Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48237.t1 | XP_024638078.1 | 98.4 | 372 | 6 | 0 | 1 | 372 | 1 | 372 | 1.40E-221 | 778.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48237.t1 | Q9SLN5 | 82.0 | 373 | 66 | 1 | 1 | 372 | 1 | 373 | 7.2e-190 | 664.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48237.t1 | A0A396I104 | 98.4 | 372 | 6 | 0 | 1 | 372 | 1 | 372 | 1.0e-221 | 778.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93798 | MS.gene48237 | PPI |
| MS.gene033096 | MS.gene48237 | PPI |
| MS.gene58403 | MS.gene48237 | PPI |
| MS.gene40160 | MS.gene48237 | PPI |
| MS.gene93411 | MS.gene48237 | PPI |
| MS.gene064281 | MS.gene48237 | PPI |
| MS.gene044411 | MS.gene48237 | PPI |
| MS.gene91353 | MS.gene48237 | PPI |
| MS.gene028573 | MS.gene48237 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48237.t1 | MTR_5g017630 | 49.084 | 273 | 133 | 2 | 100 | 372 | 73 | 339 | 8.71e-87 | 266 |
| MS.gene48237.t1 | MTR_5g053940 | 46.520 | 273 | 140 | 2 | 100 | 372 | 78 | 344 | 9.08e-81 | 251 |
| MS.gene48237.t1 | MTR_5g053940 | 46.520 | 273 | 140 | 2 | 100 | 372 | 54 | 320 | 1.04e-80 | 250 |
| MS.gene48237.t1 | MTR_5g017630 | 48.101 | 237 | 117 | 2 | 100 | 336 | 73 | 303 | 9.53e-71 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48237.t1 | AT2G45240 | 82.038 | 373 | 66 | 1 | 1 | 372 | 1 | 373 | 0.0 | 656 |
| MS.gene48237.t1 | AT2G45240 | 80.062 | 321 | 63 | 1 | 1 | 320 | 1 | 321 | 0.0 | 555 |
| MS.gene48237.t1 | AT1G13270 | 48.134 | 268 | 133 | 2 | 105 | 372 | 96 | 357 | 1.30e-87 | 269 |
| MS.gene48237.t1 | AT4G37040 | 49.451 | 273 | 132 | 3 | 100 | 372 | 72 | 338 | 8.40e-85 | 261 |
| MS.gene48237.t1 | AT3G25740 | 44.280 | 271 | 140 | 4 | 105 | 372 | 69 | 331 | 1.89e-75 | 237 |
| MS.gene48237.t1 | AT1G13270 | 44.560 | 193 | 102 | 1 | 105 | 297 | 96 | 283 | 2.46e-54 | 181 |
| MS.gene48237.t1 | AT3G25740 | 42.500 | 120 | 60 | 2 | 105 | 222 | 69 | 181 | 1.08e-22 | 96.3 |
Find 104 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTACGTGCAGCAAGATTT+TGG | 0.169908 | 4.2:-77555318 | None:intergenic |
| AGCTTCAATTCCATGCATTT+TGG | 0.176635 | 4.2:-77552183 | None:intergenic |
| CCCGTGAAGGTTCAGCATTC+TGG | 0.261703 | 4.2:+77552208 | MS.gene48237:CDS |
| GCACCAAACATTCCTCATTA+TGG | 0.269416 | 4.2:+77556915 | MS.gene48237:CDS |
| ATAACTATTGGGCTCATCTT+TGG | 0.289295 | 4.2:-77554256 | None:intergenic |
| CAAAGCTTCCTTACTTTGAT+TGG | 0.291250 | 4.2:+77553745 | MS.gene48237:CDS |
| AATACATACTGAAGATTTGC+AGG | 0.300572 | 4.2:-77551473 | None:intergenic |
| GACAATCCGTTTACCAGATA+TGG | 0.303126 | 4.2:-77554028 | None:intergenic |
| TCAATTTGAGCACACTCTTT+TGG | 0.319092 | 4.2:+77557506 | MS.gene48237:CDS |
| CTCATTCTTTCGATCTGGTC+TGG | 0.334220 | 4.2:-77554408 | None:intergenic |
| TCATATTGTGGTCATGGAAT+TGG | 0.341090 | 4.2:+77556876 | MS.gene48237:CDS |
| CATATACCTGCATTGATCAT+TGG | 0.342192 | 4.2:-77557346 | None:intergenic |
| TAACTATTGGGCTCATCTTT+GGG | 0.350866 | 4.2:-77554255 | None:intergenic |
| CTTCCATAATGAGGAATGTT+TGG | 0.353164 | 4.2:-77556918 | None:intergenic |
| AGTATGCTGAAGATAACTAT+TGG | 0.372630 | 4.2:-77554268 | None:intergenic |
| CGTTTACCAGATATGGGATA+TGG | 0.372750 | 4.2:-77554021 | None:intergenic |
| TTTCTCTCATTCTTTCGATC+TGG | 0.374646 | 4.2:-77554413 | None:intergenic |
| CTCATATTGCTATACCTGAT+TGG | 0.383744 | 4.2:+77554055 | MS.gene48237:CDS |
| ATACTGAAGATTTGCAGGTT+TGG | 0.398456 | 4.2:-77551468 | None:intergenic |
| CCATCAAATTCAGTTAAACC+TGG | 0.407508 | 4.2:+77556667 | MS.gene48237:intron |
| AGCACAAGAGAGTTTATTAA+CGG | 0.409837 | 4.2:-77551438 | None:intergenic |
| GTGTACTATAAAGGTGTTCA+TGG | 0.410468 | 4.2:+77555895 | MS.gene48237:CDS |
| CTTCCTTACTTTGATTGGAC+TGG | 0.410698 | 4.2:+77553750 | MS.gene48237:CDS |
| CAATCAAAGTAAGGAAGCTT+TGG | 0.411005 | 4.2:-77553744 | None:intergenic |
| AACCGTCATGCTTCAATGTC+AGG | 0.423263 | 4.2:+77556721 | MS.gene48237:CDS |
| TGATAACTTCACCGATTTCA+CGG | 0.429676 | 4.2:-77556699 | None:intergenic |
| GTGCGGCCATATCCCATATC+TGG | 0.431336 | 4.2:+77554015 | MS.gene48237:CDS |
| GTATGCTGAAGATAACTATT+GGG | 0.447741 | 4.2:-77554267 | None:intergenic |
| CACATATGAGTGCTTGGATA+AGG | 0.447878 | 4.2:+77556061 | MS.gene48237:CDS |
| CTCACATCATCAGCCCAATC+AGG | 0.450396 | 4.2:-77554069 | None:intergenic |
| TCATATTGCTATACCTGATT+GGG | 0.457094 | 4.2:+77554056 | MS.gene48237:CDS |
| CATATCCCATATCTGGTAAA+CGG | 0.459117 | 4.2:+77554022 | MS.gene48237:CDS |
| TTCCTTACTTTGATTGGACT+GGG | 0.461313 | 4.2:+77553751 | MS.gene48237:CDS |
| GGGGTACGGTTCCGTGAAAT+CGG | 0.473006 | 4.2:+77556688 | MS.gene48237:CDS |
| CCAGAATGCTGAACCTTCAC+GGG | 0.473253 | 4.2:-77552208 | None:intergenic |
| TCTCAATGATACATACTTTG+TGG | 0.473493 | 4.2:+77556001 | MS.gene48237:CDS |
| GATCATTGGCTCAATTGTAA+AGG | 0.475520 | 4.2:-77557332 | None:intergenic |
| CTCAATGATACATACTTTGT+GGG | 0.479150 | 4.2:+77556002 | MS.gene48237:CDS |
| ACCAGAATGCTGAACCTTCA+CGG | 0.479986 | 4.2:-77552209 | None:intergenic |
| TACCCAGTCCAATCAAAGTA+AGG | 0.487570 | 4.2:-77553753 | None:intergenic |
| GTAAAATCATATTGTGGTCA+TGG | 0.489624 | 4.2:+77556870 | MS.gene48237:CDS |
| ACAATCCGTTTACCAGATAT+GGG | 0.495773 | 4.2:-77554027 | None:intergenic |
| AAATGGTAATTGAGAGTCGA+TGG | 0.498268 | 4.2:-77555291 | None:intergenic |
| GTAGATTGGAAGGGAGGTGT+TGG | 0.501126 | 4.2:+77555001 | MS.gene48237:intron |
| AGATTGATCTACCTTGCATC+AGG | 0.507996 | 4.2:-77555450 | None:intergenic |
| CATCAAATTCAGTTAAACCT+GGG | 0.510808 | 4.2:+77556668 | MS.gene48237:intron |
| TCAGGTATAGCAATATGAGC+TGG | 0.510937 | 4.2:-77554051 | None:intergenic |
| CACGAGGCAACTATTGCTGC+AGG | 0.513450 | 4.2:+77555083 | MS.gene48237:CDS |
| CTGGCGTGATCGACTGTGGC+CGG | 0.519748 | 4.2:+77557443 | MS.gene48237:CDS |
| GTTAATGAAGTTATCTGCCA+TGG | 0.522636 | 4.2:+77555423 | MS.gene48237:CDS |
| GATGTTACTGTGTACTATAA+AGG | 0.523128 | 4.2:+77555886 | MS.gene48237:CDS |
| TCTCAGGTGTCCAAAATGCA+TGG | 0.531717 | 4.2:+77552173 | MS.gene48237:intron |
| ATCGACTGTGGCCGGATGGA+TGG | 0.541522 | 4.2:+77557451 | MS.gene48237:CDS |
| AAGAATGAGAGAAACATGTC+GGG | 0.542497 | 4.2:+77554422 | MS.gene48237:CDS |
| TGATTCGTAGATTGGAAGGG+AGG | 0.546142 | 4.2:+77554995 | MS.gene48237:intron |
| GCCATGGAATTCCTGATGCA+AGG | 0.548278 | 4.2:+77555439 | MS.gene48237:CDS |
| GCCGCTCGGATTATTCAGCC+TGG | 0.550022 | 4.2:+77555029 | MS.gene48237:CDS |
| AAATTGATTCGTAGATTGGA+AGG | 0.550438 | 4.2:+77554991 | MS.gene48237:intron |
| ATTCAGTTAAACCTGGGGTA+CGG | 0.555886 | 4.2:+77556674 | MS.gene48237:intron |
| CAAATGCACATATGAGTGCT+TGG | 0.558213 | 4.2:+77556055 | MS.gene48237:CDS |
| AGGTGTTGGATGCAGCCGCT+CGG | 0.560148 | 4.2:+77555015 | MS.gene48237:CDS |
| GTCATTCTACAGGAAGCTTG+AGG | 0.564322 | 4.2:+77555843 | MS.gene48237:intron |
| TAAAGCAGTTGGTGTGATGA+AGG | 0.565699 | 4.2:+77557300 | MS.gene48237:CDS |
| ATTGAGCCAATGATCAATGC+AGG | 0.566962 | 4.2:+77557340 | MS.gene48237:CDS |
| ATTTCACGGAACCGTACCCC+AGG | 0.568344 | 4.2:-77556685 | None:intergenic |
| TTGGATAAGGCAATATCCAT+TGG | 0.569824 | 4.2:+77556074 | MS.gene48237:CDS |
| GTAACATCAGTCCATCCATC+CGG | 0.570192 | 4.2:-77557462 | None:intergenic |
| CAGGTATAGCAATATGAGCT+GGG | 0.571387 | 4.2:-77554050 | None:intergenic |
| GGTTATACTGCGTGAAGAGA+GGG | 0.572210 | 4.2:+77553709 | MS.gene48237:CDS |
| CAGACTCACTTGGTGAAGGA+TGG | 0.573116 | 4.2:+77553688 | MS.gene48237:CDS |
| CAAAGGATACTTCCATAATG+AGG | 0.573541 | 4.2:-77556927 | None:intergenic |
| TGGTTATACTGCGTGAAGAG+AGG | 0.579697 | 4.2:+77553708 | MS.gene48237:CDS |
| GCACAGAACTCAGACTCACT+TGG | 0.583214 | 4.2:+77553678 | MS.gene48237:CDS |
| AAGGCAAAGGTATCCTCAGT+TGG | 0.584987 | 4.2:+77553654 | MS.gene48237:CDS |
| CGTGATCGACTGTGGCCGGA+TGG | 0.586768 | 4.2:+77557447 | MS.gene48237:CDS |
| ATTTCATCAGTTGTCACACC+AGG | 0.591424 | 4.2:-77555047 | None:intergenic |
| AACTCAGACTCACTTGGTGA+AGG | 0.594385 | 4.2:+77553684 | MS.gene48237:CDS |
| TTCTACAGGAAGCTTGAGGA+TGG | 0.596903 | 4.2:+77555847 | MS.gene48237:intron |
| AATTGATTCGTAGATTGGAA+GGG | 0.597055 | 4.2:+77554992 | MS.gene48237:intron |
| TACTGCGTGAAGAGAGGGCA+GGG | 0.598888 | 4.2:+77553714 | MS.gene48237:CDS |
| GCAGTTGGTGTGATGAAGGC+TGG | 0.599210 | 4.2:+77557304 | MS.gene48237:CDS |
| TTATCTTCAGCATACTGTTG+AGG | 0.599339 | 4.2:+77554275 | MS.gene48237:CDS |
| AAAGAATGAGAGAAACATGT+CGG | 0.599956 | 4.2:+77554421 | MS.gene48237:CDS |
| ATACTGCGTGAAGAGAGGGC+AGG | 0.604163 | 4.2:+77553713 | MS.gene48237:CDS |
| ATCAGTACATCTGAAGGCAA+AGG | 0.605680 | 4.2:+77553641 | MS.gene48237:CDS |
| TACATACTTTGTGGGAAATG+TGG | 0.607592 | 4.2:+77556010 | MS.gene48237:CDS |
| TGGACTGATGTTACAGCAGA+TGG | 0.608343 | 4.2:+77557471 | MS.gene48237:CDS |
| AATGGTAATTGAGAGTCGAT+GGG | 0.615386 | 4.2:-77555290 | None:intergenic |
| GCACAAATCAGTACATCTGA+AGG | 0.616763 | 4.2:+77553635 | MS.gene48237:CDS |
| GGATGAAGAATCTCGTCAGT+TGG | 0.618217 | 4.2:+77556031 | MS.gene48237:CDS |
| TGAGTTCTGTGCGCCAACTG+AGG | 0.619133 | 4.2:-77553667 | None:intergenic |
| CTGGCAGGAAATAAAGCAGT+TGG | 0.619503 | 4.2:+77557289 | MS.gene48237:intron |
| ATCAAATTCAGTTAAACCTG+GGG | 0.629840 | 4.2:+77556669 | MS.gene48237:intron |
| GAATTGAAGCTTCCCCGTGA+AGG | 0.631728 | 4.2:+77552195 | MS.gene48237:CDS |
| ACCTTGCATCAGGAATTCCA+TGG | 0.647124 | 4.2:-77555440 | None:intergenic |
| GAGGAATGTTTGGTGCACAA+TGG | 0.651672 | 4.2:-77556908 | None:intergenic |
| TTACAGGTAAAATCATATTG+TGG | 0.652206 | 4.2:+77556864 | MS.gene48237:intron |
| AGCCTGACATTGAAGCATGA+CGG | 0.653252 | 4.2:-77556723 | None:intergenic |
| GTGTCTGGCGTGATCGACTG+TGG | 0.700621 | 4.2:+77557439 | MS.gene48237:CDS |
| TTCAATGTCAGGCTTCTCAG+TGG | 0.705409 | 4.2:+77556732 | MS.gene48237:CDS |
| CTGCTCTTGCAAGGGCAGTG+CGG | 0.706767 | 4.2:+77553998 | MS.gene48237:intron |
| CAGAATGCTGAACCTTCACG+GGG | 0.712930 | 4.2:-77552207 | None:intergenic |
| ACCAGGCTGAATAATCCGAG+CGG | 0.746152 | 4.2:-77555030 | None:intergenic |
| AATTGACAGAGTAGTTCACG+AGG | 0.767513 | 4.2:+77555067 | MS.gene48237:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATAATTTATATGATA+AGG | - | chr4.2:77552551-77552570 | None:intergenic | 10.0% |
| !!! | AAATATATACAATTTTAAAC+CGG | + | chr4.2:77555688-77555707 | MS.gene48237:intron | 10.0% |
| !!! | AATGTTTTTTTTCAATATTA+TGG | + | chr4.2:77552481-77552500 | MS.gene48237:intron | 10.0% |
| !! | AAAACTTGAATATAAATTAC+AGG | + | chr4.2:77556297-77556316 | MS.gene48237:intron | 15.0% |
| !! | AAAATTAATTGACAACATTA+TGG | - | chr4.2:77555741-77555760 | None:intergenic | 15.0% |
| !! | ATTGATATCTTTCATATATT+CGG | + | chr4.2:77553554-77553573 | MS.gene48237:intron | 15.0% |
| !! | TCAATAATGATTTAAGAAAA+TGG | + | chr4.2:77553151-77553170 | MS.gene48237:intron | 15.0% |
| !!! | AAGAAAAACTATGTTTTTTT+AGG | + | chr4.2:77554853-77554872 | MS.gene48237:intron | 15.0% |
| !!! | AATGAACAAAAGTTTTTAAT+AGG | + | chr4.2:77557417-77557436 | MS.gene48237:intron | 15.0% |
| !!! | AATTGACAATAAACTTTTAA+GGG | - | chr4.2:77556211-77556230 | None:intergenic | 15.0% |
| !!! | AGGTAGTATAATTTTTTTTA+TGG | - | chr4.2:77556421-77556440 | None:intergenic | 15.0% |
| !!! | ATTATCTTTTAGAGATTTTA+GGG | + | chr4.2:77552338-77552357 | MS.gene48237:intron | 15.0% |
| !!! | ATTATTTTTTATCTCTTCTT+AGG | + | chr4.2:77554227-77554246 | MS.gene48237:intron | 15.0% |
| !!! | CATTTTTATTTTACTGTTTT+CGG | - | chr4.2:77552465-77552484 | None:intergenic | 15.0% |
| !!! | GAATTTTGTTATTGTTATTT+TGG | + | chr4.2:77551517-77551536 | MS.gene48237:intron | 15.0% |
| !!! | TATTATCTTTTAGAGATTTT+AGG | + | chr4.2:77552337-77552356 | MS.gene48237:intron | 15.0% |
| !!! | TTATTTTTTATCTCTTCTTA+GGG | + | chr4.2:77554228-77554247 | MS.gene48237:intron | 15.0% |
| !! | AATTAATATCAGTTAGAAAG+TGG | - | chr4.2:77554374-77554393 | None:intergenic | 20.0% |
| !! | ACAATAACAAAATTCAAGAA+TGG | - | chr4.2:77551512-77551531 | None:intergenic | 20.0% |
| !! | AGATAACAAAATGAAAACAA+AGG | - | chr4.2:77552428-77552447 | None:intergenic | 20.0% |
| !! | AGATTTATATCTTACGATTT+AGG | - | chr4.2:77556265-77556284 | None:intergenic | 20.0% |
| !! | ATAACAAAATGAAAACAAAG+GGG | - | chr4.2:77552426-77552445 | None:intergenic | 20.0% |
| !! | ATATATAATCTGCAACAAAT+GGG | - | chr4.2:77557053-77557072 | None:intergenic | 20.0% |
| !! | GAGAAATTCTAAATTTGAAA+AGG | - | chr4.2:77555814-77555833 | None:intergenic | 20.0% |
| !! | GATAACAAAATGAAAACAAA+GGG | - | chr4.2:77552427-77552446 | None:intergenic | 20.0% |
| !! | GATTTATATCTTACGATTTA+GGG | - | chr4.2:77556264-77556283 | None:intergenic | 20.0% |
| !! | TATATATAATCTGCAACAAA+TGG | - | chr4.2:77557054-77557073 | None:intergenic | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | + | chr4.2:77556469-77556488 | MS.gene48237:intron | 20.0% |
| !! | TTTAGTATTTGATAAAAGGA+AGG | - | chr4.2:77557552-77557571 | None:intergenic | 20.0% |
| !! | TTTGTAGGCAATTATAAAAT+GGG | + | chr4.2:77552292-77552311 | MS.gene48237:intron | 20.0% |
| !!! | AAATAAAATTTGGTTTTAGC+TGG | - | chr4.2:77553978-77553997 | None:intergenic | 20.0% |
| !!! | AACAGATTGATTTAGTTATT+AGG | + | chr4.2:77553367-77553386 | MS.gene48237:intron | 20.0% |
| !!! | AATAAAATTTGGTTTTAGCT+GGG | - | chr4.2:77553977-77553996 | None:intergenic | 20.0% |
| !!! | ACACTTTAAAATCGTAAAAT+TGG | + | chr4.2:77555950-77555969 | MS.gene48237:intron | 20.0% |
| !!! | ACAGATTGATTTAGTTATTA+GGG | + | chr4.2:77553368-77553387 | MS.gene48237:intron | 20.0% |
| !!! | ATTTGAAGTTCCTTTTATTT+TGG | + | chr4.2:77552259-77552278 | MS.gene48237:intron | 20.0% |
| !!! | GAATTGACAATAAACTTTTA+AGG | - | chr4.2:77556212-77556231 | None:intergenic | 20.0% |
| !!! | GTTCCTTTCTTTTAATATAA+TGG | + | chr4.2:77556976-77556995 | MS.gene48237:intron | 20.0% |
| !!! | GTTTTGCAATTAAATAAAAC+TGG | - | chr4.2:77552401-77552420 | None:intergenic | 20.0% |
| !!! | TATGTGTTTGATTTTAACTT+TGG | + | chr4.2:77552129-77552148 | MS.gene48237:intron | 20.0% |
| !!! | TCATTTAAGTTGATTGTAAT+AGG | + | chr4.2:77552761-77552780 | MS.gene48237:intron | 20.0% |
| !!! | TTAAGTTGTTTATCAAAACA+AGG | - | chr4.2:77552507-77552526 | None:intergenic | 20.0% |
| !!! | TTACGATTTTAAAGTGTAAA+GGG | - | chr4.2:77555947-77555966 | None:intergenic | 20.0% |
| !!! | TTATCTCTTAATTTGATTGT+AGG | + | chr4.2:77551744-77551763 | MS.gene48237:intron | 20.0% |
| !!! | TTCAATAATTTGAAATTTGC+AGG | + | chr4.2:77555261-77555280 | MS.gene48237:intron | 20.0% |
| !!! | TTGTTTTGATAGTTTAACAA+TGG | + | chr4.2:77552050-77552069 | MS.gene48237:intron | 20.0% |
| !!! | TTTAACAATGGATTGTTTAT+GGG | + | chr4.2:77552062-77552081 | MS.gene48237:intron | 20.0% |
| !!! | TTTACGATTTTAAAGTGTAA+AGG | - | chr4.2:77555948-77555967 | None:intergenic | 20.0% |
| ! | AACAATGAAATACATACAGA+AGG | - | chr4.2:77555349-77555368 | None:intergenic | 25.0% |
| ! | AATACTAGATCAAACATCAA+AGG | - | chr4.2:77556947-77556966 | None:intergenic | 25.0% |
| ! | AATTTGATTGTAGGCAATTT+GGG | + | chr4.2:77551753-77551772 | MS.gene48237:intron | 25.0% |
| ! | ACAATCACTAACTTAACATT+TGG | + | chr4.2:77556395-77556414 | MS.gene48237:intron | 25.0% |
| ! | ACAATTATCCATTATCTCTT+GGG | - | chr4.2:77552979-77552998 | None:intergenic | 25.0% |
| ! | ACATTAATGTTCTTAAACCT+TGG | - | chr4.2:77556154-77556173 | None:intergenic | 25.0% |
| ! | AGAAAACAAGTGAAAATTAG+GGG | + | chr4.2:77552805-77552824 | MS.gene48237:intron | 25.0% |
| ! | AGAGAAAACAAGTGAAAATT+AGG | + | chr4.2:77552803-77552822 | MS.gene48237:intron | 25.0% |
| ! | ATGATAAGGACTTATGTTAT+AGG | - | chr4.2:77552537-77552556 | None:intergenic | 25.0% |
| ! | CAACTAACATAATCTTGATT+TGG | + | chr4.2:77553269-77553288 | MS.gene48237:intron | 25.0% |
| ! | CAATAATTTAGTCATTCTAC+AGG | + | chr4.2:77555833-77555852 | MS.gene48237:intron | 25.0% |
| ! | CATATTAAGTATTACCTACA+TGG | + | chr4.2:77553035-77553054 | MS.gene48237:intron | 25.0% |
| ! | CTTACATTACATAGAATCAA+TGG | - | chr4.2:77552935-77552954 | None:intergenic | 25.0% |
| ! | CTTAGTTTCTATAATAACCA+AGG | + | chr4.2:77556134-77556153 | MS.gene48237:intron | 25.0% |
| ! | CTTGGTTATTATAGAAACTA+AGG | - | chr4.2:77556136-77556155 | None:intergenic | 25.0% |
| ! | CTTTGTAGGCAATTATAAAA+TGG | + | chr4.2:77552291-77552310 | MS.gene48237:intron | 25.0% |
| ! | GAGAAAACAAGTGAAAATTA+GGG | + | chr4.2:77552804-77552823 | MS.gene48237:intron | 25.0% |
| ! | GATTCAATGACCAAAATAAA+AGG | - | chr4.2:77552272-77552291 | None:intergenic | 25.0% |
| ! | GGTCCATTATATTAAAAGAA+AGG | - | chr4.2:77556982-77557001 | None:intergenic | 25.0% |
| ! | GGTTTAAGAACATTAATGTA+TGG | + | chr4.2:77556155-77556174 | MS.gene48237:intron | 25.0% |
| ! | GTGCTTTAGTATTTGATAAA+AGG | - | chr4.2:77557556-77557575 | None:intergenic | 25.0% |
| ! | TAATTTGATTGTAGGCAATT+TGG | + | chr4.2:77551752-77551771 | MS.gene48237:intron | 25.0% |
| ! | TACTTAATATGCTCAGATTA+TGG | - | chr4.2:77553026-77553045 | None:intergenic | 25.0% |
| ! | TTACAGGTAAAATCATATTG+TGG | + | chr4.2:77556864-77556883 | MS.gene48237:intron | 25.0% |
| ! | TTACATTTCTATATGCTAGA+GGG | + | chr4.2:77551686-77551705 | MS.gene48237:intron | 25.0% |
| ! | TTGTAAATTGCAAAAAACAG+CGG | + | chr4.2:77554549-77554568 | MS.gene48237:intron | 25.0% |
| ! | TTTCAATAAGATTTCCATGA+TGG | - | chr4.2:77552650-77552669 | None:intergenic | 25.0% |
| ! | TTTCTTATATATAGGAACAG+AGG | - | chr4.2:77556441-77556460 | None:intergenic | 25.0% |
| !! | AAAAGTTTTTAATAGGTGTC+TGG | + | chr4.2:77557424-77557443 | MS.gene48237:intron | 25.0% |
| !! | AATAATTTGAAATTTGCAGG+AGG | + | chr4.2:77555264-77555283 | MS.gene48237:intron | 25.0% |
| !! | ACAATATGATTTTACCTGTA+AGG | - | chr4.2:77556865-77556884 | None:intergenic | 25.0% |
| !! | ATCTTTTCATAATATACCTG+AGG | + | chr4.2:77554190-77554209 | MS.gene48237:intron | 25.0% |
| !! | GCTTGATATACTACTTATTT+TGG | + | chr4.2:77554683-77554702 | MS.gene48237:intron | 25.0% |
| !! | TAAAAGTTTAGCAATGCTTT+TGG | - | chr4.2:77556604-77556623 | None:intergenic | 25.0% |
| !! | TCTTTTATATTGAAGTAGAG+TGG | + | chr4.2:77554940-77554959 | MS.gene48237:intron | 25.0% |
| !! | TGTTTCTAAAGATTTCTACA+AGG | + | chr4.2:77555657-77555676 | MS.gene48237:intron | 25.0% |
| !! | TTATGGTAGATTGTAGTTTT+GGG | + | chr4.2:77551649-77551668 | MS.gene48237:intron | 25.0% |
| !! | TTTTTGCAATTTACAACACA+GGG | - | chr4.2:77554545-77554564 | None:intergenic | 25.0% |
| !!! | AGGAATGTTTTAAATCTTCA+TGG | + | chr4.2:77553607-77553626 | MS.gene48237:CDS | 25.0% |
| !!! | AGTTTGGTTATTTTATGCAT+TGG | + | chr4.2:77557576-77557595 | MS.gene48237:intron | 25.0% |
| !!! | AGTTTTTAGCTTTGATCAAA+TGG | + | chr4.2:77551595-77551614 | MS.gene48237:intron | 25.0% |
| !!! | ATAAAATTTGGTTTTAGCTG+GGG | - | chr4.2:77553976-77553995 | None:intergenic | 25.0% |
| !!! | ATCTGAGTTCTAAAATAAGA+AGG | - | chr4.2:77553799-77553818 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTTAGGATAGTTG+AGG | + | chr4.2:77554863-77554882 | MS.gene48237:intron | 25.0% |
| !!! | ATTTTGATTCTATGAAGTGT+TGG | + | chr4.2:77553088-77553107 | MS.gene48237:intron | 25.0% |
| !!! | CTCGACTTTTTCTTATATAT+AGG | - | chr4.2:77556449-77556468 | None:intergenic | 25.0% |
| !!! | GCAAAAGTAGAATTGATTTT+GGG | + | chr4.2:77557027-77557046 | MS.gene48237:intron | 25.0% |
| !!! | GTTTAACAATGGATTGTTTA+TGG | + | chr4.2:77552061-77552080 | MS.gene48237:intron | 25.0% |
| !!! | GTTTTTAGCTTTGATCAAAT+GGG | + | chr4.2:77551596-77551615 | MS.gene48237:intron | 25.0% |
| !!! | TAGAGATTTTAGGGATTTTT+TGG | + | chr4.2:77552347-77552366 | MS.gene48237:intron | 25.0% |
| !!! | TCTGAGTTCTAAAATAAGAA+GGG | - | chr4.2:77553798-77553817 | None:intergenic | 25.0% |
| !!! | TGCAAAAGTAGAATTGATTT+TGG | + | chr4.2:77557026-77557045 | MS.gene48237:intron | 25.0% |
| !!! | TTGGTTTGAGAAAATGTTTT+TGG | + | chr4.2:77552366-77552385 | MS.gene48237:intron | 25.0% |
| !!! | TTTTTTGCAATTTACAACAC+AGG | - | chr4.2:77554546-77554565 | None:intergenic | 25.0% |
| AAAGAATGAGAGAAACATGT+CGG | + | chr4.2:77554421-77554440 | MS.gene48237:CDS | 30.0% | |
| AATACATACTGAAGATTTGC+AGG | - | chr4.2:77551476-77551495 | None:intergenic | 30.0% | |
| AATTATGTGAGTTGTTATGC+AGG | + | chr4.2:77555975-77555994 | MS.gene48237:intron | 30.0% | |
| AATTATTGCCCAAGAGATAA+TGG | + | chr4.2:77552968-77552987 | MS.gene48237:intron | 30.0% | |
| ACTTAAGAGCTCAAATTCAA+TGG | - | chr4.2:77556107-77556126 | None:intergenic | 30.0% | |
| AGCACAAGAGAGTTTATTAA+CGG | - | chr4.2:77551441-77551460 | None:intergenic | 30.0% | |
| AGTATGCTGAAGATAACTAT+TGG | - | chr4.2:77554271-77554290 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | + | chr4.2:77551974-77551993 | MS.gene48237:intron | 30.0% | |
| ATAATATACCTGAGGTTCAT+TGG | + | chr4.2:77554198-77554217 | MS.gene48237:intron | 30.0% | |
| ATATCAGATAACAGGTTTGT+TGG | - | chr4.2:77554788-77554807 | None:intergenic | 30.0% | |
| ATCAAATTCAGTTAAACCTG+GGG | + | chr4.2:77556669-77556688 | MS.gene48237:intron | 30.0% | |
| ATGCAATTACAATTGAAAGC+AGG | + | chr4.2:77552834-77552853 | MS.gene48237:intron | 30.0% | |
| ATTGTGGTTCTCATAAATGT+TGG | + | chr4.2:77552994-77553013 | MS.gene48237:intron | 30.0% | |
| CACAATTATCCATTATCTCT+TGG | - | chr4.2:77552980-77552999 | None:intergenic | 30.0% | |
| CATCAAATTCAGTTAAACCT+GGG | + | chr4.2:77556668-77556687 | MS.gene48237:intron | 30.0% | |
| CTAATATCCATAAAGAAAGC+TGG | - | chr4.2:77557186-77557205 | None:intergenic | 30.0% | |
| CTCAAAACAAAGAAAAGTGA+TGG | - | chr4.2:77555503-77555522 | None:intergenic | 30.0% | |
| CTCAATGATACATACTTTGT+GGG | + | chr4.2:77556002-77556021 | MS.gene48237:CDS | 30.0% | |
| CTGTCAAAAGATGTCAAAAT+TGG | - | chr4.2:77553582-77553601 | None:intergenic | 30.0% | |
| CTTAAGAGCTCAAATTCAAT+GGG | - | chr4.2:77556106-77556125 | None:intergenic | 30.0% | |
| GAAAACAAGTGAAAATTAGG+GGG | + | chr4.2:77552806-77552825 | MS.gene48237:intron | 30.0% | |
| GATATAATTGCCCAACATTA+TGG | - | chr4.2:77555792-77555811 | None:intergenic | 30.0% | |
| GATGTTACTGTGTACTATAA+AGG | + | chr4.2:77555886-77555905 | MS.gene48237:CDS | 30.0% | |
| GATTGTTTATGGGATGATAT+TGG | + | chr4.2:77552072-77552091 | MS.gene48237:intron | 30.0% | |
| GCAAGAGCAGAAATAAAATT+TGG | - | chr4.2:77553988-77554007 | None:intergenic | 30.0% | |
| GGGGAAAATGCAAATTAAAA+AGG | - | chr4.2:77553955-77553974 | None:intergenic | 30.0% | |
| GTAAAATCATATTGTGGTCA+TGG | + | chr4.2:77556870-77556889 | MS.gene48237:CDS | 30.0% | |
| GTATGCTGAAGATAACTATT+GGG | - | chr4.2:77554270-77554289 | None:intergenic | 30.0% | |
| GTTACATTTCTATATGCTAG+AGG | + | chr4.2:77551685-77551704 | MS.gene48237:intron | 30.0% | |
| TAATATACACTTTCTCCTTG+TGG | - | chr4.2:77552322-77552341 | None:intergenic | 30.0% | |
| TAATCAACCAGCTTTCTTTA+TGG | + | chr4.2:77557176-77557195 | MS.gene48237:intron | 30.0% | |
| TAGAAACTTCACACTTGATT+AGG | + | chr4.2:77555766-77555785 | MS.gene48237:intron | 30.0% | |
| TATAAGCTGTTTATCCAAAC+AGG | + | chr4.2:77551973-77551992 | MS.gene48237:intron | 30.0% | |
| TCAAATACTAAAGCACAGTT+TGG | + | chr4.2:77557560-77557579 | MS.gene48237:intron | 30.0% | |
| TCATATTGCTATACCTGATT+GGG | + | chr4.2:77554056-77554075 | MS.gene48237:CDS | 30.0% | |
| TCATTGTTCATAGATTGTCT+TGG | + | chr4.2:77555361-77555380 | MS.gene48237:intron | 30.0% | |
| TCTCAATGATACATACTTTG+TGG | + | chr4.2:77556001-77556020 | MS.gene48237:CDS | 30.0% | |
| TTAAGAGCTCAAATTCAATG+GGG | - | chr4.2:77556105-77556124 | None:intergenic | 30.0% | |
| TTATCTGATATGTGTGATGA+GGG | + | chr4.2:77554797-77554816 | MS.gene48237:intron | 30.0% | |
| TTCTCCATGAGAATCTAAAA+GGG | - | chr4.2:77554465-77554484 | None:intergenic | 30.0% | |
| TTGAATGTAACCGTATATGT+CGG | + | chr4.2:77553180-77553199 | MS.gene48237:intron | 30.0% | |
| TTGATGGAAAATAACAAGTC+AGG | - | chr4.2:77556654-77556673 | None:intergenic | 30.0% | |
| TTTGGTCATTGAATCTTTGT+AGG | + | chr4.2:77552277-77552296 | MS.gene48237:intron | 30.0% | |
| ! | AAAAAACAAGGCATCTAAGT+AGG | - | chr4.2:77554109-77554128 | None:intergenic | 30.0% |
| ! | ATTTTACCTGTAAGGACAAA+GGG | - | chr4.2:77556857-77556876 | None:intergenic | 30.0% |
| ! | CTCACTTATAGATTTTCTGA+CGG | + | chr4.2:77555531-77555550 | MS.gene48237:intron | 30.0% |
| ! | CTTATGGTAGATTGTAGTTT+TGG | + | chr4.2:77551648-77551667 | MS.gene48237:intron | 30.0% |
| ! | GGTAGGTAATTTAAAATTCC+TGG | + | chr4.2:77554296-77554315 | MS.gene48237:intron | 30.0% |
| ! | TGTTTTCGTATATGCTATCT+TGG | - | chr4.2:77551885-77551904 | None:intergenic | 30.0% |
| ! | TTCTTTTGTGTGTTTTTCTC+AGG | + | chr4.2:77552157-77552176 | MS.gene48237:intron | 30.0% |
| ! | TTTATGGGATGATATTGGTT+TGG | + | chr4.2:77552077-77552096 | MS.gene48237:intron | 30.0% |
| !! | AAATTGATTCGTAGATTGGA+AGG | + | chr4.2:77554991-77555010 | MS.gene48237:intron | 30.0% |
| !! | AATATAATGGACCAGTTGTT+GGG | + | chr4.2:77556989-77557008 | MS.gene48237:intron | 30.0% |
| !! | AATTGATTCGTAGATTGGAA+GGG | + | chr4.2:77554992-77555011 | MS.gene48237:intron | 30.0% |
| !! | CAAGAGATAATGGATAATTG+TGG | + | chr4.2:77552978-77552997 | MS.gene48237:intron | 30.0% |
| !! | GTTATTAGGGATTAGCATTT+TGG | + | chr4.2:77553381-77553400 | MS.gene48237:intron | 30.0% |
| !! | TAAAAGCATCAACGAAAACA+AGG | - | chr4.2:77553908-77553927 | None:intergenic | 30.0% |
| !! | TAATATAATGGACCAGTTGT+TGG | + | chr4.2:77556988-77557007 | MS.gene48237:intron | 30.0% |
| !! | TATGGTAGATTGTAGTTTTG+GGG | + | chr4.2:77551650-77551669 | MS.gene48237:intron | 30.0% |
| !! | TCTCAAATTGATTCGTAGAT+TGG | + | chr4.2:77554987-77555006 | MS.gene48237:intron | 30.0% |
| !! | TTGATCAAATGGGTTTTTCT+TGG | + | chr4.2:77551606-77551625 | MS.gene48237:intron | 30.0% |
| !!! | ATTTTATTTCTGCTCTTGCA+AGG | + | chr4.2:77553989-77554008 | MS.gene48237:intron | 30.0% |
| !!! | TAAAATTTGGTTTTAGCTGG+GGG | - | chr4.2:77553975-77553994 | None:intergenic | 30.0% |
| !!! | TTTTATTTCTGCTCTTGCAA+GGG | + | chr4.2:77553990-77554009 | MS.gene48237:intron | 30.0% |
| !!! | TTTTTTTAGGATAGTTGAGG+TGG | + | chr4.2:77554866-77554885 | MS.gene48237:intron | 30.0% |
| AAATAAGAAGGGACTCAAAG+CGG | - | chr4.2:77553787-77553806 | None:intergenic | 35.0% | |
| AAATGGTAATTGAGAGTCGA+TGG | - | chr4.2:77555294-77555313 | None:intergenic | 35.0% | |
| AAGAATGAGAGAAACATGTC+GGG | + | chr4.2:77554422-77554441 | MS.gene48237:CDS | 35.0% | |
| AATCTAAAAGGGCAAAATGG+TGG | - | chr4.2:77554454-77554473 | None:intergenic | 35.0% | |
| AATGGTAATTGAGAGTCGAT+GGG | - | chr4.2:77555293-77555312 | None:intergenic | 35.0% | |
| ACAATCCGTTTACCAGATAT+GGG | - | chr4.2:77554030-77554049 | None:intergenic | 35.0% | |
| ACAGAAAATAAGTGTCTGCT+TGG | + | chr4.2:77555559-77555578 | MS.gene48237:intron | 35.0% | |
| ACTTGATTAGGCCATAATGT+TGG | + | chr4.2:77555778-77555797 | MS.gene48237:intron | 35.0% | |
| ATAACTATTGGGCTCATCTT+TGG | - | chr4.2:77554259-77554278 | None:intergenic | 35.0% | |
| ATACTGAAGATTTGCAGGTT+TGG | - | chr4.2:77551471-77551490 | None:intergenic | 35.0% | |
| ATAGCGTAATTACATCACTC+AGG | - | chr4.2:77554595-77554614 | None:intergenic | 35.0% | |
| ATTAGAAACCAATGAACCTC+AGG | - | chr4.2:77554209-77554228 | None:intergenic | 35.0% | |
| CAAACTGTTCAAAACTGACA+CGG | - | chr4.2:77553208-77553227 | None:intergenic | 35.0% | |
| CAAAGCTTCCTTACTTTGAT+TGG | + | chr4.2:77553745-77553764 | MS.gene48237:CDS | 35.0% | |
| CAAAGGATACTTCCATAATG+AGG | - | chr4.2:77556930-77556949 | None:intergenic | 35.0% | |
| CAACTATTAAACAGCCATGT+AGG | - | chr4.2:77553052-77553071 | None:intergenic | 35.0% | |
| CAATCAAAGTAAGGAAGCTT+TGG | - | chr4.2:77553747-77553766 | None:intergenic | 35.0% | |
| CATATCCCATATCTGGTAAA+CGG | + | chr4.2:77554022-77554041 | MS.gene48237:CDS | 35.0% | |
| CATCACACATATCAGATAAC+AGG | - | chr4.2:77554796-77554815 | None:intergenic | 35.0% | |
| CCAGGTTTAACTGAATTTGA+TGG | - | chr4.2:77556670-77556689 | None:intergenic | 35.0% | |
| CCATCAAATTCAGTTAAACC+TGG | + | chr4.2:77556667-77556686 | MS.gene48237:intron | 35.0% | |
| CTAATTATATGCCCAACAAC+TGG | - | chr4.2:77557003-77557022 | None:intergenic | 35.0% | |
| CTCATATTGCTATACCTGAT+TGG | + | chr4.2:77554055-77554074 | MS.gene48237:CDS | 35.0% | |
| CTTCCATAATGAGGAATGTT+TGG | - | chr4.2:77556921-77556940 | None:intergenic | 35.0% | |
| CTTCTCCATGAGAATCTAAA+AGG | - | chr4.2:77554466-77554485 | None:intergenic | 35.0% | |
| CTTGATTAGGCCATAATGTT+GGG | + | chr4.2:77555779-77555798 | MS.gene48237:intron | 35.0% | |
| GAGAATCTAAAAGGGCAAAA+TGG | - | chr4.2:77554457-77554476 | None:intergenic | 35.0% | |
| GTTAATGAAGTTATCTGCCA+TGG | + | chr4.2:77555423-77555442 | MS.gene48237:CDS | 35.0% | |
| GTTATCTGATATGTGTGATG+AGG | + | chr4.2:77554796-77554815 | MS.gene48237:intron | 35.0% | |
| TAACTATTGGGCTCATCTTT+GGG | - | chr4.2:77554258-77554277 | None:intergenic | 35.0% | |
| TAATACTCCCTCAGAAAGTT+GGG | - | chr4.2:77556531-77556550 | None:intergenic | 35.0% | |
| TACATACTTTGTGGGAAATG+TGG | + | chr4.2:77556010-77556029 | MS.gene48237:CDS | 35.0% | |
| TATAAAATGGGATAGCCACA+AGG | + | chr4.2:77552304-77552323 | MS.gene48237:intron | 35.0% | |
| TCATATTGTGGTCATGGAAT+TGG | + | chr4.2:77556876-77556895 | MS.gene48237:CDS | 35.0% | |
| TGCTCTCTTCAATGTAATCA+TGG | - | chr4.2:77557243-77557262 | None:intergenic | 35.0% | |
| TTATCTTCAGCATACTGTTG+AGG | + | chr4.2:77554275-77554294 | MS.gene48237:CDS | 35.0% | |
| TTCATATTACGACGCAAAAC+TGG | + | chr4.2:77554509-77554528 | MS.gene48237:intron | 35.0% | |
| TTCCTTACTTTGATTGGACT+GGG | + | chr4.2:77553751-77553770 | MS.gene48237:CDS | 35.0% | |
| TTCTTGATGTCATTGCCATT+TGG | + | chr4.2:77555203-77555222 | MS.gene48237:intron | 35.0% | |
| TTGGATAAGGCAATATCCAT+TGG | + | chr4.2:77556074-77556093 | MS.gene48237:CDS | 35.0% | |
| TTGTTCATAGATTGTCTTGG+TGG | + | chr4.2:77555364-77555383 | MS.gene48237:intron | 35.0% | |
| TTTCTCTCATTCTTTCGATC+TGG | - | chr4.2:77554416-77554435 | None:intergenic | 35.0% | |
| ! | ACACCAGTGTTGTTAAATAG+CGG | - | chr4.2:77554648-77554667 | None:intergenic | 35.0% |
| ! | AGACTGTTTGAGATAAGTTG+TGG | - | chr4.2:77552710-77552729 | None:intergenic | 35.0% |
| ! | AGCTTCAATTCCATGCATTT+TGG | - | chr4.2:77552186-77552205 | None:intergenic | 35.0% |
| ! | CAAAGAAAAGTGATGGAAAG+AGG | - | chr4.2:77555496-77555515 | None:intergenic | 35.0% |
| ! | CATATACCTGCATTGATCAT+TGG | - | chr4.2:77557349-77557368 | None:intergenic | 35.0% |
| ! | GATTTTACCTGTAAGGACAA+AGG | - | chr4.2:77556858-77556877 | None:intergenic | 35.0% |
| ! | GTGTTGTGTGGATAAACTTT+TGG | + | chr4.2:77554891-77554910 | MS.gene48237:intron | 35.0% |
| ! | TCAATTTGAGCACACTCTTT+TGG | + | chr4.2:77557506-77557525 | MS.gene48237:CDS | 35.0% |
| ! | TTTGCCCTTTTAGATTCTCA+TGG | + | chr4.2:77554458-77554477 | MS.gene48237:intron | 35.0% |
| !! | AGCAAGATTTTGGGAAGAAA+TGG | - | chr4.2:77555311-77555330 | None:intergenic | 35.0% |
| !! | ATAAGTTTTGTGAGACTGTC+TGG | + | chr4.2:77551813-77551832 | MS.gene48237:intron | 35.0% |
| !! | CAAAATCTGCTGTTTCTAAC+AGG | + | chr4.2:77555397-77555416 | MS.gene48237:intron | 35.0% |
| !! | GATCATTGGCTCAATTGTAA+AGG | - | chr4.2:77557335-77557354 | None:intergenic | 35.0% |
| !! | GTGTACTATAAAGGTGTTCA+TGG | + | chr4.2:77555895-77555914 | MS.gene48237:CDS | 35.0% |
| !! | GTTGTTTTCATAAGCCATCA+TGG | + | chr4.2:77552633-77552652 | MS.gene48237:intron | 35.0% |
| !! | TAAGTTTTGTGAGACTGTCT+GGG | + | chr4.2:77551814-77551833 | MS.gene48237:intron | 35.0% |
| !! | TGATAACTTCACCGATTTCA+CGG | - | chr4.2:77556702-77556721 | None:intergenic | 35.0% |
| !! | TGATATTGGTTTGGAGAACA+TGG | + | chr4.2:77552086-77552105 | MS.gene48237:intron | 35.0% |
| !!! | AAAATTTGGTTTTAGCTGGG+GGG | - | chr4.2:77553974-77553993 | None:intergenic | 35.0% |
| !!! | AGAGGGTTTTTTGGTCAATT+GGG | + | chr4.2:77551703-77551722 | MS.gene48237:intron | 35.0% |
| !!! | AGATTGTAGTTTTGGGGTTT+TGG | + | chr4.2:77551656-77551675 | MS.gene48237:intron | 35.0% |
| !!! | CTATATGCTAGAGGGTTTTT+TGG | + | chr4.2:77551694-77551713 | MS.gene48237:intron | 35.0% |
| !!! | CTGTATGCTAGAGGTTTTTT+GGG | + | chr4.2:77552007-77552026 | MS.gene48237:intron | 35.0% |
| !!! | TAGAGGGTTTTTTGGTCAAT+TGG | + | chr4.2:77551702-77551721 | MS.gene48237:intron | 35.0% |
| !!! | TCTGTATGCTAGAGGTTTTT+TGG | + | chr4.2:77552006-77552025 | MS.gene48237:intron | 35.0% |
| AACAAGTGAAAATTAGGGGG+TGG | + | chr4.2:77552809-77552828 | MS.gene48237:intron | 40.0% | |
| AACAGTTACCCTAACCGAAA+AGG | + | chr4.2:77552871-77552890 | MS.gene48237:intron | 40.0% | |
| AAGCCGCTATTTAACAACAC+TGG | + | chr4.2:77554642-77554661 | MS.gene48237:intron | 40.0% | |
| AATTGACAGAGTAGTTCACG+AGG | + | chr4.2:77555067-77555086 | MS.gene48237:CDS | 40.0% | |
| ACAAAGGGAAAATGTGAGCA+AGG | - | chr4.2:77556842-77556861 | None:intergenic | 40.0% | |
| ACCTTGCATCAATTGAATCC+AGG | - | chr4.2:77554317-77554336 | None:intergenic | 40.0% | |
| AGATTGATCTACCTTGCATC+AGG | - | chr4.2:77555453-77555472 | None:intergenic | 40.0% | |
| ATCAGTACATCTGAAGGCAA+AGG | + | chr4.2:77553641-77553660 | MS.gene48237:CDS | 40.0% | |
| ATTCAATGGGGACATACCAA+TGG | - | chr4.2:77556093-77556112 | None:intergenic | 40.0% | |
| ATTCAGTTAAACCTGGGGTA+CGG | + | chr4.2:77556674-77556693 | MS.gene48237:intron | 40.0% | |
| ATTGAGCCAATGATCAATGC+AGG | + | chr4.2:77557340-77557359 | MS.gene48237:CDS | 40.0% | |
| ATTTCATCAGTTGTCACACC+AGG | - | chr4.2:77555050-77555069 | None:intergenic | 40.0% | |
| CAAATGCACATATGAGTGCT+TGG | + | chr4.2:77556055-77556074 | MS.gene48237:CDS | 40.0% | |
| CAACGAAAACAAGGACAACA+AGG | - | chr4.2:77553899-77553918 | None:intergenic | 40.0% | |
| CACATATGAGTGCTTGGATA+AGG | + | chr4.2:77556061-77556080 | MS.gene48237:CDS | 40.0% | |
| CAGCAATAAGCTACTGCTTA+TGG | + | chr4.2:77551632-77551651 | MS.gene48237:intron | 40.0% | |
| CAGGTATAGCAATATGAGCT+GGG | - | chr4.2:77554053-77554072 | None:intergenic | 40.0% | |
| CGTTTACCAGATATGGGATA+TGG | - | chr4.2:77554024-77554043 | None:intergenic | 40.0% | |
| CTAATACTCCCTCAGAAAGT+TGG | - | chr4.2:77556532-77556551 | None:intergenic | 40.0% | |
| CTTCCTTACTTTGATTGGAC+TGG | + | chr4.2:77553750-77553769 | MS.gene48237:CDS | 40.0% | |
| GAAAATGTGAGCAAGGAACA+AGG | - | chr4.2:77556835-77556854 | None:intergenic | 40.0% | |
| GACAATCCGTTTACCAGATA+TGG | - | chr4.2:77554031-77554050 | None:intergenic | 40.0% | |
| GCACAAATCAGTACATCTGA+AGG | + | chr4.2:77553635-77553654 | MS.gene48237:CDS | 40.0% | |
| GCACCAAACATTCCTCATTA+TGG | + | chr4.2:77556915-77556934 | MS.gene48237:CDS | 40.0% | |
| TACCCAGTCCAATCAAAGTA+AGG | - | chr4.2:77553756-77553775 | None:intergenic | 40.0% | |
| TCAGAAGGGTAGCATATAGA+AGG | + | chr4.2:77553425-77553444 | MS.gene48237:intron | 40.0% | |
| TCAGGTATAGCAATATGAGC+TGG | - | chr4.2:77554054-77554073 | None:intergenic | 40.0% | |
| TCCTGGATTCAATTGATGCA+AGG | + | chr4.2:77554313-77554332 | MS.gene48237:intron | 40.0% | |
| TGACAACATTATGGCCTGTT+TGG | - | chr4.2:77555732-77555751 | None:intergenic | 40.0% | |
| TTATTTCCTGCCAGTGGTTA+AGG | - | chr4.2:77557283-77557302 | None:intergenic | 40.0% | |
| TTCATGTCTTTCAGTGTAGC+TGG | + | chr4.2:77555148-77555167 | MS.gene48237:intron | 40.0% | |
| TTGCAATACTCCTTAACCAC+TGG | + | chr4.2:77557270-77557289 | MS.gene48237:intron | 40.0% | |
| TTGCTATCGCAATTGCCAAA+TGG | - | chr4.2:77555221-77555240 | None:intergenic | 40.0% | |
| TTGGCAATTGCGATAGCAAT+TGG | + | chr4.2:77555222-77555241 | MS.gene48237:intron | 40.0% | |
| TTGTTGACCCAACTTTCTGA+GGG | + | chr4.2:77556521-77556540 | MS.gene48237:intron | 40.0% | |
| TTTGTTGACCCAACTTTCTG+AGG | + | chr4.2:77556520-77556539 | MS.gene48237:intron | 40.0% | |
| ! | AGGTCAAGTTGCTTGTACAT+TGG | + | chr4.2:77554333-77554352 | MS.gene48237:intron | 40.0% |
| ! | ATCTGAAGACCTTTTCGGTT+AGG | - | chr4.2:77552883-77552902 | None:intergenic | 40.0% |
| ! | CAATTTGGGACTGTTTGGAT+TGG | + | chr4.2:77551767-77551786 | MS.gene48237:intron | 40.0% |
| ! | CATTTTCCCTTTGTCCTTAC+AGG | + | chr4.2:77556848-77556867 | MS.gene48237:intron | 40.0% |
| ! | TAAAGCAGTTGGTGTGATGA+AGG | + | chr4.2:77557300-77557319 | MS.gene48237:CDS | 40.0% |
| ! | TACGCATCTGAAGACCTTTT+CGG | - | chr4.2:77552888-77552907 | None:intergenic | 40.0% |
| ! | TCTGAAGACCTTTTCGGTTA+GGG | - | chr4.2:77552882-77552901 | None:intergenic | 40.0% |
| !! | TAGCATTTTGGTGAGAGAGA+TGG | + | chr4.2:77553393-77553412 | MS.gene48237:intron | 40.0% |
| !!! | CGTGTCAGTTTTGAACAGTT+TGG | + | chr4.2:77553206-77553225 | MS.gene48237:intron | 40.0% |
| AACCGTCATGCTTCAATGTC+AGG | + | chr4.2:77556721-77556740 | MS.gene48237:CDS | 45.0% | |
| AATACTCCTTAACCACTGGC+AGG | + | chr4.2:77557274-77557293 | MS.gene48237:intron | 45.0% | |
| ACCAGAATGCTGAACCTTCA+CGG | - | chr4.2:77552212-77552231 | None:intergenic | 45.0% | |
| ACCTTGCATCAGGAATTCCA+TGG | - | chr4.2:77555443-77555462 | None:intergenic | 45.0% | |
| AGCCTGACATTGAAGCATGA+CGG | - | chr4.2:77556726-77556745 | None:intergenic | 45.0% | |
| AGGGTAGCATATAGAAGGTG+AGG | + | chr4.2:77553430-77553449 | MS.gene48237:intron | 45.0% | |
| AGGTACTATGGTTGGATCTC+TGG | + | chr4.2:77556366-77556385 | MS.gene48237:intron | 45.0% | |
| ATATTACGAGTGTCCCACAC+AGG | + | chr4.2:77556346-77556365 | MS.gene48237:intron | 45.0% | |
| ATCCAACCATAGTACCTGTG+TGG | - | chr4.2:77556363-77556382 | None:intergenic | 45.0% | |
| CTCATTCTTTCGATCTGGTC+TGG | - | chr4.2:77554411-77554430 | None:intergenic | 45.0% | |
| CTCTAGCATACAGAGATGCA+AGG | - | chr4.2:77552000-77552019 | None:intergenic | 45.0% | |
| CTGGCAGGAAATAAAGCAGT+TGG | + | chr4.2:77557289-77557308 | MS.gene48237:intron | 45.0% | |
| CTTCAGCATACTGTTGAGGT+AGG | + | chr4.2:77554279-77554298 | MS.gene48237:intron | 45.0% | |
| CTTGCATCTCTGTATGCTAG+AGG | + | chr4.2:77551998-77552017 | MS.gene48237:intron | 45.0% | |
| GGATGAAGAATCTCGTCAGT+TGG | + | chr4.2:77556031-77556050 | MS.gene48237:CDS | 45.0% | |
| GGTTATACTGCGTGAAGAGA+GGG | + | chr4.2:77553709-77553728 | MS.gene48237:CDS | 45.0% | |
| GTAACATCAGTCCATCCATC+CGG | - | chr4.2:77557465-77557484 | None:intergenic | 45.0% | |
| GTCATTCTACAGGAAGCTTG+AGG | + | chr4.2:77555843-77555862 | MS.gene48237:intron | 45.0% | |
| GTTAGTTGCAAAACACCAGC+AGG | - | chr4.2:77553257-77553276 | None:intergenic | 45.0% | |
| TCCAACCATAGTACCTGTGT+GGG | - | chr4.2:77556362-77556381 | None:intergenic | 45.0% | |
| TCTCAGGTGTCCAAAATGCA+TGG | + | chr4.2:77552173-77552192 | MS.gene48237:intron | 45.0% | |
| TGATTCGTAGATTGGAAGGG+AGG | + | chr4.2:77554995-77555014 | MS.gene48237:intron | 45.0% | |
| TGGACTGATGTTACAGCAGA+TGG | + | chr4.2:77557471-77557490 | MS.gene48237:CDS | 45.0% | |
| TGGTTATACTGCGTGAAGAG+AGG | + | chr4.2:77553708-77553727 | MS.gene48237:CDS | 45.0% | |
| TTCAATGTCAGGCTTCTCAG+TGG | + | chr4.2:77556732-77556751 | MS.gene48237:CDS | 45.0% | |
| TTCTACAGGAAGCTTGAGGA+TGG | + | chr4.2:77555847-77555866 | MS.gene48237:intron | 45.0% | |
| ! | AACTCAGACTCACTTGGTGA+AGG | + | chr4.2:77553684-77553703 | MS.gene48237:CDS | 45.0% |
| ! | ACCTACGTGCAGCAAGATTT+TGG | - | chr4.2:77555321-77555340 | None:intergenic | 45.0% |
| ! | CCTACGTGCAGCAAGATTTT+GGG | - | chr4.2:77555320-77555339 | None:intergenic | 45.0% |
| ! | CTGGTGTCTTCATTTTCACG+AGG | + | chr4.2:77554661-77554680 | MS.gene48237:intron | 45.0% |
| ! | GACATCTTTTGACAGCTCTC+AGG | + | chr4.2:77553587-77553606 | MS.gene48237:intron | 45.0% |
| ! | GTAGGCAATTTGGGACTGTT+TGG | + | chr4.2:77551762-77551781 | MS.gene48237:intron | 45.0% |
| !! | AAGGCAAAGGTATCCTCAGT+TGG | + | chr4.2:77553654-77553673 | MS.gene48237:CDS | 45.0% |
| !! | ACTGCTTTATTTCCTGCCAG+TGG | - | chr4.2:77557289-77557308 | None:intergenic | 45.0% |
| !! | GAGGAATGTTTGGTGCACAA+TGG | - | chr4.2:77556911-77556930 | None:intergenic | 45.0% |
| !!! | GGGTTTTTTGGTCAATTGGG+TGG | + | chr4.2:77551706-77551725 | MS.gene48237:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAAACA+AGG | - | chr4.2:77554121-77554140 | None:intergenic | 5.0% |
| !!! | ATTATATATAAAAGTTATTT+TGG | + | chr4.2:77557064-77557083 | MS.gene48237:intron | 5.0% |
| AAACACCAGCAGGTGAAACC+AGG | - | chr4.2:77553247-77553266 | None:intergenic | 50.0% | |
| ACCAGGCTGAATAATCCGAG+CGG | - | chr4.2:77555033-77555052 | None:intergenic | 50.0% | |
| AGATGGCGTTGTTGCTCAGA+AGG | + | chr4.2:77553410-77553429 | MS.gene48237:intron | 50.0% | |
| AGTGTCCCACACAGGTACTA+TGG | + | chr4.2:77556354-77556373 | MS.gene48237:intron | 50.0% | |
| CAGAATGCTGAACCTTCACG+GGG | - | chr4.2:77552210-77552229 | None:intergenic | 50.0% | |
| CCAGAATGCTGAACCTTCAC+GGG | - | chr4.2:77552211-77552230 | None:intergenic | 50.0% | |
| CCCAAAATCTTGCTGCACGT+AGG | + | chr4.2:77555317-77555336 | MS.gene48237:intron | 50.0% | |
| CTCACATCATCAGCCCAATC+AGG | - | chr4.2:77554072-77554091 | None:intergenic | 50.0% | |
| GAATTGAAGCTTCCCCGTGA+AGG | + | chr4.2:77552195-77552214 | MS.gene48237:CDS | 50.0% | |
| GATGGCGTTGTTGCTCAGAA+GGG | + | chr4.2:77553411-77553430 | MS.gene48237:intron | 50.0% | |
| GCACAGAACTCAGACTCACT+TGG | + | chr4.2:77553678-77553697 | MS.gene48237:CDS | 50.0% | |
| GCCATGGAATTCCTGATGCA+AGG | + | chr4.2:77555439-77555458 | MS.gene48237:CDS | 50.0% | |
| TAAGAAGGGACTCAAAGCGG+TGG | - | chr4.2:77553784-77553803 | None:intergenic | 50.0% | |
| TCCCACACAGGTACTATGGT+TGG | + | chr4.2:77556358-77556377 | MS.gene48237:intron | 50.0% | |
| ! | CAGACTCACTTGGTGAAGGA+TGG | + | chr4.2:77553688-77553707 | MS.gene48237:CDS | 50.0% |
| ! | GTAGATTGGAAGGGAGGTGT+TGG | + | chr4.2:77555001-77555020 | MS.gene48237:intron | 50.0% |
| !! | TGACACGGCACCGACATATA+CGG | - | chr4.2:77553193-77553212 | None:intergenic | 50.0% |
| ACATGCCTGGTTTCACCTGC+TGG | + | chr4.2:77553239-77553258 | MS.gene48237:intron | 55.0% | |
| ATACTGCGTGAAGAGAGGGC+AGG | + | chr4.2:77553713-77553732 | MS.gene48237:CDS | 55.0% | |
| ATTTCACGGAACCGTACCCC+AGG | - | chr4.2:77556688-77556707 | None:intergenic | 55.0% | |
| CACGAGGCAACTATTGCTGC+AGG | + | chr4.2:77555083-77555102 | MS.gene48237:CDS | 55.0% | |
| CAGAGATGCAAGGCCCTGTT+TGG | - | chr4.2:77551990-77552009 | None:intergenic | 55.0% | |
| CAGGTGAAACCAGGCATGTG+CGG | - | chr4.2:77553238-77553257 | None:intergenic | 55.0% | |
| CCCGTGAAGGTTCAGCATTC+TGG | + | chr4.2:77552208-77552227 | MS.gene48237:CDS | 55.0% | |
| GGGGTACGGTTCCGTGAAAT+CGG | + | chr4.2:77556688-77556707 | MS.gene48237:CDS | 55.0% | |
| GTGCGGCCATATCCCATATC+TGG | + | chr4.2:77554015-77554034 | MS.gene48237:CDS | 55.0% | |
| GTTGAGGTGGCTGTGTTGTG+TGG | + | chr4.2:77554879-77554898 | MS.gene48237:intron | 55.0% | |
| TACTGCGTGAAGAGAGGGCA+GGG | + | chr4.2:77553714-77553733 | MS.gene48237:CDS | 55.0% | |
| TGAGTTCTGTGCGCCAACTG+AGG | - | chr4.2:77553670-77553689 | None:intergenic | 55.0% | |
| ! | GCAGTTGGTGTGATGAAGGC+TGG | + | chr4.2:77557304-77557323 | MS.gene48237:CDS | 55.0% |
| ATCGACTGTGGCCGGATGGA+TGG | + | chr4.2:77557451-77557470 | MS.gene48237:CDS | 60.0% | |
| CTGCTCTTGCAAGGGCAGTG+CGG | + | chr4.2:77553998-77554017 | MS.gene48237:intron | 60.0% | |
| GCCGCTCGGATTATTCAGCC+TGG | + | chr4.2:77555029-77555048 | MS.gene48237:CDS | 60.0% | |
| GTGTCTGGCGTGATCGACTG+TGG | + | chr4.2:77557439-77557458 | MS.gene48237:CDS | 60.0% | |
| !! | AGGTGTTGGATGCAGCCGCT+CGG | + | chr4.2:77555015-77555034 | MS.gene48237:CDS | 60.0% |
| CGTGATCGACTGTGGCCGGA+TGG | + | chr4.2:77557447-77557466 | MS.gene48237:CDS | 65.0% | |
| CTGGCGTGATCGACTGTGGC+CGG | + | chr4.2:77557443-77557462 | MS.gene48237:CDS | 65.0% | |
| TGGACGACACCGCACATGCC+TGG | + | chr4.2:77553226-77553245 | MS.gene48237:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 77551416 | 77557607 | 77551416 | ID=MS.gene48237 |
| chr4.2 | mRNA | 77551416 | 77557607 | 77551416 | ID=MS.gene48237.t1;Parent=MS.gene48237 |
| chr4.2 | exon | 77551416 | 77551486 | 77551416 | ID=MS.gene48237.t1.exon1;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77551416 | 77551486 | 77551416 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77552179 | 77552229 | 77552179 | ID=MS.gene48237.t1.exon2;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77552179 | 77552229 | 77552179 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77553602 | 77553772 | 77553602 | ID=MS.gene48237.t1.exon3;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77553602 | 77553772 | 77553602 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77554011 | 77554086 | 77554011 | ID=MS.gene48237.t1.exon4;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77554011 | 77554086 | 77554011 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77554249 | 77554296 | 77554249 | ID=MS.gene48237.t1.exon5;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77554249 | 77554296 | 77554249 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77554399 | 77554443 | 77554399 | ID=MS.gene48237.t1.exon6;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77554399 | 77554443 | 77554399 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77555005 | 77555104 | 77555005 | ID=MS.gene48237.t1.exon7;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77555005 | 77555104 | 77555005 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77555283 | 77555334 | 77555283 | ID=MS.gene48237.t1.exon8;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77555283 | 77555334 | 77555283 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77555419 | 77555460 | 77555419 | ID=MS.gene48237.t1.exon9;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77555419 | 77555460 | 77555419 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77555855 | 77555916 | 77555855 | ID=MS.gene48237.t1.exon10;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77555855 | 77555916 | 77555855 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77555997 | 77556095 | 77555997 | ID=MS.gene48237.t1.exon11;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77555997 | 77556095 | 77555997 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77556680 | 77556753 | 77556680 | ID=MS.gene48237.t1.exon12;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77556680 | 77556753 | 77556680 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77556870 | 77556939 | 77556870 | ID=MS.gene48237.t1.exon13;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77556870 | 77556939 | 77556870 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77557296 | 77557361 | 77557296 | ID=MS.gene48237.t1.exon14;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77557296 | 77557361 | 77557296 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77557439 | 77557527 | 77557439 | ID=MS.gene48237.t1.exon15;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77557439 | 77557527 | 77557439 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| chr4.2 | exon | 77557602 | 77557607 | 77557602 | ID=MS.gene48237.t1.exon16;Parent=MS.gene48237.t1 |
| chr4.2 | CDS | 77557602 | 77557607 | 77557602 | ID=cds.MS.gene48237.t1;Parent=MS.gene48237.t1 |
| Gene Sequence |
| Protein sequence |
