Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93411.t1 | XP_013457939.1 | 99.7 | 365 | 1 | 0 | 25 | 389 | 61 | 425 | 1.30E-214 | 755.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93411.t1 | Q56Y85 | 92.5 | 361 | 27 | 0 | 29 | 389 | 79 | 439 | 5.3e-204 | 711.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93411.t1 | A0A072V1I1 | 99.7 | 365 | 1 | 0 | 25 | 389 | 61 | 425 | 9.6e-215 | 755.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93411 | MS.gene58403 | PPI |
| MS.gene93411 | MS.gene059218 | PPI |
| MS.gene93798 | MS.gene93411 | PPI |
| MS.gene63721 | MS.gene93411 | PPI |
| MS.gene033096 | MS.gene93411 | PPI |
| MS.gene58403 | MS.gene93411 | PPI |
| MS.gene48242 | MS.gene93411 | PPI |
| MS.gene93411 | MS.gene48237 | PPI |
| MS.gene064281 | MS.gene93411 | PPI |
| MS.gene45850 | MS.gene93411 | PPI |
| MS.gene48240 | MS.gene93411 | PPI |
| MS.gene044411 | MS.gene93411 | PPI |
| MS.gene039110 | MS.gene93411 | PPI |
| MS.gene063366 | MS.gene93411 | PPI |
| MS.gene060216 | MS.gene93411 | PPI |
| MS.gene066163 | MS.gene93411 | PPI |
| MS.gene040581 | MS.gene93411 | PPI |
| MS.gene91353 | MS.gene93411 | PPI |
| MS.gene48925 | MS.gene93411 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93411.t1 | MTR_4g109100 | 99.738 | 382 | 1 | 0 | 8 | 389 | 44 | 425 | 0.0 | 799 |
| MS.gene93411.t1 | MTR_1g105940 | 98.953 | 382 | 4 | 0 | 8 | 389 | 47 | 428 | 0.0 | 795 |
| MS.gene93411.t1 | MTR_1g105940 | 98.806 | 335 | 4 | 0 | 55 | 389 | 10 | 344 | 0.0 | 695 |
| MS.gene93411.t1 | MTR_2g078290 | 25.000 | 332 | 229 | 7 | 65 | 384 | 7 | 330 | 4.32e-29 | 117 |
| MS.gene93411.t1 | MTR_7g069390 | 25.602 | 332 | 213 | 8 | 65 | 377 | 7 | 323 | 1.11e-27 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93411.t1 | AT3G59990 | 92.287 | 363 | 28 | 0 | 27 | 389 | 77 | 439 | 0.0 | 727 |
| MS.gene93411.t1 | AT3G59990 | 92.287 | 363 | 28 | 0 | 27 | 389 | 77 | 439 | 0.0 | 727 |
| MS.gene93411.t1 | AT3G59990 | 92.287 | 363 | 28 | 0 | 27 | 389 | 77 | 439 | 0.0 | 727 |
| MS.gene93411.t1 | AT3G59990 | 92.287 | 363 | 28 | 0 | 27 | 389 | 77 | 439 | 0.0 | 727 |
| MS.gene93411.t1 | AT2G44180 | 90.110 | 364 | 36 | 0 | 26 | 389 | 78 | 441 | 0.0 | 710 |
| MS.gene93411.t1 | AT2G44180 | 90.966 | 321 | 29 | 0 | 69 | 389 | 1 | 321 | 0.0 | 624 |
| MS.gene93411.t1 | AT3G51800 | 26.549 | 339 | 215 | 8 | 65 | 384 | 8 | 331 | 1.30e-29 | 118 |
| MS.gene93411.t1 | AT3G51800 | 26.549 | 339 | 215 | 8 | 65 | 384 | 8 | 331 | 1.80e-29 | 118 |
| MS.gene93411.t1 | AT3G51800 | 26.149 | 348 | 214 | 9 | 65 | 384 | 8 | 340 | 2.88e-27 | 112 |
Find 107 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTAGTGGCTGCATTCC+AGG | 0.242992 | 1.1:-76063071 | None:intergenic |
| TCCTATGAGGTTGAGATTAA+TGG | 0.247977 | 1.1:+76062003 | MS.gene93411:CDS |
| CGACGAACTGAATTATATAT+TGG | 0.250887 | 1.1:-76058807 | None:intergenic |
| ATTTCTATGCTAGTAACTTA+TGG | 0.289934 | 1.1:+76058739 | MS.gene93411:intron |
| AACAGTCTTATCTCCGGAAT+TGG | 0.313628 | 1.1:-76060089 | None:intergenic |
| GGAAAGCAATGCCTGCTTGC+AGG | 0.317202 | 1.1:-76059524 | None:intergenic |
| TACTGCTGAATATCACCTTC+TGG | 0.326837 | 1.1:-76057630 | None:intergenic |
| GTTCTTGATCTTTACCCATC+TGG | 0.344235 | 1.1:+76057600 | MS.gene93411:CDS |
| AGCAACCTATACGGGTATTA+AGG | 0.345844 | 1.1:+76060345 | MS.gene93411:CDS |
| TTCTATGCAATTGAAACCTT+CGG | 0.354960 | 1.1:+76062934 | MS.gene93411:CDS |
| CTCTAGGGAAGCAACCTATA+CGG | 0.355384 | 1.1:+76060336 | MS.gene93411:CDS |
| AGGAGAGACTAAATACTTAA+TGG | 0.355741 | 1.1:+76063209 | MS.gene93411:CDS |
| TCATTGCAGTTAAGAGTATA+CGG | 0.356486 | 1.1:+76062812 | MS.gene93411:intron |
| GTGTGATGCTGGCATTGTTC+AGG | 0.364503 | 1.1:+76063245 | MS.gene93411:CDS |
| ACAGTCTTATCTCCGGAATT+GGG | 0.370525 | 1.1:-76060088 | None:intergenic |
| CCACAGGGTGCTCTCTGAAT+TGG | 0.373674 | 1.1:+76059547 | MS.gene93411:CDS |
| GGTGGATCTGTCTGCTCAAC+GGG | 0.375413 | 1.1:-76057567 | None:intergenic |
| AAGTCGGACATCAGCATTCC+AGG | 0.376276 | 1.1:-76059453 | None:intergenic |
| TTTCCAGGGTTGCTGCTCAC+TGG | 0.382312 | 1.1:+76060062 | MS.gene93411:intron |
| TCTATGCAATTGAAACCTTC+GGG | 0.389467 | 1.1:+76062935 | MS.gene93411:CDS |
| GATGTGATGAAGTTGGATTT+TGG | 0.396243 | 1.1:+76060124 | MS.gene93411:CDS |
| AAGTACCTTAATACCCGTAT+AGG | 0.400679 | 1.1:-76060350 | None:intergenic |
| CCTATGAGGTTGAGATTAAT+GGG | 0.409711 | 1.1:+76062004 | MS.gene93411:CDS |
| TGCTCTCCACCTTTCACAAT+GGG | 0.411459 | 1.1:-76062889 | None:intergenic |
| GATATAACTTCTTTGCATGT+TGG | 0.419203 | 1.1:-76063622 | None:intergenic |
| AGATCAAGAACAGGAATTGA+TGG | 0.426850 | 1.1:-76057588 | None:intergenic |
| ATTGAAACCTTCGGGTCAAC+TGG | 0.432794 | 1.1:+76062943 | MS.gene93411:CDS |
| GCAGGCATTGCTTTCCCCAC+AGG | 0.445164 | 1.1:+76059531 | MS.gene93411:CDS |
| CCCATTAATCTCAACCTCAT+AGG | 0.455878 | 1.1:-76062004 | None:intergenic |
| GCTTCCTTTCACGTCACATA+GGG | 0.468088 | 1.1:-76063563 | None:intergenic |
| CCCACTGCTTGAAGCCTCTA+GGG | 0.469534 | 1.1:+76060321 | MS.gene93411:CDS |
| TGGCTTACCATTTAGGAAGC+TGG | 0.470912 | 1.1:+76061928 | MS.gene93411:intron |
| TGCAAAGAAGTTATATCAAA+GGG | 0.471006 | 1.1:+76063628 | MS.gene93411:CDS |
| ACGTCACATAGGGGAGGATA+AGG | 0.475041 | 1.1:-76063553 | None:intergenic |
| CAAGCAGTGGGTCAAACATC+GGG | 0.475650 | 1.1:-76060309 | None:intergenic |
| ATCTAAATATCGCCTACAAA+AGG | 0.477272 | 1.1:-76063181 | None:intergenic |
| AAATGTTATGTTCAGGGAAA+GGG | 0.481107 | 1.1:+76063034 | MS.gene93411:intron |
| TTAAGTATTTAGTCTCTCCT+AGG | 0.484045 | 1.1:-76063206 | None:intergenic |
| ATGAAAGGCATTATAAAGCC+TGG | 0.486937 | 1.1:+76059435 | MS.gene93411:CDS |
| AAGAGTATACGGAATTTGAA+TGG | 0.489615 | 1.1:+76062823 | MS.gene93411:CDS |
| AGCAGCAGAAGTTCATCGTC+AGG | 0.491602 | 1.1:+76058830 | MS.gene93411:CDS |
| TAACAAGAACTTCTCCACTT+TGG | 0.495871 | 1.1:+76063158 | MS.gene93411:CDS |
| TCCCTAGAGGCTTCAAGCAG+TGG | 0.496490 | 1.1:-76060322 | None:intergenic |
| GTATGATGATGTGATGAAGT+TGG | 0.503347 | 1.1:+76060117 | MS.gene93411:CDS |
| GATGGGTAAAGATCAAGAAC+AGG | 0.505511 | 1.1:-76057597 | None:intergenic |
| CTTTGCATGTTGGTCGGAGT+AGG | 0.507622 | 1.1:-76063612 | None:intergenic |
| TCTAGGGAAGCAACCTATAC+GGG | 0.508969 | 1.1:+76060337 | MS.gene93411:CDS |
| TTGAAGAACTTGTGTGATGC+TGG | 0.511073 | 1.1:+76063234 | MS.gene93411:CDS |
| GAGCAGACAAAGATGGAAGA+GGG | 0.512947 | 1.1:+76062907 | MS.gene93411:CDS |
| ATGCAAAGAAGTTATATCAA+AGG | 0.517146 | 1.1:+76063627 | MS.gene93411:CDS |
| CTCCAATGTTTCACATAAGT+CGG | 0.525311 | 1.1:-76059469 | None:intergenic |
| CAGGCATTGCTTTCCCCACA+GGG | 0.526979 | 1.1:+76059532 | MS.gene93411:CDS |
| AGGTGGAGAGCAGACAAAGA+TGG | 0.531180 | 1.1:+76062900 | MS.gene93411:CDS |
| CAGTCTTATCTCCGGAATTG+GGG | 0.534987 | 1.1:-76060087 | None:intergenic |
| TCAGAGGATGGCCTGCAAGC+AGG | 0.539062 | 1.1:+76059513 | MS.gene93411:CDS |
| TGCTGCAATTCAAGAGGTCA+TGG | 0.541118 | 1.1:+76061978 | MS.gene93411:CDS |
| AATTATATATTGGTTTCTGA+AGG | 0.541740 | 1.1:-76058797 | None:intergenic |
| CTGCTCTCCACCTTTCACAA+TGG | 0.543192 | 1.1:-76062890 | None:intergenic |
| CCCTAGAGGCTTCAAGCAGT+GGG | 0.545041 | 1.1:-76060321 | None:intergenic |
| AGCTTCCTTTCACGTCACAT+AGG | 0.546614 | 1.1:-76063564 | None:intergenic |
| TGGTGGATCTGTCTGCTCAA+CGG | 0.548615 | 1.1:-76057568 | None:intergenic |
| ATTAATGGGAAGGTGTATCA+AGG | 0.550038 | 1.1:+76062018 | MS.gene93411:CDS |
| AATTTGAATGGACATAGCAT+TGG | 0.550755 | 1.1:+76062835 | MS.gene93411:CDS |
| GATGTGCGCCTTTGTGATGT+TGG | 0.550983 | 1.1:+76061955 | MS.gene93411:CDS |
| ACCCACTGCTTGAAGCCTCT+AGG | 0.553042 | 1.1:+76060320 | MS.gene93411:CDS |
| TCAAGCAGTGGGTCAAACAT+CGG | 0.558664 | 1.1:-76060310 | None:intergenic |
| TCCATGTATTACCATCTATG+TGG | 0.559923 | 1.1:-76060150 | None:intergenic |
| CTGAAGAACAGTCTTATCTC+CGG | 0.560346 | 1.1:-76060095 | None:intergenic |
| TAACTTCTTTGCATGTTGGT+CGG | 0.562102 | 1.1:-76063618 | None:intergenic |
| AGAGCAGACAAAGATGGAAG+AGG | 0.562137 | 1.1:+76062906 | MS.gene93411:CDS |
| ATCAGAGGAGAAGAGAGAGC+TGG | 0.563096 | 1.1:+76058770 | MS.gene93411:CDS |
| GCTAATAGTTGCTTAGCTCT+AGG | 0.564078 | 1.1:-76063129 | None:intergenic |
| AGAGGTCATGGAGTCCTATG+AGG | 0.571277 | 1.1:+76061990 | MS.gene93411:CDS |
| AGCAGACAAAGATGGAAGAG+GGG | 0.576340 | 1.1:+76062908 | MS.gene93411:CDS |
| CCTTCTGGAAAATCTCCAGA+TGG | 0.580900 | 1.1:-76057615 | None:intergenic |
| GGCCGCTATCAAATTCATGC+TGG | 0.582517 | 1.1:+76062856 | MS.gene93411:CDS |
| CCTCCCCTATGTGACGTGAA+AGG | 0.585633 | 1.1:+76063559 | MS.gene93411:CDS |
| GTCCGACTTATGTGAAACAT+TGG | 0.589857 | 1.1:+76059467 | MS.gene93411:CDS |
| TCTGTTCCCATTGTGAAAGG+TGG | 0.590439 | 1.1:+76062883 | MS.gene93411:CDS |
| TCTGTGGTCAGGAAGAAGAA+AGG | 0.592872 | 1.1:+76057543 | MS.gene93411:intron |
| CTCTGATATTAGCTTACGAA+CGG | 0.593227 | 1.1:-76059496 | None:intergenic |
| TAGGTTCGGAAATATATGAA+AGG | 0.598735 | 1.1:+76059420 | MS.gene93411:intron |
| ACTATTACCAGTTGACCCGA+AGG | 0.599081 | 1.1:-76062950 | None:intergenic |
| CGTATAGGTTGCTTCCCTAG+AGG | 0.600451 | 1.1:-76060335 | None:intergenic |
| TGAGGTTGAGATTAATGGGA+AGG | 0.601845 | 1.1:+76062008 | MS.gene93411:CDS |
| AGGGTATGTACGAGAAGACC+TGG | 0.602085 | 1.1:+76063053 | MS.gene93411:CDS |
| CCATGTATTACCATCTATGT+GGG | 0.603110 | 1.1:-76060149 | None:intergenic |
| TCGCCTACAAAAGGCCAAAG+TGG | 0.603161 | 1.1:-76063172 | None:intergenic |
| GCAGACAAAGATGGAAGAGG+GGG | 0.611179 | 1.1:+76062909 | MS.gene93411:CDS |
| CAATTCAGAGAGCACCCTGT+GGG | 0.611392 | 1.1:-76059546 | None:intergenic |
| TACCAGCATGAATTTGATAG+CGG | 0.613927 | 1.1:-76062858 | None:intergenic |
| TCAAGAACAGGAATTGATGG+TGG | 0.622681 | 1.1:-76057585 | None:intergenic |
| CGTTCGTAAGCTAATATCAG+AGG | 0.625420 | 1.1:+76059497 | MS.gene93411:CDS |
| CTTCTGGAAAATCTCCAGAT+GGG | 0.635992 | 1.1:-76057614 | None:intergenic |
| CGTAAGCTAATATCAGAGGA+TGG | 0.640250 | 1.1:+76059501 | MS.gene93411:CDS |
| AGTCTTATCTCCGGAATTGG+GGG | 0.643385 | 1.1:-76060086 | None:intergenic |
| CCTTTCACGTCACATAGGGG+AGG | 0.648561 | 1.1:-76063559 | None:intergenic |
| AGGCGATATTTAGATCGCCT+AGG | 0.650391 | 1.1:+76063189 | MS.gene93411:CDS |
| CTTCCTTTCACGTCACATAG+GGG | 0.650914 | 1.1:-76063562 | None:intergenic |
| AAACATCGGGTTGAACGCCA+CGG | 0.651604 | 1.1:-76060296 | None:intergenic |
| AAATCTGTTCCCATTGTGAA+AGG | 0.658720 | 1.1:+76062880 | MS.gene93411:CDS |
| CTTATGGAGAACAACATCAG+AGG | 0.685730 | 1.1:+76058755 | MS.gene93411:CDS |
| AATTCAGAGAGCACCCTGTG+GGG | 0.705164 | 1.1:-76059545 | None:intergenic |
| TGTTGGTGCTGCAATTCAAG+AGG | 0.710293 | 1.1:+76061972 | MS.gene93411:CDS |
| TTGCAGCACCAACATCACAA+AGG | 0.716293 | 1.1:-76061963 | None:intergenic |
| CCAATTCAGAGAGCACCCTG+TGG | 0.742863 | 1.1:-76059547 | None:intergenic |
| TTAGCTCTAGGCAATCTCAG+CGG | 0.772254 | 1.1:-76063117 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACAATTATATATTG+TGG | - | chr1.1:76058646-76058665 | None:intergenic | 10.0% |
| !! | AAAAAAATAAAAAAAATGAG+TGG | - | chr1.1:76062707-76062726 | None:intergenic | 10.0% |
| !! | AAAAAATAAAAAAAATGAGT+GGG | - | chr1.1:76062706-76062725 | None:intergenic | 10.0% |
| !!! | AATTTTCTATAAACAAAATA+GGG | + | chr1.1:76062400-76062419 | MS.gene93411:intron | 10.0% |
| !! | AACAAGTAAATATTAATGTA+AGG | - | chr1.1:76063488-76063507 | None:intergenic | 15.0% |
| !! | ACTAATACCATATTAAAATT+TGG | - | chr1.1:76057995-76058014 | None:intergenic | 15.0% |
| !! | ATATTAAAAAACGGTTTAAT+TGG | - | chr1.1:76061887-76061906 | None:intergenic | 15.0% |
| !! | ATTCTTAAAGATGAAAAATT+CGG | - | chr1.1:76061515-76061534 | None:intergenic | 15.0% |
| !! | CTAATACCATATTAAAATTT+GGG | - | chr1.1:76057994-76058013 | None:intergenic | 15.0% |
| !! | TAGTTTATGAAAAAATAAAG+TGG | + | chr1.1:76058902-76058921 | MS.gene93411:intron | 15.0% |
| !!! | AAACTCTTTTATATTTATGT+TGG | + | chr1.1:76058715-76058734 | MS.gene93411:intron | 15.0% |
| !!! | CAATTTTCTATAAACAAAAT+AGG | + | chr1.1:76062399-76062418 | MS.gene93411:intron | 15.0% |
| !!! | CTATTTTGTTTATAGAAAAT+TGG | - | chr1.1:76062401-76062420 | None:intergenic | 15.0% |
| !!! | TTCTTTGTTATCAAATTAAA+GGG | + | chr1.1:76062134-76062153 | MS.gene93411:intron | 15.0% |
| !!! | TTTCTTTGTTATCAAATTAA+AGG | + | chr1.1:76062133-76062152 | MS.gene93411:intron | 15.0% |
| !! | AAAAAATTTAGATGCCAATA+TGG | - | chr1.1:76062444-76062463 | None:intergenic | 20.0% |
| !! | AAAACAATTATATATTGTGG+CGG | - | chr1.1:76058643-76058662 | None:intergenic | 20.0% |
| !! | AAAAGATTTGAAAAGAAAAG+TGG | + | chr1.1:76062272-76062291 | MS.gene93411:intron | 20.0% |
| !! | ATAAAAAATAAGTGTTTCCT+TGG | - | chr1.1:76059231-76059250 | None:intergenic | 20.0% |
| !! | ATCAAAGAAAAAGATAAAAG+AGG | - | chr1.1:76057755-76057774 | None:intergenic | 20.0% |
| !! | ATTAAAATTGCATGTTGTAA+TGG | + | chr1.1:76063315-76063334 | MS.gene93411:intron | 20.0% |
| !! | ATTAGGAGAATAATCATTAA+AGG | - | chr1.1:76057490-76057509 | None:intergenic | 20.0% |
| !! | ATTTCCGTATTAATATAAGA+AGG | - | chr1.1:76059176-76059195 | None:intergenic | 20.0% |
| !! | CTTTCCTTCTTATATTAATA+CGG | + | chr1.1:76059169-76059188 | MS.gene93411:intron | 20.0% |
| !! | TCAAAGAAAAAGATAAAAGA+GGG | - | chr1.1:76057754-76057773 | None:intergenic | 20.0% |
| !!! | AAGGATTCAGATTTTTTAAT+TGG | + | chr1.1:76059902-76059921 | MS.gene93411:intron | 20.0% |
| !!! | AAGGGTTTTGTTTTTTATTA+TGG | + | chr1.1:76059991-76060010 | MS.gene93411:intron | 20.0% |
| !!! | AATTATATATTGGTTTCTGA+AGG | - | chr1.1:76058800-76058819 | None:intergenic | 20.0% |
| !!! | ATTAAACTATTTGTTTTCCA+GGG | + | chr1.1:76060048-76060067 | MS.gene93411:intron | 20.0% |
| !!! | CAAATCTTTTCTATATACAT+GGG | - | chr1.1:76062262-76062281 | None:intergenic | 20.0% |
| !!! | GAATATTGATTATAAGTGAA+AGG | + | chr1.1:76058144-76058163 | MS.gene93411:intron | 20.0% |
| !!! | TAAACCGTTTTTTAATATGT+TGG | + | chr1.1:76061889-76061908 | MS.gene93411:intron | 20.0% |
| !!! | TAATACATGGAATATTTTTC+TGG | + | chr1.1:76060162-76060181 | MS.gene93411:intron | 20.0% |
| !!! | TCAAATCTTTTCTATATACA+TGG | - | chr1.1:76062263-76062282 | None:intergenic | 20.0% |
| !!! | TCTTTGTTATCAAATTAAAG+GGG | + | chr1.1:76062135-76062154 | MS.gene93411:intron | 20.0% |
| !!! | TGACATTTTCATGAAAATTT+GGG | + | chr1.1:76057695-76057714 | MS.gene93411:intron | 20.0% |
| !!! | TGTCTTCATTTTATGTTATT+TGG | + | chr1.1:76062059-76062078 | MS.gene93411:intron | 20.0% |
| !!! | TTTTTGTCACTCTAAATTTT+GGG | - | chr1.1:76057839-76057858 | None:intergenic | 20.0% |
| !!! | TTTTTTGTCACTCTAAATTT+TGG | - | chr1.1:76057840-76057859 | None:intergenic | 20.0% |
| ! | AAAAAACTGATGTTTGTATG+TGG | + | chr1.1:76057854-76057873 | MS.gene93411:intron | 25.0% |
| ! | AAAAACTGATGTTTGTATGT+GGG | + | chr1.1:76057855-76057874 | MS.gene93411:intron | 25.0% |
| ! | AAACAATTATATATTGTGGC+GGG | - | chr1.1:76058642-76058661 | None:intergenic | 25.0% |
| ! | AACTATCTCAAAGTTAACTT+TGG | - | chr1.1:76059028-76059047 | None:intergenic | 25.0% |
| ! | AATATAAGTGAAACCAATGA+AGG | + | chr1.1:76058466-76058485 | MS.gene93411:intron | 25.0% |
| ! | ACTATCTCAAAGTTAACTTT+GGG | - | chr1.1:76059027-76059046 | None:intergenic | 25.0% |
| ! | ACTTAATACCAAATCAATGT+AGG | - | chr1.1:76061404-76061423 | None:intergenic | 25.0% |
| ! | AGGAAAGCAAAATTTAACAA+TGG | - | chr1.1:76059156-76059175 | None:intergenic | 25.0% |
| ! | AGTTCAAACAGAAAATATGT+CGG | - | chr1.1:76061837-76061856 | None:intergenic | 25.0% |
| ! | ATAGAATGAAATGTGGAATA+TGG | - | chr1.1:76058328-76058347 | None:intergenic | 25.0% |
| ! | ATATGGAAACAAAATGAGTA+TGG | - | chr1.1:76058680-76058699 | None:intergenic | 25.0% |
| ! | ATCATATCTATAGTCAATGT+TGG | - | chr1.1:76061119-76061138 | None:intergenic | 25.0% |
| ! | ATGCAAAGAAGTTATATCAA+AGG | + | chr1.1:76063627-76063646 | MS.gene93411:CDS | 25.0% |
| ! | ATTCACTAAATGTTATGTTC+AGG | + | chr1.1:76063027-76063046 | MS.gene93411:intron | 25.0% |
| ! | ATTTCTATGCTAGTAACTTA+TGG | + | chr1.1:76058739-76058758 | MS.gene93411:intron | 25.0% |
| ! | CACTTATTTAAACCTATACA+GGG | - | chr1.1:76062664-76062683 | None:intergenic | 25.0% |
| ! | CTAAAACTAAACTCTAATAC+TGG | + | chr1.1:76061430-76061449 | MS.gene93411:intron | 25.0% |
| ! | GATGATGAGAAATGAAAATA+AGG | - | chr1.1:76059199-76059218 | None:intergenic | 25.0% |
| ! | GGAACCAACATATTAAAAAA+CGG | - | chr1.1:76061896-76061915 | None:intergenic | 25.0% |
| ! | GTGATCTTAGTAAAAGATAA+AGG | - | chr1.1:76060747-76060766 | None:intergenic | 25.0% |
| ! | TATGGAAACAAAATGAGTAT+GGG | - | chr1.1:76058679-76058698 | None:intergenic | 25.0% |
| ! | TCACTTATTTAAACCTATAC+AGG | - | chr1.1:76062665-76062684 | None:intergenic | 25.0% |
| ! | TCTAATACCAAATTAGAAGT+TGG | - | chr1.1:76061297-76061316 | None:intergenic | 25.0% |
| ! | TGACACTTCTTGAATAAAAA+AGG | + | chr1.1:76059773-76059792 | MS.gene93411:intron | 25.0% |
| ! | TGCAAAGAAGTTATATCAAA+GGG | + | chr1.1:76063628-76063647 | MS.gene93411:CDS | 25.0% |
| ! | TTCAAAACCAAATTAGAAGT+TGG | - | chr1.1:76061247-76061266 | None:intergenic | 25.0% |
| ! | TTCACTAAATGTTATGTTCA+GGG | + | chr1.1:76063028-76063047 | MS.gene93411:intron | 25.0% |
| ! | TTGAAAGTTCAAACAGAATA+TGG | - | chr1.1:76058697-76058716 | None:intergenic | 25.0% |
| !! | AACATTGACTGTTCATTATT+TGG | + | chr1.1:76058927-76058946 | MS.gene93411:intron | 25.0% |
| !! | AACTGAACTTGTTTGTTAAT+TGG | - | chr1.1:76060528-76060547 | None:intergenic | 25.0% |
| !! | AATGGTGTCAATTGATTATT+TGG | + | chr1.1:76062633-76062652 | MS.gene93411:intron | 25.0% |
| !! | ACTGAACTTGTTTGTTAATT+GGG | - | chr1.1:76060527-76060546 | None:intergenic | 25.0% |
| !! | ATTGGTTTCACTTATATTTG+AGG | - | chr1.1:76058464-76058483 | None:intergenic | 25.0% |
| !! | CTGACATTTTCATGAAAATT+TGG | + | chr1.1:76057694-76057713 | MS.gene93411:intron | 25.0% |
| !! | CTTTGTTATCAAATTAAAGG+GGG | + | chr1.1:76062136-76062155 | MS.gene93411:intron | 25.0% |
| !! | TAAAAAGTACATATGTTCCA+TGG | + | chr1.1:76059309-76059328 | MS.gene93411:intron | 25.0% |
| !!! | ACATTGATTTGGTATTAAGT+TGG | + | chr1.1:76061404-76061423 | MS.gene93411:intron | 25.0% |
| !!! | ATTGATTTGGTATTAAGTTG+GGG | + | chr1.1:76061406-76061425 | MS.gene93411:intron | 25.0% |
| !!! | CAGTATTAGAGTTTAGTTTT+AGG | - | chr1.1:76061432-76061451 | None:intergenic | 25.0% |
| !!! | CATTAAACTATTTGTTTTCC+AGG | + | chr1.1:76060047-76060066 | MS.gene93411:intron | 25.0% |
| !!! | CATTGATTTGGTATTAAGTT+GGG | + | chr1.1:76061405-76061424 | MS.gene93411:intron | 25.0% |
| !!! | GATTGGAGATTTTTAGTTAA+CGG | - | chr1.1:76059806-76059825 | None:intergenic | 25.0% |
| !!! | GTTCAACCCAAATTTTAATA+TGG | + | chr1.1:76057985-76058004 | MS.gene93411:intron | 25.0% |
| !!! | TCATTATTCATAGCTTTGAT+GGG | + | chr1.1:76063359-76063378 | MS.gene93411:intron | 25.0% |
| !!! | TGGTTTTGAACTTGTTTTTT+GGG | + | chr1.1:76061257-76061276 | MS.gene93411:intron | 25.0% |
| !!! | TTCATTATTCATAGCTTTGA+TGG | + | chr1.1:76063358-76063377 | MS.gene93411:intron | 25.0% |
| !!! | TTGGTTTTGAACTTGTTTTT+TGG | + | chr1.1:76061256-76061275 | MS.gene93411:intron | 25.0% |
| !!! | TTTTCTGGATTTGTTTTTCT+GGG | + | chr1.1:76060177-76060196 | MS.gene93411:intron | 25.0% |
| !!! | TTTTTCTGGATTTGTTTTTC+TGG | + | chr1.1:76060176-76060195 | MS.gene93411:intron | 25.0% |
| AAAACTGATGTTTGTATGTG+GGG | + | chr1.1:76057856-76057875 | MS.gene93411:intron | 30.0% | |
| AAACACCAGAAAATCTCATT+TGG | + | chr1.1:76060959-76060978 | MS.gene93411:intron | 30.0% | |
| AAACACTTTCCTATAAAGCT+TGG | + | chr1.1:76061173-76061192 | MS.gene93411:intron | 30.0% | |
| AAACTACTCATCAAAACACA+GGG | - | chr1.1:76058888-76058907 | None:intergenic | 30.0% | |
| AAAGTCAAATACAGAAGCTT+AGG | - | chr1.1:76060925-76060944 | None:intergenic | 30.0% | |
| AAATGTTATGTTCAGGGAAA+GGG | + | chr1.1:76063034-76063053 | MS.gene93411:intron | 30.0% | |
| AACACTTTCCTATAAAGCTT+GGG | + | chr1.1:76061174-76061193 | MS.gene93411:intron | 30.0% | |
| AAGAAAACTAAAAGCAAGTG+AGG | + | chr1.1:76057454-76057473 | MS.gene93411:intron | 30.0% | |
| AATTTGAATGGACATAGCAT+TGG | + | chr1.1:76062835-76062854 | MS.gene93411:CDS | 30.0% | |
| ACCATGAAAAATCATCTTTG+AGG | - | chr1.1:76058505-76058524 | None:intergenic | 30.0% | |
| AGAAAACTAAAAGCAAGTGA+GGG | + | chr1.1:76057455-76057474 | MS.gene93411:intron | 30.0% | |
| AGACATCTTGAACATAACTT+GGG | - | chr1.1:76058068-76058087 | None:intergenic | 30.0% | |
| AGGAGAGACTAAATACTTAA+TGG | + | chr1.1:76063209-76063228 | MS.gene93411:CDS | 30.0% | |
| ATAATTTAACCTCACGAAAC+TGG | - | chr1.1:76057965-76057984 | None:intergenic | 30.0% | |
| ATATGTTCCATGGTAAATCA+TGG | + | chr1.1:76059319-76059338 | MS.gene93411:intron | 30.0% | |
| ATCTAAATATCGCCTACAAA+AGG | - | chr1.1:76063184-76063203 | None:intergenic | 30.0% | |
| ATCTATCTGACACATAATAC+TGG | - | chr1.1:76062767-76062786 | None:intergenic | 30.0% | |
| CAAGTTCTTGATCAATTTCA+TGG | - | chr1.1:76060618-76060637 | None:intergenic | 30.0% | |
| CACTTCTTGAATAAAAAAGG+TGG | + | chr1.1:76059776-76059795 | MS.gene93411:intron | 30.0% | |
| CATAAATGCATGTATTAGAG+AGG | + | chr1.1:76059725-76059744 | MS.gene93411:intron | 30.0% | |
| CGACGAACTGAATTATATAT+TGG | - | chr1.1:76058810-76058829 | None:intergenic | 30.0% | |
| CTTTATTCAACTACTTGTCA+AGG | + | chr1.1:76060236-76060255 | MS.gene93411:intron | 30.0% | |
| GAAGGACAAAATGATAACTT+CGG | - | chr1.1:76057525-76057544 | None:intergenic | 30.0% | |
| GACTGTTCATTATTTGGATA+GGG | + | chr1.1:76058933-76058952 | MS.gene93411:intron | 30.0% | |
| GATATAACTTCTTTGCATGT+TGG | - | chr1.1:76063625-76063644 | None:intergenic | 30.0% | |
| GATTGTGTGAAATAATGCTA+AGG | + | chr1.1:76060805-76060824 | MS.gene93411:intron | 30.0% | |
| GCTTCTCAAAATATAAGCTT+TGG | - | chr1.1:76058401-76058420 | None:intergenic | 30.0% | |
| GGTGTTAGACATTGTTATAT+TGG | + | chr1.1:76062983-76063002 | MS.gene93411:intron | 30.0% | |
| GGTTGTTACAATAGATGATA+CGG | + | chr1.1:76060826-76060845 | MS.gene93411:intron | 30.0% | |
| GTTAGTGATAGAATGAAATG+TGG | - | chr1.1:76058335-76058354 | None:intergenic | 30.0% | |
| GTTGAAATACACGAATACTT+AGG | - | chr1.1:76058251-76058270 | None:intergenic | 30.0% | |
| TAAACTACTCATCAAAACAC+AGG | - | chr1.1:76058889-76058908 | None:intergenic | 30.0% | |
| TAAACTCTAATACTGGTATG+TGG | + | chr1.1:76061437-76061456 | MS.gene93411:intron | 30.0% | |
| TAAATGTTATGTTCAGGGAA+AGG | + | chr1.1:76063033-76063052 | MS.gene93411:intron | 30.0% | |
| TAATGGTGCAAAAATGAAGT+TGG | - | chr1.1:76058528-76058547 | None:intergenic | 30.0% | |
| TACATGAAAAACTTTGACGT+TGG | + | chr1.1:76063087-76063106 | MS.gene93411:CDS | 30.0% | |
| TAGACATCTTGAACATAACT+TGG | - | chr1.1:76058069-76058088 | None:intergenic | 30.0% | |
| TAGGTTCGGAAATATATGAA+AGG | + | chr1.1:76059420-76059439 | MS.gene93411:intron | 30.0% | |
| TATAACACCATGATTTACCA+TGG | - | chr1.1:76059329-76059348 | None:intergenic | 30.0% | |
| TGACTGTTCATTATTTGGAT+AGG | + | chr1.1:76058932-76058951 | MS.gene93411:intron | 30.0% | |
| TGTTTAATCAATGCACTTCT+TGG | - | chr1.1:76058577-76058596 | None:intergenic | 30.0% | |
| TTAAGTATTTAGTCTCTCCT+AGG | - | chr1.1:76063209-76063228 | None:intergenic | 30.0% | |
| TTCGGCAAAAATGTAGTATT+AGG | - | chr1.1:76057507-76057526 | None:intergenic | 30.0% | |
| TTCTATGCAATTGAAACCTT+CGG | + | chr1.1:76062934-76062953 | MS.gene93411:CDS | 30.0% | |
| TTCTGAATGTTGGATGATAA+AGG | + | chr1.1:76059627-76059646 | MS.gene93411:intron | 30.0% | |
| ! | AAATTTTACACTCTACCTCA+AGG | - | chr1.1:76060873-76060892 | None:intergenic | 30.0% |
| ! | AAGAGTATACGGAATTTGAA+TGG | + | chr1.1:76062823-76062842 | MS.gene93411:CDS | 30.0% |
| ! | AAGTTTGTTTGTCTCTGAAT+AGG | + | chr1.1:76059401-76059420 | MS.gene93411:intron | 30.0% |
| ! | ATGGTTTCTTTTCTGAATGT+TGG | + | chr1.1:76059617-76059636 | MS.gene93411:intron | 30.0% |
| ! | CAATTCCAAATGAGATTTTC+TGG | - | chr1.1:76060967-76060986 | None:intergenic | 30.0% |
| ! | CAGAAAATCTCATTTGGAAT+TGG | + | chr1.1:76060965-76060984 | MS.gene93411:intron | 30.0% |
| ! | CATTGATTAAACACTTGCTA+GGG | + | chr1.1:76058584-76058603 | MS.gene93411:intron | 30.0% |
| ! | GAAAAGAAAAGTGGATTCAT+TGG | + | chr1.1:76062281-76062300 | MS.gene93411:intron | 30.0% |
| ! | GTTTCACTTATATTTGAGGT+GGG | - | chr1.1:76058460-76058479 | None:intergenic | 30.0% |
| ! | TATTTTCTGTTTGAACTGTG+TGG | + | chr1.1:76061840-76061859 | MS.gene93411:intron | 30.0% |
| ! | TCATTGCAGTTAAGAGTATA+CGG | + | chr1.1:76062812-76062831 | MS.gene93411:intron | 30.0% |
| ! | TCCTCAAAGATGATTTTTCA+TGG | + | chr1.1:76058501-76058520 | MS.gene93411:intron | 30.0% |
| ! | TCTCTCTTAGAATTTGGTTT+GGG | - | chr1.1:76058212-76058231 | None:intergenic | 30.0% |
| ! | TCTGTATTTGACTTTAATGC+TGG | + | chr1.1:76060930-76060949 | MS.gene93411:intron | 30.0% |
| ! | TGACTGTCTGTTATGTTTTA+TGG | + | chr1.1:76059598-76059617 | MS.gene93411:intron | 30.0% |
| !! | CTTCATTTTTGCACCATTAA+CGG | + | chr1.1:76058529-76058548 | MS.gene93411:intron | 30.0% |
| !! | TATTTTTAACAGTGAGGCTT+CGG | - | chr1.1:76057816-76057835 | None:intergenic | 30.0% |
| !! | TATTTTTACTCCATATCCCT+TGG | + | chr1.1:76063408-76063427 | MS.gene93411:intron | 30.0% |
| !! | TTCATTTTTGCACCATTAAC+GGG | + | chr1.1:76058530-76058549 | MS.gene93411:intron | 30.0% |
| !! | TTTCTGGATTTGTTTTTCTG+GGG | + | chr1.1:76060178-76060197 | MS.gene93411:intron | 30.0% |
| !! | TTTGGGTATTTTTAACAGTG+AGG | - | chr1.1:76057822-76057841 | None:intergenic | 30.0% |
| !!! | ACCCTTTGAACTAGTTTTTT+GGG | + | chr1.1:76061205-76061224 | MS.gene93411:intron | 30.0% |
| !!! | TTTGTTTTTCTGGGGTAATT+CGG | + | chr1.1:76060186-76060205 | MS.gene93411:intron | 30.0% |
| !!! | TTTTTTAACATCAGCAACTG+AGG | + | chr1.1:76057775-76057794 | MS.gene93411:intron | 30.0% |
| AAAACCCTTTCCTACTAGAT+AGG | - | chr1.1:76059980-76059999 | None:intergenic | 35.0% | |
| AAACCCTTTCCTACTAGATA+GGG | - | chr1.1:76059979-76059998 | None:intergenic | 35.0% | |
| AAACTGATGTTTGTATGTGG+GGG | + | chr1.1:76057857-76057876 | MS.gene93411:intron | 35.0% | |
| AAATCTGTTCCCATTGTGAA+AGG | + | chr1.1:76062880-76062899 | MS.gene93411:CDS | 35.0% | |
| AACACATCACTATCCAATGT+AGG | - | chr1.1:76058122-76058141 | None:intergenic | 35.0% | |
| AACTTGAGTATCCAACTCAT+AGG | - | chr1.1:76059386-76059405 | None:intergenic | 35.0% | |
| AAGTACCTTAATACCCGTAT+AGG | - | chr1.1:76060353-76060372 | None:intergenic | 35.0% | |
| AAGTGGACGGAATATTAATG+TGG | + | chr1.1:76058976-76058995 | MS.gene93411:intron | 35.0% | |
| AATAAAGAGGGAAAAGTGGA+CGG | + | chr1.1:76058963-76058982 | MS.gene93411:intron | 35.0% | |
| AATAGCCATGTCTAGAAACA+CGG | - | chr1.1:76058305-76058324 | None:intergenic | 35.0% | |
| AATCAATGCACTTCTTGGTT+TGG | - | chr1.1:76058572-76058591 | None:intergenic | 35.0% | |
| AATGTAGTGACAGCATGTTA+AGG | - | chr1.1:76062479-76062498 | None:intergenic | 35.0% | |
| ACACATAACATTGTTTCAGC+AGG | - | chr1.1:76060462-76060481 | None:intergenic | 35.0% | |
| ACAGATTCATTCCACTCAAA+TGG | - | chr1.1:76057729-76057748 | None:intergenic | 35.0% | |
| ACAGTACAAGAGAGTTATTG+TGG | - | chr1.1:76060900-76060919 | None:intergenic | 35.0% | |
| AGATCAAGAACAGGAATTGA+TGG | - | chr1.1:76057591-76057610 | None:intergenic | 35.0% | |
| AGATGAAAAATTCGGCTCTA+AGG | - | chr1.1:76061507-76061526 | None:intergenic | 35.0% | |
| AGCCCAAAAAACTAGTTCAA+AGG | - | chr1.1:76061210-76061229 | None:intergenic | 35.0% | |
| AGCCTAAACTGAAACCATAT+TGG | + | chr1.1:76062427-76062446 | MS.gene93411:intron | 35.0% | |
| AGGAAATAAAGAGGGAAAAG+TGG | + | chr1.1:76058959-76058978 | MS.gene93411:intron | 35.0% | |
| ATACGAGGAACTTTCTGTAA+TGG | + | chr1.1:76062615-76062634 | MS.gene93411:intron | 35.0% | |
| ATAGGGAAGAGGAAATAAAG+AGG | + | chr1.1:76058950-76058969 | MS.gene93411:intron | 35.0% | |
| ATCCACATGCTAATATTGGA+AGG | + | chr1.1:76060689-76060708 | MS.gene93411:intron | 35.0% | |
| ATCTCAAAGTTAACTTTGGG+AGG | - | chr1.1:76059024-76059043 | None:intergenic | 35.0% | |
| ATCTCATCAACCAGAAACAT+GGG | - | chr1.1:76061096-76061115 | None:intergenic | 35.0% | |
| ATGACTTAACATCTAGACCA+TGG | - | chr1.1:76061358-76061377 | None:intergenic | 35.0% | |
| ATGATATCACTGTCCAATGT+AGG | - | chr1.1:76057899-76057918 | None:intergenic | 35.0% | |
| ATGGTCTAGATGTTAAGTCA+TGG | + | chr1.1:76061357-76061376 | MS.gene93411:intron | 35.0% | |
| ATGTTCAAGATGTCTAGTCT+TGG | + | chr1.1:76058073-76058092 | MS.gene93411:intron | 35.0% | |
| CAACGATAAACTCTCAAGAT+TGG | - | chr1.1:76059823-76059842 | None:intergenic | 35.0% | |
| CCATGTATTACCATCTATGT+GGG | - | chr1.1:76060152-76060171 | None:intergenic | 35.0% | |
| CCTATGAGGTTGAGATTAAT+GGG | + | chr1.1:76062004-76062023 | MS.gene93411:CDS | 35.0% | |
| CTCCAATGTTTCACATAAGT+CGG | - | chr1.1:76059472-76059491 | None:intergenic | 35.0% | |
| CTGGTAATAGTAGCTTCTTT+AGG | + | chr1.1:76062962-76062981 | MS.gene93411:intron | 35.0% | |
| GAGTATCCACATGCTAATAT+TGG | + | chr1.1:76060685-76060704 | MS.gene93411:intron | 35.0% | |
| GCATGTGGATACTCTAAATA+AGG | - | chr1.1:76060679-76060698 | None:intergenic | 35.0% | |
| GCCCAAAAAACTAGTTCAAA+GGG | - | chr1.1:76061209-76061228 | None:intergenic | 35.0% | |
| GGTTTCACTTATATTTGAGG+TGG | - | chr1.1:76058461-76058480 | None:intergenic | 35.0% | |
| GTCTAGTCCAACTTCTAATT+TGG | + | chr1.1:76061237-76061256 | MS.gene93411:intron | 35.0% | |
| GTCTCTCTTAGAATTTGGTT+TGG | - | chr1.1:76058213-76058232 | None:intergenic | 35.0% | |
| TAAAGGATCAACAATAGCAC+AGG | + | chr1.1:76059644-76059663 | MS.gene93411:intron | 35.0% | |
| TAACAAGAACTTCTCCACTT+TGG | + | chr1.1:76063158-76063177 | MS.gene93411:CDS | 35.0% | |
| TAACTTCCACTCTCAAAAGT+CGG | + | chr1.1:76060558-76060577 | MS.gene93411:intron | 35.0% | |
| TAACTTCTTTGCATGTTGGT+CGG | - | chr1.1:76063621-76063640 | None:intergenic | 35.0% | |
| TAAGTGTTTCCTTGGTTGAA+AGG | - | chr1.1:76059223-76059242 | None:intergenic | 35.0% | |
| TACACATCTGACATATCCAA+TGG | + | chr1.1:76061036-76061055 | MS.gene93411:intron | 35.0% | |
| TACCAGCATGAATTTGATAG+CGG | - | chr1.1:76062861-76062880 | None:intergenic | 35.0% | |
| TAGGGAAGAGGAAATAAAGA+GGG | + | chr1.1:76058951-76058970 | MS.gene93411:intron | 35.0% | |
| TAGTAGAAAAGCAGTTTCGT+CGG | - | chr1.1:76060410-76060429 | None:intergenic | 35.0% | |
| TATGACATGGCTTACCATTT+AGG | + | chr1.1:76061921-76061940 | MS.gene93411:intron | 35.0% | |
| TCATTATTTGGATAGGGAAG+AGG | + | chr1.1:76058939-76058958 | MS.gene93411:intron | 35.0% | |
| TCATTCTTGCATGTGATTGT+AGG | + | chr1.1:76062582-76062601 | MS.gene93411:intron | 35.0% | |
| TCCATGTATTACCATCTATG+TGG | - | chr1.1:76060153-76060172 | None:intergenic | 35.0% | |
| TCCTATGAGGTTGAGATTAA+TGG | + | chr1.1:76062003-76062022 | MS.gene93411:CDS | 35.0% | |
| TCTATGCAATTGAAACCTTC+GGG | + | chr1.1:76062935-76062954 | MS.gene93411:CDS | 35.0% | |
| TCTCACTTATAACCACCATT+CGG | - | chr1.1:76057922-76057941 | None:intergenic | 35.0% | |
| TGATATCACTGTCCAATGTA+GGG | - | chr1.1:76057898-76057917 | None:intergenic | 35.0% | |
| TGCATTTGTCCTTAAACTAG+CGG | + | chr1.1:76061536-76061555 | MS.gene93411:intron | 35.0% | |
| TGCCAATATGGTTTCAGTTT+AGG | - | chr1.1:76062432-76062451 | None:intergenic | 35.0% | |
| TGCTAATATTGGAAGGAATG+TGG | + | chr1.1:76060696-76060715 | MS.gene93411:intron | 35.0% | |
| TGGTCTAGATGTTAAGTCAT+GGG | + | chr1.1:76061358-76061377 | MS.gene93411:intron | 35.0% | |
| TGTTTCAGCAGGTAGTATTT+AGG | - | chr1.1:76060451-76060470 | None:intergenic | 35.0% | |
| TGTTTGTCTCTGAATAGGTT+CGG | + | chr1.1:76059406-76059425 | MS.gene93411:intron | 35.0% | |
| TTCAAGCACTTTGTGAATGT+GGG | - | chr1.1:76059101-76059120 | None:intergenic | 35.0% | |
| TTCCTTCCAATATTAGCATG+TGG | - | chr1.1:76060694-76060713 | None:intergenic | 35.0% | |
| TTGGGAGGAATGAAAAACAT+GGG | - | chr1.1:76059009-76059028 | None:intergenic | 35.0% | |
| TTGGTTCCTTCAATATGACA+TGG | + | chr1.1:76061908-76061927 | MS.gene93411:intron | 35.0% | |
| TTTCAAGCACTTTGTGAATG+TGG | - | chr1.1:76059102-76059121 | None:intergenic | 35.0% | |
| TTTGGGAGGAATGAAAAACA+TGG | - | chr1.1:76059010-76059029 | None:intergenic | 35.0% | |
| TTTGGGTCTCTCTTAGAATT+TGG | - | chr1.1:76058218-76058237 | None:intergenic | 35.0% | |
| ! | AAATCTCATTTGGAATTGGC+AGG | + | chr1.1:76060969-76060988 | MS.gene93411:intron | 35.0% |
| ! | AATATCCTACCGCTAGTTTA+AGG | - | chr1.1:76061548-76061567 | None:intergenic | 35.0% |
| ! | AATTTCTCCCCTAACCTTTT+AGG | - | chr1.1:76061064-76061083 | None:intergenic | 35.0% |
| ! | ATTAATGGGAAGGTGTATCA+AGG | + | chr1.1:76062018-76062037 | MS.gene93411:CDS | 35.0% |
| ! | ATTTCTCCCCTAACCTTTTA+GGG | - | chr1.1:76061063-76061082 | None:intergenic | 35.0% |
| ! | CGTCAAAGTTTTTCATGTAG+TGG | - | chr1.1:76063086-76063105 | None:intergenic | 35.0% |
| ! | CTCTGATATTAGCTTACGAA+CGG | - | chr1.1:76059499-76059518 | None:intergenic | 35.0% |
| ! | CTTTGATTTCTGTTTGTGGA+TGG | + | chr1.1:76061578-76061597 | MS.gene93411:intron | 35.0% |
| ! | GAGATTTTCCATTTCCGATA+TGG | + | chr1.1:76061605-76061624 | MS.gene93411:intron | 35.0% |
| ! | GATGTGATGAAGTTGGATTT+TGG | + | chr1.1:76060124-76060143 | MS.gene93411:CDS | 35.0% |
| ! | GCTTCTTTGATTTCTGTTTG+TGG | + | chr1.1:76061574-76061593 | MS.gene93411:intron | 35.0% |
| ! | GTATGATGATGTGATGAAGT+TGG | + | chr1.1:76060117-76060136 | MS.gene93411:CDS | 35.0% |
| ! | GTTATCATTTTGTCCTTCTG+TGG | + | chr1.1:76057527-76057546 | MS.gene93411:intron | 35.0% |
| ! | TATTTGGTTCAACCCTGTAT+AGG | + | chr1.1:76062649-76062668 | MS.gene93411:intron | 35.0% |
| ! | TTGTCAAGGATTTTCTTTGC+AGG | + | chr1.1:76060250-76060269 | MS.gene93411:intron | 35.0% |
| ! | TTTTCCATTTCCGATATGGT+TGG | + | chr1.1:76061609-76061628 | MS.gene93411:intron | 35.0% |
| !! | AATAACAGACTGATAGTGGA+TGG | - | chr1.1:76058039-76058058 | None:intergenic | 35.0% |
| !! | ATGAAAGGCATTATAAAGCC+TGG | + | chr1.1:76059435-76059454 | MS.gene93411:CDS | 35.0% |
| !! | ATGTCTAGTCTTGGATACAA+GGG | + | chr1.1:76058082-76058101 | MS.gene93411:intron | 35.0% |
| !! | GCATTGATTAAACACTTGCT+AGG | + | chr1.1:76058583-76058602 | MS.gene93411:intron | 35.0% |
| !!! | AACTGTGTGGTGTGTTATTT+TGG | + | chr1.1:76061853-76061872 | MS.gene93411:intron | 35.0% |
| !!! | AACTTGTTTTTTGGGCTGTT+AGG | + | chr1.1:76061265-76061284 | MS.gene93411:intron | 35.0% |
| !!! | ACTGTGTGGTGTGTTATTTT+GGG | + | chr1.1:76061854-76061873 | MS.gene93411:intron | 35.0% |
| !!! | CACCCTTTGAACTAGTTTTT+TGG | + | chr1.1:76061204-76061223 | MS.gene93411:intron | 35.0% |
| !!! | TGATTTTTTCCCCATGTTTC+TGG | + | chr1.1:76061083-76061102 | MS.gene93411:intron | 35.0% |
| !!! | TTGTTTTTCTGGGGTAATTC+GGG | + | chr1.1:76060187-76060206 | MS.gene93411:intron | 35.0% |
| AACTCCAACCATATCGGAAA+TGG | - | chr1.1:76061616-76061635 | None:intergenic | 40.0% | |
| AACTGATGTTTGTATGTGGG+GGG | + | chr1.1:76057858-76057877 | MS.gene93411:intron | 40.0% | |
| AAGTTTGTCTGCCTATGAGT+TGG | + | chr1.1:76059372-76059391 | MS.gene93411:intron | 40.0% | |
| AATGGTCCCTAAAAGGTTAG+GGG | + | chr1.1:76061054-76061073 | MS.gene93411:intron | 40.0% | |
| ACATGCAAGAATGACACTGT+TGG | - | chr1.1:76062576-76062595 | None:intergenic | 40.0% | |
| ACTTAGGCTCGCATGTATTT+GGG | - | chr1.1:76058235-76058254 | None:intergenic | 40.0% | |
| AGCAACCTATACGGGTATTA+AGG | + | chr1.1:76060345-76060364 | MS.gene93411:CDS | 40.0% | |
| AGTGGATGGCCATACAAAAT+TGG | - | chr1.1:76058025-76058044 | None:intergenic | 40.0% | |
| ATAGATGATACGGTGAGAAC+TGG | + | chr1.1:76060836-76060855 | MS.gene93411:intron | 40.0% | |
| ATCCTAACAATAGTTGCGGT+AGG | - | chr1.1:76062344-76062363 | None:intergenic | 40.0% | |
| ATCCTACCGCAACTATTGTT+AGG | + | chr1.1:76062339-76062358 | MS.gene93411:intron | 40.0% | |
| ATGTACCAAGCATACAGAGT+TGG | - | chr1.1:76060772-76060791 | None:intergenic | 40.0% | |
| ATTGACATGTAACCTGCCAA+GGG | - | chr1.1:76063427-76063446 | None:intergenic | 40.0% | |
| CAACCCTATCTAGTAGGAAA+GGG | + | chr1.1:76059973-76059992 | MS.gene93411:intron | 40.0% | |
| CAATGGTCCCTAAAAGGTTA+GGG | + | chr1.1:76061053-76061072 | MS.gene93411:intron | 40.0% | |
| CATATCCAATGGTCCCTAAA+AGG | + | chr1.1:76061047-76061066 | MS.gene93411:intron | 40.0% | |
| CATCTTGAACATAACTTGGG+TGG | - | chr1.1:76058065-76058084 | None:intergenic | 40.0% | |
| CATGTTTGAGAGTCCTACAT+TGG | + | chr1.1:76058106-76058125 | MS.gene93411:intron | 40.0% | |
| CCCACATAGATGGTAATACA+TGG | + | chr1.1:76060149-76060168 | MS.gene93411:intron | 40.0% | |
| CCCATTAATCTCAACCTCAT+AGG | - | chr1.1:76062007-76062026 | None:intergenic | 40.0% | |
| CGTAAGCTAATATCAGAGGA+TGG | + | chr1.1:76059501-76059520 | MS.gene93411:CDS | 40.0% | |
| CGTTCGTAAGCTAATATCAG+AGG | + | chr1.1:76059497-76059516 | MS.gene93411:CDS | 40.0% | |
| CTAGCGGTAGGATATTATCT+AGG | + | chr1.1:76061552-76061571 | MS.gene93411:intron | 40.0% | |
| CTTATGGAGAACAACATCAG+AGG | + | chr1.1:76058755-76058774 | MS.gene93411:CDS | 40.0% | |
| GAATGGTGGTTATAAGTGAG+AGG | + | chr1.1:76057921-76057940 | MS.gene93411:intron | 40.0% | |
| GACGATCCTAACAATAGTTG+CGG | - | chr1.1:76062348-76062367 | None:intergenic | 40.0% | |
| GAGCTACAATCAAGAACTTG+TGG | + | chr1.1:76063278-76063297 | MS.gene93411:intron | 40.0% | |
| GATCTCATCAACCAGAAACA+TGG | - | chr1.1:76061097-76061116 | None:intergenic | 40.0% | |
| GATGGGTAAAGATCAAGAAC+AGG | - | chr1.1:76057600-76057619 | None:intergenic | 40.0% | |
| GCATGTATTAGAGAGGAAGT+TGG | + | chr1.1:76059732-76059751 | MS.gene93411:intron | 40.0% | |
| GCATTGTTCAGGTACGTTAT+AGG | + | chr1.1:76063256-76063275 | MS.gene93411:intron | 40.0% | |
| GCTCAATAACAGACTGATAG+TGG | - | chr1.1:76058043-76058062 | None:intergenic | 40.0% | |
| GGTAAGCCATGTCATATTGA+AGG | - | chr1.1:76061917-76061936 | None:intergenic | 40.0% | |
| GGTCTAGATGTTAAGTCATG+GGG | + | chr1.1:76061359-76061378 | MS.gene93411:intron | 40.0% | |
| GTCCGACTTATGTGAAACAT+TGG | + | chr1.1:76059467-76059486 | MS.gene93411:CDS | 40.0% | |
| GTCTACATGTACAGTGTCAA+AGG | - | chr1.1:76061685-76061704 | None:intergenic | 40.0% | |
| GTCTAGATGTTAAGTCATGG+GGG | + | chr1.1:76061360-76061379 | MS.gene93411:intron | 40.0% | |
| GTGGATGGCCATACAAAATT+GGG | - | chr1.1:76058024-76058043 | None:intergenic | 40.0% | |
| GTTCTTGATCTTTACCCATC+TGG | + | chr1.1:76057600-76057619 | MS.gene93411:CDS | 40.0% | |
| TAAATCCACTCACCCGTTAA+TGG | - | chr1.1:76058545-76058564 | None:intergenic | 40.0% | |
| TACTGCTGAATATCACCTTC+TGG | - | chr1.1:76057633-76057652 | None:intergenic | 40.0% | |
| TACTTAGGCTCGCATGTATT+TGG | - | chr1.1:76058236-76058255 | None:intergenic | 40.0% | |
| TAGTTGCGGTAGGATTATCA+CGG | - | chr1.1:76062334-76062353 | None:intergenic | 40.0% | |
| TCAAAACACAGGGTTAATGC+TGG | - | chr1.1:76058878-76058897 | None:intergenic | 40.0% | |
| TCAACCCTATCTAGTAGGAA+AGG | + | chr1.1:76059972-76059991 | MS.gene93411:intron | 40.0% | |
| TCAAGAACAGGAATTGATGG+TGG | - | chr1.1:76057588-76057607 | None:intergenic | 40.0% | |
| TCATCATCACCTTTCAACCA+AGG | + | chr1.1:76059211-76059230 | MS.gene93411:intron | 40.0% | |
| TCTCATATCACAAGCTGGTT+TGG | + | chr1.1:76058171-76058190 | MS.gene93411:intron | 40.0% | |
| TCTCATCAACCAGAAACATG+GGG | - | chr1.1:76061095-76061114 | None:intergenic | 40.0% | |
| TGACACTGTACATGTAGACA+TGG | + | chr1.1:76061686-76061705 | MS.gene93411:intron | 40.0% | |
| TGAGGTTGAGATTAATGGGA+AGG | + | chr1.1:76062008-76062027 | MS.gene93411:CDS | 40.0% | |
| TGGCCATACAAAATTGGGAT+AGG | - | chr1.1:76058019-76058038 | None:intergenic | 40.0% | |
| TGGGAGGAATGAAAAACATG+GGG | - | chr1.1:76059008-76059027 | None:intergenic | 40.0% | |
| TGTAGTCAACCCTATCTAGT+AGG | + | chr1.1:76059967-76059986 | MS.gene93411:intron | 40.0% | |
| TTCCGATATGGTTGGAGTTT+GGG | + | chr1.1:76061617-76061636 | MS.gene93411:intron | 40.0% | |
| TTGAAGAACTTGTGTGATGC+TGG | + | chr1.1:76063234-76063253 | MS.gene93411:CDS | 40.0% | |
| TTTCCGATATGGTTGGAGTT+TGG | + | chr1.1:76061616-76061635 | MS.gene93411:intron | 40.0% | |
| TTTGTCCTTAAACTAGCGGT+AGG | + | chr1.1:76061540-76061559 | MS.gene93411:intron | 40.0% | |
| ! | AACAGTCTTATCTCCGGAAT+TGG | - | chr1.1:76060092-76060111 | None:intergenic | 40.0% |
| ! | ACAACGCTACTTTCCTTCAT+TGG | - | chr1.1:76058482-76058501 | None:intergenic | 40.0% |
| ! | ACAGTCTTATCTCCGGAATT+GGG | - | chr1.1:76060091-76060110 | None:intergenic | 40.0% |
| ! | AGTTGATTGTGCTTTTACCG+TGG | + | chr1.1:76060279-76060298 | MS.gene93411:CDS | 40.0% |
| ! | ATCGATTCCAGCTTCCTAAA+TGG | - | chr1.1:76061938-76061957 | None:intergenic | 40.0% |
| ! | CTGAAGAACAGTCTTATCTC+CGG | - | chr1.1:76060098-76060117 | None:intergenic | 40.0% |
| ! | CTTCTGGAAAATCTCCAGAT+GGG | - | chr1.1:76057617-76057636 | None:intergenic | 40.0% |
| ! | GAGTATTGCCCAAGCTTTAT+AGG | - | chr1.1:76061185-76061204 | None:intergenic | 40.0% |
| ! | GCTAATAGTTGCTTAGCTCT+AGG | - | chr1.1:76063132-76063151 | None:intergenic | 40.0% |
| ! | GGTGACTCAGTAACAGATTT+TGG | - | chr1.1:76061326-76061345 | None:intergenic | 40.0% |
| ! | GTGCCTATCCCAATTTTGTA+TGG | + | chr1.1:76058013-76058032 | MS.gene93411:intron | 40.0% |
| ! | GTTGAGGTCCTACATTGATT+TGG | + | chr1.1:76061393-76061412 | MS.gene93411:intron | 40.0% |
| ! | TTAAAACCGACTCTTCGTAG+AGG | - | chr1.1:76059928-76059947 | None:intergenic | 40.0% |
| ! | TTTGGAACCATAAAGCCTTG+GGG | - | chr1.1:76058383-76058402 | None:intergenic | 40.0% |
| !! | AAGTTGGTAGAACCTAGGTT+GGG | + | chr1.1:76059748-76059767 | MS.gene93411:intron | 40.0% |
| !! | ATATCACAAGCTGGTTTGGT+GGG | + | chr1.1:76058175-76058194 | MS.gene93411:intron | 40.0% |
| !! | CTTTGGAACCATAAAGCCTT+GGG | - | chr1.1:76058384-76058403 | None:intergenic | 40.0% |
| !! | GATGTCTAGTCTTGGATACA+AGG | + | chr1.1:76058081-76058100 | MS.gene93411:intron | 40.0% |
| !!! | CTAGTTTTTTGGGCTGAGTT+AGG | + | chr1.1:76061215-76061234 | MS.gene93411:intron | 40.0% |
| ACTATTACCAGTTGACCCGA+AGG | - | chr1.1:76062953-76062972 | None:intergenic | 45.0% | |
| ACTCTACCTCAAGGAGTCAA+AGG | - | chr1.1:76060864-76060883 | None:intergenic | 45.0% | |
| ACTGATGTTTGTATGTGGGG+GGG | + | chr1.1:76057859-76057878 | MS.gene93411:intron | 45.0% | |
| AGAGCAGACAAAGATGGAAG+AGG | + | chr1.1:76062906-76062925 | MS.gene93411:CDS | 45.0% | |
| AGCAGACAAAGATGGAAGAG+GGG | + | chr1.1:76062908-76062927 | MS.gene93411:CDS | 45.0% | |
| AGCTTCCTTTCACGTCACAT+AGG | - | chr1.1:76063567-76063586 | None:intergenic | 45.0% | |
| AGGCGATATTTAGATCGCCT+AGG | + | chr1.1:76063189-76063208 | MS.gene93411:CDS | 45.0% | |
| ATGTAACCTGCCAAGGGATA+TGG | - | chr1.1:76063421-76063440 | None:intergenic | 45.0% | |
| ATGTGTACTCTAGTGTCTCG+AGG | - | chr1.1:76061023-76061042 | None:intergenic | 45.0% | |
| ATTGAAACCTTCGGGTCAAC+TGG | + | chr1.1:76062943-76062962 | MS.gene93411:CDS | 45.0% | |
| CACATCCAACTCTGTATGCT+TGG | + | chr1.1:76060764-76060783 | MS.gene93411:intron | 45.0% | |
| CAGTGATATCATCCGAATGG+TGG | + | chr1.1:76057907-76057926 | MS.gene93411:intron | 45.0% | |
| CATTGACATGTAACCTGCCA+AGG | - | chr1.1:76063428-76063447 | None:intergenic | 45.0% | |
| CCAATGGTCCCTAAAAGGTT+AGG | + | chr1.1:76061052-76061071 | MS.gene93411:intron | 45.0% | |
| CCCTGAACAATTCTGTACAG+CGG | - | chr1.1:76061643-76061662 | None:intergenic | 45.0% | |
| CCGCTGTACAGAATTGTTCA+GGG | + | chr1.1:76061640-76061659 | MS.gene93411:intron | 45.0% | |
| CGCTGTACAGAATTGTTCAG+GGG | + | chr1.1:76061641-76061660 | MS.gene93411:intron | 45.0% | |
| CTTCCTTTCACGTCACATAG+GGG | - | chr1.1:76063565-76063584 | None:intergenic | 45.0% | |
| GAGCAGACAAAGATGGAAGA+GGG | + | chr1.1:76062907-76062926 | MS.gene93411:CDS | 45.0% | |
| GATCAACAATAGCACAGGAC+AGG | + | chr1.1:76059649-76059668 | MS.gene93411:intron | 45.0% | |
| GCAACTCTCATATCACAAGC+TGG | + | chr1.1:76058166-76058185 | MS.gene93411:intron | 45.0% | |
| GCTTCCTTTCACGTCACATA+GGG | - | chr1.1:76063566-76063585 | None:intergenic | 45.0% | |
| GGACAGTGATATCATCCGAA+TGG | + | chr1.1:76057904-76057923 | MS.gene93411:intron | 45.0% | |
| GGGTTGAGTTTCCATTTGAG+TGG | + | chr1.1:76057715-76057734 | MS.gene93411:intron | 45.0% | |
| TCAAGCAGTGGGTCAAACAT+CGG | - | chr1.1:76060313-76060332 | None:intergenic | 45.0% | |
| TCTAGACCATGGACAAATGC+AGG | - | chr1.1:76061347-76061366 | None:intergenic | 45.0% | |
| TCTAGGGAAGCAACCTATAC+GGG | + | chr1.1:76060337-76060356 | MS.gene93411:CDS | 45.0% | |
| TCTGTGGTCAGGAAGAAGAA+AGG | + | chr1.1:76057543-76057562 | MS.gene93411:intron | 45.0% | |
| TCTGTTCCCATTGTGAAAGG+TGG | + | chr1.1:76062883-76062902 | MS.gene93411:CDS | 45.0% | |
| TGCAACGCAATTTCAGTGAG+AGG | - | chr1.1:76058360-76058379 | None:intergenic | 45.0% | |
| TGCTCTCCACCTTTCACAAT+GGG | - | chr1.1:76062892-76062911 | None:intergenic | 45.0% | |
| TGCTGCAATTCAAGAGGTCA+TGG | + | chr1.1:76061978-76061997 | MS.gene93411:CDS | 45.0% | |
| TGGCTTACCATTTAGGAAGC+TGG | + | chr1.1:76061928-76061947 | MS.gene93411:intron | 45.0% | |
| TGTTAAGTCATGGGGGTGAA+AGG | + | chr1.1:76061367-76061386 | MS.gene93411:intron | 45.0% | |
| TTCTTCTTCCTGACCACAGA+AGG | - | chr1.1:76057543-76057562 | None:intergenic | 45.0% | |
| TTGCAGCACCAACATCACAA+AGG | - | chr1.1:76061966-76061985 | None:intergenic | 45.0% | |
| TTTACTCCATATCCCTTGGC+AGG | + | chr1.1:76063412-76063431 | MS.gene93411:intron | 45.0% | |
| ! | AATTGGCCTCTACGAAGAGT+CGG | + | chr1.1:76059919-76059938 | MS.gene93411:intron | 45.0% |
| ! | AGTCTTATCTCCGGAATTGG+GGG | - | chr1.1:76060089-76060108 | None:intergenic | 45.0% |
| ! | CAGTCTTATCTCCGGAATTG+GGG | - | chr1.1:76060090-76060109 | None:intergenic | 45.0% |
| ! | CATTTTGTCCTTCTGTGGTC+AGG | + | chr1.1:76057532-76057551 | MS.gene93411:intron | 45.0% |
| ! | CCATCTGGAGATTTTCCAGA+AGG | + | chr1.1:76057615-76057634 | MS.gene93411:CDS | 45.0% |
| ! | CCTTCTGGAAAATCTCCAGA+TGG | - | chr1.1:76057618-76057637 | None:intergenic | 45.0% |
| ! | CTCTAGGGAAGCAACCTATA+CGG | + | chr1.1:76060336-76060355 | MS.gene93411:CDS | 45.0% |
| ! | TTCAGGGGTGCAACATTGAT+TGG | - | chr1.1:76062503-76062522 | None:intergenic | 45.0% |
| !! | AGAGGAAGTTGGTAGAACCT+AGG | + | chr1.1:76059743-76059762 | MS.gene93411:intron | 45.0% |
| !! | CATATCACAAGCTGGTTTGG+TGG | + | chr1.1:76058174-76058193 | MS.gene93411:intron | 45.0% |
| !! | CCTAACCTTTTAGGGACCAT+TGG | - | chr1.1:76061055-76061074 | None:intergenic | 45.0% |
| !! | GAAGTTGGTAGAACCTAGGT+TGG | + | chr1.1:76059747-76059766 | MS.gene93411:intron | 45.0% |
| !! | GATTTTGGCACCCACATAGA+TGG | + | chr1.1:76060139-76060158 | MS.gene93411:CDS | 45.0% |
| !! | GCTTTGGAACCATAAAGCCT+TGG | - | chr1.1:76058385-76058404 | None:intergenic | 45.0% |
| !! | TATCACAAGCTGGTTTGGTG+GGG | + | chr1.1:76058176-76058195 | MS.gene93411:intron | 45.0% |
| !! | TCTCCACTTTGGCCTTTTGT+AGG | + | chr1.1:76063169-76063188 | MS.gene93411:CDS | 45.0% |
| !! | TGGTTTGGTGGGGTTGAATT+AGG | + | chr1.1:76058186-76058205 | MS.gene93411:intron | 45.0% |
| !! | TGTTGGTGCTGCAATTCAAG+AGG | + | chr1.1:76061972-76061991 | MS.gene93411:CDS | 45.0% |
| !! | TTAGCTCTAGGCAATCTCAG+CGG | - | chr1.1:76063120-76063139 | None:intergenic | 45.0% |
| !!! | AATCCACCGACTTTTGAGAG+TGG | - | chr1.1:76060567-76060586 | None:intergenic | 45.0% |
| AAGTCGGACATCAGCATTCC+AGG | - | chr1.1:76059456-76059475 | None:intergenic | 50.0% | |
| ACAGCATGTTAAGGCAGAGG+AGG | - | chr1.1:76062470-76062489 | None:intergenic | 50.0% | |
| ACCCCTGAATCCTCACTCTA+GGG | + | chr1.1:76062514-76062533 | MS.gene93411:intron | 50.0% | |
| ACGTCACATAGGGGAGGATA+AGG | - | chr1.1:76063556-76063575 | None:intergenic | 50.0% | |
| AGAGGTCATGGAGTCCTATG+AGG | + | chr1.1:76061990-76062009 | MS.gene93411:CDS | 50.0% | |
| AGCAGCAGAAGTTCATCGTC+AGG | + | chr1.1:76058830-76058849 | MS.gene93411:CDS | 50.0% | |
| AGCCATGTCTAGAAACACGG+CGG | - | chr1.1:76058302-76058321 | None:intergenic | 50.0% | |
| AGGGTATGTACGAGAAGACC+TGG | + | chr1.1:76063053-76063072 | MS.gene93411:CDS | 50.0% | |
| AGGTGGAGAGCAGACAAAGA+TGG | + | chr1.1:76062900-76062919 | MS.gene93411:CDS | 50.0% | |
| AGTGCGTGCAACTGTTTCGA+AGG | + | chr1.1:76059883-76059902 | MS.gene93411:intron | 50.0% | |
| ATCAGAGGAGAAGAGAGAGC+TGG | + | chr1.1:76058770-76058789 | MS.gene93411:CDS | 50.0% | |
| CAAGCAGTGGGTCAAACATC+GGG | - | chr1.1:76060312-76060331 | None:intergenic | 50.0% | |
| CACGCACTTCGTGTTCTTCT+TGG | - | chr1.1:76059871-76059890 | None:intergenic | 50.0% | |
| CGTATAGGTTGCTTCCCTAG+AGG | - | chr1.1:76060338-76060357 | None:intergenic | 50.0% | |
| CTGATGTTTGTATGTGGGGG+GGG | + | chr1.1:76057860-76057879 | MS.gene93411:intron | 50.0% | |
| CTGCTCTCCACCTTTCACAA+TGG | - | chr1.1:76062893-76062912 | None:intergenic | 50.0% | |
| CTGGTACCTTTGACTCCTTG+AGG | + | chr1.1:76060855-76060874 | MS.gene93411:intron | 50.0% | |
| CTTCCACTCTCAAAAGTCGG+TGG | + | chr1.1:76060561-76060580 | MS.gene93411:intron | 50.0% | |
| CTTTGCATGTTGGTCGGAGT+AGG | - | chr1.1:76063615-76063634 | None:intergenic | 50.0% | |
| GAAAGATCCACACTACCCCT+CGG | - | chr1.1:76062190-76062209 | None:intergenic | 50.0% | |
| GAAGCAAGCCATGTTGGATG+TGG | + | chr1.1:76060997-76061016 | MS.gene93411:intron | 50.0% | |
| GAGGATAAGGCTGCATGCAA+GGG | - | chr1.1:76063543-76063562 | None:intergenic | 50.0% | |
| GAGTCACCTGCATTTGTCCA+TGG | + | chr1.1:76061338-76061357 | MS.gene93411:intron | 50.0% | |
| GATGTGCGCCTTTGTGATGT+TGG | + | chr1.1:76061955-76061974 | MS.gene93411:CDS | 50.0% | |
| GCAGACAAAGATGGAAGAGG+GGG | + | chr1.1:76062909-76062928 | MS.gene93411:CDS | 50.0% | |
| GCCGCTGTACAGAATTGTTC+AGG | + | chr1.1:76061639-76061658 | MS.gene93411:intron | 50.0% | |
| GGCCCAAACTCCAACCATAT+CGG | - | chr1.1:76061622-76061641 | None:intergenic | 50.0% | |
| GGCCGCTATCAAATTCATGC+TGG | + | chr1.1:76062856-76062875 | MS.gene93411:CDS | 50.0% | |
| GGGCGACTTCTGTGTACATT+TGG | + | chr1.1:76062534-76062553 | MS.gene93411:intron | 50.0% | |
| GGGGTAGTGTGGATCTTTCT+TGG | + | chr1.1:76062191-76062210 | MS.gene93411:intron | 50.0% | |
| GGTTGTTGAGAGCCCTACAT+TGG | + | chr1.1:76057883-76057902 | MS.gene93411:intron | 50.0% | |
| GTAGGCAAAAGCTCGATACG+AGG | + | chr1.1:76062600-76062619 | MS.gene93411:intron | 50.0% | |
| GTGACAGCATGTTAAGGCAG+AGG | - | chr1.1:76062473-76062492 | None:intergenic | 50.0% | |
| GTGTGATGCTGGCATTGTTC+AGG | + | chr1.1:76063245-76063264 | MS.gene93411:CDS | 50.0% | |
| TCATGTAGTGGCTGCATTCC+AGG | - | chr1.1:76063074-76063093 | None:intergenic | 50.0% | |
| TCGCCTACAAAAGGCCAAAG+TGG | - | chr1.1:76063175-76063194 | None:intergenic | 50.0% | |
| TGAAATTGCGTTGCACCCCA+AGG | + | chr1.1:76058365-76058384 | MS.gene93411:intron | 50.0% | |
| TGATGTTTGTATGTGGGGGG+GGG | + | chr1.1:76057861-76057880 | MS.gene93411:intron | 50.0% | |
| ! | TGGTGGATCTGTCTGCTCAA+CGG | - | chr1.1:76057571-76057590 | None:intergenic | 50.0% |
| ! | TTGCACCATTAACGGGTGAG+TGG | + | chr1.1:76058537-76058556 | MS.gene93411:intron | 50.0% |
| !! | AAACATCGGGTTGAACGCCA+CGG | - | chr1.1:76060299-76060318 | None:intergenic | 50.0% |
| !! | AATTCAGAGAGCACCCTGTG+GGG | - | chr1.1:76059548-76059567 | None:intergenic | 50.0% |
| !! | AGAAGTGTCACTCCCAACCT+AGG | - | chr1.1:76059763-76059782 | None:intergenic | 50.0% |
| !! | CAATTCAGAGAGCACCCTGT+GGG | - | chr1.1:76059549-76059568 | None:intergenic | 50.0% |
| !! | CCTCACGAAACTGGCTTGTA+CGG | - | chr1.1:76057956-76057975 | None:intergenic | 50.0% |
| !! | GAAACTGGCTTGTACGGTGA+GGG | - | chr1.1:76057950-76057969 | None:intergenic | 50.0% |
| AAGGAATGTGGCAGACTGCG+AGG | + | chr1.1:76060708-76060727 | MS.gene93411:intron | 55.0% | |
| ACAGAAGTCGCCCTAGAGTG+AGG | - | chr1.1:76062527-76062546 | None:intergenic | 55.0% | |
| ACCCACTGCTTGAAGCCTCT+AGG | + | chr1.1:76060320-76060339 | MS.gene93411:CDS | 55.0% | |
| AGACACACCACATCGACCGA+GGG | + | chr1.1:76062171-76062190 | MS.gene93411:intron | 55.0% | |
| CACCCCTGAATCCTCACTCT+AGG | + | chr1.1:76062513-76062532 | MS.gene93411:intron | 55.0% | |
| CCCACTGCTTGAAGCCTCTA+GGG | + | chr1.1:76060321-76060340 | MS.gene93411:CDS | 55.0% | |
| CCCTAGAGGCTTCAAGCAGT+GGG | - | chr1.1:76060324-76060343 | None:intergenic | 55.0% | |
| CCGTACAAGCCAGTTTCGTG+AGG | + | chr1.1:76057953-76057972 | MS.gene93411:intron | 55.0% | |
| CCTCCCCTATGTGACGTGAA+AGG | + | chr1.1:76063559-76063578 | MS.gene93411:CDS | 55.0% | |
| CCTTTCACGTCACATAGGGG+AGG | - | chr1.1:76063562-76063581 | None:intergenic | 55.0% | |
| CGCCCTAGAGTGAGGATTCA+GGG | - | chr1.1:76062519-76062538 | None:intergenic | 55.0% | |
| CGTTGCACCCCAAGGCTTTA+TGG | + | chr1.1:76058373-76058392 | MS.gene93411:intron | 55.0% | |
| GATGTTTGTATGTGGGGGGG+GGG | + | chr1.1:76057862-76057881 | MS.gene93411:intron | 55.0% | |
| GCCCTAGAGTGAGGATTCAG+GGG | - | chr1.1:76062518-76062537 | None:intergenic | 55.0% | |
| GCTGCAGAAGCAAGCCATGT+TGG | + | chr1.1:76060991-76061010 | MS.gene93411:intron | 55.0% | |
| GGAAAGCAATGCCTGCTTGC+AGG | - | chr1.1:76059527-76059546 | None:intergenic | 55.0% | |
| GGAGGATAAGGCTGCATGCA+AGG | - | chr1.1:76063544-76063563 | None:intergenic | 55.0% | |
| GGTGGATCTGTCTGCTCAAC+GGG | - | chr1.1:76057570-76057589 | None:intergenic | 55.0% | |
| TCCCTAGAGGCTTCAAGCAG+TGG | - | chr1.1:76060325-76060344 | None:intergenic | 55.0% | |
| TCGCCCTAGAGTGAGGATTC+AGG | - | chr1.1:76062520-76062539 | None:intergenic | 55.0% | |
| TCTCGAGGCCACATCCAACA+TGG | - | chr1.1:76061008-76061027 | None:intergenic | 55.0% | |
| TTTCCAGGGTTGCTGCTCAC+TGG | + | chr1.1:76060062-76060081 | MS.gene93411:intron | 55.0% | |
| ! | CAGGCATTGCTTTCCCCACA+GGG | + | chr1.1:76059532-76059551 | MS.gene93411:CDS | 55.0% |
| ! | CCACAGGGTGCTCTCTGAAT+TGG | + | chr1.1:76059547-76059566 | MS.gene93411:CDS | 55.0% |
| ! | TGGGGGTGAAAGGTGTGTTG+AGG | + | chr1.1:76061377-76061396 | MS.gene93411:intron | 55.0% |
| !! | CCAATTCAGAGAGCACCCTG+TGG | - | chr1.1:76059550-76059569 | None:intergenic | 55.0% |
| !! | CGAAACTGGCTTGTACGGTG+AGG | - | chr1.1:76057951-76057970 | None:intergenic | 55.0% |
| !! | TGCCGCCGTGTTTCTAGACA+TGG | + | chr1.1:76058297-76058316 | MS.gene93411:intron | 55.0% |
| ACACTACCCCTCGGTCGATG+TGG | - | chr1.1:76062181-76062200 | None:intergenic | 60.0% | |
| ACATCGACCGAGGGGTAGTG+TGG | + | chr1.1:76062180-76062199 | MS.gene93411:intron | 60.0% | |
| CAGACACACCACATCGACCG+AGG | + | chr1.1:76062170-76062189 | MS.gene93411:intron | 60.0% | |
| GACACACCACATCGACCGAG+GGG | + | chr1.1:76062172-76062191 | MS.gene93411:intron | 60.0% | |
| GCTCACTGGACCCCCAATTC+CGG | + | chr1.1:76060076-76060095 | MS.gene93411:CDS | 60.0% | |
| TCAGAGGATGGCCTGCAAGC+AGG | + | chr1.1:76059513-76059532 | MS.gene93411:CDS | 60.0% | |
| ! | GCAGGCATTGCTTTCCCCAC+AGG | + | chr1.1:76059531-76059550 | MS.gene93411:CDS | 60.0% |
| GGTCCAGTGAGCAGCAACCC+TGG | - | chr1.1:76060068-76060087 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 76057412 | 76063663 | 76057412 | ID=MS.gene93411 |
| chr1.1 | mRNA | 76057412 | 76063663 | 76057412 | ID=MS.gene93411.t1;Parent=MS.gene93411 |
| chr1.1 | exon | 76057412 | 76057470 | 76057412 | ID=MS.gene93411.t1.exon1;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76057412 | 76057470 | 76057412 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76057554 | 76057661 | 76057554 | ID=MS.gene93411.t1.exon2;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76057554 | 76057661 | 76057554 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76058752 | 76058851 | 76058752 | ID=MS.gene93411.t1.exon3;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76058752 | 76058851 | 76058752 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76059423 | 76059568 | 76059423 | ID=MS.gene93411.t1.exon4;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76059423 | 76059568 | 76059423 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76060069 | 76060160 | 76060069 | ID=MS.gene93411.t1.exon5;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76060069 | 76060160 | 76060069 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76060272 | 76060366 | 76060272 | ID=MS.gene93411.t1.exon6;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76060272 | 76060366 | 76060272 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76061943 | 76062039 | 76061943 | ID=MS.gene93411.t1.exon7;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76061943 | 76062039 | 76061943 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76062821 | 76062964 | 76062821 | ID=MS.gene93411.t1.exon8;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76062821 | 76062964 | 76062821 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76063049 | 76063266 | 76063049 | ID=MS.gene93411.t1.exon9;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76063049 | 76063266 | 76063049 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| chr1.1 | exon | 76063553 | 76063663 | 76063553 | ID=MS.gene93411.t1.exon10;Parent=MS.gene93411.t1 |
| chr1.1 | CDS | 76063553 | 76063663 | 76063553 | ID=cds.MS.gene93411.t1;Parent=MS.gene93411.t1 |
| Gene Sequence |
| Protein sequence |
