Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06105.t1 | XP_013447237.1 | 85.6 | 194 | 28 | 0 | 1 | 194 | 1 | 194 | 5.00E-85 | 323.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06105.t1 | Q8VY91 | 79.0 | 157 | 31 | 2 | 41 | 195 | 50 | 206 | 4.9e-65 | 248.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06105.t1 | A0A072TUR4 | 85.6 | 194 | 28 | 0 | 1 | 194 | 1 | 194 | 3.6e-85 | 323.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049285 | MS.gene06105 | 0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene049320 | MS.gene06105 | 0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene06105 | 0.838078 | 3.56E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene06105 | 0.840798 | 7.00E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene06105 | 0.819005 | 1.46E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene06105 | 0.807677 | 4.50E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene06105 | 0.849014 | 4.24E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene06105 | 0.818158 | 2.27E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene06105 | 0.811764 | 5.95E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene06105 | 0.823927 | 1.06E-53 | -1.69E-46 |
| MS.gene06105 | MS.gene06194 | 0.838728 | 2.42E-57 | -1.69E-46 |
| MS.gene06105 | MS.gene063091 | 0.807374 | 5.22E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene06445 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene064800 | 0.818031 | 2.42E-52 | -1.69E-46 |
| MS.gene06105 | MS.gene064867 | 0.82024 | 7.61E-53 | -1.69E-46 |
| MS.gene06105 | MS.gene066844 | 0.812968 | 3.25E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene067479 | 0.80743 | 5.07E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene06893 | 0.809225 | 2.10E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene071525 | 0.815597 | 8.52E-52 | -1.69E-46 |
| MS.gene06105 | MS.gene071526 | 0.804018 | 2.64E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene071527 | 0.824577 | 7.49E-54 | -1.69E-46 |
| MS.gene06105 | MS.gene074248 | 0.81375 | 2.19E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene074567 | 0.813784 | 2.15E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene09661 | 0.809831 | 1.56E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene09720 | 0.844258 | 8.45E-59 | -1.69E-46 |
| MS.gene06105 | MS.gene09722 | 0.838117 | 3.48E-57 | -1.69E-46 |
| MS.gene06105 | MS.gene21474 | 0.815268 | 1.01E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene22275 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene23914 | 0.815063 | 1.12E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene23996 | 0.814799 | 1.28E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene24329 | 0.830466 | 2.89E-55 | -1.69E-46 |
| MS.gene06105 | MS.gene24674 | 0.81503 | 1.14E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene24767 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene26698 | 0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene26917 | 0.81317 | 2.93E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene27358 | 0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene27932 | 0.802908 | 4.49E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene33047 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene33825 | 0.812248 | 4.67E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene36056 | 0.804678 | 1.92E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene37487 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene40702 | 0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene41080 | 0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene42342 | 0.81487 | 1.24E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene45433 | 0.824606 | 7.37E-54 | -1.69E-46 |
| MS.gene06105 | MS.gene45693 | 0.827481 | 1.53E-54 | -1.69E-46 |
| MS.gene06105 | MS.gene46952 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene48506 | 0.804143 | 2.49E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene49416 | 0.80154 | 8.58E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene49743 | 0.813629 | 2.32E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene52799 | 0.817772 | 2.77E-52 | -1.69E-46 |
| MS.gene06105 | MS.gene59138 | 0.808235 | 3.42E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene62792 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene68138 | 0.802204 | 6.27E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene69357 | 0.822083 | 2.86E-53 | -1.69E-46 |
| MS.gene06105 | MS.gene69734 | 0.835643 | 1.49E-56 | -1.69E-46 |
| MS.gene06105 | MS.gene72216 | 0.808049 | 3.75E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene73087 | 0.812987 | 3.21E-51 | -1.69E-46 |
| MS.gene06105 | MS.gene75145 | 0.80818 | 3.52E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene75561 | 0.819284 | 1.26E-52 | -1.69E-46 |
| MS.gene06105 | MS.gene75639 | 0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene79026 | 0.803734 | 3.03E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene80966 | 0.801359 | 9.35E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene83606 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene88851 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene06105 | MS.gene90364 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene06105 | MS.gene90864 | 0.819103 | 1.38E-52 | -1.69E-46 |
| MS.gene06105 | MS.gene94829 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene06105 | MS.gene94848 | 0.804425 | 2.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06105.t1 | MTR_8g099720 | 94.330 | 194 | 11 | 0 | 1 | 194 | 1 | 194 | 3.06e-137 | 381 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06105.t1 | AT1G64510 | 67.961 | 206 | 55 | 5 | 1 | 195 | 1 | 206 | 7.01e-90 | 262 |
| MS.gene06105.t1 | AT1G64510 | 67.961 | 206 | 55 | 5 | 1 | 195 | 25 | 230 | 1.52e-89 | 262 |
Find 57 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGACCTCCTCGTACTTC+TGG | 0.218535 | 4.2:-4083748 | None:intergenic |
| CGGAAAAGTTGTTCCTGTTT+TGG | 0.256932 | 4.2:-4083526 | None:intergenic |
| TTTGTGCAGCTTCTTGTTGC+TGG | 0.267997 | 4.2:+4086534 | MS.gene06105:intron |
| TCTTTCTTTGAAGGTGGATT+TGG | 0.299334 | 4.2:+4083578 | MS.gene06105:CDS |
| CTTTGAAGGTGGATTTGGTT+CGG | 0.301133 | 4.2:+4083583 | MS.gene06105:CDS |
| TTCTCTGGTTCTTTCTTTGA+AGG | 0.306160 | 4.2:+4083569 | MS.gene06105:CDS |
| TGAAAGTGGGAAATTGATTC+AGG | 0.316800 | 4.2:-4083503 | None:intergenic |
| TGTTTGCTCAAGGGCGGTTA+TGG | 0.323023 | 4.2:-4086697 | None:intergenic |
| AACCCGGTTCCGGGAGTAAC+CGG | 0.325603 | 4.2:-4083614 | None:intergenic |
| CAAGCTTCAAAATCAGAAAA+AGG | 0.332411 | 4.2:+4086751 | MS.gene06105:CDS |
| CACAGCAGTGAACCCGGTTC+CGG | 0.337320 | 4.2:-4083624 | None:intergenic |
| GACCCGGTTACTCCCGGAAC+CGG | 0.340544 | 4.2:+4083611 | MS.gene06105:CDS |
| ACAGCAGTGAACCCGGTTCC+GGG | 0.353594 | 4.2:-4083623 | None:intergenic |
| TTTCCCACTTTCACCAAAAC+AGG | 0.358476 | 4.2:+4083513 | MS.gene06105:CDS |
| GCCTAGGGTTTCTGCTTTAA+CGG | 0.367900 | 4.2:-4083546 | None:intergenic |
| TTTGAAGGTGGATTTGGTTC+GGG | 0.368108 | 4.2:+4083584 | MS.gene06105:CDS |
| AGGAGAAACCAACACGTATA+TGG | 0.379973 | 4.2:+4086632 | MS.gene06105:CDS |
| CAGCTTCTTGTTGCTGGAGG+TGG | 0.388533 | 4.2:+4086540 | MS.gene06105:intron |
| GCAGAAACCCTAGGCTTCTC+TGG | 0.408153 | 4.2:+4083554 | MS.gene06105:CDS |
| TTTGACCTCCTCGTACTTCT+GGG | 0.421257 | 4.2:-4083747 | None:intergenic |
| AGAAAAGAAGAAGATGAAAG+TGG | 0.446274 | 4.2:-4083443 | None:intergenic |
| GATTCAGGAAATGCACGAAA+TGG | 0.457389 | 4.2:-4083488 | None:intergenic |
| TCTGGTTCTTTCTTTGAAGG+TGG | 0.458081 | 4.2:+4083572 | MS.gene06105:CDS |
| AGAAAGAACCAGAGAAGCCT+AGG | 0.460314 | 4.2:-4083562 | None:intergenic |
| CGCTCATCCTCAGACATGTC+AGG | 0.460581 | 4.2:-4083713 | None:intergenic |
| CTCTTCCACAGCAGTGAACC+CGG | 0.461041 | 4.2:-4083630 | None:intergenic |
| GCTTCGTGAAGTAGGTGAAT+AGG | 0.462140 | 4.2:-4086668 | None:intergenic |
| CCTTGAGCAAACACTATTGA+CGG | 0.475105 | 4.2:+4086707 | MS.gene06105:CDS |
| CGGAACCGGGTTCACTGCTG+TGG | 0.505880 | 4.2:+4083625 | MS.gene06105:CDS |
| GGACTCAGGCTTCGTGAAGT+AGG | 0.512180 | 4.2:-4086676 | None:intergenic |
| TCAAGGGCGGTTATGGACTC+AGG | 0.515051 | 4.2:-4086690 | None:intergenic |
| TTCTGGATGCTATATGCTAG+TGG | 0.517463 | 4.2:-4086597 | None:intergenic |
| ATTTGGTTCGGGTGATGACC+CGG | 0.523594 | 4.2:+4083595 | MS.gene06105:CDS |
| GTGCAGCTTCTTGTTGCTGG+AGG | 0.528018 | 4.2:+4086537 | MS.gene06105:intron |
| TGGAATTGAATTGAGTAAAG+AGG | 0.543427 | 4.2:-4083423 | None:intergenic |
| TCCGTTAAAGCAGAAACCCT+AGG | 0.546122 | 4.2:+4083545 | MS.gene06105:CDS |
| CCGTCAATAGTGTTTGCTCA+AGG | 0.548980 | 4.2:-4086707 | None:intergenic |
| GGTGATGACCCGGTTACTCC+CGG | 0.551404 | 4.2:+4083605 | MS.gene06105:CDS |
| GTTTCGTACTGTCTGAGTCC+AGG | 0.554379 | 4.2:-4083674 | None:intergenic |
| ACCCGGTTCCGGGAGTAACC+GGG | 0.557475 | 4.2:-4083613 | None:intergenic |
| CGTCAATAGTGTTTGCTCAA+GGG | 0.562059 | 4.2:-4086706 | None:intergenic |
| GAAGAACCGCAATGTCCACC+TGG | 0.563779 | 4.2:+4083656 | MS.gene06105:CDS |
| ACCCGGTTACTCCCGGAACC+GGG | 0.574089 | 4.2:+4083612 | MS.gene06105:CDS |
| GATGCCGTCCATATACGTGT+TGG | 0.610520 | 4.2:-4086640 | None:intergenic |
| GAAAGAACCAGAGAAGCCTA+GGG | 0.615293 | 4.2:-4083561 | None:intergenic |
| CTGAGTCCAGGTGGACATTG+CGG | 0.619818 | 4.2:-4083662 | None:intergenic |
| TCGTGAAGTAGGTGAATAGG+AGG | 0.634881 | 4.2:-4086665 | None:intergenic |
| CAATAGTGTTTGCTCAAGGG+CGG | 0.640418 | 4.2:-4086703 | None:intergenic |
| GAAACCAACACGTATATGGA+CGG | 0.655460 | 4.2:+4086636 | MS.gene06105:CDS |
| TGGAGGTGGCATGTATGTAG+AGG | 0.659352 | 4.2:+4086554 | MS.gene06105:CDS |
| TTTAAGGCCTGACATGTCTG+AGG | 0.660772 | 4.2:+4083706 | MS.gene06105:CDS |
| GTCAGGCCTTAAAACAACCA+TGG | 0.661319 | 4.2:-4083696 | None:intergenic |
| TGCACTCACCCAGAAGTACG+AGG | 0.696215 | 4.2:+4083739 | MS.gene06105:CDS |
| CGAAATGGAGAAGATGACTG+AGG | 0.700648 | 4.2:-4083473 | None:intergenic |
| ACTCAGACAGTACGAAACCA+TGG | 0.703252 | 4.2:+4083679 | MS.gene06105:CDS |
| TCGTACTGTCTGAGTCCAGG+TGG | 0.716797 | 4.2:-4083671 | None:intergenic |
| ACTCACCCAGAAGTACGAGG+AGG | 0.791351 | 4.2:+4083742 | MS.gene06105:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATTTAAGGATTTA+GGG | - | chr4.2:4084458-4084477 | None:intergenic | 10.0% |
| !!! | ATTTAAGGATTTAAAATTTA+AGG | - | chr4.2:4084466-4084485 | None:intergenic | 10.0% |
| !! | TAAAATAAAAAAGAGCAAAT+AGG | - | chr4.2:4085747-4085766 | None:intergenic | 15.0% |
| !!! | GATTTAAAATTTAAGGATTT+AGG | - | chr4.2:4084459-4084478 | None:intergenic | 15.0% |
| !! | AGGAATTTGATATTCAATTT+GGG | + | chr4.2:4085508-4085527 | MS.gene06105:intron | 20.0% |
| !! | TAGGAATTTGATATTCAATT+TGG | + | chr4.2:4085507-4085526 | MS.gene06105:intron | 20.0% |
| !! | TAGGGATTTGATATTTAATT+TGG | - | chr4.2:4084440-4084459 | None:intergenic | 20.0% |
| !! | TGATAATTAGATGACATTTA+AGG | - | chr4.2:4084481-4084500 | None:intergenic | 20.0% |
| !!! | AATTTGGGAATATTGATTTT+TGG | + | chr4.2:4085523-4085542 | MS.gene06105:intron | 20.0% |
| !!! | AGGGATTTGATATTTAATTT+GGG | - | chr4.2:4084439-4084458 | None:intergenic | 20.0% |
| !!! | GAGAAATTTGATAATAAACT+TGG | + | chr4.2:4085098-4085117 | MS.gene06105:intron | 20.0% |
| !!! | GGATATTAATTTAACTTCAA+CGG | - | chr4.2:4086384-4086403 | None:intergenic | 20.0% |
| !!! | TAAAATTTGTTCTACTTAGT+AGG | - | chr4.2:4085160-4085179 | None:intergenic | 20.0% |
| ! | AAAAAATAGAGAACAATGGA+AGG | - | chr4.2:4085918-4085937 | None:intergenic | 25.0% |
| ! | AAAAAATCTGTTAAGTGATG+AGG | + | chr4.2:4084334-4084353 | MS.gene06105:intron | 25.0% |
| ! | AAAAATAGAGAACAATGGAA+GGG | - | chr4.2:4085917-4085936 | None:intergenic | 25.0% |
| ! | AAATTTCGTATTTACTGTCA+GGG | - | chr4.2:4084584-4084603 | None:intergenic | 25.0% |
| ! | AGAGAATTAGATGACATTTA+GGG | + | chr4.2:4085466-4085485 | MS.gene06105:intron | 25.0% |
| ! | AGCAATGACTTATTCAAATA+AGG | - | chr4.2:4084053-4084072 | None:intergenic | 25.0% |
| ! | ATCAATGCAATAACTTTAAG+CGG | - | chr4.2:4086213-4086232 | None:intergenic | 25.0% |
| ! | ATGGAGAAATGAATTATGAA+CGG | + | chr4.2:4084768-4084787 | MS.gene06105:intron | 25.0% |
| ! | ATTAAACACAACTTAGTGTA+AGG | - | chr4.2:4085423-4085442 | None:intergenic | 25.0% |
| ! | ATTCACTTACTAAAATACAC+AGG | + | chr4.2:4084898-4084917 | MS.gene06105:intron | 25.0% |
| ! | CACTTAGTTTATCATTCAAA+TGG | - | chr4.2:4083801-4083820 | None:intergenic | 25.0% |
| ! | GATTGCAATTCTAACAAATA+TGG | - | chr4.2:4083897-4083916 | None:intergenic | 25.0% |
| ! | GGATTAACTTAACAAACAAA+AGG | - | chr4.2:4083780-4083799 | None:intergenic | 25.0% |
| ! | GTGTATACTTACTATCAATT+AGG | - | chr4.2:4085391-4085410 | None:intergenic | 25.0% |
| ! | TGATGCCATTATATACTAAA+GGG | - | chr4.2:4084737-4084756 | None:intergenic | 25.0% |
| ! | TTATTCCAATGAGAAAAGAA+TGG | - | chr4.2:4086491-4086510 | None:intergenic | 25.0% |
| ! | TTGTATTTAATCCTAAGTCA+GGG | - | chr4.2:4084265-4084284 | None:intergenic | 25.0% |
| ! | TTTCTCCCTTTAGTATATAA+TGG | + | chr4.2:4084729-4084748 | MS.gene06105:intron | 25.0% |
| ! | TTTGTATTTAATCCTAAGTC+AGG | - | chr4.2:4084266-4084285 | None:intergenic | 25.0% |
| !! | ATTTAGGGATTTGAGATTTA+AGG | + | chr4.2:4085481-4085500 | MS.gene06105:intron | 25.0% |
| !! | CAACAACAATATCCAATTTT+TGG | + | chr4.2:4084847-4084866 | MS.gene06105:intron | 25.0% |
| !! | GATTTGAGATTTAAGGATTT+AGG | + | chr4.2:4085488-4085507 | MS.gene06105:intron | 25.0% |
| !!! | AACAGATTTTTTTAACGTCA+GGG | - | chr4.2:4084326-4084345 | None:intergenic | 25.0% |
| !!! | AAGTGTTTGTTTTGAAAGAA+TGG | - | chr4.2:4084002-4084021 | None:intergenic | 25.0% |
| !!! | AATTTGGGGATATTGATTTT+TGG | - | chr4.2:4084424-4084443 | None:intergenic | 25.0% |
| !!! | CAAGCTATGACTTTAAAATA+GGG | - | chr4.2:4084810-4084829 | None:intergenic | 25.0% |
| !!! | GATTTGCTAATTTATTGTCA+GGG | + | chr4.2:4085364-4085383 | MS.gene06105:intron | 25.0% |
| !!! | GGGATTTGATATTTAATTTG+GGG | - | chr4.2:4084438-4084457 | None:intergenic | 25.0% |
| !!! | TAACAGATTTTTTTAACGTC+AGG | - | chr4.2:4084327-4084346 | None:intergenic | 25.0% |
| !!! | TCAAGCTATGACTTTAAAAT+AGG | - | chr4.2:4084811-4084830 | None:intergenic | 25.0% |
| AAAATAGAGAACAATGGAAG+GGG | - | chr4.2:4085916-4085935 | None:intergenic | 30.0% | |
| AAAGTAGAAAATGGTCACTT+TGG | + | chr4.2:4084390-4084409 | MS.gene06105:intron | 30.0% | |
| AAAGTAGAAAATGGTCACTT+TGG | - | chr4.2:4084409-4084390 | None:intergenic | 30.0% | |
| AAAGTCCTTGGCTATTTATT+AGG | + | chr4.2:4084608-4084627 | MS.gene06105:intron | 30.0% | |
| AAGTAGAACTTATGCTTTAG+TGG | + | chr4.2:4085043-4085062 | MS.gene06105:intron | 30.0% | |
| ACATTCAGATTTGTACAAGA+AGG | + | chr4.2:4084981-4085000 | MS.gene06105:intron | 30.0% | |
| ACCAAAGTGAAAGTAGAAAA+TGG | + | chr4.2:4084381-4084400 | MS.gene06105:intron | 30.0% | |
| ACCAAAGTGAAAGTAGAAAA+TGG | - | chr4.2:4084400-4084381 | None:intergenic | 30.0% | |
| AGAAAAGAAGAAGATGAAAG+TGG | - | chr4.2:4083446-4083465 | None:intergenic | 30.0% | |
| AGTTAGAGTCAAATCAAACT+TGG | - | chr4.2:4086405-4086424 | None:intergenic | 30.0% | |
| ATGATAAACTAAGTGCTCTA+TGG | + | chr4.2:4083806-4083825 | MS.gene06105:intron | 30.0% | |
| ATGCACAATGTCTTAAACTA+TGG | - | chr4.2:4084953-4084972 | None:intergenic | 30.0% | |
| CAAATTTCTCCACCAAAAAT+TGG | - | chr4.2:4084862-4084881 | None:intergenic | 30.0% | |
| CAAGCTTCAAAATCAGAAAA+AGG | + | chr4.2:4086751-4086770 | MS.gene06105:CDS | 30.0% | |
| CTGATGCCATTATATACTAA+AGG | - | chr4.2:4084738-4084757 | None:intergenic | 30.0% | |
| CTTTAGTATATAATGGCATC+AGG | + | chr4.2:4084736-4084755 | MS.gene06105:intron | 30.0% | |
| GAAATTTCGTATTTACTGTC+AGG | - | chr4.2:4084585-4084604 | None:intergenic | 30.0% | |
| GAACTCAAAAATTGTATTGG+AGG | - | chr4.2:4085839-4085858 | None:intergenic | 30.0% | |
| GAGAGAATTAGATGACATTT+AGG | + | chr4.2:4085465-4085484 | MS.gene06105:intron | 30.0% | |
| GTGGAAAAAATAGAGAACAA+TGG | - | chr4.2:4085922-4085941 | None:intergenic | 30.0% | |
| GTTCACAATTGTGATTCTTA+AGG | + | chr4.2:4086336-4086355 | MS.gene06105:intron | 30.0% | |
| TATATACTAAAGGGAGAAAG+AGG | - | chr4.2:4084728-4084747 | None:intergenic | 30.0% | |
| TATTCAAATAAGGTCGCAAA+GGG | - | chr4.2:4084043-4084062 | None:intergenic | 30.0% | |
| TCAAAAATTGTATTGGAGGA+GGG | - | chr4.2:4085835-4085854 | None:intergenic | 30.0% | |
| TCAAGAGTAATAGATGCTAA+TGG | + | chr4.2:4085342-4085361 | MS.gene06105:intron | 30.0% | |
| TGGAATTGAATTGAGTAAAG+AGG | - | chr4.2:4083426-4083445 | None:intergenic | 30.0% | |
| TGGGAACTCAAAAATTGTAT+TGG | - | chr4.2:4085842-4085861 | None:intergenic | 30.0% | |
| TTATTCAAATAAGGTCGCAA+AGG | - | chr4.2:4084044-4084063 | None:intergenic | 30.0% | |
| TTGTACAAATCTGAATGTCA+TGG | - | chr4.2:4084979-4084998 | None:intergenic | 30.0% | |
| TTGTATTTAATCCTGAGTGA+AGG | + | chr4.2:4085681-4085700 | MS.gene06105:intron | 30.0% | |
| ! | AAATCTGTTAAGTGATGATG+TGG | - | chr4.2:4085609-4085628 | None:intergenic | 30.0% |
| ! | ACCATTTTCTACTTTCACTT+TGG | + | chr4.2:4085561-4085580 | MS.gene06105:intron | 30.0% |
| ! | ACCATTTTCTACTTTCACTT+TGG | - | chr4.2:4085580-4085561 | None:intergenic | 30.0% |
| ! | ATTTTGTTCTACGAGACTTA+TGG | + | chr4.2:4086168-4086187 | MS.gene06105:intron | 30.0% |
| ! | CTATACCATTCTTTTCTCAT+TGG | + | chr4.2:4086483-4086502 | MS.gene06105:intron | 30.0% |
| ! | CTATTTATTAGGCACCTTTT+CGG | + | chr4.2:4084619-4084638 | MS.gene06105:intron | 30.0% |
| ! | TATGTAGAGGTTTTTAACAG+AGG | + | chr4.2:4086567-4086586 | MS.gene06105:CDS | 30.0% |
| !! | CAACAATATCCAATTTTTGG+TGG | + | chr4.2:4084850-4084869 | MS.gene06105:intron | 30.0% |
| !! | GGATTTGCTAATTTATTGTC+AGG | + | chr4.2:4085363-4085382 | MS.gene06105:intron | 30.0% |
| !!! | AACAGATTTTTTGAACGTCA+GGG | + | chr4.2:4085620-4085639 | MS.gene06105:intron | 30.0% |
| !!! | GGAATATTGATTTTTGGTTC+AGG | + | chr4.2:4085529-4085548 | MS.gene06105:intron | 30.0% |
| !!! | GGATATTGATTTTTGGTTCA+GGG | - | chr4.2:4084417-4084436 | None:intergenic | 30.0% |
| !!! | GTTTGTTTTGAAAGAATGGA+GGG | - | chr4.2:4083998-4084017 | None:intergenic | 30.0% |
| !!! | TAACAGATTTTTTGAACGTC+AGG | + | chr4.2:4085619-4085638 | MS.gene06105:intron | 30.0% |
| !!! | TGATTTTGAAGCTTGTTGAT+CGG | - | chr4.2:4086746-4086765 | None:intergenic | 30.0% |
| !!! | TGTTTGTTTTGAAAGAATGG+AGG | - | chr4.2:4083999-4084018 | None:intergenic | 30.0% |
| AAAAGAGCAAATAGGCACTT+TGG | - | chr4.2:4085739-4085758 | None:intergenic | 35.0% | |
| AAATCTGTTAAGTGATGAGG+TGG | + | chr4.2:4084337-4084356 | MS.gene06105:intron | 35.0% | |
| AATAAGTCATTGCTCTGCTT+CGG | + | chr4.2:4084059-4084078 | MS.gene06105:intron | 35.0% | |
| ATAGTAAGTATACACAGCCA+GGG | + | chr4.2:4085396-4085415 | MS.gene06105:intron | 35.0% | |
| ATAGTAAGTATGCACAGTCA+GGG | - | chr4.2:4084552-4084571 | None:intergenic | 35.0% | |
| ATAGTAGTGTCATAGTGTTG+TGG | + | chr4.2:4084694-4084713 | MS.gene06105:intron | 35.0% | |
| ATCCAGAAGAAAAACAAGGA+AGG | + | chr4.2:4086612-4086631 | MS.gene06105:CDS | 35.0% | |
| ATCTTGAGGCAATGATATGT+TGG | + | chr4.2:4084653-4084672 | MS.gene06105:intron | 35.0% | |
| ATGGGAAATATAGGGGAAAA+TGG | + | chr4.2:4084109-4084128 | MS.gene06105:intron | 35.0% | |
| ATTCAAATAAGGTCGCAAAG+GGG | - | chr4.2:4084042-4084061 | None:intergenic | 35.0% | |
| CGAAATTTCACTAAAGTCCT+TGG | + | chr4.2:4084596-4084615 | MS.gene06105:intron | 35.0% | |
| CTCAAAAATTGTATTGGAGG+AGG | - | chr4.2:4085836-4085855 | None:intergenic | 35.0% | |
| CTGCACAAAGGAAAATCATT+AGG | - | chr4.2:4086523-4086542 | None:intergenic | 35.0% | |
| GTGCATACTTACTATCAGTT+AGG | + | chr4.2:4084557-4084576 | MS.gene06105:intron | 35.0% | |
| TAGCATCCAGAAGAAAAACA+AGG | + | chr4.2:4086608-4086627 | MS.gene06105:CDS | 35.0% | |
| TCTTGAGGCAATGATATGTT+GGG | + | chr4.2:4084654-4084673 | MS.gene06105:intron | 35.0% | |
| TGGCATCAGGATTACATATA+TGG | + | chr4.2:4084749-4084768 | MS.gene06105:intron | 35.0% | |
| TTAAACACCAACCTACTGTT+TGG | + | chr4.2:4084525-4084544 | MS.gene06105:intron | 35.0% | |
| TTATTGTATGCTCAGACCTA+CGG | + | chr4.2:4085282-4085301 | MS.gene06105:intron | 35.0% | |
| ! | TCTTTCTTTGAAGGTGGATT+TGG | + | chr4.2:4083578-4083597 | MS.gene06105:CDS | 35.0% |
| ! | TGAAAGTGGGAAATTGATTC+AGG | - | chr4.2:4083506-4083525 | None:intergenic | 35.0% |
| ! | TGATGATGATGATGATGAGT+AGG | + | chr4.2:4083845-4083864 | MS.gene06105:intron | 35.0% |
| !! | AACAGTAGGTTGGTGTTTAA+TGG | - | chr4.2:4084525-4084544 | None:intergenic | 35.0% |
| !! | ACGAAACCATGGTTGTTTTA+AGG | + | chr4.2:4083690-4083709 | MS.gene06105:CDS | 35.0% |
| !! | ATTTTGGGGATGGGAAATAT+AGG | + | chr4.2:4084100-4084119 | MS.gene06105:intron | 35.0% |
| !! | TTCTCTGGTTCTTTCTTTGA+AGG | + | chr4.2:4083569-4083588 | MS.gene06105:CDS | 35.0% |
| !! | TTTTGGGGATGGGAAATATA+GGG | + | chr4.2:4084101-4084120 | MS.gene06105:intron | 35.0% |
| !!! | GAGGGTTTTGGAAAAAAGAA+AGG | - | chr4.2:4085950-4085969 | None:intergenic | 35.0% |
| !!! | GGGATATTGATTTTTGGTTC+AGG | - | chr4.2:4084418-4084437 | None:intergenic | 35.0% |
| !!! | TTTTTGAGTTCCCACAAATG+AGG | + | chr4.2:4085848-4085867 | MS.gene06105:intron | 35.0% |
| AAACTCGCAAACAAAGCCTA+GGG | + | chr4.2:4085986-4086005 | MS.gene06105:intron | 40.0% | |
| AACAAAACCCTCCTCATTTG+TGG | - | chr4.2:4085862-4085881 | None:intergenic | 40.0% | |
| AATTCATATCTCTACCCCGT+AGG | - | chr4.2:4085301-4085320 | None:intergenic | 40.0% | |
| ACAAAACCCTCCTCATTTGT+GGG | - | chr4.2:4085861-4085880 | None:intergenic | 40.0% | |
| ACAAAGCCTAGGGAAAAGAA+TGG | + | chr4.2:4085996-4086015 | MS.gene06105:intron | 40.0% | |
| AGGAGAAACCAACACGTATA+TGG | + | chr4.2:4086632-4086651 | MS.gene06105:CDS | 40.0% | |
| AGGTGCCTAATAAATAGCCA+AGG | - | chr4.2:4084616-4084635 | None:intergenic | 40.0% | |
| CCTTGAGCAAACACTATTGA+CGG | + | chr4.2:4086707-4086726 | MS.gene06105:CDS | 40.0% | |
| CGTCAATAGTGTTTGCTCAA+GGG | - | chr4.2:4086709-4086728 | None:intergenic | 40.0% | |
| GAAACCAACACGTATATGGA+CGG | + | chr4.2:4086636-4086655 | MS.gene06105:CDS | 40.0% | |
| GAACACTGATGCTAACTCTA+GGG | + | chr4.2:4086018-4086037 | MS.gene06105:intron | 40.0% | |
| GATAGTAAGTATACACAGCC+AGG | + | chr4.2:4085395-4085414 | MS.gene06105:intron | 40.0% | |
| GATAGTAAGTATGCACAGTC+AGG | - | chr4.2:4084553-4084572 | None:intergenic | 40.0% | |
| GATCAACTTTCAAGCCGAAA+AGG | - | chr4.2:4084636-4084655 | None:intergenic | 40.0% | |
| GATTCAGGAAATGCACGAAA+TGG | - | chr4.2:4083491-4083510 | None:intergenic | 40.0% | |
| GGAAAAAAGAAAGGAGCAAG+TGG | - | chr4.2:4085941-4085960 | None:intergenic | 40.0% | |
| GTCAGGGACTAAAGTGATAA+CGG | - | chr4.2:4085655-4085636 | None:intergenic | 40.0% | |
| TATTGTATGCTCAGACCTAC+GGG | + | chr4.2:4085283-4085302 | MS.gene06105:intron | 40.0% | |
| TTCTGGATGCTATATGCTAG+TGG | - | chr4.2:4086600-4086619 | None:intergenic | 40.0% | |
| TTTCCCACTTTCACCAAAAC+AGG | + | chr4.2:4083513-4083532 | MS.gene06105:CDS | 40.0% | |
| TTTGGGGATGGGAAATATAG+GGG | + | chr4.2:4084102-4084121 | MS.gene06105:intron | 40.0% | |
| ! | AGTGTTCCATTCTTTTCCCT+AGG | - | chr4.2:4086005-4086024 | None:intergenic | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr4.2:4085829-4085848 | None:intergenic | 40.0% |
| ! | CGGAAAAGTTGTTCCTGTTT+TGG | - | chr4.2:4083529-4083548 | None:intergenic | 40.0% |
| ! | CTTTGAAGGTGGATTTGGTT+CGG | + | chr4.2:4083583-4083602 | MS.gene06105:CDS | 40.0% |
| ! | TGATAACAGAAGTGCAGAGT+CGG | + | chr4.2:4085650-4085669 | MS.gene06105:intron | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr4.2:4085828-4085847 | None:intergenic | 40.0% |
| ! | TTTGAAGGTGGATTTGGTTC+GGG | + | chr4.2:4083584-4083603 | MS.gene06105:CDS | 40.0% |
| !! | TCTGGTTCTTTCTTTGAAGG+TGG | + | chr4.2:4083572-4083591 | MS.gene06105:CDS | 40.0% |
| !!! | CTCCTTCCTTGTTTTTCTTC+TGG | - | chr4.2:4086617-4086636 | None:intergenic | 40.0% |
| !!! | GTTCCTGTTTTGGTGAAAGT+GGG | - | chr4.2:4083519-4083538 | None:intergenic | 40.0% |
| !!! | TGTTCCTGTTTTGGTGAAAG+TGG | - | chr4.2:4083520-4083539 | None:intergenic | 40.0% |
| ACAACTTAGTGTAAGGTCCC+TGG | - | chr4.2:4085416-4085435 | None:intergenic | 45.0% | |
| ACTCAGACAGTACGAAACCA+TGG | + | chr4.2:4083679-4083698 | MS.gene06105:CDS | 45.0% | |
| AGAAAGAACCAGAGAAGCCT+AGG | - | chr4.2:4083565-4083584 | None:intergenic | 45.0% | |
| AGCAACAAGAAGCTGCACAA+AGG | - | chr4.2:4086535-4086554 | None:intergenic | 45.0% | |
| ATAGAGAACAATGGAAGGGG+AGG | - | chr4.2:4085913-4085932 | None:intergenic | 45.0% | |
| ATTGTATGCTCAGACCTACG+GGG | + | chr4.2:4085284-4085303 | MS.gene06105:intron | 45.0% | |
| ATTTGACCTCCTCGTACTTC+TGG | - | chr4.2:4083751-4083770 | None:intergenic | 45.0% | |
| CAAACTCGCAAACAAAGCCT+AGG | + | chr4.2:4085985-4086004 | MS.gene06105:intron | 45.0% | |
| CAATAGTGTTTGCTCAAGGG+CGG | - | chr4.2:4086706-4086725 | None:intergenic | 45.0% | |
| CCGTCAATAGTGTTTGCTCA+AGG | - | chr4.2:4086710-4086729 | None:intergenic | 45.0% | |
| CGAAATGGAGAAGATGACTG+AGG | - | chr4.2:4083476-4083495 | None:intergenic | 45.0% | |
| GAAAGAACCAGAGAAGCCTA+GGG | - | chr4.2:4083564-4083583 | None:intergenic | 45.0% | |
| GACAGTGAGCTGTAGAATCA+AGG | - | chr4.2:4084234-4084253 | None:intergenic | 45.0% | |
| GCCTAGGGTTTCTGCTTTAA+CGG | - | chr4.2:4083549-4083568 | None:intergenic | 45.0% | |
| GCTTCGTGAAGTAGGTGAAT+AGG | - | chr4.2:4086671-4086690 | None:intergenic | 45.0% | |
| GGAACACTGATGCTAACTCT+AGG | + | chr4.2:4086017-4086036 | MS.gene06105:intron | 45.0% | |
| GGCAATGATATGTTGGGCTT+AGG | + | chr4.2:4084660-4084679 | MS.gene06105:intron | 45.0% | |
| GTCAGGCCTTAAAACAACCA+TGG | - | chr4.2:4083699-4083718 | None:intergenic | 45.0% | |
| TAGAGAACAATGGAAGGGGA+GGG | - | chr4.2:4085912-4085931 | None:intergenic | 45.0% | |
| TCCGTTAAAGCAGAAACCCT+AGG | + | chr4.2:4083545-4083564 | MS.gene06105:CDS | 45.0% | |
| TCGTGAAGTAGGTGAATAGG+AGG | - | chr4.2:4086668-4086687 | None:intergenic | 45.0% | |
| TCTACAGCTCACTGTCACAT+AGG | + | chr4.2:4084238-4084257 | MS.gene06105:intron | 45.0% | |
| TGAAAGAATGGAGGGAGACA+AGG | - | chr4.2:4083990-4084009 | None:intergenic | 45.0% | |
| TGAGTTCCCACAAATGAGGA+GGG | + | chr4.2:4085852-4085871 | MS.gene06105:intron | 45.0% | |
| TTGAGTTCCCACAAATGAGG+AGG | + | chr4.2:4085851-4085870 | MS.gene06105:intron | 45.0% | |
| TTTGACCTCCTCGTACTTCT+GGG | - | chr4.2:4083750-4083769 | None:intergenic | 45.0% | |
| TTTGCGAGTTTGGAGGGAAA+GGG | - | chr4.2:4085977-4085996 | None:intergenic | 45.0% | |
| TTTGTGCAGCTTCTTGTTGC+TGG | + | chr4.2:4086534-4086553 | MS.gene06105:intron | 45.0% | |
| ! | ATAACGGAAGTGCAGAGTCA+GGG | - | chr4.2:4084294-4084313 | None:intergenic | 45.0% |
| ! | CGGCTTGAAAGTTGATCTTG+AGG | + | chr4.2:4084639-4084658 | MS.gene06105:intron | 45.0% |
| ! | GATAACAGAAGTGCAGAGTC+GGG | + | chr4.2:4085651-4085670 | MS.gene06105:intron | 45.0% |
| ! | GTGATGATGTGGTGCATATG+AGG | - | chr4.2:4085598-4085617 | None:intergenic | 45.0% |
| ! | TTTAAGGCCTGACATGTCTG+AGG | + | chr4.2:4083706-4083725 | MS.gene06105:CDS | 45.0% |
| !! | CTAGGCTTTGTTTGCGAGTT+TGG | - | chr4.2:4085987-4086006 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr4.2:4085983-4086002 | None:intergenic | 45.0% |
| !!! | AGGAGGGTTTTGGGATGTTT+TGG | - | chr4.2:4085819-4085838 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGGGATGTTTTGG+AGG | - | chr4.2:4085816-4085835 | None:intergenic | 45.0% |
| !!! | GGGTTTTGGGATGTTTTGGA+GGG | - | chr4.2:4085815-4085834 | None:intergenic | 45.0% |
| AAGTCATTGCTCTGCTTCGG+AGG | + | chr4.2:4084062-4084081 | MS.gene06105:intron | 50.0% | |
| AATGGAAGGGGAGGGATTTG+GGG | - | chr4.2:4085904-4085923 | None:intergenic | 50.0% | |
| ACAATGGAAGGGGAGGGATT+TGG | - | chr4.2:4085906-4085925 | None:intergenic | 50.0% | |
| ACAGTCAGGGACCAAACAGT+AGG | - | chr4.2:4084539-4084558 | None:intergenic | 50.0% | |
| AGTCATTGCTCTGCTTCGGA+GGG | + | chr4.2:4084063-4084082 | MS.gene06105:intron | 50.0% | |
| CAATGGAAGGGGAGGGATTT+GGG | - | chr4.2:4085905-4085924 | None:intergenic | 50.0% | |
| GATGCCGTCCATATACGTGT+TGG | - | chr4.2:4086643-4086662 | None:intergenic | 50.0% | |
| GTCACATAGGTCCCTGACTT+AGG | + | chr4.2:4084251-4084270 | MS.gene06105:intron | 50.0% | |
| GTCACATAGGTCCTTCACTC+AGG | - | chr4.2:4085695-4085714 | None:intergenic | 50.0% | |
| GTTTCGTACTGTCTGAGTCC+AGG | - | chr4.2:4083677-4083696 | None:intergenic | 50.0% | |
| GTTTGCGAGTTTGGAGGGAA+AGG | - | chr4.2:4085978-4085997 | None:intergenic | 50.0% | |
| TCAGGGACCAAACAGTAGGT+TGG | - | chr4.2:4084535-4084554 | None:intergenic | 50.0% | |
| TGGAGGTGGCATGTATGTAG+AGG | + | chr4.2:4086554-4086573 | MS.gene06105:CDS | 50.0% | |
| TGTTTGCTCAAGGGCGGTTA+TGG | - | chr4.2:4086700-4086719 | None:intergenic | 50.0% | |
| ! | GGTGCATATGAGGTGTCACA+GGG | - | chr4.2:4085588-4085607 | None:intergenic | 50.0% |
| ! | TGGTGCATATGAGGTGTCAC+AGG | - | chr4.2:4085589-4085608 | None:intergenic | 50.0% |
| !! | ATTTGGTTCGGGTGATGACC+CGG | + | chr4.2:4083595-4083614 | MS.gene06105:CDS | 50.0% |
| !! | GAAGGGAGGATTTTGGGGAT+GGG | + | chr4.2:4084091-4084110 | MS.gene06105:intron | 50.0% |
| !! | GATAACGGAAGTGCAGAGTC+AGG | - | chr4.2:4084295-4084314 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr4.2:4085984-4086003 | None:intergenic | 50.0% |
| ATGGAAGGGGAGGGATTTGG+GGG | - | chr4.2:4085903-4085922 | None:intergenic | 55.0% | |
| CAGCTTCTTGTTGCTGGAGG+TGG | + | chr4.2:4086540-4086559 | MS.gene06105:intron | 55.0% | |
| CGAGTTTGGAGGGAAAGGGA+GGG | - | chr4.2:4085973-4085992 | None:intergenic | 55.0% | |
| CGCTCATCCTCAGACATGTC+AGG | - | chr4.2:4083716-4083735 | None:intergenic | 55.0% | |
| CTCTTCCACAGCAGTGAACC+CGG | - | chr4.2:4083633-4083652 | None:intergenic | 55.0% | |
| CTGAGTCCAGGTGGACATTG+CGG | - | chr4.2:4083665-4083684 | None:intergenic | 55.0% | |
| GAAGAACCGCAATGTCCACC+TGG | + | chr4.2:4083656-4083675 | MS.gene06105:CDS | 55.0% | |
| GAAGGACCTATGTGACAGCG+AGG | + | chr4.2:4085699-4085718 | MS.gene06105:intron | 55.0% | |
| GAGTTTGGAGGGAAAGGGAG+GGG | - | chr4.2:4085972-4085991 | None:intergenic | 55.0% | |
| GCAGAAACCCTAGGCTTCTC+TGG | + | chr4.2:4083554-4083573 | MS.gene06105:CDS | 55.0% | |
| GGACTCAGGCTTCGTGAAGT+AGG | - | chr4.2:4086679-4086698 | None:intergenic | 55.0% | |
| GTCATTGCTCTGCTTCGGAG+GGG | + | chr4.2:4084064-4084083 | MS.gene06105:intron | 55.0% | |
| GTGATGAGGTGGCGCATATG+AGG | + | chr4.2:4084348-4084367 | MS.gene06105:intron | 55.0% | |
| GTGCAGCTTCTTGTTGCTGG+AGG | + | chr4.2:4086537-4086556 | MS.gene06105:intron | 55.0% | |
| TCAAGGGCGGTTATGGACTC+AGG | - | chr4.2:4086693-4086712 | None:intergenic | 55.0% | |
| TCGTACTGTCTGAGTCCAGG+TGG | - | chr4.2:4083674-4083693 | None:intergenic | 55.0% | |
| TCTGCACCTCGCTGTCACAT+AGG | - | chr4.2:4085708-4085727 | None:intergenic | 55.0% | |
| ! | ACTCACCCAGAAGTACGAGG+AGG | + | chr4.2:4083742-4083761 | MS.gene06105:CDS | 55.0% |
| ! | GAGGGGAAGGGAGGATTTTG+GGG | + | chr4.2:4084086-4084105 | MS.gene06105:intron | 55.0% |
| ! | GGAGGGGAAGGGAGGATTTT+GGG | + | chr4.2:4084085-4084104 | MS.gene06105:intron | 55.0% |
| ! | GGCGCATATGAGGTGTCACA+GGG | + | chr4.2:4084358-4084377 | MS.gene06105:intron | 55.0% |
| ! | TGCACTCACCCAGAAGTACG+AGG | + | chr4.2:4083739-4083758 | MS.gene06105:CDS | 55.0% |
| ! | TGGCGCATATGAGGTGTCAC+AGG | + | chr4.2:4084357-4084376 | MS.gene06105:intron | 55.0% |
| !! | GGAAGGGAGGATTTTGGGGA+TGG | + | chr4.2:4084090-4084109 | MS.gene06105:intron | 55.0% |
| AACCCGGTTCCGGGAGTAAC+CGG | - | chr4.2:4083617-4083636 | None:intergenic | 60.0% | |
| ACAGCAGTGAACCCGGTTCC+GGG | - | chr4.2:4083626-4083645 | None:intergenic | 60.0% | |
| ATTGCTCTGCTTCGGAGGGG+AGG | + | chr4.2:4084067-4084086 | MS.gene06105:intron | 60.0% | |
| CACAGCAGTGAACCCGGTTC+CGG | - | chr4.2:4083627-4083646 | None:intergenic | 60.0% | |
| GACAGCGAGGTGCAGAGTCA+GGG | + | chr4.2:4085712-4085731 | MS.gene06105:intron | 60.0% | |
| GCGAGTTTGGAGGGAAAGGG+AGG | - | chr4.2:4085974-4085993 | None:intergenic | 60.0% | |
| GGTGATGACCCGGTTACTCC+CGG | + | chr4.2:4083605-4083624 | MS.gene06105:CDS | 60.0% | |
| TGACAGCGAGGTGCAGAGTC+AGG | + | chr4.2:4085711-4085730 | MS.gene06105:intron | 60.0% | |
| TGGAAGGGGAGGGATTTGGG+GGG | - | chr4.2:4085902-4085921 | None:intergenic | 60.0% | |
| TTGCTCTGCTTCGGAGGGGA+GGG | + | chr4.2:4084068-4084087 | MS.gene06105:intron | 60.0% | |
| TTGGAGGGAAAGGGAGGGGA+GGG | - | chr4.2:4085968-4085987 | None:intergenic | 60.0% | |
| TTTGGAGGGAAAGGGAGGGG+AGG | - | chr4.2:4085969-4085988 | None:intergenic | 60.0% | |
| ! | GGAAAGGGAGGGGAGGGTTT+TGG | - | chr4.2:4085962-4085981 | None:intergenic | 60.0% |
| ! | GGGAGGGGAAGGGAGGATTT+TGG | + | chr4.2:4084084-4084103 | MS.gene06105:intron | 60.0% |
| ACCCGGTTACTCCCGGAACC+GGG | + | chr4.2:4083612-4083631 | MS.gene06105:CDS | 65.0% | |
| ACCCGGTTCCGGGAGTAACC+GGG | - | chr4.2:4083616-4083635 | None:intergenic | 65.0% | |
| CGGAACCGGGTTCACTGCTG+TGG | + | chr4.2:4083625-4083644 | MS.gene06105:CDS | 65.0% | |
| GACCCGGTTACTCCCGGAAC+CGG | + | chr4.2:4083611-4083630 | MS.gene06105:CDS | 65.0% | |
| TGCTCTGCTTCGGAGGGGAG+GGG | + | chr4.2:4084069-4084088 | MS.gene06105:intron | 65.0% | |
| TGCTTCGGAGGGGAGGGGAA+GGG | + | chr4.2:4084074-4084093 | MS.gene06105:intron | 65.0% | |
| CTGCTTCGGAGGGGAGGGGA+AGG | + | chr4.2:4084073-4084092 | MS.gene06105:intron | 70.0% | |
| TTCGGAGGGGAGGGGAAGGG+AGG | + | chr4.2:4084077-4084096 | MS.gene06105:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 4083416 | 4086782 | 4083416 | ID=MS.gene06105 |
| chr4.2 | mRNA | 4083416 | 4086782 | 4083416 | ID=MS.gene06105.t1;Parent=MS.gene06105 |
| chr4.2 | exon | 4083416 | 4083763 | 4083416 | ID=MS.gene06105.t1.exon1;Parent=MS.gene06105.t1 |
| chr4.2 | CDS | 4083416 | 4083763 | 4083416 | ID=cds.MS.gene06105.t1;Parent=MS.gene06105.t1 |
| chr4.2 | exon | 4086543 | 4086782 | 4086543 | ID=MS.gene06105.t1.exon2;Parent=MS.gene06105.t1 |
| chr4.2 | CDS | 4086543 | 4086782 | 4086543 | ID=cds.MS.gene06105.t1;Parent=MS.gene06105.t1 |
| Gene Sequence |
| Protein sequence |
