Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47435.t1 | XP_013468119.1 | 97.7 | 221 | 4 | 1 | 1 | 220 | 66 | 286 | 4.40E-122 | 447.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47435.t1 | Q8L817 | 51.2 | 209 | 97 | 3 | 1 | 208 | 68 | 272 | 2.0e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47435.t1 | A0A072VKK0 | 97.7 | 221 | 4 | 1 | 1 | 220 | 66 | 286 | 3.2e-122 | 447.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050082 | MS.gene47435 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene47435 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene051364 | MS.gene47435 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene47435 | 0.802777 | 4.77E-49 | -1.69E-46 |
| MS.gene051367 | MS.gene47435 | 0.807378 | 5.20E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene47435 | 0.920103 | 1.95E-87 | -1.69E-46 |
| MS.gene055942 | MS.gene47435 | 0.809291 | 2.04E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene47435 | 0.813814 | 2.12E-51 | -1.69E-46 |
| MS.gene058068 | MS.gene47435 | 0.811403 | 7.12E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene47435 | 0.805714 | 1.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47435.t1 | MTR_1g062860 | 97.738 | 221 | 4 | 1 | 1 | 220 | 66 | 286 | 9.14e-164 | 453 |
| MS.gene47435.t1 | MTR_1g062880 | 63.942 | 208 | 73 | 2 | 1 | 207 | 67 | 273 | 1.64e-94 | 278 |
| MS.gene47435.t1 | MTR_7g102960 | 58.571 | 210 | 83 | 4 | 1 | 207 | 60 | 268 | 1.33e-80 | 242 |
| MS.gene47435.t1 | MTR_0219s0070 | 48.341 | 211 | 102 | 3 | 1 | 209 | 65 | 270 | 1.03e-67 | 209 |
| MS.gene47435.t1 | MTR_7g090950 | 44.292 | 219 | 112 | 6 | 1 | 218 | 61 | 270 | 3.07e-55 | 177 |
| MS.gene47435.t1 | MTR_1g059940 | 39.535 | 215 | 121 | 3 | 2 | 210 | 55 | 266 | 4.14e-53 | 172 |
| MS.gene47435.t1 | MTR_1g059960 | 37.209 | 215 | 126 | 3 | 2 | 210 | 34 | 245 | 5.28e-50 | 163 |
| MS.gene47435.t1 | MTR_1g059960 | 37.209 | 215 | 126 | 3 | 2 | 210 | 55 | 266 | 7.25e-50 | 163 |
| MS.gene47435.t1 | MTR_1g059900 | 40.314 | 191 | 106 | 2 | 26 | 210 | 12 | 200 | 5.40e-48 | 156 |
| MS.gene47435.t1 | MTR_0219s0130 | 55.556 | 63 | 28 | 0 | 146 | 208 | 3 | 65 | 1.09e-20 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47435.t1 | AT1G08080 | 51.196 | 209 | 97 | 3 | 1 | 208 | 68 | 272 | 2.43e-71 | 219 |
| MS.gene47435.t1 | AT2G28210 | 50.476 | 210 | 98 | 4 | 1 | 208 | 67 | 272 | 5.93e-70 | 215 |
| MS.gene47435.t1 | AT4G20990 | 49.515 | 206 | 97 | 3 | 2 | 207 | 65 | 263 | 1.58e-67 | 209 |
| MS.gene47435.t1 | AT1G08065 | 48.095 | 210 | 102 | 5 | 1 | 207 | 63 | 268 | 8.23e-59 | 187 |
| MS.gene47435.t1 | AT5G04180 | 42.308 | 208 | 116 | 2 | 2 | 208 | 55 | 259 | 4.67e-54 | 174 |
| MS.gene47435.t1 | AT4G21000 | 48.824 | 170 | 80 | 3 | 1 | 170 | 65 | 227 | 1.07e-52 | 171 |
| MS.gene47435.t1 | AT3G52720 | 39.815 | 216 | 112 | 5 | 1 | 206 | 57 | 264 | 1.83e-46 | 155 |
| MS.gene47435.t1 | AT3G52720 | 39.815 | 216 | 112 | 5 | 1 | 206 | 57 | 264 | 1.83e-46 | 155 |
| MS.gene47435.t1 | AT3G52720 | 39.815 | 216 | 112 | 5 | 1 | 206 | 57 | 264 | 1.83e-46 | 155 |
| MS.gene47435.t1 | AT5G56330 | 38.095 | 210 | 86 | 5 | 1 | 208 | 168 | 335 | 3.50e-36 | 130 |
| MS.gene47435.t1 | AT3G52720 | 39.444 | 180 | 91 | 5 | 1 | 170 | 57 | 228 | 4.59e-36 | 127 |
| MS.gene47435.t1 | AT5G56330 | 42.958 | 142 | 74 | 5 | 1 | 139 | 168 | 305 | 4.67e-28 | 108 |
| MS.gene47435.t1 | AT2G28210 | 47.191 | 89 | 41 | 3 | 1 | 84 | 67 | 154 | 5.01e-21 | 85.9 |
Find 42 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAATGTCGTAGGTATTT+TGG | 0.225329 | 1.4:-51740334 | MS.gene47435:intron |
| GAAGAAGAAGAAAGAGTAAT+AGG | 0.241207 | 1.4:-51737673 | MS.gene47435:CDS |
| GGCATTAGAAGATTTATATT+TGG | 0.274180 | 1.4:+51741426 | None:intergenic |
| ATCTTGTTTCCCTTAGGATT+TGG | 0.276829 | 1.4:+51737874 | None:intergenic |
| TTGATAACTTGACGATAGTT+TGG | 0.301018 | 1.4:+51741451 | None:intergenic |
| GTTGGTGCTTTCTATAAAAT+TGG | 0.304303 | 1.4:-51737844 | MS.gene47435:CDS |
| CACCTGAGAGAGAAAAGAAT+TGG | 0.332021 | 1.4:+51737816 | None:intergenic |
| TCTCTCATTAGACAAATCTA+TGG | 0.352209 | 1.4:+51741486 | None:intergenic |
| TACATACTTCCTGCCATTGA+TGG | 0.354563 | 1.4:+51740229 | None:intergenic |
| GTTGTGCTACTTTGTTTGAA+TGG | 0.383597 | 1.4:+51736974 | None:intergenic |
| CTATTGTTATGTGGCTGCCT+TGG | 0.418783 | 1.4:+51737022 | None:intergenic |
| TTGTGCTACTTTGTTTGAAT+GGG | 0.456274 | 1.4:+51736975 | None:intergenic |
| AAGATATATTATAGATATGT+TGG | 0.456587 | 1.4:-51737616 | MS.gene47435:CDS |
| ATGGCCTCTATTGATGATAG+TGG | 0.479480 | 1.4:+51741405 | None:intergenic |
| CCTTCTGAACATTCCATCAA+TGG | 0.483593 | 1.4:-51740242 | MS.gene47435:CDS |
| ACAGCAATCTTGTTTCCCTT+AGG | 0.488040 | 1.4:+51737868 | None:intergenic |
| ACCTGAGAGAGAAAAGAATT+GGG | 0.488834 | 1.4:+51737817 | None:intergenic |
| GCATGTAAGTCCAAATCCTA+AGG | 0.503479 | 1.4:-51737884 | MS.gene47435:CDS |
| GCTGGCTCAATACGTATCAA+TGG | 0.514482 | 1.4:-51740302 | MS.gene47435:CDS |
| ACAACTCCTCCTTGCACTGA+AGG | 0.515253 | 1.4:-51737586 | MS.gene47435:CDS |
| CCATCACAAATCCAAACAAA+AGG | 0.519756 | 1.4:-51737640 | MS.gene47435:CDS |
| GTATGCTCACCGCAATATCA+TGG | 0.524664 | 1.4:+51741386 | None:intergenic |
| AAGGAGAGTGCCAGTGACAT+TGG | 0.529345 | 1.4:+51740261 | None:intergenic |
| AATGCCACTATCATCAATAG+AGG | 0.529463 | 1.4:-51741409 | MS.gene47435:CDS |
| GACAGTTTCAAAAGCACAAG+TGG | 0.535548 | 1.4:-51737190 | MS.gene47435:CDS |
| TGTATGTCTCTATTGTTATG+TGG | 0.539821 | 1.4:+51737013 | None:intergenic |
| CATGTGGAACCTTGACAAGA+AGG | 0.544132 | 1.4:-51737560 | MS.gene47435:intron |
| CTGAACATTCCATCAATGGC+AGG | 0.549730 | 1.4:-51740238 | MS.gene47435:CDS |
| CTCTCATTAGACAAATCTAT+GGG | 0.570666 | 1.4:+51741487 | None:intergenic |
| TGAATGGGTAGTATTTGTGT+AGG | 0.575102 | 1.4:+51736990 | None:intergenic |
| CAGAGATGAATGCAAGGCCA+AGG | 0.578908 | 1.4:-51737039 | MS.gene47435:CDS |
| CACATGACACCTTCAGTGCA+AGG | 0.589535 | 1.4:+51737577 | None:intergenic |
| CCATTGATGGAATGTTCAGA+AGG | 0.605461 | 1.4:+51740242 | None:intergenic |
| CTTGCACTGAAGGTGTCATG+TGG | 0.609373 | 1.4:-51737576 | MS.gene47435:CDS |
| CAATAGAGGCCATGATATTG+CGG | 0.609893 | 1.4:-51741395 | MS.gene47435:intron |
| AGCATGCAGAGATGAATGCA+AGG | 0.630599 | 1.4:-51737045 | MS.gene47435:CDS |
| GGAAACAAGATTGCTGTGGT+TGG | 0.632458 | 1.4:-51737862 | MS.gene47435:CDS |
| CATGTAAGTCCAAATCCTAA+GGG | 0.667122 | 1.4:-51737883 | MS.gene47435:CDS |
| GGAAGAAGACATAAAGCACA+TGG | 0.668646 | 1.4:-51737701 | MS.gene47435:CDS |
| TAAGGGAAACAAGATTGCTG+TGG | 0.684027 | 1.4:-51737866 | MS.gene47435:CDS |
| ATATGACTTAGAGATGCACA+TGG | 0.747184 | 1.4:-51737908 | MS.gene47435:CDS |
| ATGACACCTTCAGTGCAAGG+AGG | 0.754290 | 1.4:+51737580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACAAACAATATTAA+CGG | + | chr1.4:51739355-51739374 | None:intergenic | 10.0% |
| !! | AAATTAATAAATATGTCTAT+AGG | + | chr1.4:51737489-51737508 | None:intergenic | 10.0% |
| !! | AAATTATCTTTATTAACTAT+TGG | - | chr1.4:51738664-51738683 | MS.gene47435:intron | 10.0% |
| !! | AATAAATTAAATTGCAATTT+GGG | - | chr1.4:51739799-51739818 | MS.gene47435:intron | 10.0% |
| !! | AATAGTTAATAAAGATAATT+TGG | + | chr1.4:51738665-51738684 | None:intergenic | 10.0% |
| !! | AATTAATAAATATGTCTATA+GGG | + | chr1.4:51737488-51737507 | None:intergenic | 10.0% |
| !! | ATATAATATAAATTTAAACC+CGG | - | chr1.4:51737382-51737401 | MS.gene47435:intron | 10.0% |
| !! | GAAAAGAAATATAAAAATAA+GGG | - | chr1.4:51739193-51739212 | MS.gene47435:intron | 10.0% |
| !! | TAATAAATTAAATTGCAATT+TGG | - | chr1.4:51739798-51739817 | MS.gene47435:intron | 10.0% |
| !! | TGAAAAGAAATATAAAAATA+AGG | - | chr1.4:51739192-51739211 | MS.gene47435:intron | 10.0% |
| !! | TTTGAATAATTAAAAAAATG+TGG | - | chr1.4:51738936-51738955 | MS.gene47435:intron | 10.0% |
| !!! | ATAATTGTTTTTTTTTTTGA+AGG | - | chr1.4:51737523-51737542 | MS.gene47435:intron | 10.0% |
| !!! | ATCTATTTTATAAAAACTTA+AGG | - | chr1.4:51740167-51740186 | MS.gene47435:intron | 10.0% |
| !!! | TATATTTTATGATTTTTTGT+TGG | - | chr1.4:51737198-51737217 | MS.gene47435:CDS | 10.0% |
| !!! | TCCTTTTAATAAATTATATT+AGG | - | chr1.4:51739051-51739070 | MS.gene47435:intron | 10.0% |
| !!! | TCTATTTTATAAAAACTTAA+GGG | - | chr1.4:51740168-51740187 | MS.gene47435:intron | 10.0% |
| !!! | TTTTAAATAAAAAAATTAGG+TGG | - | chr1.4:51738280-51738299 | MS.gene47435:intron | 10.0% |
| !!! | TTTTTTTAATTAATCAGAAA+TGG | - | chr1.4:51737925-51737944 | MS.gene47435:intron | 10.0% |
| !! | AAGATAAAGATAAAGAAAAT+GGG | - | chr1.4:51739837-51739856 | MS.gene47435:intron | 15.0% |
| !! | AAGATATATTATAGATATGT+TGG | - | chr1.4:51740844-51740863 | MS.gene47435:intron | 15.0% |
| !! | AATATTTATTGCATTATAGT+CGG | + | chr1.4:51738047-51738066 | None:intergenic | 15.0% |
| !! | ACTTTCATTGTTAAAAAAAT+AGG | - | chr1.4:51739082-51739101 | MS.gene47435:intron | 15.0% |
| !! | AGAAAAAGTTATTATTGTAT+TGG | - | chr1.4:51738751-51738770 | MS.gene47435:intron | 15.0% |
| !! | AGAAGAAAAATGAATAAATA+AGG | + | chr1.4:51741163-51741182 | None:intergenic | 15.0% |
| !! | ATAAATTAAATTGCAATTTG+GGG | - | chr1.4:51739800-51739819 | MS.gene47435:intron | 15.0% |
| !! | GCCTAATATAATTTATTAAA+AGG | + | chr1.4:51739055-51739074 | None:intergenic | 15.0% |
| !! | TAAAAATAACTGATATTCAA+TGG | - | chr1.4:51740271-51740290 | MS.gene47435:CDS | 15.0% |
| !! | TTTAAAAAGAAATTCTATCA+AGG | + | chr1.4:51738267-51738286 | None:intergenic | 15.0% |
| !!! | ATCTATTTTATGAAAACTTA+AGG | + | chr1.4:51739297-51739316 | None:intergenic | 15.0% |
| !!! | ATTGAATATCAGTTATTTTT+AGG | + | chr1.4:51740272-51740291 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr1.4:51738791-51738810 | MS.gene47435:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr1.4:51738688-51738707 | MS.gene47435:intron | 15.0% |
| !!! | TCTATTTTATGAAAACTTAA+GGG | + | chr1.4:51739296-51739315 | None:intergenic | 15.0% |
| !!! | TTGAATATCAGTTATTTTTA+GGG | + | chr1.4:51740271-51740290 | None:intergenic | 15.0% |
| !! | AAAAAATTCTTTACCAACAA+AGG | + | chr1.4:51737910-51737929 | None:intergenic | 20.0% |
| !! | AAAGTCAAATGTATTTGATT+CGG | - | chr1.4:51737312-51737331 | MS.gene47435:intron | 20.0% |
| !! | AATAGGTGCATATATTAAAT+CGG | - | chr1.4:51739099-51739118 | MS.gene47435:intron | 20.0% |
| !! | AATATACTAGTACTACTATA+TGG | + | chr1.4:51737456-51737475 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr1.4:51738631-51738650 | MS.gene47435:intron | 20.0% |
| !! | AATTTCAATACAATTTCTCA+AGG | + | chr1.4:51739779-51739798 | None:intergenic | 20.0% |
| !! | CAAGATAAAGATAAAGAAAA+TGG | - | chr1.4:51739836-51739855 | MS.gene47435:intron | 20.0% |
| !! | TAAATTAAATTGCAATTTGG+GGG | - | chr1.4:51739801-51739820 | MS.gene47435:intron | 20.0% |
| !! | TACGTGAAAGATTAATTTAA+TGG | + | chr1.4:51739162-51739181 | None:intergenic | 20.0% |
| !! | TGGATAAAATATAAGTATGT+TGG | + | chr1.4:51738338-51738357 | None:intergenic | 20.0% |
| !! | TTAATGATGTTAAGAGATAA+GGG | + | chr1.4:51739328-51739347 | None:intergenic | 20.0% |
| !! | TTCACATATAAATGATCTAA+TGG | + | chr1.4:51738112-51738131 | None:intergenic | 20.0% |
| !!! | AGTGTAAGTTTTAAAAATAG+AGG | - | chr1.4:51740196-51740215 | MS.gene47435:intron | 20.0% |
| !!! | CAAAATTGTTTTCTGTTTAA+TGG | + | chr1.4:51739390-51739409 | None:intergenic | 20.0% |
| !!! | CATTAAACAGAAAACAATTT+TGG | - | chr1.4:51739388-51739407 | MS.gene47435:intron | 20.0% |
| !!! | CATTTTCTTTATCTTTATCT+TGG | + | chr1.4:51739838-51739857 | None:intergenic | 20.0% |
| !!! | GGAATTGAATTTTCTTTTTT+TGG | - | chr1.4:51739878-51739897 | MS.gene47435:intron | 20.0% |
| !!! | GTGTAAGTTTTAAAAATAGA+GGG | - | chr1.4:51740197-51740216 | MS.gene47435:intron | 20.0% |
| !!! | TAATGATTTGCTAATGATTA+TGG | - | chr1.4:51739984-51740003 | MS.gene47435:intron | 20.0% |
| !!! | TATCTTTTTGATACTTATGT+TGG | + | chr1.4:51737732-51737751 | None:intergenic | 20.0% |
| !!! | TGTAAGTTTTAAAAATAGAG+GGG | - | chr1.4:51740198-51740217 | MS.gene47435:intron | 20.0% |
| ! | AAAGATAAAGAAAATGGGAA+GGG | - | chr1.4:51739842-51739861 | MS.gene47435:intron | 25.0% |
| ! | AATGAATCTGTGAATTAAGT+TGG | - | chr1.4:51740738-51740757 | MS.gene47435:intron | 25.0% |
| ! | ACGAAGAAAAAATTGCAATT+TGG | - | chr1.4:51739918-51739937 | MS.gene47435:intron | 25.0% |
| ! | AGAATAATTGGATGATGATA+TGG | - | chr1.4:51739942-51739961 | MS.gene47435:intron | 25.0% |
| ! | ATACTCGATAATTAATTCGT+TGG | - | chr1.4:51740963-51740982 | MS.gene47435:intron | 25.0% |
| ! | ATATAATTCTATCCGATTCT+AGG | + | chr1.4:51737183-51737202 | None:intergenic | 25.0% |
| ! | ATCAAGATACAAATATCGAT+CGG | + | chr1.4:51737848-51737867 | None:intergenic | 25.0% |
| ! | CAAAATTAACTGAGCATTAA+TGG | - | chr1.4:51740120-51740139 | MS.gene47435:intron | 25.0% |
| ! | CGAAGAAAAAATTGCAATTT+GGG | - | chr1.4:51739919-51739938 | MS.gene47435:intron | 25.0% |
| ! | CTTAATGATGTTAAGAGATA+AGG | + | chr1.4:51739329-51739348 | None:intergenic | 25.0% |
| ! | CTTGCTAGAAAATTTAAGAA+TGG | - | chr1.4:51739027-51739046 | MS.gene47435:intron | 25.0% |
| ! | GCATTATGATATGAAATGAT+GGG | + | chr1.4:51739465-51739484 | None:intergenic | 25.0% |
| ! | GGCATTAGAAGATTTATATT+TGG | + | chr1.4:51737037-51737056 | None:intergenic | 25.0% |
| ! | TAAAGATAAAGAAAATGGGA+AGG | - | chr1.4:51739841-51739860 | MS.gene47435:intron | 25.0% |
| ! | TAGTGTGATCTATTAAATCT+TGG | + | chr1.4:51738314-51738333 | None:intergenic | 25.0% |
| ! | TATAATTCTATCCGATTCTA+GGG | + | chr1.4:51737182-51737201 | None:intergenic | 25.0% |
| ! | TATATAGTAAACAAACCATC+CGG | + | chr1.4:51739570-51739589 | None:intergenic | 25.0% |
| ! | TGCATTATGATATGAAATGA+TGG | + | chr1.4:51739466-51739485 | None:intergenic | 25.0% |
| !! | AATATATCTTGCCTTTTGTT+TGG | + | chr1.4:51740834-51740853 | None:intergenic | 25.0% |
| !! | ACAATAATTTTCAGCTCATT+TGG | + | chr1.4:51741003-51741022 | None:intergenic | 25.0% |
| !! | AGATATGAAAGCATAAACAT+TGG | - | chr1.4:51738410-51738429 | MS.gene47435:intron | 25.0% |
| !! | ATTTGCTAATGATTATGGTT+TGG | - | chr1.4:51739989-51740008 | MS.gene47435:intron | 25.0% |
| !! | ATTTTATGAAAACTTAAGGG+AGG | + | chr1.4:51739293-51739312 | None:intergenic | 25.0% |
| !! | GATATGAAAGCATAAACATT+GGG | - | chr1.4:51738411-51738430 | MS.gene47435:intron | 25.0% |
| !! | TACATACTTCTTTTACCAAA+AGG | - | chr1.4:51740452-51740471 | MS.gene47435:intron | 25.0% |
| !! | TGCTTTTATCTAATGAAAGT+TGG | + | chr1.4:51741362-51741381 | None:intergenic | 25.0% |
| !! | TGTAGTACATAAATTGACTT+TGG | - | chr1.4:51737639-51737658 | MS.gene47435:CDS | 25.0% |
| !!! | AGTGTAAGTTTTAAAAATCG+AGG | + | chr1.4:51739268-51739287 | None:intergenic | 25.0% |
| !!! | AGTTTGACTTGATTAATTCA+CGG | - | chr1.4:51741054-51741073 | MS.gene47435:intron | 25.0% |
| !!! | CAAATTTACTGTTTTAACTG+TGG | - | chr1.4:51741382-51741401 | MS.gene47435:intron | 25.0% |
| !!! | CATTCTTAAATTTTCTAGCA+AGG | + | chr1.4:51739029-51739048 | None:intergenic | 25.0% |
| !!! | GTAAGTTTTAAAAATAGAGG+GGG | - | chr1.4:51740199-51740218 | MS.gene47435:intron | 25.0% |
| !!! | GTGTAAGTTTTAAAAATCGA+GGG | + | chr1.4:51739267-51739286 | None:intergenic | 25.0% |
| !!! | TGTAAGTTTTAAAAATCGAG+GGG | + | chr1.4:51739266-51739285 | None:intergenic | 25.0% |
| !!! | TGTCATTTTAATAAACCTCA+GGG | + | chr1.4:51739236-51739255 | None:intergenic | 25.0% |
| !!! | TGTGTTAAAAGAGGTTTTTT+TGG | - | chr1.4:51737120-51737139 | MS.gene47435:intron | 25.0% |
| !!! | TTTTGTTGTTGTGTTAAAAG+AGG | - | chr1.4:51737111-51737130 | MS.gene47435:intron | 25.0% |
| AAACTGTCCTTATCTGAATA+GGG | + | chr1.4:51741258-51741277 | None:intergenic | 30.0% | |
| AAATCACAACCAAATCGATA+TGG | + | chr1.4:51740481-51740500 | None:intergenic | 30.0% | |
| ACATTGGTGCAAAAAGAATT+TGG | + | chr1.4:51738186-51738205 | None:intergenic | 30.0% | |
| ACCACTAATTGAGTTTCTTT+GGG | - | chr1.4:51738475-51738494 | MS.gene47435:intron | 30.0% | |
| ACCATCAGACAAAAAACAAA+AGG | + | chr1.4:51740058-51740077 | None:intergenic | 30.0% | |
| ATCAATCGTACAATCATACA+TGG | + | chr1.4:51737159-51737178 | None:intergenic | 30.0% | |
| ATCTTGAATTGATCCTTTAG+AGG | - | chr1.4:51739625-51739644 | MS.gene47435:intron | 30.0% | |
| CATTTATATGTGAATGTCGT+AGG | - | chr1.4:51738118-51738137 | MS.gene47435:intron | 30.0% | |
| CCATCAGACAAAAAACAAAA+GGG | + | chr1.4:51740057-51740076 | None:intergenic | 30.0% | |
| CTATTAAACTCAACCTTTGT+TGG | - | chr1.4:51737894-51737913 | MS.gene47435:CDS | 30.0% | |
| CTCTAGTAATACAAATCGAA+AGG | + | chr1.4:51737229-51737248 | None:intergenic | 30.0% | |
| CTCTCATTAGACAAATCTAT+GGG | + | chr1.4:51736976-51736995 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAAGAGTAAT+AGG | - | chr1.4:51740787-51740806 | MS.gene47435:intron | 30.0% | |
| GTGAGCAAAATTTGTAAGAA+TGG | - | chr1.4:51738450-51738469 | MS.gene47435:intron | 30.0% | |
| TCAATCGTACAATCATACAT+GGG | + | chr1.4:51737158-51737177 | None:intergenic | 30.0% | |
| TCTCTCATTAGACAAATCTA+TGG | + | chr1.4:51736977-51736996 | None:intergenic | 30.0% | |
| TGTATGTCTCTATTGTTATG+TGG | + | chr1.4:51741450-51741469 | None:intergenic | 30.0% | |
| TTAAGATGCGAGAATTTCAT+TGG | + | chr1.4:51738361-51738380 | None:intergenic | 30.0% | |
| TTGAAAATGATTACCTTCCA+TGG | - | chr1.4:51740395-51740414 | MS.gene47435:intron | 30.0% | |
| TTGACTCAATAGAATTTGTC+CGG | + | chr1.4:51741103-51741122 | None:intergenic | 30.0% | |
| TTGCAATTTGGGAGAATAAT+TGG | - | chr1.4:51739930-51739949 | MS.gene47435:intron | 30.0% | |
| ! | ATGGAAGGTAATCATTTTCA+AGG | + | chr1.4:51740396-51740415 | None:intergenic | 30.0% |
| ! | GTTGGTGCTTTCTATAAAAT+TGG | - | chr1.4:51740616-51740635 | MS.gene47435:intron | 30.0% |
| ! | TGTTGCTATTAGAGTAATGA+TGG | + | chr1.4:51740701-51740720 | None:intergenic | 30.0% |
| ! | TGTTGTGTCATTCATTGATT+TGG | - | chr1.4:51741220-51741239 | MS.gene47435:intron | 30.0% |
| ! | TTCTTTTTCTTTCAGTTCCA+TGG | + | chr1.4:51740085-51740104 | None:intergenic | 30.0% |
| ! | TTGATAACTTGACGATAGTT+TGG | + | chr1.4:51737012-51737031 | None:intergenic | 30.0% |
| !! | AAACAGAAAACAATTTTGGC+CGG | - | chr1.4:51739392-51739411 | MS.gene47435:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr1.4:51738817-51738836 | MS.gene47435:intron | 30.0% |
| !! | AGGTAATCATTTTCAAGGTA+AGG | + | chr1.4:51740391-51740410 | None:intergenic | 30.0% |
| !! | GTCATTTTAATAAACCTCAG+GGG | + | chr1.4:51739235-51739254 | None:intergenic | 30.0% |
| !! | GTTTGACTTGATTAATTCAC+GGG | - | chr1.4:51741055-51741074 | MS.gene47435:intron | 30.0% |
| !! | TAAATGTTCTCTGAGATTAG+TGG | - | chr1.4:51738855-51738874 | MS.gene47435:intron | 30.0% |
| !! | TTGTGCTACTTTGTTTGAAT+GGG | + | chr1.4:51741488-51741507 | None:intergenic | 30.0% |
| !! | TTTTCAAGGTAAGGTACAAT+CGG | + | chr1.4:51740382-51740401 | None:intergenic | 30.0% |
| !!! | GTAAGTTTTAAAAATCGAGG+GGG | + | chr1.4:51739265-51739284 | None:intergenic | 30.0% |
| !!! | GTATGTTTTTCAATTTGCTG+AGG | - | chr1.4:51737952-51737971 | MS.gene47435:intron | 30.0% |
| !!! | GTGTCATTTTAATAAACCTC+AGG | + | chr1.4:51739237-51739256 | None:intergenic | 30.0% |
| !!! | GTTATATTTTAGTGTCTGAC+AGG | + | chr1.4:51737826-51737845 | None:intergenic | 30.0% |
| !!! | GTTGTTCTTTTGAAGTGATA+CGG | - | chr1.4:51739712-51739731 | MS.gene47435:intron | 30.0% |
| !!! | TGCCATTTTAATAAACCACA+GGG | - | chr1.4:51740228-51740247 | MS.gene47435:intron | 30.0% |
| !!! | TGGAACTCATTTTAGAGTTT+TGG | - | chr1.4:51738875-51738894 | MS.gene47435:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr1.4:51738583-51738602 | MS.gene47435:intron | 30.0% |
| AAAACAAAAGGGATCGTTGT+TGG | + | chr1.4:51740046-51740065 | None:intergenic | 35.0% | |
| AAAATGATTACCTTCCATGG+AGG | - | chr1.4:51740398-51740417 | MS.gene47435:intron | 35.0% | |
| AAATTCTCGCATCTTAAGTG+TGG | - | chr1.4:51738364-51738383 | MS.gene47435:intron | 35.0% | |
| AAGACTAAACTTCCACGATA+CGG | + | chr1.4:51737874-51737893 | None:intergenic | 35.0% | |
| AAGTGGAGTTGAACTTGATT+CGG | + | chr1.4:51741127-51741146 | None:intergenic | 35.0% | |
| AATGCCACTATCATCAATAG+AGG | - | chr1.4:51737051-51737070 | MS.gene47435:intron | 35.0% | |
| ACCCAAAGAAACTCAATTAG+TGG | + | chr1.4:51738479-51738498 | None:intergenic | 35.0% | |
| ACCTGAGAGAGAAAAGAATT+GGG | + | chr1.4:51740646-51740665 | None:intergenic | 35.0% | |
| ACTAATTGAGTTTCTTTGGG+TGG | - | chr1.4:51738478-51738497 | MS.gene47435:intron | 35.0% | |
| ATATAATCATCGTTCCTGAG+AGG | - | chr1.4:51739585-51739604 | MS.gene47435:intron | 35.0% | |
| ATATGACTTAGAGATGCACA+TGG | - | chr1.4:51740552-51740571 | MS.gene47435:intron | 35.0% | |
| ATCACTTCAAAAGAACAACG+AGG | + | chr1.4:51739711-51739730 | None:intergenic | 35.0% | |
| CAAACAACCCTATTCAGATA+AGG | - | chr1.4:51741248-51741267 | MS.gene47435:intron | 35.0% | |
| CAATACAATTTCTCAAGGCA+TGG | + | chr1.4:51739774-51739793 | None:intergenic | 35.0% | |
| CACCACTAATTGAGTTTCTT+TGG | - | chr1.4:51738474-51738493 | MS.gene47435:intron | 35.0% | |
| CATGTAAGTCCAAATCCTAA+GGG | - | chr1.4:51740577-51740596 | MS.gene47435:intron | 35.0% | |
| CCATCACAAATCCAAACAAA+AGG | - | chr1.4:51740820-51740839 | MS.gene47435:intron | 35.0% | |
| GAAACTGTCCTTATCTGAAT+AGG | + | chr1.4:51741259-51741278 | None:intergenic | 35.0% | |
| GATAATTAATTCGTTGGACG+TGG | - | chr1.4:51740969-51740988 | MS.gene47435:intron | 35.0% | |
| GGAGATATTATCATTAGAGC+GGG | + | chr1.4:51739444-51739463 | None:intergenic | 35.0% | |
| GGGAGATATTATCATTAGAG+CGG | + | chr1.4:51739445-51739464 | None:intergenic | 35.0% | |
| TACTTGCACTCTCTGTATTT+CGG | - | chr1.4:51739500-51739519 | MS.gene47435:intron | 35.0% | |
| TATGGTATACGTAGTAACGT+AGG | + | chr1.4:51737438-51737457 | None:intergenic | 35.0% | |
| TATTTCGGCAGCAAAATTCA+AGG | - | chr1.4:51739515-51739534 | MS.gene47435:intron | 35.0% | |
| TCACTTCAAAAGAACAACGA+GGG | + | chr1.4:51739710-51739729 | None:intergenic | 35.0% | |
| TCCCCTGTGGTTTATTAAAA+TGG | + | chr1.4:51740233-51740252 | None:intergenic | 35.0% | |
| TGAATGGGTAGTATTTGTGT+AGG | + | chr1.4:51741473-51741492 | None:intergenic | 35.0% | |
| TTCTTTGGGTGGTGATATTA+AGG | - | chr1.4:51738489-51738508 | MS.gene47435:intron | 35.0% | |
| TTGAACCTCACCAAAATTCA+AGG | - | chr1.4:51739539-51739558 | MS.gene47435:intron | 35.0% | |
| TTTAGTCCATATGGAATGGA+TGG | - | chr1.4:51740014-51740033 | MS.gene47435:intron | 35.0% | |
| ! | AAAAGGAGTCCATATCGATT+TGG | - | chr1.4:51740469-51740488 | MS.gene47435:intron | 35.0% |
| ! | AAATCGATATGGACTCCTTT+TGG | + | chr1.4:51740470-51740489 | None:intergenic | 35.0% |
| ! | ATCTTGTTTCCCTTAGGATT+TGG | + | chr1.4:51740589-51740608 | None:intergenic | 35.0% |
| ! | ATTAATGGTGTTAAGAGGGA+AGG | - | chr1.4:51740135-51740154 | MS.gene47435:intron | 35.0% |
| ! | CAACTTTTACCTTCTTGTCA+AGG | + | chr1.4:51740912-51740931 | None:intergenic | 35.0% |
| ! | GAGCATTAATGGTGTTAAGA+GGG | - | chr1.4:51740131-51740150 | MS.gene47435:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr1.4:51738713-51738732 | MS.gene47435:intron | 35.0% |
| ! | TGAGCATTAATGGTGTTAAG+AGG | - | chr1.4:51740130-51740149 | MS.gene47435:intron | 35.0% |
| ! | TGTCAATAAAACGGTGCTTT+TGG | - | chr1.4:51738518-51738537 | MS.gene47435:intron | 35.0% |
| ! | TGTGAATGTCGTAGGTATTT+TGG | - | chr1.4:51738126-51738145 | MS.gene47435:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1.4:51738717-51738736 | MS.gene47435:intron | 35.0% |
| ! | TTAATGGTGTTAAGAGGGAA+GGG | - | chr1.4:51740136-51740155 | MS.gene47435:intron | 35.0% |
| ! | TTTTCACCATCCATTCCATA+TGG | + | chr1.4:51740023-51740042 | None:intergenic | 35.0% |
| !! | AACAGAAAACAATTTTGGCC+GGG | - | chr1.4:51739393-51739412 | MS.gene47435:intron | 35.0% |
| !! | AATGTCGTAGGTATTTTGGA+GGG | - | chr1.4:51738130-51738149 | MS.gene47435:intron | 35.0% |
| !! | AGGTGGCTTTGTCAATAAAA+CGG | - | chr1.4:51738509-51738528 | MS.gene47435:intron | 35.0% |
| !! | ATTTTAATAAACCACAGGGG+AGG | - | chr1.4:51740232-51740251 | MS.gene47435:intron | 35.0% |
| !! | ATTTTAATAAACCTCAGGGG+AGG | + | chr1.4:51739232-51739251 | None:intergenic | 35.0% |
| !! | CCTTTTGTTTGGATTTGTGA+TGG | + | chr1.4:51740823-51740842 | None:intergenic | 35.0% |
| !! | GCCATTTTAATAAACCACAG+GGG | - | chr1.4:51740229-51740248 | MS.gene47435:intron | 35.0% |
| !! | GTTGTGCTACTTTGTTTGAA+TGG | + | chr1.4:51741489-51741508 | None:intergenic | 35.0% |
| !! | TCCAACAAACGTTTGACTTT+TGG | - | chr1.4:51738007-51738026 | MS.gene47435:intron | 35.0% |
| !! | TTATGTGCATGAGTTTTGTG+CGG | + | chr1.4:51737613-51737632 | None:intergenic | 35.0% |
| !!! | CCCTTTTGTTTTTTGTCTGA+TGG | - | chr1.4:51740054-51740073 | MS.gene47435:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | + | chr1.4:51738578-51738597 | None:intergenic | 35.0% |
| !!! | GTGCCATTTTAATAAACCAC+AGG | - | chr1.4:51740227-51740246 | MS.gene47435:intron | 35.0% |
| AATCTTGAATCGTCACGTTG+TGG | + | chr1.4:51740323-51740342 | None:intergenic | 40.0% | |
| ACCAAAATTCAAGGCCTTAC+CGG | - | chr1.4:51739548-51739567 | MS.gene47435:intron | 40.0% | |
| AGATGCGAGAATTTCATTGG+TGG | + | chr1.4:51738358-51738377 | None:intergenic | 40.0% | |
| AGTAAACAAACCATCCGGTA+AGG | + | chr1.4:51739565-51739584 | None:intergenic | 40.0% | |
| ATCTTGAATCGTCACGTTGT+GGG | + | chr1.4:51740322-51740341 | None:intergenic | 40.0% | |
| ATGAAGTGGTATGCCTCTAA+AGG | + | chr1.4:51739641-51739660 | None:intergenic | 40.0% | |
| CAATAGAGGCCATGATATTG+CGG | - | chr1.4:51737065-51737084 | MS.gene47435:intron | 40.0% | |
| CAATTGAAGAAGTTCCTCTC+AGG | + | chr1.4:51739602-51739621 | None:intergenic | 40.0% | |
| CACCTGAGAGAGAAAAGAAT+TGG | + | chr1.4:51740647-51740666 | None:intergenic | 40.0% | |
| CACTTCAAAAGAACAACGAG+GGG | + | chr1.4:51739709-51739728 | None:intergenic | 40.0% | |
| CCATTGATGGAATGTTCAGA+AGG | + | chr1.4:51738221-51738240 | None:intergenic | 40.0% | |
| CCTTCTGAACATTCCATCAA+TGG | - | chr1.4:51738218-51738237 | MS.gene47435:intron | 40.0% | |
| GATCATGCAAAACCATGAAG+TGG | + | chr1.4:51739655-51739674 | None:intergenic | 40.0% | |
| GCATGTAAGTCCAAATCCTA+AGG | - | chr1.4:51740576-51740595 | MS.gene47435:intron | 40.0% | |
| GCCAAAAGTCAAACGTTTGT+TGG | + | chr1.4:51738011-51738030 | None:intergenic | 40.0% | |
| GGAAGAAGACATAAAGCACA+TGG | - | chr1.4:51740759-51740778 | MS.gene47435:intron | 40.0% | |
| GGCATTTAGTCCATATGGAA+TGG | - | chr1.4:51740010-51740029 | MS.gene47435:intron | 40.0% | |
| GGTTTGGCATTTAGTCCATA+TGG | - | chr1.4:51740005-51740024 | MS.gene47435:intron | 40.0% | |
| GTACGATTGATCCCTAGAAT+CGG | - | chr1.4:51737168-51737187 | MS.gene47435:CDS | 40.0% | |
| TAAGGGAAACAAGATTGCTG+TGG | - | chr1.4:51740594-51740613 | MS.gene47435:intron | 40.0% | |
| TACATACTTCCTGCCATTGA+TGG | + | chr1.4:51738234-51738253 | None:intergenic | 40.0% | |
| TCTAGCAAGGAAGTCAACTA+AGG | + | chr1.4:51739016-51739035 | None:intergenic | 40.0% | |
| TGGATGATGACACAACTAGT+AGG | + | chr1.4:51737991-51738010 | None:intergenic | 40.0% | |
| TTAAACCCGGCTGCATTTAT+TGG | - | chr1.4:51737395-51737414 | MS.gene47435:intron | 40.0% | |
| TTTGGGTGGTGATATTAAGG+TGG | - | chr1.4:51738492-51738511 | MS.gene47435:intron | 40.0% | |
| ! | AAGCACAAGTGGATCTTTTG+AGG | - | chr1.4:51741281-51741300 | MS.gene47435:intron | 40.0% |
| ! | ACAGCAATCTTGTTTCCCTT+AGG | + | chr1.4:51740595-51740614 | None:intergenic | 40.0% |
| ! | ATGGCCTCTATTGATGATAG+TGG | + | chr1.4:51737058-51737077 | None:intergenic | 40.0% |
| ! | CAATAAAACGGTGCTTTTGG+TGG | - | chr1.4:51738521-51738540 | MS.gene47435:intron | 40.0% |
| ! | GAAAGCATAAACATTGGGTG+TGG | - | chr1.4:51738416-51738435 | MS.gene47435:intron | 40.0% |
| ! | GACAGTTTCAAAAGCACAAG+TGG | - | chr1.4:51741270-51741289 | MS.gene47435:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1.4:51738716-51738735 | MS.gene47435:intron | 40.0% |
| ! | TCCCAATTCTTTTCTCTCTC+AGG | - | chr1.4:51740642-51740661 | MS.gene47435:intron | 40.0% |
| ! | TCTTTTTGCACCAATGTCAC+TGG | - | chr1.4:51738189-51738208 | MS.gene47435:intron | 40.0% |
| ! | TTTAGAGGCATACCACTTCA+TGG | - | chr1.4:51739640-51739659 | MS.gene47435:intron | 40.0% |
| !! | AGTCAACTAAGGTTGGTACT+TGG | + | chr1.4:51739005-51739024 | None:intergenic | 40.0% |
| !! | ATGTCGTAGGTATTTTGGAG+GGG | - | chr1.4:51738131-51738150 | MS.gene47435:intron | 40.0% |
| !! | GAAAATGGGAAGGGTTTTGT+TGG | - | chr1.4:51739851-51739870 | MS.gene47435:intron | 40.0% |
| !! | GAATGTCGTAGGTATTTTGG+AGG | - | chr1.4:51738129-51738148 | MS.gene47435:intron | 40.0% |
| !! | TAAGGCCTTGAATTTTGGTG+AGG | + | chr1.4:51739547-51739566 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | + | chr1.4:51738579-51738598 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.4:51738821-51738840 | MS.gene47435:intron | 40.0% |
| AAATTCAAGGCCTTACCGGA+TGG | - | chr1.4:51739552-51739571 | MS.gene47435:intron | 45.0% | |
| AAGCTGTCAAAACTGCAACC+CGG | + | chr1.4:51739414-51739433 | None:intergenic | 45.0% | |
| AATTACAATCACCTCCCCTG+AGG | - | chr1.4:51739218-51739237 | MS.gene47435:intron | 45.0% | |
| AATTACAATCACCTCCCCTG+TGG | + | chr1.4:51739237-51739218 | None:intergenic | 45.0% | |
| AGCATGCAGAGATGAATGCA+AGG | - | chr1.4:51741415-51741434 | MS.gene47435:CDS | 45.0% | |
| CATGTCCAATAAATGCAGCC+GGG | + | chr1.4:51737403-51737422 | None:intergenic | 45.0% | |
| CATGTGGAACCTTGACAAGA+AGG | - | chr1.4:51740900-51740919 | MS.gene47435:intron | 45.0% | |
| CTATTGTTATGTGGCTGCCT+TGG | + | chr1.4:51741441-51741460 | None:intergenic | 45.0% | |
| CTGAACATTCCATCAATGGC+AGG | - | chr1.4:51738222-51738241 | MS.gene47435:intron | 45.0% | |
| GCAAGGAAGTCAACTAAGGT+TGG | + | chr1.4:51739012-51739031 | None:intergenic | 45.0% | |
| GCATGTCCAATAAATGCAGC+CGG | + | chr1.4:51737404-51737423 | None:intergenic | 45.0% | |
| GGAAACAAGATTGCTGTGGT+TGG | - | chr1.4:51740598-51740617 | MS.gene47435:intron | 45.0% | |
| GTATGCTCACCGCAATATCA+TGG | + | chr1.4:51737077-51737096 | None:intergenic | 45.0% | |
| TATGCAGCAGAGCAAAGCTT+GGG | + | chr1.4:51737678-51737697 | None:intergenic | 45.0% | |
| TTATGCAGCAGAGCAAAGCT+TGG | + | chr1.4:51737679-51737698 | None:intergenic | 45.0% | |
| TTTCTTGCACGTTTCCTCCA+TGG | + | chr1.4:51740415-51740434 | None:intergenic | 45.0% | |
| ! | ACTCGAGTTGTGTATTGAGC+CGG | - | chr1.4:51741081-51741100 | MS.gene47435:intron | 45.0% |
| ! | GCTGGCTCAATACGTATCAA+TGG | - | chr1.4:51738158-51738177 | MS.gene47435:intron | 45.0% |
| ! | TATCTTGATTCGCCGTATCG+TGG | - | chr1.4:51737859-51737878 | MS.gene47435:CDS | 45.0% |
| ! | TCCGGTAAGGCCTTGAATTT+TGG | + | chr1.4:51739552-51739571 | None:intergenic | 45.0% |
| ! | TTTGTCTGATGGTGTGACCA+TGG | - | chr1.4:51740065-51740084 | MS.gene47435:intron | 45.0% |
| !!! | ACAAGTGGATCTTTTGAGGC+AGG | - | chr1.4:51741285-51741304 | MS.gene47435:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1.4:51738820-51738839 | MS.gene47435:intron | 45.0% |
| !!! | TCTTTTTAAATAAAAAAATT+AGG | - | chr1.4:51738277-51738296 | MS.gene47435:intron | 5.0% |
| AAGGCTGAGCACGAATCAAG+TGG | + | chr1.4:51741144-51741163 | None:intergenic | 50.0% | |
| ACAACTCCTCCTTGCACTGA+AGG | - | chr1.4:51740874-51740893 | MS.gene47435:intron | 50.0% | |
| ATGACACCTTCAGTGCAAGG+AGG | + | chr1.4:51740883-51740902 | None:intergenic | 50.0% | |
| CACATGACACCTTCAGTGCA+AGG | + | chr1.4:51740886-51740905 | None:intergenic | 50.0% | |
| CAGAGATGAATGCAAGGCCA+AGG | - | chr1.4:51741421-51741440 | MS.gene47435:CDS | 50.0% | |
| TTGCACGTTTCCTCCATGGA+AGG | + | chr1.4:51740411-51740430 | None:intergenic | 50.0% | |
| !! | AAGGAGAGTGCCAGTGACAT+TGG | + | chr1.4:51738202-51738221 | None:intergenic | 50.0% |
| !! | CTTGCACTGAAGGTGTCATG+TGG | - | chr1.4:51740884-51740903 | MS.gene47435:intron | 50.0% |
| !! | GTATTTTGGAGGGGTGATGC+TGG | - | chr1.4:51738140-51738159 | MS.gene47435:intron | 50.0% |
| !!! | GGGAAGGGTTTTGTTGGAGA+TGG | - | chr1.4:51739857-51739876 | MS.gene47435:intron | 50.0% |
| CAGCAGAGCAAAGCTTGGGA+TGG | + | chr1.4:51737674-51737693 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 51736964 | 51741518 | 51736964 | ID=MS.gene47435 |
| chr1.4 | mRNA | 51736964 | 51741518 | 51736964 | ID=MS.gene47435.t1;Parent=MS.gene47435 |
| chr1.4 | exon | 51741396 | 51741518 | 51741396 | ID=MS.gene47435.t1.exon1;Parent=MS.gene47435.t1 |
| chr1.4 | CDS | 51741396 | 51741518 | 51741396 | ID=cds.MS.gene47435.t1;Parent=MS.gene47435.t1 |
| chr1.4 | exon | 51740236 | 51740342 | 51740236 | ID=MS.gene47435.t1.exon2;Parent=MS.gene47435.t1 |
| chr1.4 | CDS | 51740236 | 51740342 | 51740236 | ID=cds.MS.gene47435.t1;Parent=MS.gene47435.t1 |
| chr1.4 | exon | 51737819 | 51737930 | 51737819 | ID=MS.gene47435.t1.exon3;Parent=MS.gene47435.t1 |
| chr1.4 | CDS | 51737819 | 51737930 | 51737819 | ID=cds.MS.gene47435.t1;Parent=MS.gene47435.t1 |
| chr1.4 | exon | 51737561 | 51737725 | 51737561 | ID=MS.gene47435.t1.exon4;Parent=MS.gene47435.t1 |
| chr1.4 | CDS | 51737561 | 51737725 | 51737561 | ID=cds.MS.gene47435.t1;Parent=MS.gene47435.t1 |
| chr1.4 | exon | 51737164 | 51737217 | 51737164 | ID=MS.gene47435.t1.exon5;Parent=MS.gene47435.t1 |
| chr1.4 | CDS | 51737164 | 51737217 | 51737164 | ID=cds.MS.gene47435.t1;Parent=MS.gene47435.t1 |
| chr1.4 | exon | 51736964 | 51737065 | 51736964 | ID=MS.gene47435.t1.exon6;Parent=MS.gene47435.t1 |
| chr1.4 | CDS | 51736964 | 51737065 | 51736964 | ID=cds.MS.gene47435.t1;Parent=MS.gene47435.t1 |
| Gene Sequence |
| Protein sequence |
