44209:CDS | 40.0% |
| !!! | CACTTTTGAAGCTTCTTGCT+TGG | - | chr8.1:31950356-31950375 | MS.gene44209:CDS | 40.0% |
| !!! | GTCAAAGATTTTAGCTGGTC+TGG | - | chr8.1:31950648-31950667 | MS.gene44209:CDS | 40.0% |
| !!! | TTTTGAAGCTTCTTGCTTGG+AGG | - | chr8.1:31950359-31950378 | MS.gene44209:CDS | 40.0% |
| ACACTGCTGAATCTTCTAGC+TGG | - | chr8.1:31951363-31951382 | MS.gene44209:CDS | 45.0% | |
| ACCCCCATTGTCAAACTATC+AGG | - | chr8.1:31951594-31951613 | MS.gene44209:CDS | 45.0% | |
| ACCTCAAGTGGCTTCAAATC+TGG | + | chr8.1:31950037-31950056 | None:intergenic | 45.0% | |
| ACTAATGAGGAAGAGGATGC+GGG | - | chr8.1:31950559-31950578 | MS.gene44209:CDS | 45.0% | |
| ACTTGTGTGGTACCTCTACT+TGG | + | chr8.1:31951158-31951177 | None:intergenic | 45.0% | |
| AGCCTAAAATCCTCTCGGTT+TGG | + | chr8.1:31951270-31951289 | None:intergenic | 45.0% | |
| AGGCAAAGAAGGAAGCTCTT+AGG | - | chr8.1:31950125-31950144 | MS.gene44209:CDS | 45.0% | |
| AGGCTCTCAGATGTTGATGT+TGG | - | chr8.1:31951285-31951304 | MS.gene44209:CDS | 45.0% | |
| AGTGTATGCAGAAGCTTTCG+GGG | + | chr8.1:31949948-31949967 | None:intergenic | 45.0% | |
| CAAAAGCAAGAGCAAGGGTA+AGG | - | chr8.1:31951116-31951135 | MS.gene44209:CDS | 45.0% | |
| CAGTGTATGCAGAAGCTTTC+GGG | + | chr8.1:31949949-31949968 | None:intergenic | 45.0% | |
| CCATCTTCAAAGGCTAAACC+AGG | - | chr8.1:31949806-31949825 | MS.gene44209:CDS | 45.0% | |
| CCCATTGTCAAACTATCAGG+AGG | - | chr8.1:31951597-31951616 | MS.gene44209:CDS | 45.0% | |
| CCCTCCTGATAGTTTGACAA+TGG | + | chr8.1:31951601-31951620 | None:intergenic | 45.0% | |
| CTGAGAGCCTAAAATCCTCT+CGG | + | chr8.1:31951275-31951294 | None:intergenic | 45.0% | |
| CTTCGAACTTCACCTTCACT+TGG | + | chr8.1:31951399-31951418 | None:intergenic | 45.0% | |
| CTTGTGTGGTACCTCTACTT+GGG | + | chr8.1:31951157-31951176 | None:intergenic | 45.0% | |
| GCCTAAAATCCTCTCGGTTT+GGG | + | chr8.1:31951269-31951288 | None:intergenic | 45.0% | |
| GGCAAAGAAGGAAGCTCTTA+GGG | - | chr8.1:31950126-31950145 | MS.gene44209:CDS | 45.0% | |
| GGCACTGTTAGAAATTTCCC+GGG | - | chr8.1:31951840-31951859 | MS.gene44209:CDS | 45.0% | |
| GGCTCAACAAGATAAGGTGA+AGG | - | chr8.1:31951056-31951075 | MS.gene44209:CDS | 45.0% | |
| GGGGTAAGATGGTTATGACT+AGG | + | chr8.1:31951579-31951598 | None:intergenic | 45.0% | |
| GTTTGACAATGGGGGTAAGA+TGG | + | chr8.1:31951590-31951609 | None:intergenic | 45.0% | |
| TATGGTTTGATTGGGCCGAA+TGG | - | chr8.1:31950319-31950338 | MS.gene44209:CDS | 45.0% | |
| TCAATAAGCTGCAGAAGTGG+AGG | + | chr8.1:31951231-31951250 | None:intergenic | 45.0% | |
| TCAGCAATAGACACCTCAAG+TGG | + | chr8.1:31950049-31950068 | None:intergenic | 45.0% | |
| TCTTGCTTGGAGGAAGATAC+CGG | - | chr8.1:31950369-31950388 | MS.gene44209:CDS | 45.0% | |
| TGAAAGCAGCTAGAAGAACC+GGG | - | chr8.1:31951028-31951047 | MS.gene44209:CDS | 45.0% | |
| TTCATCCATACCTGCCAACA+TGG | + | chr8.1:31949873-31949892 | None:intergenic | 45.0% | |
| TTGATTGGGCCGAATGGAAT+GGG | - | chr8.1:31950325-31950344 | MS.gene44209:CDS | 45.0% | |
| TTTGATTGGGCCGAATGGAA+TGG | - | chr8.1:31950324-31950343 | MS.gene44209:CDS | 45.0% | |
| ! | AATTTTTCTGTGGCTGCTCG+GGG | - | chr8.1:31950247-31950266 | MS.gene44209:CDS | 45.0% |
| ! | ACCCAAACCGAGAGGATTTT+AGG | - | chr8.1:31951265-31951284 | MS.gene44209:CDS | 45.0% |
| ! | AGGAGCAAGAGGAAAAGCAT+AGG | - | chr8.1:31950011-31950030 | MS.gene44209:CDS | 45.0% |
| ! | CCGCCACTAAAGGATTTTGT+AGG | + | chr8.1:31950700-31950719 | None:intergenic | 45.0% |
| ! | CCTGGTTTAGCCTTTGAAGA+TGG | + | chr8.1:31949809-31949828 | None:intergenic | 45.0% |
| ! | GGGTTTTACAAAGGACATGC+AGG | - | chr8.1:31950669-31950688 | MS.gene44209:CDS | 45.0% |
| ! | GTTTTCTGTCTCTGCCATGT+TGG | - | chr8.1:31949856-31949875 | MS.gene44209:CDS | 45.0% |
| !! | AAGTAGAGGTACCACACAAG+TGG | - | chr8.1:31951157-31951176 | MS.gene44209:CDS | 45.0% |
| !! | AGACGAAGAAGGTACTGAAC+AGG | + | chr8.1:31951489-31951508 | None:intergenic | 45.0% |
| !! | AGCTGGTCTGGGTTTTACAA+AGG | - | chr8.1:31950660-31950679 | MS.gene44209:CDS | 45.0% |
| !! | ATCTTGTTGAGCCTTGTTCC+CGG | + | chr8.1:31951049-31951068 | None:intergenic | 45.0% |
| !! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr8.1:31951384-31951403 | MS.gene44209:CDS | 45.0% |
| !! | GTTGACTTGCCCATTCCATT+CGG | + | chr8.1:31950337-31950356 | None:intergenic | 45.0% |
| AGCTAAGTTCGCAGCAGCTA+AGG | - | chr8.1:31951083-31951102 | MS.gene44209:CDS | 50.0% | |
| AGCTAGAAGAACCGGGAACA+AGG | - | chr8.1:31951035-31951054 | MS.gene44209:CDS | 50.0% | |
| AGCTTCTGGTGAAGAAGGCA+TGG | - | chr8.1:31950525-31950544 | MS.gene44209:CDS | 50.0% | |
| CAAAATCCTTTAGTGGCGGC+TGG | - | chr8.1:31950701-31950720 | MS.gene44209:CDS | 50.0% | |
| CTTCAGTTACCCAAACCGAG+AGG | - | chr8.1:31951257-31951276 | MS.gene44209:CDS | 50.0% | |
| CTTTGCCTGTTCAGCCACAT+GGG | + | chr8.1:31950113-31950132 | None:intergenic | 50.0% | |
| GACTCATCATCATCAGAGGG+AGG | + | chr8.1:31949986-31950005 | None:intergenic | 50.0% | |
| GAGGCTGTTCGTGCAAAACT+TGG | - | chr8.1:31951540-31951559 | MS.gene44209:CDS | 50.0% | |
| GATGCGCTGGATGAATTCAC+TGG | - | chr8.1:31951729-31951748 | MS.gene44209:CDS | 50.0% | |
| GGATGCAGGTCCATCTTCAA+AGG | - | chr8.1:31949796-31949815 | MS.gene44209:CDS | 50.0% | |
| TAGCTGCTGCGAACTTAGCT+CGG | + | chr8.1:31951083-31951102 | None:intergenic | 50.0% | |
| TATCAGGAGGGCAGAAAGCT+CGG | - | chr8.1:31951610-31951629 | MS.gene44209:CDS | 50.0% | |
| TCAGTGCTTGATGGAGACGA+TGG | - | chr8.1:31950190-31950209 | MS.gene44209:CDS | 50.0% | |
| TCTTTGCCTGTTCAGCCACA+TGG | + | chr8.1:31950114-31950133 | None:intergenic | 50.0% | |
| TGAGGATGAGACCCAAGTAG+AGG | - | chr8.1:31951143-31951162 | MS.gene44209:CDS | 50.0% | |
| TGAGTCTGAAGAGGAGCAAG+AGG | - | chr8.1:31950000-31950019 | MS.gene44209:CDS | 50.0% | |
| TGTGGCTGAACAGGCAAAGA+AGG | - | chr8.1:31950114-31950133 | MS.gene44209:CDS | 50.0% | |
| ! | AAGTGGAGGTGTGAGTTCAG+TGG | + | chr8.1:31951217-31951236 | None:intergenic | 50.0% |
| ! | AGTGGAGGTGTGAGTTCAGT+GGG | + | chr8.1:31951216-31951235 | None:intergenic | 50.0% |
| ! | GCCAGATTTGAAGCCACTTG+AGG | - | chr8.1:31950033-31950052 | MS.gene44209:CDS | 50.0% |
| ! | GTTCAGTGGGTTCAGGAAAG+TGG | + | chr8.1:31951203-31951222 | None:intergenic | 50.0% |
| ! | TGATGTCCTTCTGGTTGAGC+AGG | - | chr8.1:31950405-31950424 | MS.gene44209:CDS | 50.0% |
| ! | TTGACTTGAGGGCTGTTCTG+TGG | - | chr8.1:31950800-31950819 | MS.gene44209:CDS | 50.0% |
| !! | AGAGGTACCACACAAGTGGA+GGG | - | chr8.1:31951161-31951180 | MS.gene44209:CDS | 50.0% |
| !! | GAGCAAGGGTAAGGTTGATG+AGG | - | chr8.1:31951125-31951144 | MS.gene44209:CDS | 50.0% |
| !! | TAGAGGTACCACACAAGTGG+AGG | - | chr8.1:31951160-31951179 | MS.gene44209:CDS | 50.0% |
| AATCCTTTAGTGGCGGCTGG+AGG | - | chr8.1:31950704-31950723 | MS.gene44209:CDS | 55.0% | |
| AGCACCATTAGGCCCAACGA+TGG | + | chr8.1:31951334-31951353 | None:intergenic | 55.0% | |
| AGTCGGGCTTCAGTGCTTGA+TGG | - | chr8.1:31950181-31950200 | MS.gene44209:CDS | 55.0% | |
| ATCAGGAGGGCAGAAAGCTC+GGG | - | chr8.1:31951611-31951630 | MS.gene44209:CDS | 55.0% | |
| ATCGTTGGGCCTAATGGTGC+TGG | - | chr8.1:31951333-31951352 | MS.gene44209:CDS | 55.0% | |
| CTACCTCCTGCTCAACCAGA+AGG | + | chr8.1:31950414-31950433 | None:intergenic | 55.0% | |
| CTCTGCCATGTTGGCAGGTA+TGG | - | chr8.1:31949865-31949884 | MS.gene44209:CDS | 55.0% | |
| CTGGTTGAGCAGGAGGTAGT+TGG | - | chr8.1:31950415-31950434 | MS.gene44209:CDS | 55.0% | |
| CTGTAGTCCCTCCACTTGTG+TGG | + | chr8.1:31951171-31951190 | None:intergenic | 55.0% | |
| CTTGCTTACTAAGCCCCTCC+TGG | + | chr8.1:31951521-31951540 | None:intergenic | 55.0% | |
| GCGCTGGATGAATTCACTGG+TGG | - | chr8.1:31951732-31951751 | MS.gene44209:CDS | 55.0% | |
| GGACTCGTGTTGCCATCGTT+GGG | - | chr8.1:31951319-31951338 | MS.gene44209:CDS | 55.0% | |
| GGAGGGGCTTAGTAAGCAAG+AGG | - | chr8.1:31951521-31951540 | MS.gene44209:CDS | 55.0% | |
| GGTCTGGATGGAGACGAAGA+AGG | + | chr8.1:31951500-31951519 | None:intergenic | 55.0% | |
| GTTGCCATCGTTGGGCCTAA+TGG | - | chr8.1:31951327-31951346 | MS.gene44209:CDS | 55.0% | |
| TATGCAGAAGCTTTCGGGGC+AGG | + | chr8.1:31949944-31949963 | None:intergenic | 55.0% | |
| TCTGTCTCTGCCATGTTGGC+AGG | - | chr8.1:31949860-31949879 | MS.gene44209:CDS | 55.0% | |
| TCTTCGTCTCCATCCAGACC+AGG | - | chr8.1:31951500-31951519 | MS.gene44209:CDS | 55.0% | |
| TTACTAAGCCCCTCCTGGTC+TGG | + | chr8.1:31951516-31951535 | None:intergenic | 55.0% | |
| ! | GAAGCTTTCGGGGCAGGTTT+TGG | + | chr8.1:31949938-31949957 | None:intergenic | 55.0% |
| ! | GGTGTGAGTTCAGTGGGTTC+AGG | + | chr8.1:31951210-31951229 | None:intergenic | 55.0% |
| ! | TGTCCTTCTGGTTGAGCAGG+AGG | - | chr8.1:31950408-31950427 | MS.gene44209:CDS | 55.0% |
| !! | TGATGCATTGGCTGATGCGC+TGG | - | chr8.1:31951716-31951735 | MS.gene44209:CDS | 55.0% |
| AGCTGCCCATGTGGCTGAAC+AGG | - | chr8.1:31950105-31950124 | MS.gene44209:CDS | 60.0% | |
| CAAGTGGAGGGACTACAGCG+TGG | - | chr8.1:31951173-31951192 | MS.gene44209:CDS | 60.0% | |
| CATCCTCCAGCCGCCACTAA+AGG | + | chr8.1:31950710-31950729 | None:intergenic | 60.0% | |
| CGTCTCCATCCAGACCAGGA+GGG | - | chr8.1:31951504-31951523 | MS.gene44209:CDS | 60.0% | |
| GGGACTCGTGTTGCCATCGT+TGG | - | chr8.1:31951318-31951337 | MS.gene44209:CDS | 60.0% | |
| GTCTCCATCCAGACCAGGAG+GGG | - | chr8.1:31951505-31951524 | MS.gene44209:CDS | 60.0% | |
| TAAGCCCCTCCTGGTCTGGA+TGG | + | chr8.1:31951512-31951531 | None:intergenic | 60.0% | |
| TCGTCTCCATCCAGACCAGG+AGG | - | chr8.1:31951503-31951522 | MS.gene44209:CDS | 60.0% | |
| AGGAGGGCAGAAAGCTCGGG+TGG | - | chr8.1:31951614-31951633 | MS.gene44209:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 31949776 | 31951923 | 31949776 | ID=MS.gene44209 |
| chr8.1 | mRNA | 31949776 | 31951923 | 31949776 | ID=MS.gene44209.t1;Parent=MS.gene44209 |
| chr8.1 | exon | 31949776 | 31951923 | 31949776 | ID=MS.gene44209.t1.exon1;Parent=MS.gene44209.t1 |
| chr8.1 | CDS | 31949776 | 31951923 | 31949776 | ID=cds.MS.gene44209.t1;Parent=MS.gene44209.t1 |
| Gene Sequence |
| Protein sequence |
