Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46072.t1 | XP_003623150.1 | 98.1 | 320 | 6 | 0 | 1 | 320 | 1 | 320 | 8.20E-178 | 632.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46072.t1 | Q54MZ4 | 39.9 | 303 | 164 | 6 | 25 | 319 | 142 | 434 | 5.8e-55 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46072.t1 | G7L5K1 | 98.1 | 320 | 6 | 0 | 1 | 320 | 1 | 320 | 5.9e-178 | 632.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene46072 | 0.828042 | 1.12E-54 | -1.69E-46 |
| MS.gene050026 | MS.gene46072 | 0.821642 | 3.62E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene46072 | 0.814489 | 1.50E-51 | -1.69E-46 |
| MS.gene052208 | MS.gene46072 | 0.822964 | 1.79E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene46072 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene46072 | 0.814875 | 1.23E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene46072 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene46072 | 0.814485 | 1.50E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene46072 | 0.806477 | 8.07E-50 | -1.69E-46 |
| MS.gene05308 | MS.gene46072 | 0.802091 | 6.61E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene46072 | 0.838938 | 2.14E-57 | -1.69E-46 |
| MS.gene05414 | MS.gene46072 | 0.8092 | 2.13E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene46072 | 0.805619 | 1.22E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene46072 | -0.803332 | 3.67E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene46072 | 0.857189 | 1.93E-62 | -1.69E-46 |
| MS.gene055589 | MS.gene46072 | 0.820098 | 8.21E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene46072 | 0.844959 | 5.47E-59 | -1.69E-46 |
| MS.gene056506 | MS.gene46072 | 0.805143 | 1.54E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene46072 | 0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene46072 | 0.806839 | 6.77E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene46072 | 0.814555 | 1.45E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene46072 | 0.810933 | 9.01E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene46072 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene46072 | 0.800758 | 1.24E-48 | -1.69E-46 |
| MS.gene060521 | MS.gene46072 | 0.80412 | 2.52E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46072.t1 | MTR_7g064980 | 98.125 | 320 | 6 | 0 | 1 | 320 | 1 | 320 | 0.0 | 644 |
| MS.gene46072.t1 | MTR_5g081150 | 69.279 | 319 | 91 | 3 | 1 | 315 | 7 | 322 | 6.18e-151 | 427 |
| MS.gene46072.t1 | MTR_5g081150 | 62.598 | 254 | 88 | 3 | 1 | 250 | 7 | 257 | 4.38e-100 | 295 |
| MS.gene46072.t1 | MTR_5g081150 | 64.082 | 245 | 81 | 3 | 1 | 241 | 7 | 248 | 9.60e-100 | 294 |
| MS.gene46072.t1 | MTR_5g009500 | 36.859 | 312 | 164 | 7 | 25 | 314 | 38 | 338 | 3.22e-56 | 186 |
| MS.gene46072.t1 | MTR_8g027975 | 34.839 | 310 | 175 | 6 | 25 | 314 | 51 | 353 | 8.83e-56 | 185 |
| MS.gene46072.t1 | MTR_6g091800 | 33.550 | 307 | 172 | 5 | 23 | 314 | 17 | 306 | 3.48e-50 | 169 |
| MS.gene46072.t1 | MTR_6g091800 | 31.515 | 330 | 170 | 5 | 24 | 314 | 18 | 330 | 2.34e-47 | 162 |
| MS.gene46072.t1 | MTR_4g119770 | 32.278 | 316 | 184 | 8 | 27 | 316 | 16 | 327 | 2.89e-47 | 162 |
| MS.gene46072.t1 | MTR_4g119770 | 26.108 | 203 | 126 | 5 | 136 | 318 | 16 | 214 | 9.17e-17 | 80.1 |
| MS.gene46072.t1 | MTR_1g012030 | 33.898 | 295 | 175 | 6 | 21 | 314 | 135 | 410 | 3.91e-47 | 164 |
| MS.gene46072.t1 | MTR_1g012030 | 26.733 | 202 | 127 | 6 | 15 | 212 | 223 | 407 | 8.36e-15 | 75.1 |
| MS.gene46072.t1 | MTR_7g068340 | 33.449 | 287 | 167 | 6 | 36 | 320 | 98 | 362 | 1.12e-46 | 162 |
| MS.gene46072.t1 | MTR_3g104600 | 33.123 | 317 | 169 | 9 | 22 | 314 | 32 | 329 | 1.20e-46 | 160 |
| MS.gene46072.t1 | MTR_3g104600 | 26.778 | 239 | 141 | 10 | 11 | 228 | 116 | 341 | 3.74e-12 | 66.6 |
| MS.gene46072.t1 | MTR_3g098460 | 31.329 | 316 | 190 | 8 | 7 | 315 | 186 | 481 | 5.11e-46 | 162 |
| MS.gene46072.t1 | MTR_3g098460 | 29.565 | 230 | 142 | 7 | 98 | 317 | 165 | 384 | 4.13e-22 | 96.7 |
| MS.gene46072.t1 | MTR_3g107510 | 33.898 | 295 | 175 | 7 | 21 | 314 | 118 | 393 | 9.49e-46 | 160 |
| MS.gene46072.t1 | MTR_3g107510 | 26.961 | 204 | 128 | 5 | 15 | 214 | 206 | 392 | 1.96e-18 | 85.5 |
| MS.gene46072.t1 | MTR_7g084400 | 33.221 | 298 | 168 | 7 | 25 | 315 | 213 | 486 | 1.17e-45 | 161 |
| MS.gene46072.t1 | MTR_7g084400 | 31.000 | 200 | 124 | 5 | 14 | 213 | 298 | 483 | 1.55e-22 | 98.2 |
| MS.gene46072.t1 | MTR_7g084400 | 28.947 | 228 | 148 | 4 | 98 | 317 | 173 | 394 | 8.32e-20 | 90.1 |
| MS.gene46072.t1 | MTR_8g096050 | 32.781 | 302 | 167 | 7 | 25 | 315 | 227 | 503 | 2.69e-45 | 161 |
| MS.gene46072.t1 | MTR_8g096050 | 30.594 | 219 | 127 | 5 | 1 | 213 | 301 | 500 | 1.60e-23 | 100 |
| MS.gene46072.t1 | MTR_8g096050 | 28.634 | 227 | 148 | 5 | 98 | 317 | 187 | 406 | 1.03e-20 | 92.8 |
| MS.gene46072.t1 | MTR_4g114320 | 32.698 | 315 | 188 | 8 | 4 | 314 | 100 | 394 | 4.20e-44 | 155 |
| MS.gene46072.t1 | MTR_2g436930 | 31.546 | 317 | 183 | 10 | 27 | 316 | 17 | 326 | 3.92e-43 | 151 |
| MS.gene46072.t1 | MTR_6g091800 | 35.081 | 248 | 129 | 5 | 23 | 255 | 17 | 247 | 5.92e-42 | 146 |
| MS.gene46072.t1 | MTR_6g091800 | 28.947 | 190 | 123 | 3 | 133 | 311 | 18 | 206 | 2.63e-19 | 86.3 |
| MS.gene46072.t1 | MTR_6g091800 | 35.081 | 248 | 129 | 5 | 23 | 255 | 17 | 247 | 6.38e-42 | 146 |
| MS.gene46072.t1 | MTR_6g091800 | 28.947 | 190 | 123 | 3 | 133 | 311 | 18 | 206 | 3.95e-19 | 85.9 |
| MS.gene46072.t1 | MTR_6g091800 | 30.449 | 312 | 161 | 5 | 24 | 296 | 18 | 312 | 4.44e-41 | 145 |
| MS.gene46072.t1 | MTR_4g016730 | 33.803 | 284 | 163 | 8 | 36 | 318 | 100 | 359 | 1.97e-40 | 145 |
| MS.gene46072.t1 | MTR_6g091800 | 32.472 | 271 | 127 | 5 | 24 | 255 | 18 | 271 | 5.64e-39 | 139 |
| MS.gene46072.t1 | MTR_6g091800 | 32.472 | 271 | 127 | 5 | 24 | 255 | 18 | 271 | 6.67e-39 | 139 |
| MS.gene46072.t1 | MTR_6g092210 | 32.400 | 250 | 151 | 4 | 74 | 314 | 6 | 246 | 4.87e-37 | 133 |
| MS.gene46072.t1 | MTR_6g092210 | 29.252 | 147 | 98 | 3 | 170 | 311 | 1 | 146 | 1.00e-14 | 73.2 |
| MS.gene46072.t1 | MTR_6g034145 | 31.641 | 256 | 151 | 4 | 74 | 314 | 6 | 252 | 1.35e-36 | 132 |
| MS.gene46072.t1 | MTR_6g034145 | 30.065 | 153 | 95 | 3 | 170 | 311 | 1 | 152 | 9.63e-15 | 73.2 |
| MS.gene46072.t1 | MTR_4g119770 | 31.048 | 248 | 150 | 5 | 27 | 256 | 16 | 260 | 3.55e-33 | 123 |
| MS.gene46072.t1 | MTR_4g119770 | 26.108 | 203 | 126 | 5 | 136 | 318 | 16 | 214 | 3.67e-17 | 80.1 |
| MS.gene46072.t1 | MTR_3g104500 | 29.097 | 299 | 196 | 7 | 24 | 315 | 33 | 322 | 1.05e-32 | 124 |
| MS.gene46072.t1 | MTR_8g090210 | 27.660 | 329 | 196 | 6 | 6 | 314 | 91 | 397 | 7.97e-32 | 123 |
| MS.gene46072.t1 | MTR_3g074490 | 28.485 | 330 | 189 | 8 | 5 | 314 | 101 | 403 | 2.46e-30 | 119 |
| MS.gene46072.t1 | MTR_2g436930 | 30.672 | 238 | 143 | 7 | 97 | 316 | 3 | 236 | 4.22e-28 | 109 |
| MS.gene46072.t1 | MTR_2g436930 | 29.870 | 154 | 93 | 4 | 76 | 215 | 81 | 233 | 1.07e-11 | 64.3 |
| MS.gene46072.t1 | MTR_7g109135 | 28.956 | 297 | 194 | 7 | 27 | 317 | 24 | 309 | 2.67e-27 | 109 |
| MS.gene46072.t1 | MTR_7g109135 | 38.202 | 89 | 52 | 2 | 230 | 316 | 23 | 110 | 2.48e-11 | 63.9 |
| MS.gene46072.t1 | MTR_7g109135 | 27.225 | 191 | 128 | 4 | 39 | 227 | 137 | 318 | 3.10e-11 | 63.5 |
| MS.gene46072.t1 | MTR_4g005330 | 25.325 | 308 | 198 | 6 | 22 | 314 | 63 | 353 | 4.26e-27 | 109 |
| MS.gene46072.t1 | MTR_4g005330 | 25.329 | 304 | 195 | 6 | 26 | 314 | 1 | 287 | 1.18e-26 | 107 |
| MS.gene46072.t1 | MTR_5g055410 | 29.655 | 290 | 177 | 8 | 37 | 315 | 33 | 306 | 2.57e-26 | 107 |
| MS.gene46072.t1 | MTR_5g055410 | 27.604 | 192 | 119 | 6 | 39 | 222 | 133 | 312 | 7.00e-12 | 65.9 |
| MS.gene46072.t1 | MTR_6g091800 | 33.702 | 181 | 94 | 3 | 23 | 190 | 17 | 184 | 2.22e-25 | 100 |
| MS.gene46072.t1 | MTR_6g091800 | 28.571 | 168 | 108 | 3 | 133 | 289 | 18 | 184 | 7.49e-15 | 72.0 |
| MS.gene46072.t1 | MTR_7g084400 | 31.364 | 220 | 127 | 6 | 25 | 237 | 207 | 409 | 1.53e-24 | 103 |
| MS.gene46072.t1 | MTR_7g084400 | 28.947 | 228 | 148 | 4 | 98 | 317 | 167 | 388 | 7.71e-20 | 89.7 |
| MS.gene46072.t1 | MTR_8g107270 | 26.948 | 308 | 200 | 10 | 23 | 319 | 16 | 309 | 4.54e-24 | 100 |
| MS.gene46072.t1 | MTR_3g028590 | 28.618 | 304 | 192 | 8 | 22 | 314 | 90 | 379 | 4.75e-24 | 101 |
| MS.gene46072.t1 | MTR_3g028590 | 28.618 | 304 | 192 | 8 | 22 | 314 | 94 | 383 | 5.32e-24 | 101 |
| MS.gene46072.t1 | MTR_8g036880 | 28.053 | 303 | 192 | 8 | 24 | 314 | 101 | 389 | 1.53e-23 | 100 |
| MS.gene46072.t1 | MTR_6g091800 | 38.732 | 142 | 74 | 2 | 24 | 165 | 18 | 146 | 1.92e-23 | 96.3 |
| MS.gene46072.t1 | MTR_6g091800 | 30.328 | 122 | 84 | 1 | 133 | 253 | 18 | 139 | 1.43e-11 | 63.5 |
| MS.gene46072.t1 | MTR_7g109135 | 28.231 | 294 | 193 | 7 | 27 | 317 | 24 | 302 | 4.10e-23 | 97.4 |
| MS.gene46072.t1 | MTR_7g109135 | 38.202 | 89 | 52 | 2 | 230 | 316 | 23 | 110 | 2.56e-11 | 63.9 |
| MS.gene46072.t1 | MTR_8g098240 | 26.897 | 290 | 190 | 6 | 26 | 315 | 321 | 588 | 1.20e-22 | 98.6 |
| MS.gene46072.t1 | MTR_8g098240 | 28.342 | 187 | 119 | 4 | 133 | 316 | 319 | 493 | 5.46e-13 | 69.7 |
| MS.gene46072.t1 | MTR_2g098070 | 27.885 | 312 | 200 | 8 | 14 | 314 | 55 | 352 | 1.45e-22 | 97.1 |
| MS.gene46072.t1 | MTR_3g025800 | 27.187 | 320 | 185 | 11 | 24 | 312 | 27 | 329 | 4.16e-22 | 95.5 |
| MS.gene46072.t1 | MTR_3g025800 | 23.645 | 203 | 135 | 2 | 130 | 312 | 24 | 226 | 2.50e-13 | 70.1 |
| MS.gene46072.t1 | MTR_7g109135 | 29.289 | 239 | 155 | 6 | 85 | 317 | 1 | 231 | 1.24e-21 | 92.0 |
| MS.gene46072.t1 | MTR_7g117030 | 28.517 | 263 | 163 | 7 | 75 | 319 | 85 | 340 | 1.51e-21 | 94.0 |
| MS.gene46072.t1 | MTR_5g073040 | 26.421 | 299 | 200 | 4 | 25 | 320 | 39 | 320 | 2.59e-21 | 92.8 |
| MS.gene46072.t1 | MTR_4g078545 | 27.653 | 311 | 200 | 8 | 15 | 314 | 65 | 361 | 3.88e-21 | 92.8 |
| MS.gene46072.t1 | MTR_1g087840 | 29.032 | 248 | 161 | 6 | 75 | 316 | 67 | 305 | 7.28e-21 | 91.3 |
| MS.gene46072.t1 | MTR_1g087840 | 28.251 | 223 | 148 | 5 | 3 | 222 | 97 | 310 | 1.82e-12 | 67.4 |
| MS.gene46072.t1 | MTR_1g087840 | 29.167 | 168 | 111 | 3 | 150 | 311 | 35 | 200 | 1.48e-11 | 64.7 |
| MS.gene46072.t1 | MTR_6g091910 | 29.744 | 195 | 120 | 4 | 133 | 314 | 18 | 208 | 1.43e-20 | 88.6 |
| MS.gene46072.t1 | MTR_6g091910 | 27.488 | 211 | 134 | 6 | 23 | 224 | 17 | 217 | 2.91e-18 | 82.4 |
| MS.gene46072.t1 | MTR_7g066690 | 24.038 | 312 | 218 | 7 | 14 | 319 | 6 | 304 | 3.76e-20 | 89.4 |
| MS.gene46072.t1 | MTR_3g090820 | 26.316 | 266 | 168 | 5 | 75 | 319 | 134 | 392 | 7.14e-20 | 89.7 |
| MS.gene46072.t1 | MTR_4g018750 | 25.503 | 298 | 199 | 8 | 30 | 319 | 20 | 302 | 1.26e-19 | 87.8 |
| MS.gene46072.t1 | MTR_8g076760 | 32.323 | 198 | 118 | 5 | 132 | 315 | 111 | 306 | 2.19e-19 | 87.4 |
| MS.gene46072.t1 | MTR_8g076760 | 32.768 | 177 | 113 | 3 | 148 | 320 | 28 | 202 | 1.96e-18 | 84.7 |
| MS.gene46072.t1 | MTR_7g109135 | 29.032 | 217 | 140 | 6 | 107 | 317 | 2 | 210 | 5.99e-19 | 84.3 |
| MS.gene46072.t1 | MTR_7g109135 | 27.225 | 191 | 128 | 4 | 39 | 227 | 38 | 219 | 1.58e-11 | 63.5 |
| MS.gene46072.t1 | MTR_1g090330 | 23.226 | 310 | 208 | 6 | 21 | 317 | 10 | 302 | 6.42e-19 | 85.9 |
| MS.gene46072.t1 | MTR_4g057850 | 24.752 | 303 | 198 | 11 | 13 | 304 | 10 | 293 | 1.01e-18 | 85.5 |
| MS.gene46072.t1 | MTR_4g057850 | 27.957 | 186 | 130 | 4 | 131 | 314 | 19 | 202 | 9.03e-13 | 68.2 |
| MS.gene46072.t1 | MTR_1g097890 | 27.350 | 234 | 156 | 3 | 82 | 315 | 86 | 305 | 1.61e-18 | 84.7 |
| MS.gene46072.t1 | MTR_1g097890 | 28.814 | 177 | 104 | 4 | 135 | 311 | 52 | 206 | 1.42e-14 | 73.6 |
| MS.gene46072.t1 | MTR_6g034515 | 27.148 | 291 | 182 | 8 | 38 | 320 | 80 | 348 | 3.85e-18 | 84.3 |
| MS.gene46072.t1 | MTR_6g034515 | 27.711 | 166 | 110 | 4 | 146 | 311 | 79 | 234 | 3.01e-12 | 67.0 |
| MS.gene46072.t1 | MTR_4g012850 | 29.730 | 185 | 120 | 3 | 26 | 209 | 111 | 286 | 1.36e-16 | 79.3 |
| MS.gene46072.t1 | MTR_4g012850 | 29.891 | 184 | 123 | 4 | 133 | 314 | 15 | 194 | 1.94e-15 | 75.9 |
| MS.gene46072.t1 | MTR_2g102010 | 30.409 | 171 | 111 | 3 | 40 | 209 | 125 | 288 | 6.28e-16 | 77.4 |
| MS.gene46072.t1 | MTR_4g094578 | 27.174 | 184 | 118 | 4 | 132 | 308 | 27 | 201 | 2.05e-15 | 75.9 |
| MS.gene46072.t1 | MTR_3g462140 | 25.246 | 305 | 208 | 6 | 14 | 311 | 4 | 295 | 3.16e-15 | 75.1 |
| MS.gene46072.t1 | MTR_8g092080 | 26.360 | 239 | 154 | 5 | 82 | 316 | 87 | 307 | 7.20e-15 | 74.3 |
| MS.gene46072.t1 | MTR_8g092080 | 25.000 | 220 | 147 | 4 | 1 | 220 | 109 | 310 | 5.62e-13 | 68.9 |
| MS.gene46072.t1 | MTR_8g092080 | 28.261 | 184 | 106 | 4 | 130 | 311 | 48 | 207 | 2.97e-12 | 66.6 |
| MS.gene46072.t1 | MTR_7g015870 | 24.125 | 257 | 175 | 6 | 73 | 315 | 65 | 315 | 7.53e-15 | 74.3 |
| MS.gene46072.t1 | MTR_1g088995 | 24.211 | 285 | 201 | 6 | 29 | 313 | 37 | 306 | 3.10e-14 | 72.4 |
| MS.gene46072.t1 | MTR_1g088995 | 30.102 | 196 | 115 | 8 | 24 | 214 | 128 | 306 | 1.44e-11 | 64.7 |
| MS.gene46072.t1 | MTR_1g088995 | 26.316 | 209 | 122 | 8 | 120 | 314 | 19 | 209 | 9.84e-11 | 62.0 |
| MS.gene46072.t1 | MTR_6g015860 | 22.148 | 298 | 204 | 6 | 31 | 313 | 21 | 305 | 3.39e-14 | 72.4 |
| MS.gene46072.t1 | MTR_7g015870 | 23.735 | 257 | 176 | 6 | 73 | 315 | 61 | 311 | 4.88e-14 | 72.0 |
| MS.gene46072.t1 | MTR_5g030530 | 26.131 | 199 | 134 | 4 | 129 | 315 | 3 | 200 | 4.98e-14 | 71.6 |
| MS.gene46072.t1 | MTR_6g033280 | 27.907 | 172 | 112 | 5 | 147 | 314 | 76 | 239 | 1.31e-13 | 71.2 |
| MS.gene46072.t1 | MTR_8g019480 | 25.342 | 292 | 179 | 7 | 63 | 318 | 60 | 348 | 1.33e-13 | 70.9 |
| MS.gene46072.t1 | MTR_4g018750 | 25.106 | 235 | 160 | 6 | 27 | 253 | 17 | 243 | 1.88e-13 | 70.1 |
| MS.gene46072.t1 | MTR_8g066975 | 27.835 | 194 | 129 | 4 | 129 | 311 | 3 | 196 | 6.18e-13 | 68.6 |
| MS.gene46072.t1 | MTR_8g066975 | 24.759 | 311 | 204 | 10 | 19 | 314 | 1 | 296 | 4.62e-11 | 63.2 |
| MS.gene46072.t1 | MTR_5g081910 | 25.180 | 278 | 167 | 9 | 75 | 316 | 53 | 325 | 2.48e-12 | 67.0 |
| MS.gene46072.t1 | MTR_3g100570 | 22.257 | 319 | 217 | 9 | 22 | 317 | 3 | 313 | 3.50e-12 | 66.6 |
| MS.gene46072.t1 | MTR_8g099910 | 27.322 | 183 | 117 | 6 | 136 | 314 | 79 | 249 | 3.58e-12 | 66.6 |
| MS.gene46072.t1 | MTR_2g032610 | 31.818 | 154 | 94 | 6 | 143 | 288 | 37 | 187 | 8.22e-12 | 65.5 |
| MS.gene46072.t1 | MTR_2g032610 | 22.414 | 290 | 195 | 7 | 47 | 312 | 34 | 317 | 4.06e-11 | 63.5 |
| MS.gene46072.t1 | MTR_3g090820 | 25.123 | 203 | 126 | 4 | 75 | 256 | 134 | 331 | 3.51e-11 | 63.5 |
| MS.gene46072.t1 | MTR_5g032420 | 21.818 | 330 | 214 | 7 | 22 | 317 | 3 | 322 | 4.48e-11 | 63.2 |
| MS.gene46072.t1 | MTR_1g088995 | 26.316 | 209 | 122 | 8 | 120 | 314 | 19 | 209 | 5.22e-11 | 62.0 |
| MS.gene46072.t1 | MTR_8g076690 | 29.016 | 193 | 104 | 6 | 135 | 310 | 17 | 193 | 5.89e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46072.t1 | AT3G53940 | 71.246 | 313 | 84 | 3 | 6 | 316 | 54 | 362 | 4.76e-165 | 464 |
| MS.gene46072.t1 | AT3G53940 | 30.457 | 197 | 121 | 4 | 134 | 318 | 73 | 265 | 4.42e-17 | 81.3 |
| MS.gene46072.t1 | AT3G55640 | 70.227 | 309 | 88 | 2 | 4 | 311 | 17 | 322 | 2.02e-156 | 441 |
| MS.gene46072.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 5.95e-16 | 77.8 |
| MS.gene46072.t1 | AT3G55640 | 27.000 | 200 | 124 | 4 | 24 | 217 | 144 | 327 | 1.49e-14 | 73.6 |
| MS.gene46072.t1 | AT3G55640 | 70.227 | 309 | 88 | 2 | 4 | 311 | 17 | 322 | 2.02e-156 | 441 |
| MS.gene46072.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 5.95e-16 | 77.8 |
| MS.gene46072.t1 | AT3G55640 | 27.000 | 200 | 124 | 4 | 24 | 217 | 144 | 327 | 1.49e-14 | 73.6 |
| MS.gene46072.t1 | AT2G37890 | 62.236 | 331 | 107 | 4 | 1 | 316 | 7 | 334 | 1.71e-147 | 418 |
| MS.gene46072.t1 | AT2G37890 | 29.302 | 215 | 136 | 3 | 116 | 318 | 27 | 237 | 2.86e-18 | 84.3 |
| MS.gene46072.t1 | AT3G53940 | 67.647 | 238 | 71 | 3 | 6 | 241 | 54 | 287 | 1.03e-114 | 333 |
| MS.gene46072.t1 | AT3G53940 | 30.457 | 197 | 121 | 4 | 134 | 318 | 73 | 265 | 1.15e-17 | 82.0 |
| MS.gene46072.t1 | AT3G55640 | 67.364 | 239 | 74 | 2 | 4 | 241 | 17 | 252 | 3.89e-113 | 328 |
| MS.gene46072.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 2.19e-16 | 77.8 |
| MS.gene46072.t1 | AT3G55640 | 67.364 | 239 | 74 | 2 | 4 | 241 | 17 | 252 | 3.89e-113 | 328 |
| MS.gene46072.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 2.19e-16 | 77.8 |
| MS.gene46072.t1 | AT4G01100 | 35.484 | 310 | 173 | 7 | 25 | 314 | 42 | 344 | 2.82e-55 | 184 |
| MS.gene46072.t1 | AT4G01100 | 34.877 | 324 | 170 | 9 | 25 | 314 | 42 | 358 | 1.68e-54 | 182 |
| MS.gene46072.t1 | AT5G51050 | 36.677 | 319 | 166 | 9 | 7 | 315 | 204 | 496 | 4.46e-52 | 179 |
| MS.gene46072.t1 | AT5G51050 | 30.319 | 188 | 123 | 3 | 133 | 317 | 222 | 404 | 2.61e-18 | 85.9 |
| MS.gene46072.t1 | AT4G01100 | 34.783 | 299 | 168 | 7 | 36 | 314 | 3 | 294 | 1.10e-51 | 173 |
| MS.gene46072.t1 | AT4G32400 | 35.932 | 295 | 169 | 8 | 21 | 314 | 110 | 385 | 1.09e-46 | 162 |
| MS.gene46072.t1 | AT4G32400 | 29.412 | 204 | 119 | 5 | 15 | 212 | 198 | 382 | 6.55e-17 | 81.3 |
| MS.gene46072.t1 | AT4G32400 | 24.000 | 200 | 141 | 3 | 123 | 320 | 103 | 293 | 5.51e-14 | 72.4 |
| MS.gene46072.t1 | AT3G51870 | 33.798 | 287 | 166 | 7 | 36 | 320 | 102 | 366 | 1.79e-46 | 161 |
| MS.gene46072.t1 | AT4G26180 | 33.660 | 306 | 168 | 7 | 23 | 311 | 19 | 306 | 1.16e-45 | 158 |
| MS.gene46072.t1 | AT5G61810 | 32.268 | 313 | 183 | 6 | 7 | 315 | 46 | 333 | 1.37e-45 | 158 |
| MS.gene46072.t1 | AT5G61810 | 32.268 | 313 | 183 | 6 | 7 | 315 | 189 | 476 | 5.18e-44 | 157 |
| MS.gene46072.t1 | AT1G14560 | 33.000 | 300 | 163 | 8 | 36 | 314 | 38 | 320 | 1.81e-42 | 149 |
| MS.gene46072.t1 | AT1G14560 | 27.358 | 212 | 131 | 7 | 20 | 216 | 118 | 321 | 6.49e-16 | 77.8 |
| MS.gene46072.t1 | AT5G01500 | 31.690 | 284 | 172 | 6 | 36 | 318 | 130 | 392 | 5.99e-41 | 147 |
| MS.gene46072.t1 | AT3G21390 | 32.258 | 310 | 176 | 8 | 27 | 308 | 21 | 324 | 6.16e-41 | 145 |
| MS.gene46072.t1 | AT3G21390 | 26.368 | 201 | 128 | 4 | 136 | 320 | 21 | 217 | 6.65e-16 | 77.8 |
| MS.gene46072.t1 | AT4G26180 | 32.990 | 291 | 160 | 7 | 23 | 296 | 19 | 291 | 8.27e-41 | 144 |
| MS.gene46072.t1 | AT4G26180 | 29.630 | 189 | 123 | 2 | 133 | 311 | 20 | 208 | 1.41e-22 | 95.9 |
| MS.gene46072.t1 | AT3G21390 | 32.258 | 310 | 176 | 8 | 27 | 308 | 43 | 346 | 9.35e-41 | 145 |
| MS.gene46072.t1 | AT3G21390 | 26.368 | 201 | 128 | 4 | 136 | 320 | 43 | 239 | 8.08e-16 | 77.8 |
| MS.gene46072.t1 | AT5G64970 | 31.193 | 327 | 183 | 6 | 8 | 314 | 118 | 422 | 2.15e-39 | 144 |
| MS.gene46072.t1 | AT5G48970 | 31.546 | 317 | 186 | 10 | 27 | 316 | 24 | 336 | 2.66e-39 | 141 |
| MS.gene46072.t1 | AT5G07320 | 31.449 | 283 | 160 | 7 | 36 | 312 | 220 | 474 | 1.08e-38 | 143 |
| MS.gene46072.t1 | AT5G07320 | 31.792 | 173 | 109 | 4 | 146 | 317 | 221 | 385 | 3.32e-18 | 85.5 |
| MS.gene46072.t1 | AT5G07320 | 27.941 | 204 | 131 | 4 | 11 | 213 | 286 | 474 | 3.64e-18 | 85.1 |
| MS.gene46072.t1 | AT5G64970 | 30.844 | 308 | 171 | 6 | 28 | 315 | 14 | 299 | 2.50e-36 | 132 |
| MS.gene46072.t1 | AT1G14560 | 32.270 | 282 | 153 | 8 | 36 | 296 | 38 | 302 | 3.26e-36 | 132 |
| MS.gene46072.t1 | AT1G14560 | 29.775 | 178 | 113 | 4 | 146 | 311 | 39 | 216 | 2.03e-16 | 79.0 |
| MS.gene46072.t1 | AT5G64970 | 31.068 | 309 | 171 | 6 | 8 | 296 | 118 | 404 | 1.13e-34 | 130 |
| MS.gene46072.t1 | AT5G48970 | 31.599 | 269 | 159 | 8 | 69 | 316 | 1 | 265 | 1.31e-33 | 124 |
| MS.gene46072.t1 | AT5G56450 | 30.293 | 307 | 186 | 10 | 24 | 315 | 33 | 326 | 7.53e-33 | 124 |
| MS.gene46072.t1 | AT1G14560 | 34.783 | 230 | 120 | 7 | 106 | 314 | 2 | 222 | 1.54e-31 | 118 |
| MS.gene46072.t1 | AT1G14560 | 26.887 | 212 | 132 | 6 | 20 | 216 | 20 | 223 | 1.88e-16 | 77.8 |
| MS.gene46072.t1 | AT1G78180 | 30.284 | 317 | 179 | 8 | 19 | 315 | 122 | 416 | 4.22e-30 | 118 |
| MS.gene46072.t1 | AT1G25380 | 30.279 | 251 | 155 | 6 | 69 | 310 | 63 | 302 | 7.97e-29 | 114 |
| MS.gene46072.t1 | AT1G25380 | 25.000 | 220 | 152 | 5 | 9 | 224 | 105 | 315 | 9.25e-12 | 65.5 |
| MS.gene46072.t1 | AT1G25380 | 30.279 | 251 | 155 | 6 | 69 | 310 | 63 | 302 | 7.97e-29 | 114 |
| MS.gene46072.t1 | AT1G25380 | 25.000 | 220 | 152 | 5 | 9 | 224 | 105 | 315 | 9.25e-12 | 65.5 |
| MS.gene46072.t1 | AT3G20240 | 24.759 | 311 | 204 | 5 | 24 | 320 | 51 | 345 | 4.48e-28 | 112 |
| MS.gene46072.t1 | AT4G27940 | 28.788 | 264 | 163 | 6 | 75 | 319 | 155 | 412 | 1.65e-24 | 103 |
| MS.gene46072.t1 | AT4G11440 | 27.458 | 295 | 188 | 6 | 26 | 315 | 331 | 604 | 9.57e-24 | 102 |
| MS.gene46072.t1 | AT4G11440 | 27.458 | 295 | 188 | 6 | 26 | 315 | 331 | 604 | 9.57e-24 | 102 |
| MS.gene46072.t1 | AT4G28390 | 28.155 | 309 | 197 | 8 | 14 | 311 | 72 | 366 | 1.03e-23 | 100 |
| MS.gene46072.t1 | AT4G28390 | 28.155 | 309 | 197 | 8 | 14 | 311 | 72 | 366 | 1.03e-23 | 100 |
| MS.gene46072.t1 | AT3G08580 | 27.740 | 292 | 186 | 7 | 24 | 303 | 83 | 361 | 1.94e-23 | 99.8 |
| MS.gene46072.t1 | AT3G08580 | 27.740 | 292 | 186 | 7 | 24 | 303 | 83 | 361 | 1.94e-23 | 99.8 |
| MS.gene46072.t1 | AT2G30160 | 25.559 | 313 | 209 | 5 | 11 | 316 | 28 | 323 | 2.28e-23 | 98.6 |
| MS.gene46072.t1 | AT5G13490 | 27.055 | 292 | 188 | 7 | 24 | 303 | 87 | 365 | 1.66e-22 | 97.1 |
| MS.gene46072.t1 | AT5G13490 | 27.055 | 292 | 188 | 7 | 24 | 303 | 87 | 365 | 1.66e-22 | 97.1 |
| MS.gene46072.t1 | AT1G07030 | 27.815 | 302 | 187 | 7 | 25 | 317 | 40 | 319 | 2.64e-22 | 95.5 |
| MS.gene46072.t1 | AT1G07030 | 30.769 | 156 | 102 | 2 | 74 | 225 | 173 | 326 | 1.96e-12 | 67.4 |
| MS.gene46072.t1 | AT1G34065 | 30.279 | 251 | 151 | 5 | 77 | 320 | 101 | 334 | 1.02e-21 | 94.4 |
| MS.gene46072.t1 | AT1G34065 | 29.891 | 184 | 103 | 3 | 130 | 311 | 71 | 230 | 5.52e-16 | 77.8 |
| MS.gene46072.t1 | AT1G34065 | 26.126 | 222 | 138 | 5 | 8 | 225 | 139 | 338 | 1.16e-12 | 68.2 |
| MS.gene46072.t1 | AT1G34065 | 30.279 | 251 | 151 | 5 | 77 | 320 | 108 | 341 | 1.14e-21 | 94.4 |
| MS.gene46072.t1 | AT1G34065 | 29.891 | 184 | 103 | 3 | 130 | 311 | 78 | 237 | 5.41e-16 | 78.2 |
| MS.gene46072.t1 | AT1G34065 | 26.126 | 222 | 138 | 5 | 8 | 225 | 146 | 345 | 1.40e-12 | 68.2 |
| MS.gene46072.t1 | AT2G47490 | 27.083 | 288 | 190 | 9 | 37 | 317 | 29 | 303 | 2.16e-20 | 90.1 |
| MS.gene46072.t1 | AT2G47490 | 29.082 | 196 | 118 | 6 | 39 | 227 | 131 | 312 | 6.81e-12 | 65.9 |
| MS.gene46072.t1 | AT5G17400 | 27.336 | 289 | 192 | 7 | 23 | 303 | 12 | 290 | 3.76e-20 | 89.4 |
| MS.gene46072.t1 | AT5G01340 | 23.718 | 312 | 209 | 10 | 13 | 313 | 5 | 298 | 1.23e-18 | 85.1 |
| MS.gene46072.t1 | AT1G74240 | 27.215 | 316 | 187 | 11 | 24 | 312 | 35 | 334 | 3.80e-18 | 84.3 |
| MS.gene46072.t1 | AT1G74240 | 24.020 | 204 | 135 | 3 | 130 | 313 | 32 | 235 | 4.44e-12 | 66.6 |
| MS.gene46072.t1 | AT2G46320 | 26.792 | 265 | 163 | 7 | 75 | 320 | 109 | 361 | 4.08e-18 | 84.3 |
| MS.gene46072.t1 | AT3G54110 | 24.913 | 289 | 196 | 7 | 31 | 312 | 21 | 295 | 7.25e-18 | 82.8 |
| MS.gene46072.t1 | AT1G14140 | 24.290 | 317 | 209 | 10 | 8 | 313 | 3 | 299 | 8.45e-18 | 82.8 |
| MS.gene46072.t1 | AT1G14140 | 38.554 | 83 | 51 | 0 | 232 | 314 | 19 | 101 | 9.61e-11 | 62.4 |
| MS.gene46072.t1 | AT5G66380 | 29.500 | 200 | 134 | 4 | 126 | 320 | 2 | 199 | 7.25e-17 | 80.1 |
| MS.gene46072.t1 | AT5G66380 | 31.068 | 206 | 116 | 7 | 132 | 319 | 108 | 305 | 1.88e-16 | 79.0 |
| MS.gene46072.t1 | AT2G46320 | 26.820 | 261 | 160 | 7 | 79 | 320 | 14 | 262 | 7.70e-17 | 79.3 |
| MS.gene46072.t1 | AT2G46320 | 26.820 | 261 | 160 | 7 | 79 | 320 | 14 | 262 | 7.70e-17 | 79.3 |
| MS.gene46072.t1 | AT2G46320 | 26.820 | 261 | 160 | 7 | 79 | 320 | 14 | 262 | 7.70e-17 | 79.3 |
| MS.gene46072.t1 | AT5G58970 | 23.701 | 308 | 204 | 7 | 18 | 313 | 9 | 297 | 3.44e-16 | 78.2 |
| MS.gene46072.t1 | AT4G03115 | 21.975 | 314 | 222 | 7 | 4 | 313 | 14 | 308 | 6.05e-15 | 74.7 |
| MS.gene46072.t1 | AT1G79900 | 28.934 | 197 | 120 | 6 | 28 | 221 | 112 | 291 | 8.30e-15 | 73.9 |
| MS.gene46072.t1 | AT4G03115 | 21.975 | 314 | 222 | 7 | 4 | 313 | 46 | 340 | 8.31e-15 | 74.7 |
| MS.gene46072.t1 | AT4G39460 | 30.055 | 183 | 102 | 3 | 130 | 310 | 54 | 212 | 1.98e-14 | 73.2 |
| MS.gene46072.t1 | AT4G39460 | 27.311 | 238 | 151 | 6 | 82 | 315 | 93 | 312 | 4.08e-14 | 72.4 |
| MS.gene46072.t1 | AT4G39460 | 26.147 | 218 | 135 | 6 | 8 | 221 | 122 | 317 | 6.86e-14 | 71.6 |
| MS.gene46072.t1 | AT4G39460 | 30.055 | 183 | 102 | 3 | 130 | 310 | 54 | 212 | 1.98e-14 | 73.2 |
| MS.gene46072.t1 | AT4G39460 | 27.311 | 238 | 151 | 6 | 82 | 315 | 93 | 312 | 4.08e-14 | 72.4 |
| MS.gene46072.t1 | AT4G39460 | 26.147 | 218 | 135 | 6 | 8 | 221 | 122 | 317 | 6.86e-14 | 71.6 |
| MS.gene46072.t1 | AT4G39460 | 30.055 | 183 | 102 | 3 | 130 | 310 | 54 | 212 | 1.98e-14 | 73.2 |
| MS.gene46072.t1 | AT4G39460 | 27.311 | 238 | 151 | 6 | 82 | 315 | 93 | 312 | 4.08e-14 | 72.4 |
| MS.gene46072.t1 | AT4G39460 | 26.147 | 218 | 135 | 6 | 8 | 221 | 122 | 317 | 6.86e-14 | 71.6 |
| MS.gene46072.t1 | AT5G42130 | 26.190 | 252 | 169 | 5 | 75 | 320 | 160 | 400 | 2.04e-14 | 73.9 |
| MS.gene46072.t1 | AT2G17270 | 25.000 | 172 | 121 | 2 | 137 | 308 | 25 | 188 | 2.38e-14 | 72.8 |
| MS.gene46072.t1 | AT1G74240 | 26.277 | 274 | 164 | 9 | 66 | 312 | 24 | 286 | 6.40e-14 | 71.6 |
| MS.gene46072.t1 | AT3G48850 | 27.717 | 184 | 121 | 4 | 135 | 314 | 72 | 247 | 6.51e-14 | 72.0 |
| MS.gene46072.t1 | AT5G46800 | 26.136 | 264 | 168 | 7 | 67 | 314 | 47 | 299 | 9.69e-14 | 70.9 |
| MS.gene46072.t1 | AT5G46800 | 26.136 | 264 | 168 | 7 | 67 | 314 | 47 | 299 | 9.69e-14 | 70.9 |
| MS.gene46072.t1 | AT5G46800 | 26.136 | 264 | 168 | 7 | 67 | 314 | 47 | 299 | 9.69e-14 | 70.9 |
| MS.gene46072.t1 | AT4G03115 | 21.339 | 239 | 176 | 3 | 75 | 313 | 19 | 245 | 2.36e-13 | 69.3 |
| MS.gene46072.t1 | AT4G03115 | 24.742 | 194 | 125 | 3 | 24 | 214 | 70 | 245 | 3.42e-11 | 62.8 |
| MS.gene46072.t1 | AT4G03115 | 21.339 | 239 | 176 | 3 | 75 | 313 | 11 | 237 | 2.37e-13 | 68.9 |
| MS.gene46072.t1 | AT4G03115 | 24.742 | 194 | 125 | 3 | 24 | 214 | 62 | 237 | 3.28e-11 | 62.8 |
| MS.gene46072.t1 | AT5G26200 | 24.627 | 268 | 172 | 7 | 76 | 318 | 79 | 341 | 3.24e-13 | 69.7 |
| MS.gene46072.t1 | AT5G15640 | 24.809 | 262 | 159 | 9 | 76 | 313 | 71 | 318 | 1.06e-12 | 68.2 |
| MS.gene46072.t1 | AT2G35800 | 23.129 | 294 | 197 | 6 | 26 | 319 | 546 | 810 | 1.09e-12 | 69.3 |
| MS.gene46072.t1 | AT5G15640 | 27.273 | 198 | 120 | 7 | 135 | 313 | 119 | 311 | 1.21e-12 | 67.8 |
| MS.gene46072.t1 | AT2G33820 | 24.468 | 188 | 134 | 4 | 131 | 311 | 15 | 201 | 1.34e-12 | 67.8 |
| MS.gene46072.t1 | AT2G33820 | 24.468 | 188 | 134 | 4 | 131 | 311 | 15 | 201 | 1.56e-12 | 67.0 |
| MS.gene46072.t1 | AT2G22500 | 23.975 | 317 | 202 | 11 | 28 | 318 | 9 | 312 | 5.28e-12 | 65.9 |
| MS.gene46072.t1 | AT2G26360 | 23.529 | 289 | 193 | 6 | 26 | 314 | 116 | 376 | 6.79e-12 | 66.2 |
| MS.gene46072.t1 | AT5G14040 | 27.749 | 191 | 122 | 5 | 131 | 317 | 83 | 261 | 1.05e-11 | 65.5 |
| MS.gene46072.t1 | AT2G46320 | 26.697 | 221 | 131 | 7 | 79 | 280 | 14 | 222 | 1.50e-11 | 63.5 |
| MS.gene46072.t1 | AT5G09470 | 24.747 | 198 | 140 | 3 | 22 | 219 | 148 | 336 | 4.54e-11 | 63.5 |
| MS.gene46072.t1 | AT2G33820 | 23.469 | 196 | 134 | 5 | 131 | 311 | 15 | 209 | 7.98e-11 | 62.4 |
Find 72 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGCTATTGCATTCTGTTC+TGG | 0.145852 | 7.2:-42484579 | MS.gene46072:intron |
| CTTGCTTGTGGAAGTCTTTC+GGG | 0.161989 | 7.2:-42483826 | MS.gene46072:CDS |
| AAGAAGGATTTAGAGCATTT+TGG | 0.183919 | 7.2:-42484778 | MS.gene46072:CDS |
| GGTGGTTTGGCTGGTGCTTT+TGG | 0.222835 | 7.2:-42486724 | MS.gene46072:CDS |
| TAGAAATTGACTGCAGAATA+AGG | 0.230373 | 7.2:+42484722 | None:intergenic |
| TCTTGCTTGTGGAAGTCTTT+CGG | 0.252979 | 7.2:-42483827 | MS.gene46072:CDS |
| TGCAGAGATGAAGGATTCTT+TGG | 0.285844 | 7.2:-42484196 | MS.gene46072:CDS |
| CAGCTATTGCATTCTGTTCT+GGG | 0.287641 | 7.2:-42484578 | MS.gene46072:CDS |
| AGGAGAAGGATGCAGTTAGA+AGG | 0.306144 | 7.2:-42483203 | MS.gene46072:CDS |
| GTCTATAACACCAGTTTGTT+CGG | 0.316408 | 7.2:-42483161 | MS.gene46072:CDS |
| TACTAAATCCAAAGGATATA+AGG | 0.336341 | 7.2:+42484472 | None:intergenic |
| TTTGTCAGTGGTGGTTTGTC+AGG | 0.352435 | 7.2:-42484512 | MS.gene46072:CDS |
| ACCAGTTTGTTCGGGACATT+TGG | 0.356764 | 7.2:-42483152 | MS.gene46072:CDS |
| CATTTCCATTGGATCTTGTA+AGG | 0.360450 | 7.2:-42483223 | MS.gene46072:CDS |
| TGCCTCGGCCTTATATCCTT+TGG | 0.364990 | 7.2:-42484480 | MS.gene46072:CDS |
| TTTATTTGGTACAGGGTGTT+GGG | 0.368968 | 7.2:-42484054 | MS.gene46072:intron |
| CTTTATTTGGTACAGGGTGT+TGG | 0.407611 | 7.2:-42484055 | MS.gene46072:intron |
| GGAGAAGGATGCAGTTAGAA+GGG | 0.415785 | 7.2:-42483202 | MS.gene46072:CDS |
| GAGTACTACAAGGTTGTTCC+CGG | 0.420365 | 7.2:-42483077 | MS.gene46072:CDS |
| TCGGGCATTGTATCAGCAAC+AGG | 0.423302 | 7.2:-42483808 | MS.gene46072:intron |
| TCTATAACACCAGTTTGTTC+GGG | 0.440219 | 7.2:-42483160 | MS.gene46072:CDS |
| GGTCACATATTTCGTAATGA+AGG | 0.441576 | 7.2:-42483131 | MS.gene46072:CDS |
| ACCACAATTTGCAGAGATGA+AGG | 0.444778 | 7.2:-42484205 | MS.gene46072:CDS |
| AATAATCAACAATCACAGAT+TGG | 0.462372 | 7.2:-42486769 | MS.gene46072:CDS |
| CATTGGATCTTGTAAGGAGA+AGG | 0.474022 | 7.2:-42483217 | MS.gene46072:CDS |
| TACGTTGAGCCTCGTACAAA+AGG | 0.474022 | 7.2:+42484810 | None:intergenic |
| TTTGGAATGTACAAGGGACT+TGG | 0.480495 | 7.2:-42484178 | MS.gene46072:CDS |
| ACCATAGCATTTGAATCATC+CGG | 0.481287 | 7.2:+42483853 | None:intergenic |
| CAACGTATTGTCAAAGAAGA+AGG | 0.485056 | 7.2:-42484794 | MS.gene46072:CDS |
| GTCACATATTTCGTAATGAA+GGG | 0.495694 | 7.2:-42483130 | MS.gene46072:CDS |
| GACTTTGATAGCTGGAAAGA+AGG | 0.498891 | 7.2:+42483015 | None:intergenic |
| TGCAAATTGTGGTAAAAGCA+TGG | 0.499020 | 7.2:+42484215 | None:intergenic |
| ACTCGCAGCAACATTTCCAT+TGG | 0.506341 | 7.2:-42483234 | MS.gene46072:intron |
| AGCTATTGCATTCTGTTCTG+GGG | 0.509006 | 7.2:-42484577 | MS.gene46072:CDS |
| TACAAGGTTGTTCCCGGCGT+CGG | 0.515767 | 7.2:-42483071 | MS.gene46072:CDS |
| GGGATACGAGGTTTGTATAG+AGG | 0.518603 | 7.2:-42483110 | MS.gene46072:CDS |
| CTTCTCCTTACAAGATCCAA+TGG | 0.520081 | 7.2:+42483218 | None:intergenic |
| AGAAATTGACTGCAGAATAA+GGG | 0.520568 | 7.2:+42484723 | None:intergenic |
| ACCAAATGTCCCGAACAAAC+TGG | 0.525065 | 7.2:+42483151 | None:intergenic |
| AGGATTCTTTGGAATGTACA+AGG | 0.526697 | 7.2:-42484185 | MS.gene46072:CDS |
| CTGCTAACGACTTTGATAGC+TGG | 0.529004 | 7.2:+42483007 | None:intergenic |
| AGAATGGGAACGGTGGTTGA+AGG | 0.534250 | 7.2:-42486808 | MS.gene46072:CDS |
| AAGAACACGACTTGCAGCAC+AGG | 0.536771 | 7.2:-42484450 | MS.gene46072:intron |
| GCCGGATGATTCAAATGCTA+TGG | 0.537566 | 7.2:-42483854 | MS.gene46072:CDS |
| GTCAGGTATGACAGCTGCCT+CGG | 0.538131 | 7.2:-42484495 | MS.gene46072:CDS |
| GGGACTTGGTGCAACGTTGT+TGG | 0.541280 | 7.2:-42484164 | MS.gene46072:intron |
| GAGAAGGATGCAGTTAGAAG+GGG | 0.566504 | 7.2:-42483201 | MS.gene46072:CDS |
| GGGAACAACCTTGTAGTACT+CGG | 0.569629 | 7.2:+42483079 | None:intergenic |
| GCAAATTGTGGTAAAAGCAT+GGG | 0.570098 | 7.2:+42484216 | None:intergenic |
| TCCTTCATCTCTGCAAATTG+TGG | 0.571747 | 7.2:+42484204 | None:intergenic |
| AGAACGCAAGCTCTCGTAAG+CGG | 0.572360 | 7.2:+42484009 | None:intergenic |
| GAGAAATGTCATATACTACA+AGG | 0.573100 | 7.2:-42484245 | MS.gene46072:CDS |
| AGGATGCAGTTAGAAGGGGT+TGG | 0.575508 | 7.2:-42483197 | MS.gene46072:CDS |
| CGTGTTCTTACTAAATCCAA+AGG | 0.576341 | 7.2:+42484464 | None:intergenic |
| GCTATTGCATTCTGTTCTGG+GGG | 0.579315 | 7.2:-42484576 | MS.gene46072:CDS |
| ATGCAGTTAGAAGGGGTTGG+TGG | 0.587387 | 7.2:-42483194 | MS.gene46072:CDS |
| ACTTTGATAGCTGGAAAGAA+GGG | 0.587563 | 7.2:+42483016 | None:intergenic |
| TCTTAACTTTATCAGGTGCA+AGG | 0.588477 | 7.2:-42484878 | MS.gene46072:intron |
| AGAATGGTGAGTCTAGAAAG+AGG | 0.588606 | 7.2:+42486685 | None:intergenic |
| GTCTTTGTGCACTTTGTCAG+TGG | 0.597276 | 7.2:-42484524 | MS.gene46072:CDS |
| TCTTGCTCAGTGCTGTGACA+TGG | 0.598701 | 7.2:+42484837 | None:intergenic |
| TTTGTGCACTTTGTCAGTGG+TGG | 0.601534 | 7.2:-42484521 | MS.gene46072:CDS |
| GGAACAACCTTGTAGTACTC+GGG | 0.601730 | 7.2:+42483080 | None:intergenic |
| GAGAATCATAGAGCAAAGGC+TGG | 0.603864 | 7.2:-42484554 | MS.gene46072:CDS |
| ATCCAAAGGATATAAGGCCG+AGG | 0.606885 | 7.2:+42484478 | None:intergenic |
| GAGAAACTTAAAGCTATGCA+AGG | 0.615073 | 7.2:+42484031 | None:intergenic |
| GCGGTGTGTGAGAATGGGAA+CGG | 0.634844 | 7.2:-42486818 | None:intergenic |
| GCTATGGTCAGTCTTGCTTG+TGG | 0.645026 | 7.2:-42483838 | MS.gene46072:CDS |
| TTTCGTAATGAAGGGATACG+AGG | 0.650259 | 7.2:-42483122 | MS.gene46072:CDS |
| GGATTCTTTGGAATGTACAA+GGG | 0.652394 | 7.2:-42484184 | MS.gene46072:CDS |
| AGAAATGTCATATACTACAA+GGG | 0.672751 | 7.2:-42484244 | MS.gene46072:CDS |
| GTGTGTGAGAATGGGAACGG+TGG | 0.688037 | 7.2:-42486815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTGTTTGATATTTATAT+GGG | - | chr7.2:42484448-42484467 | MS.gene46072:intron | 10.0% |
| !! | TTTATTGTTTGATATTTATA+TGG | - | chr7.2:42484447-42484466 | MS.gene46072:intron | 10.0% |
| !!! | TACATTTTAGTATTATAAAA+TGG | + | chr7.2:42484802-42484821 | None:intergenic | 10.0% |
| !!! | TTTCAATTTATTTCATTTTT+TGG | + | chr7.2:42483540-42483559 | None:intergenic | 10.0% |
| !! | AAAATTCCATTTCTATATTA+TGG | - | chr7.2:42484370-42484389 | MS.gene46072:intron | 15.0% |
| !! | AATTACAAGAAAAGAATAAA+AGG | + | chr7.2:42483167-42483186 | None:intergenic | 15.0% |
| !! | AATTTATCTGAATAACTTAT+GGG | - | chr7.2:42484914-42484933 | MS.gene46072:intron | 15.0% |
| !! | ATATTACTACATACTTTATT+TGG | - | chr7.2:42485747-42485766 | MS.gene46072:intron | 15.0% |
| !!! | CTATTTTTATTTTTTGATTC+AGG | - | chr7.2:42485939-42485958 | MS.gene46072:intron | 15.0% |
| !!! | TATGGTTTTGTAAATAATTA+CGG | - | chr7.2:42485915-42485934 | MS.gene46072:intron | 15.0% |
| !!! | TGAATTTGATAACAAATTTT+AGG | - | chr7.2:42483643-42483662 | MS.gene46072:intron | 15.0% |
| !!! | TGATTTTATCATATTATTAG+CGG | + | chr7.2:42484047-42484066 | None:intergenic | 15.0% |
| !!! | TTTAAGTGATGTTTAATTTT+AGG | - | chr7.2:42483853-42483872 | MS.gene46072:CDS | 15.0% |
| !! | AATATGCAGTAAACAATATA+AGG | - | chr7.2:42484240-42484259 | MS.gene46072:CDS | 20.0% |
| !! | ATACTAAAATGTAATGTAAC+TGG | - | chr7.2:42484809-42484828 | MS.gene46072:CDS | 20.0% |
| !! | GAAAAAATATACTTACAAAC+AGG | + | chr7.2:42485514-42485533 | None:intergenic | 20.0% |
| !! | GAATAACCATAATATAGAAA+TGG | + | chr7.2:42484379-42484398 | None:intergenic | 20.0% |
| !! | GAATTTATCTGAATAACTTA+TGG | - | chr7.2:42484913-42484932 | MS.gene46072:intron | 20.0% |
| !! | TACTAAAATGTAATGTAACT+GGG | - | chr7.2:42484810-42484829 | MS.gene46072:CDS | 20.0% |
| !! | TATATTGTTTACTGCATATT+TGG | + | chr7.2:42484240-42484259 | None:intergenic | 20.0% |
| !! | TATTTAATGCATACCATTAA+GGG | + | chr7.2:42485434-42485453 | None:intergenic | 20.0% |
| !! | TTAAATAATAAGCAATGTCT+TGG | - | chr7.2:42485447-42485466 | MS.gene46072:intron | 20.0% |
| !! | TTATTTAATGCATACCATTA+AGG | + | chr7.2:42485435-42485454 | None:intergenic | 20.0% |
| !!! | ATAACAAATTTTAGGTTGAA+AGG | - | chr7.2:42483651-42483670 | MS.gene46072:intron | 20.0% |
| !!! | TCTATTTGATTTCAATCAAT+AGG | - | chr7.2:42484510-42484529 | MS.gene46072:CDS | 20.0% |
| ! | AAAATTCAACCAACAAAAAG+TGG | + | chr7.2:42485397-42485416 | None:intergenic | 25.0% |
| ! | AATAATCAACAATCACAGAT+TGG | - | chr7.2:42483046-42483065 | MS.gene46072:CDS | 25.0% |
| ! | AGAAATGTCATATACTACAA+GGG | - | chr7.2:42485571-42485590 | MS.gene46072:intron | 25.0% |
| ! | ATATTTGGATTCAACCTATT+TGG | + | chr7.2:42484225-42484244 | None:intergenic | 25.0% |
| ! | ATGAGATCAATTCAAACTTA+AGG | + | chr7.2:42485199-42485218 | None:intergenic | 25.0% |
| ! | CAAAATAAAGAAGCAATAAG+AGG | + | chr7.2:42485704-42485723 | None:intergenic | 25.0% |
| ! | CTATATTATGGTTATTCTGA+AGG | - | chr7.2:42484382-42484401 | MS.gene46072:intron | 25.0% |
| ! | GTAAGTACAATTTAGTTAGA+TGG | - | chr7.2:42483416-42483435 | MS.gene46072:intron | 25.0% |
| ! | TAAGTTCAATGATTCACAAT+AGG | - | chr7.2:42484299-42484318 | MS.gene46072:intron | 25.0% |
| ! | TACTAAATCCAAAGGATATA+AGG | + | chr7.2:42485346-42485365 | None:intergenic | 25.0% |
| ! | TGGAAAATACATGATTTAGT+GGG | - | chr7.2:42484486-42484505 | MS.gene46072:CDS | 25.0% |
| ! | TTAAATGTAATGACATATGC+AGG | + | chr7.2:42483250-42483269 | None:intergenic | 25.0% |
| ! | TTAAGTTTGAATTGATCTCA+TGG | - | chr7.2:42485198-42485217 | MS.gene46072:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr7.2:42484072-42484091 | MS.gene46072:intron | 25.0% |
| ! | TTGGAAAATACATGATTTAG+TGG | - | chr7.2:42484485-42484504 | MS.gene46072:CDS | 25.0% |
| ! | TTGTAAAAATTGCTTGTGAT+TGG | - | chr7.2:42486354-42486373 | MS.gene46072:intron | 25.0% |
| ! | TTGTAATTTATGATACTCTG+TGG | - | chr7.2:42483179-42483198 | MS.gene46072:CDS | 25.0% |
| !! | ATTAGTTCTTACTTCTTAAG+AGG | - | chr7.2:42484274-42484293 | MS.gene46072:intron | 25.0% |
| !! | TAAGTGATGTTCAATTTTGA+AGG | - | chr7.2:42484174-42484193 | MS.gene46072:CDS | 25.0% |
| !! | TACATACTTTATTTGGTACA+GGG | - | chr7.2:42485754-42485773 | MS.gene46072:intron | 25.0% |
| !!! | AAATTTTAGGTTGAAAGGTT+AGG | - | chr7.2:42483656-42483675 | MS.gene46072:intron | 25.0% |
| !!! | ATCAATAGGAGAGTTTTTTA+TGG | - | chr7.2:42484524-42484543 | MS.gene46072:CDS | 25.0% |
| !!! | CAGTTTTGAAATATCATGTT+TGG | - | chr7.2:42483913-42483932 | MS.gene46072:intron | 25.0% |
| !!! | CTGTATTTAGTTTTATTGTG+AGG | - | chr7.2:42483560-42483579 | MS.gene46072:intron | 25.0% |
| !!! | TTTTATTTTTTGATTCAGGC+CGG | - | chr7.2:42485943-42485962 | MS.gene46072:intron | 25.0% |
| AAAGGAAACCTGAAAAAGAA+TGG | + | chr7.2:42483149-42483168 | None:intergenic | 30.0% | |
| AACATGATGTGTTTCAAACA+TGG | + | chr7.2:42486486-42486505 | None:intergenic | 30.0% | |
| AACCAAGCTACAGAAATAAT+AGG | + | chr7.2:42484692-42484711 | None:intergenic | 30.0% | |
| ACATGATGTGTTTCAAACAT+GGG | + | chr7.2:42486485-42486504 | None:intergenic | 30.0% | |
| AGAAATTGACTGCAGAATAA+GGG | + | chr7.2:42485095-42485114 | None:intergenic | 30.0% | |
| ATGGGTCTCACTAAATTTAT+TGG | - | chr7.2:42484466-42484485 | MS.gene46072:CDS | 30.0% | |
| CTTAAGTTTAAGTGTGTGAT+TGG | - | chr7.2:42483497-42483516 | MS.gene46072:intron | 30.0% | |
| GAGAAATGTCATATACTACA+AGG | - | chr7.2:42485570-42485589 | MS.gene46072:intron | 30.0% | |
| GGTTGAAAAGTTATGTTTGA+AGG | - | chr7.2:42483874-42483893 | MS.gene46072:intron | 30.0% | |
| GTACAATTTAGTTAGATGGA+AGG | - | chr7.2:42483420-42483439 | MS.gene46072:intron | 30.0% | |
| GTCACATATTTCGTAATGAA+GGG | - | chr7.2:42486685-42486704 | MS.gene46072:CDS | 30.0% | |
| GTGATTGGTATAAACAGATT+TGG | - | chr7.2:42486369-42486388 | MS.gene46072:intron | 30.0% | |
| TAGAAATTGACTGCAGAATA+AGG | + | chr7.2:42485096-42485115 | None:intergenic | 30.0% | |
| TAGGAATGTAATTTATCAGC+CGG | - | chr7.2:42484318-42484337 | MS.gene46072:intron | 30.0% | |
| TATATGACATTTCTCTGCAT+TGG | + | chr7.2:42485565-42485584 | None:intergenic | 30.0% | |
| TATCAGTTGTAAGATAAAGC+AGG | + | chr7.2:42485730-42485749 | None:intergenic | 30.0% | |
| TATCCACATTAAAACCTTGT+TGG | - | chr7.2:42484867-42484886 | MS.gene46072:intron | 30.0% | |
| TTATCATATTATTAGCGGTG+TGG | + | chr7.2:42484042-42484061 | None:intergenic | 30.0% | |
| TTATGGGTCTTAACTTTATC+AGG | - | chr7.2:42484930-42484949 | MS.gene46072:intron | 30.0% | |
| ! | CTACATACTTTATTTGGTAC+AGG | - | chr7.2:42485753-42485772 | MS.gene46072:intron | 30.0% |
| ! | CTACTCTAGAAAAACCAAAT+AGG | - | chr7.2:42484208-42484227 | MS.gene46072:CDS | 30.0% |
| ! | GCTTTAAGTGTTATGTTTGA+AGG | - | chr7.2:42483956-42483975 | MS.gene46072:intron | 30.0% |
| !! | AAGAAGGATTTAGAGCATTT+TGG | - | chr7.2:42485037-42485056 | MS.gene46072:intron | 30.0% |
| !!! | ATAGGAGAGTTTTTTATGGA+AGG | - | chr7.2:42484528-42484547 | MS.gene46072:CDS | 30.0% |
| !!! | CGGTTTTGAAATATCATGTT+TGG | - | chr7.2:42483703-42483722 | MS.gene46072:intron | 30.0% |
| !!! | GAATTCATCTTTTTTCCCAA+GGG | + | chr7.2:42486207-42486226 | None:intergenic | 30.0% |
| !!! | TGAATTCATCTTTTTTCCCA+AGG | + | chr7.2:42486208-42486227 | None:intergenic | 30.0% |
| !!! | TGCGATTCAATAGTTTTGTT+TGG | - | chr7.2:42486327-42486346 | MS.gene46072:intron | 30.0% |
| !!! | TTTTTTGGTCAAATAGCTAC+CGG | + | chr7.2:42483525-42483544 | None:intergenic | 30.0% |
| AAATTGAAGAGATTGTCTGC+TGG | - | chr7.2:42484723-42484742 | MS.gene46072:CDS | 35.0% | |
| AAGGTAGAAGCTCTGTATTT+CGG | - | chr7.2:42483786-42483805 | MS.gene46072:intron | 35.0% | |
| ACCATAGCATTTGAATCATC+CGG | + | chr7.2:42485965-42485984 | None:intergenic | 35.0% | |
| CAACGTATTGTCAAAGAAGA+AGG | - | chr7.2:42485021-42485040 | MS.gene46072:intron | 35.0% | |
| CACACTTAAACTTAAGTGTC+CGG | + | chr7.2:42483493-42483512 | None:intergenic | 35.0% | |
| CATTTCCATTGGATCTTGTA+AGG | - | chr7.2:42486592-42486611 | MS.gene46072:intron | 35.0% | |
| CCTCATAGTCTCTAAACATA+CGG | + | chr7.2:42483990-42484009 | None:intergenic | 35.0% | |
| CGTGTTCTTACTAAATCCAA+AGG | + | chr7.2:42485354-42485373 | None:intergenic | 35.0% | |
| CTCCTAGTCTAGTAATAACA+GGG | + | chr7.2:42484633-42484652 | None:intergenic | 35.0% | |
| GACACTAATTAAGCCCTTAA+TGG | - | chr7.2:42485418-42485437 | MS.gene46072:intron | 35.0% | |
| GAGAAACTTAAAGCTATGCA+AGG | + | chr7.2:42485787-42485806 | None:intergenic | 35.0% | |
| GGTCACATATTTCGTAATGA+AGG | - | chr7.2:42486684-42486703 | MS.gene46072:CDS | 35.0% | |
| GTTATTACTAGACTAGGAGA+CGG | - | chr7.2:42484634-42484653 | MS.gene46072:intron | 35.0% | |
| TCTCCTAGTCTAGTAATAAC+AGG | + | chr7.2:42484634-42484653 | None:intergenic | 35.0% | |
| TCTTAACTTTATCAGGTGCA+AGG | - | chr7.2:42484937-42484956 | MS.gene46072:intron | 35.0% | |
| TGCAAATTGTGGTAAAAGCA+TGG | + | chr7.2:42485603-42485622 | None:intergenic | 35.0% | |
| TGTACGTGTACTTCAGAATT+TGG | - | chr7.2:42485163-42485182 | MS.gene46072:intron | 35.0% | |
| TGTCGAAAAGTTGTGTTTGA+AGG | - | chr7.2:42483767-42483786 | MS.gene46072:intron | 35.0% | |
| TGTGCATCATGTAAGAAAGT+TGG | + | chr7.2:42486169-42486188 | None:intergenic | 35.0% | |
| TTATTACTAGACTAGGAGAC+GGG | - | chr7.2:42484635-42484654 | MS.gene46072:intron | 35.0% | |
| ! | ACTTTGATAGCTGGAAAGAA+GGG | + | chr7.2:42486802-42486821 | None:intergenic | 35.0% |
| ! | ATGTAACTGGGTTGTTTCAT+TGG | - | chr7.2:42484822-42484841 | MS.gene46072:CDS | 35.0% |
| ! | ATGTGCTGTTATTAAACCCT+TGG | - | chr7.2:42486188-42486207 | MS.gene46072:intron | 35.0% |
| ! | GCAAATTGTGGTAAAAGCAT+GGG | + | chr7.2:42485602-42485621 | None:intergenic | 35.0% |
| ! | GTCTATAACACCAGTTTGTT+CGG | - | chr7.2:42486654-42486673 | MS.gene46072:intron | 35.0% |
| ! | TAACTGCCACTTATCGAAAA+AGG | - | chr7.2:42485478-42485497 | MS.gene46072:intron | 35.0% |
| ! | TAGACTCACCATTCTTTTTC+AGG | - | chr7.2:42483138-42483157 | MS.gene46072:CDS | 35.0% |
| ! | TCTATAACACCAGTTTGTTC+GGG | - | chr7.2:42486655-42486674 | MS.gene46072:intron | 35.0% |
| ! | TGTAACTGGGTTGTTTCATT+GGG | - | chr7.2:42484823-42484842 | MS.gene46072:CDS | 35.0% |
| ! | TGTGCTGTTATTAAACCCTT+GGG | - | chr7.2:42486189-42486208 | MS.gene46072:intron | 35.0% |
| ! | TTTATTTGGTACAGGGTGTT+GGG | - | chr7.2:42485761-42485780 | MS.gene46072:intron | 35.0% |
| !! | AGCATTTTGGAAAGGCAATT+TGG | - | chr7.2:42485050-42485069 | MS.gene46072:intron | 35.0% |
| !! | AGCCTATTATTTCTGTAGCT+TGG | - | chr7.2:42484687-42484706 | MS.gene46072:intron | 35.0% |
| !! | AGGATTCTTTGGAATGTACA+AGG | - | chr7.2:42485630-42485649 | MS.gene46072:intron | 35.0% |
| !! | CAAGGTATGCATTTTGATGT+CGG | - | chr7.2:42484955-42484974 | MS.gene46072:intron | 35.0% |
| !! | GAAGGACATTTGATTTGTTG+GGG | - | chr7.2:42483438-42483457 | MS.gene46072:intron | 35.0% |
| !! | GGAAGGACATTTGATTTGTT+GGG | - | chr7.2:42483437-42483456 | MS.gene46072:intron | 35.0% |
| !! | GGATTCTTTGGAATGTACAA+GGG | - | chr7.2:42485631-42485650 | MS.gene46072:intron | 35.0% |
| !! | GGATTTAGAGCATTTTGGAA+AGG | - | chr7.2:42485042-42485061 | MS.gene46072:intron | 35.0% |
| !! | GTACCAACAAGGTTTTAATG+TGG | + | chr7.2:42484873-42484892 | None:intergenic | 35.0% |
| !! | GTTCTTTTTGGAAGTCTCAA+AGG | - | chr7.2:42485824-42485843 | MS.gene46072:intron | 35.0% |
| !! | TGGAAGGACATTTGATTTGT+TGG | - | chr7.2:42483436-42483455 | MS.gene46072:intron | 35.0% |
| !!! | AGGTAATTGCCACTTTTTGT+TGG | - | chr7.2:42485385-42485404 | MS.gene46072:intron | 35.0% |
| !!! | TTGTTTTTGTTTGTGCGTTC+CGG | + | chr7.2:42486291-42486310 | None:intergenic | 35.0% |
| AACCATATGTACGAAGCAAG+AGG | + | chr7.2:42485902-42485921 | None:intergenic | 40.0% | |
| ACCACAATTTGCAGAGATGA+AGG | - | chr7.2:42485610-42485629 | MS.gene46072:intron | 40.0% | |
| ACTGTTGTAGTTCGTTCAAC+TGG | - | chr7.2:42484891-42484910 | MS.gene46072:intron | 40.0% | |
| AGAATGGTGAGTCTAGAAAG+AGG | + | chr7.2:42483133-42483152 | None:intergenic | 40.0% | |
| AGCATAACAGTCTCAACTCT+CGG | + | chr7.2:42485536-42485555 | None:intergenic | 40.0% | |
| AGCCCTGTTATTACTAGACT+AGG | - | chr7.2:42484628-42484647 | MS.gene46072:intron | 40.0% | |
| AGCTATTGCATTCTGTTCTG+GGG | - | chr7.2:42485238-42485257 | MS.gene46072:intron | 40.0% | |
| AGTCTAGTAATAACAGGGCT+TGG | + | chr7.2:42484628-42484647 | None:intergenic | 40.0% | |
| ATAAAAACAATACCGACGCC+GGG | + | chr7.2:42486759-42486778 | None:intergenic | 40.0% | |
| ATGGCAGAAGCTCTGTATTT+CGG | - | chr7.2:42483683-42483702 | MS.gene46072:intron | 40.0% | |
| CAGCTATTGCATTCTGTTCT+GGG | - | chr7.2:42485237-42485256 | MS.gene46072:intron | 40.0% | |
| CATAAAAACAATACCGACGC+CGG | + | chr7.2:42486760-42486779 | None:intergenic | 40.0% | |
| CATTGGATCTTGTAAGGAGA+AGG | - | chr7.2:42486598-42486617 | MS.gene46072:intron | 40.0% | |
| CCGTATGTTTAGAGACTATG+AGG | - | chr7.2:42483987-42484006 | MS.gene46072:intron | 40.0% | |
| CTTCTCCTTACAAGATCCAA+TGG | + | chr7.2:42486600-42486619 | None:intergenic | 40.0% | |
| GAACTACAACAGTACCAACA+AGG | + | chr7.2:42484884-42484903 | None:intergenic | 40.0% | |
| GCTGTTATAAGTTGCATGCT+TGG | - | chr7.2:42486393-42486412 | MS.gene46072:intron | 40.0% | |
| GGTTGAAAGGTTAGGTTTGA+TGG | - | chr7.2:42483664-42483683 | MS.gene46072:intron | 40.0% | |
| TATTACTAGACTAGGAGACG+GGG | - | chr7.2:42484636-42484655 | MS.gene46072:intron | 40.0% | |
| TCCTTCATCTCTGCAAATTG+TGG | + | chr7.2:42485614-42485633 | None:intergenic | 40.0% | |
| TCTTGCTTGTGGAAGTCTTT+CGG | - | chr7.2:42485988-42486007 | MS.gene46072:intron | 40.0% | |
| TGCAGAGATGAAGGATTCTT+TGG | - | chr7.2:42485619-42485638 | MS.gene46072:intron | 40.0% | |
| TGTGTACTTGCACTGAATTG+AGG | - | chr7.2:42485853-42485872 | MS.gene46072:intron | 40.0% | |
| TGTTTAGAGACTATGAGGCA+TGG | - | chr7.2:42483992-42484011 | MS.gene46072:CDS | 40.0% | |
| TTCCTCTTGCTTCGTACATA+TGG | - | chr7.2:42485897-42485916 | MS.gene46072:intron | 40.0% | |
| TTTAAGTGTGTGATTGGTGC+CGG | - | chr7.2:42483503-42483522 | MS.gene46072:intron | 40.0% | |
| TTTCGTAATGAAGGGATACG+AGG | - | chr7.2:42486693-42486712 | MS.gene46072:CDS | 40.0% | |
| ! | AGTTTTACCAGTGTCGTGTT+CGG | - | chr7.2:42483289-42483308 | MS.gene46072:intron | 40.0% |
| ! | CTTTATTTGGTACAGGGTGT+TGG | - | chr7.2:42485760-42485779 | MS.gene46072:intron | 40.0% |
| ! | GACTTTGATAGCTGGAAAGA+AGG | + | chr7.2:42486803-42486822 | None:intergenic | 40.0% |
| ! | TTTGGAATGTACAAGGGACT+TGG | - | chr7.2:42485637-42485656 | MS.gene46072:intron | 40.0% |
| !! | ACTGTTTCTCAGCTTTTAGC+TGG | - | chr7.2:42483070-42483089 | MS.gene46072:CDS | 40.0% |
| !!! | GTTGCTCCTTTTTCGATAAG+TGG | + | chr7.2:42485487-42485506 | None:intergenic | 40.0% |
| AACTTAAGTGTCCGGAGAAG+TGG | + | chr7.2:42483485-42483504 | None:intergenic | 45.0% | |
| ACCAAATGTCCCGAACAAAC+TGG | + | chr7.2:42486667-42486686 | None:intergenic | 45.0% | |
| ACTACGAAGCAATGACACAC+AGG | + | chr7.2:42483318-42483337 | None:intergenic | 45.0% | |
| ACTCGCAGCAACATTTCCAT+TGG | - | chr7.2:42486581-42486600 | MS.gene46072:intron | 45.0% | |
| ACTTAAGTGTCCGGAGAAGT+GGG | + | chr7.2:42483484-42483503 | None:intergenic | 45.0% | |
| AGGAGAAGGATGCAGTTAGA+AGG | - | chr7.2:42486612-42486631 | MS.gene46072:intron | 45.0% | |
| ATCCAAAGGATATAAGGCCG+AGG | + | chr7.2:42485340-42485359 | None:intergenic | 45.0% | |
| CAACACATTAAACCAACCCG+TGG | + | chr7.2:42484350-42484369 | None:intergenic | 45.0% | |
| CCAGAACAGAATGCAATAGC+TGG | + | chr7.2:42485239-42485258 | None:intergenic | 45.0% | |
| CCAGCTATTGCATTCTGTTC+TGG | - | chr7.2:42485236-42485255 | MS.gene46072:intron | 45.0% | |
| CTAGCTCCCAAGAAACAATC+AGG | - | chr7.2:42486249-42486268 | MS.gene46072:intron | 45.0% | |
| CTTGCTTGTGGAAGTCTTTC+GGG | - | chr7.2:42485989-42486008 | MS.gene46072:intron | 45.0% | |
| GAGAAGGATGCAGTTAGAAG+GGG | - | chr7.2:42486614-42486633 | MS.gene46072:intron | 45.0% | |
| GAGAATCATAGAGCAAAGGC+TGG | - | chr7.2:42485261-42485280 | MS.gene46072:intron | 45.0% | |
| GAGTACTACAAGGTTGTTCC+CGG | - | chr7.2:42486738-42486757 | MS.gene46072:CDS | 45.0% | |
| GCATTGTATCAGCAACAGGT+GGG | - | chr7.2:42486011-42486030 | MS.gene46072:intron | 45.0% | |
| GCCGGATGATTCAAATGCTA+TGG | - | chr7.2:42485961-42485980 | MS.gene46072:intron | 45.0% | |
| GCTATTGCATTCTGTTCTGG+GGG | - | chr7.2:42485239-42485258 | MS.gene46072:intron | 45.0% | |
| GCTGTTAGAAGTTGCCTACT+TGG | - | chr7.2:42486117-42486136 | MS.gene46072:intron | 45.0% | |
| GGAACAACCTTGTAGTACTC+GGG | + | chr7.2:42486738-42486757 | None:intergenic | 45.0% | |
| GGAGAAGGATGCAGTTAGAA+GGG | - | chr7.2:42486613-42486632 | MS.gene46072:intron | 45.0% | |
| GGGAACAACCTTGTAGTACT+CGG | + | chr7.2:42486739-42486758 | None:intergenic | 45.0% | |
| GGGATACGAGGTTTGTATAG+AGG | - | chr7.2:42486705-42486724 | MS.gene46072:CDS | 45.0% | |
| GTCTTTGTGCACTTTGTCAG+TGG | - | chr7.2:42485291-42485310 | MS.gene46072:intron | 45.0% | |
| GTTAGAAGTTGCCTACTTGG+TGG | - | chr7.2:42486120-42486139 | MS.gene46072:intron | 45.0% | |
| TACGTTGAGCCTCGTACAAA+AGG | + | chr7.2:42485008-42485027 | None:intergenic | 45.0% | |
| TGTGAAACACAGACACTCCT+CGG | + | chr7.2:42484125-42484144 | None:intergenic | 45.0% | |
| TTTGTGCACTTTGTCAGTGG+TGG | - | chr7.2:42485294-42485313 | MS.gene46072:intron | 45.0% | |
| ! | ACCAGTTTGTTCGGGACATT+TGG | - | chr7.2:42486663-42486682 | MS.gene46072:intron | 45.0% |
| ! | ACGAGAGCTTGCGTTCTTTT+TGG | - | chr7.2:42485812-42485831 | MS.gene46072:intron | 45.0% |
| ! | CATTTTGCCCGAGTACTACA+AGG | - | chr7.2:42486728-42486747 | MS.gene46072:CDS | 45.0% |
| ! | GCATGCTTGGTGAGTTAATG+TGG | - | chr7.2:42486406-42486425 | MS.gene46072:intron | 45.0% |
| ! | GGTCAGCCTGATTGTTTCTT+GGG | + | chr7.2:42486258-42486277 | None:intergenic | 45.0% |
| ! | TTTGTCAGTGGTGGTTTGTC+AGG | - | chr7.2:42485303-42485322 | MS.gene46072:intron | 45.0% |
| !! | GGGCTTGGTTAGTTTGAATG+AGG | + | chr7.2:42484613-42484632 | None:intergenic | 45.0% |
| !! | GTTTCTCAGCTTTTAGCTGG+TGG | - | chr7.2:42483073-42483092 | MS.gene46072:CDS | 45.0% |
| !! | TCAGCTTTTAGCTGGTGGTT+TGG | - | chr7.2:42483078-42483097 | MS.gene46072:CDS | 45.0% |
| !!! | CAAGACTAGCCTTTTGTACG+AGG | - | chr7.2:42484996-42485015 | MS.gene46072:intron | 45.0% |
| AAGAACACGACTTGCAGCAC+AGG | - | chr7.2:42485365-42485384 | MS.gene46072:intron | 50.0% | |
| ACACAGACACTCCTCGGATT+AGG | + | chr7.2:42484119-42484138 | None:intergenic | 50.0% | |
| AGAACGCAAGCTCTCGTAAG+CGG | + | chr7.2:42485809-42485828 | None:intergenic | 50.0% | |
| AGGATGCAGTTAGAAGGGGT+TGG | - | chr7.2:42486618-42486637 | MS.gene46072:intron | 50.0% | |
| AGGCTGACCCTGTGTTAATC+CGG | - | chr7.2:42486269-42486288 | MS.gene46072:intron | 50.0% | |
| ATGCAGTTAGAAGGGGTTGG+TGG | - | chr7.2:42486621-42486640 | MS.gene46072:intron | 50.0% | |
| GAGACTATGAGGCATGGACA+CGG | - | chr7.2:42483998-42484017 | MS.gene46072:CDS | 50.0% | |
| GCTATGGTCAGTCTTGCTTG+TGG | - | chr7.2:42485977-42485996 | MS.gene46072:intron | 50.0% | |
| GGCATTGTATCAGCAACAGG+TGG | - | chr7.2:42486010-42486029 | MS.gene46072:intron | 50.0% | |
| GGGGGAGAATCATAGAGCAA+AGG | - | chr7.2:42485257-42485276 | MS.gene46072:intron | 50.0% | |
| GTGCGTTCCGGATTAACACA+GGG | + | chr7.2:42486279-42486298 | None:intergenic | 50.0% | |
| TCCGGAGAAGTGGGATATCA+CGG | + | chr7.2:42483475-42483494 | None:intergenic | 50.0% | |
| TCTTGCTCAGTGCTGTGACA+TGG | + | chr7.2:42484981-42485000 | None:intergenic | 50.0% | |
| TGTGCGTTCCGGATTAACAC+AGG | + | chr7.2:42486280-42486299 | None:intergenic | 50.0% | |
| ! | GGGTCAGCCTGATTGTTTCT+TGG | + | chr7.2:42486259-42486278 | None:intergenic | 50.0% |
| ! | TCGGGCATTGTATCAGCAAC+AGG | - | chr7.2:42486007-42486026 | MS.gene46072:intron | 50.0% |
| ! | TGCCTCGGCCTTATATCCTT+TGG | - | chr7.2:42485335-42485354 | MS.gene46072:intron | 50.0% |
| !! | AAGTTGCCTACTTGGTGGTG+CGG | - | chr7.2:42486125-42486144 | MS.gene46072:intron | 50.0% |
| !! | ACTAGGAGACGGGGTTTTGA+AGG | - | chr7.2:42484645-42484664 | MS.gene46072:intron | 50.0% |
| !! | CTTTTAGCTGGTGGTTTGGC+TGG | - | chr7.2:42483082-42483101 | MS.gene46072:CDS | 50.0% |
| CCCGTGATATCCCACTTCTC+CGG | - | chr7.2:42483471-42483490 | MS.gene46072:intron | 55.0% | |
| CCGGAGAAGTGGGATATCAC+GGG | + | chr7.2:42483474-42483493 | None:intergenic | 55.0% | |
| GTCAGGTATGACAGCTGCCT+CGG | - | chr7.2:42485320-42485339 | MS.gene46072:intron | 55.0% | |
| TACAAGGTTGTTCCCGGCGT+CGG | - | chr7.2:42486744-42486763 | MS.gene46072:CDS | 55.0% | |
| TTATCAGCCGGTGCTTGCCA+CGG | - | chr7.2:42484330-42484349 | MS.gene46072:intron | 55.0% | |
| !! | GGGACTTGGTGCAACGTTGT+TGG | - | chr7.2:42485651-42485670 | MS.gene46072:intron | 55.0% |
| !! | GGTGGTTTGGCTGGTGCTTT+TGG | - | chr7.2:42483091-42483110 | MS.gene46072:CDS | 55.0% |
| !! | TATGTGTCGGTGTCGTGTCG+CGG | - | chr7.2:42484085-42484104 | MS.gene46072:intron | 55.0% |
| !!! | CGGGGTTTTGAAGGCAAGAG+TGG | - | chr7.2:42484654-42484673 | MS.gene46072:intron | 55.0% |
| AACCAACCCGTGGCAAGCAC+CGG | + | chr7.2:42484340-42484359 | None:intergenic | 60.0% | |
| AACGCACCGCACCACCAAGT+AGG | + | chr7.2:42486134-42486153 | None:intergenic | 60.0% | |
| ATGGACACGGACACCGGACA+CGG | - | chr7.2:42484011-42484030 | MS.gene46072:CDS | 60.0% | |
| CAGGACACCGAACACGACAC+TGG | + | chr7.2:42483299-42483318 | None:intergenic | 60.0% | |
| TATCAGCCGGTGCTTGCCAC+GGG | - | chr7.2:42484331-42484350 | MS.gene46072:intron | 60.0% | |
| TGAGGCATGGACACGGACAC+CGG | - | chr7.2:42484005-42484024 | MS.gene46072:CDS | 60.0% | |
| !! | ATGTGTCGGTGTCGTGTCGC+GGG | - | chr7.2:42484086-42484105 | MS.gene46072:intron | 60.0% |
| !! | TGTGTCGGTGTCGTGTCGCG+GGG | - | chr7.2:42484087-42484106 | MS.gene46072:intron | 65.0% |
| AGCCGGTGCTTGCCACGGGT+TGG | - | chr7.2:42484335-42484354 | MS.gene46072:intron | 70.0% | |
| CGGGGGACACGCCTAATCCG+AGG | - | chr7.2:42484105-42484124 | MS.gene46072:intron | 70.0% | |
| CGGTGTGGCGTGTCCGTGTC+CGG | + | chr7.2:42484027-42484046 | None:intergenic | 70.0% | |
| !! | GTGTCGGTGTCGTGTCGCGG+GGG | - | chr7.2:42484088-42484107 | MS.gene46072:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 42483010 | 42486827 | 42483010 | ID=MS.gene46072 |
| chr7.2 | mRNA | 42483010 | 42486827 | 42483010 | ID=MS.gene46072.t1;Parent=MS.gene46072 |
| chr7.2 | exon | 42486678 | 42486827 | 42486678 | ID=MS.gene46072.t1.exon1;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42486678 | 42486827 | 42486678 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| chr7.2 | exon | 42484700 | 42484885 | 42484700 | ID=MS.gene46072.t1.exon2;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42484700 | 42484885 | 42484700 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| chr7.2 | exon | 42484451 | 42484597 | 42484451 | ID=MS.gene46072.t1.exon3;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42484451 | 42484597 | 42484451 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| chr7.2 | exon | 42484165 | 42484266 | 42484165 | ID=MS.gene46072.t1.exon4;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42484165 | 42484266 | 42484165 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| chr7.2 | exon | 42483992 | 42484062 | 42483992 | ID=MS.gene46072.t1.exon5;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42483992 | 42484062 | 42483992 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| chr7.2 | exon | 42483809 | 42483876 | 42483809 | ID=MS.gene46072.t1.exon6;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42483809 | 42483876 | 42483809 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| chr7.2 | exon | 42483010 | 42483248 | 42483010 | ID=MS.gene46072.t1.exon7;Parent=MS.gene46072.t1 |
| chr7.2 | CDS | 42483010 | 42483248 | 42483010 | ID=cds.MS.gene46072.t1;Parent=MS.gene46072.t1 |
| Gene Sequence |
| Protein sequence |
