Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48507.t1 | XP_003603039.1 | 99.1 | 637 | 6 | 0 | 1 | 637 | 1 | 637 | 0.00E+00 | 1200.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48507.t1 | P40781 | 70.0 | 493 | 137 | 5 | 150 | 635 | 5 | 493 | 1.4e-206 | 720.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48507.t1 | G7J6D3 | 99.1 | 637 | 6 | 0 | 1 | 637 | 1 | 637 | 0.0e+00 | 1200.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene48507 | 0.810526 | 1.10E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene48507 | 0.835047 | 2.11E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene48507 | 0.8779 | 4.34E-69 | -1.69E-46 |
| MS.gene05124 | MS.gene48507 | 0.813073 | 3.08E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene48507 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene052143 | MS.gene48507 | 0.811836 | 5.74E-51 | -1.69E-46 |
| MS.gene052367 | MS.gene48507 | 0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene053416 | MS.gene48507 | 0.844874 | 5.77E-59 | -1.69E-46 |
| MS.gene053417 | MS.gene48507 | 0.843342 | 1.49E-58 | -1.69E-46 |
| MS.gene054643 | MS.gene48507 | 0.887368 | 1.52E-72 | -1.69E-46 |
| MS.gene056041 | MS.gene48507 | 0.804211 | 2.41E-49 | -1.69E-46 |
| MS.gene058818 | MS.gene48507 | 0.842253 | 2.90E-58 | -1.69E-46 |
| MS.gene059300 | MS.gene48507 | 0.807717 | 4.41E-50 | -1.69E-46 |
| MS.gene06057 | MS.gene48507 | 0.83541 | 1.71E-56 | -1.69E-46 |
| MS.gene061260 | MS.gene48507 | 0.810471 | 1.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48507.t1 | MTR_3g101680 | 99.215 | 637 | 5 | 0 | 1 | 637 | 1 | 637 | 0.0 | 1310 |
| MS.gene48507.t1 | MTR_4g086240 | 63.859 | 653 | 192 | 10 | 1 | 637 | 1 | 625 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48507.t1 | AT4G33400 | 68.709 | 604 | 170 | 7 | 40 | 637 | 55 | 645 | 0.0 | 855 |
| MS.gene48507.t1 | AT3G19240 | 64.154 | 597 | 194 | 7 | 49 | 637 | 63 | 647 | 0.0 | 785 |
Find 143 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTCTTGGTTGGTGAAAA+TGG | 0.154249 | 3.1:-80739489 | MS.gene48507:CDS |
| TTCTGTTGTTGTTGGTTCTT+TGG | 0.218070 | 3.1:-80738971 | MS.gene48507:CDS |
| TTCTTGGATTGGATGATAAT+AGG | 0.234318 | 3.1:-80739146 | MS.gene48507:CDS |
| TGCTCTGGATAACAGTTTCT+TGG | 0.277028 | 3.1:-80739502 | MS.gene48507:CDS |
| CCTCTTGATTCGCATCTTGC+TGG | 0.308976 | 3.1:-80738706 | MS.gene48507:CDS |
| CTGAATGAGCTAACTTTCAT+TGG | 0.327512 | 3.1:+80737190 | None:intergenic |
| GGTTGGTGAAAATGGGATTC+AGG | 0.330136 | 3.1:-80739481 | MS.gene48507:CDS |
| CAGGCGAAAACTGCCTTTCC+TGG | 0.334592 | 3.1:-80738910 | MS.gene48507:CDS |
| TGATTGTTACCGCAGCCAAC+AGG | 0.342727 | 3.1:-80737335 | MS.gene48507:CDS |
| TTGAGCACCTTTACTATCAT+TGG | 0.356584 | 3.1:+80739191 | None:intergenic |
| GAAAATAAACTTCATTCAAC+AGG | 0.360836 | 3.1:-80739303 | MS.gene48507:CDS |
| GAGCTTGGCGCTTGGTGCTC+TGG | 0.367754 | 3.1:-80739517 | MS.gene48507:CDS |
| TTGGGCGATGAAATTCTTTA+CGG | 0.368085 | 3.1:-80739799 | MS.gene48507:CDS |
| TGGATGATAATAGGCTTTGT+AGG | 0.375035 | 3.1:-80739137 | MS.gene48507:CDS |
| AAAACTGCCTTTCCTGGACT+TGG | 0.375250 | 3.1:-80738904 | MS.gene48507:CDS |
| GGTGATGGTTCTGTTGTTGT+TGG | 0.380337 | 3.1:-80738979 | MS.gene48507:CDS |
| TGATAGTAAAGGTGCTCAAT+TGG | 0.384390 | 3.1:-80739187 | MS.gene48507:CDS |
| TGAGTACACCTGTGTTGAAT+TGG | 0.391184 | 3.1:-80739056 | MS.gene48507:CDS |
| GGGAACCACGGATACTTACT+TGG | 0.391954 | 3.1:-80738833 | MS.gene48507:CDS |
| AAGCTTAAGAGCTTTGAGTT+TGG | 0.397722 | 3.1:+80740124 | None:intergenic |
| GAGAACAAGCTTAAGGTTTA+CGG | 0.398965 | 3.1:-80739699 | MS.gene48507:CDS |
| AGATAAAGCTTAACGGCGTT+AGG | 0.399449 | 3.1:+80740077 | None:intergenic |
| TGGGAAAGTTCAGCGTGATA+TGG | 0.402288 | 3.1:-80737387 | MS.gene48507:CDS |
| GTTACATCCACATTAGTAAC+AGG | 0.405493 | 3.1:+80738877 | None:intergenic |
| CACGCCAGTGAGAGCGAGTC+AGG | 0.407606 | 3.1:-80739583 | MS.gene48507:CDS |
| TTTCAGTGCTTTGCTACAAC+TGG | 0.410386 | 3.1:-80739000 | MS.gene48507:CDS |
| GTTTCTTGGTTGGTGAAAAT+GGG | 0.412974 | 3.1:-80739488 | MS.gene48507:CDS |
| TACTGATGAGAACAAGCTTA+AGG | 0.413775 | 3.1:-80739706 | MS.gene48507:CDS |
| TGAATGAGCTAACTTTCATT+GGG | 0.415339 | 3.1:+80737191 | None:intergenic |
| TGAGAGCGAGTCAGGATTTG+AGG | 0.418327 | 3.1:-80739575 | MS.gene48507:CDS |
| CAACACAGGTGTACTCATAT+TGG | 0.424208 | 3.1:+80739062 | None:intergenic |
| TGACCGTCATGGAATAGTTC+AGG | 0.425189 | 3.1:-80739103 | MS.gene48507:CDS |
| GGATTTGAGGGAGGAATTTG+AGG | 0.425963 | 3.1:-80739562 | MS.gene48507:CDS |
| CACAGGGTCATCAGTTCTCT+AGG | 0.426612 | 3.1:-80739032 | MS.gene48507:CDS |
| CAACTGGGATTCATGGAAAA+GGG | 0.427004 | 3.1:-80739443 | MS.gene48507:CDS |
| GATGAAATTCTTTACGGAAC+AGG | 0.428437 | 3.1:-80739793 | MS.gene48507:CDS |
| TGATTCTCCTGAGGCTCCAT+TGG | 0.428766 | 3.1:-80737224 | MS.gene48507:CDS |
| CACCAGTTTGATATTGAGAC+AGG | 0.433409 | 3.1:-80739276 | MS.gene48507:CDS |
| GTTGTGACTGAATGGAGATT+TGG | 0.434748 | 3.1:-80739249 | MS.gene48507:CDS |
| GCAACTGGGATTCATGGAAA+AGG | 0.436550 | 3.1:-80739444 | MS.gene48507:CDS |
| GTTGTTGTTGGTTCTTTGGA+TGG | 0.439449 | 3.1:-80738967 | MS.gene48507:CDS |
| GGTGACAGAGAACGGGAAAC+AGG | 0.442816 | 3.1:-80737431 | MS.gene48507:CDS |
| GCTCATTCAGCATGTCCAAC+AGG | 0.443222 | 3.1:-80737177 | MS.gene48507:CDS |
| CTCACTGGCGTGGCCGAACC+AGG | 0.448366 | 3.1:+80739594 | None:intergenic |
| GTTCTTTGGATGGAAAGATT+CGG | 0.455797 | 3.1:-80738957 | MS.gene48507:CDS |
| CAAACTTGTCGTGCATAAAC+CGG | 0.459612 | 3.1:+80737254 | None:intergenic |
| GTCGTCAACGTCGAAGTTGG+TGG | 0.460565 | 3.1:-80739394 | MS.gene48507:CDS |
| TCCCTGTCTCAATATCAAAC+TGG | 0.467026 | 3.1:+80739274 | None:intergenic |
| ACTGCTACAAGATAGTTCTC+AGG | 0.467624 | 3.1:-80737297 | MS.gene48507:CDS |
| GGTCTCAGCTTTCATGAGAA+GGG | 0.470060 | 3.1:+80739353 | None:intergenic |
| CAAGCTTAAGGTTTACGGTA+AGG | 0.479331 | 3.1:-80739694 | MS.gene48507:CDS |
| GATAAAGCTTAACGGCGTTA+GGG | 0.483757 | 3.1:+80740078 | None:intergenic |
| TTTGATGGAAAGTGGATTGT+GGG | 0.483918 | 3.1:-80738853 | MS.gene48507:CDS |
| CTGGATAACAGTTTCTTGGT+TGG | 0.484278 | 3.1:-80739498 | MS.gene48507:CDS |
| CAGGGAAGGTTGTGACTGAA+TGG | 0.489250 | 3.1:-80739257 | MS.gene48507:CDS |
| ATCGACTCATCAGCAACTTC+CGG | 0.493994 | 3.1:+80739651 | None:intergenic |
| ATGACTCCATTGTTGAAAGC+CGG | 0.499669 | 3.1:-80737273 | MS.gene48507:CDS |
| AGGTGCTCAATTGGATCCAT+CGG | 0.499935 | 3.1:-80739178 | MS.gene48507:CDS |
| GGGATTCAGAGCTTGGCGCT+TGG | 0.500399 | 3.1:-80739525 | MS.gene48507:CDS |
| GAAACAGGAGCGACATATAG+TGG | 0.501405 | 3.1:-80737416 | MS.gene48507:CDS |
| TTTGTTAAAACTCGTTGTGT+TGG | 0.501731 | 3.1:-80739990 | MS.gene48507:CDS |
| ACCTGTGTTGAATTGGGCAC+AGG | 0.504500 | 3.1:-80739049 | MS.gene48507:CDS |
| AACTTTCAACAGGTCAAAGA+TGG | 0.509696 | 3.1:-80737364 | MS.gene48507:CDS |
| TTCTATCAACTCTATGAGGC+AGG | 0.509976 | 3.1:-80738929 | MS.gene48507:CDS |
| TAACTCAGGTGACAGAGAAC+GGG | 0.510547 | 3.1:-80737438 | MS.gene48507:intron |
| CGTGATATGGAACTTTCAAC+AGG | 0.512894 | 3.1:-80737374 | MS.gene48507:CDS |
| AAATCCTGACTCGCTCTCAC+TGG | 0.513396 | 3.1:+80739579 | None:intergenic |
| GTTAAAACTCGTTGTGTTGG+TGG | 0.515711 | 3.1:-80739987 | MS.gene48507:CDS |
| CTTCTCAAAGAGTCCTGGTT+CGG | 0.515826 | 3.1:-80739607 | MS.gene48507:CDS |
| GATGTGAAGATAAAGCTTAA+CGG | 0.516648 | 3.1:+80740070 | None:intergenic |
| GCTATAACCAATGGAGCCTC+AGG | 0.517226 | 3.1:+80737217 | None:intergenic |
| AAATGGTGGGATTCAGAGCT+TGG | 0.518256 | 3.1:-80739532 | MS.gene48507:CDS |
| AGCAGCTCTTTAGACCCTGT+TGG | 0.519333 | 3.1:+80737320 | None:intergenic |
| TGGTCTCAGCTTTCATGAGA+AGG | 0.524260 | 3.1:+80739352 | None:intergenic |
| GGGTTGAGCTTGAGCAACCT+TGG | 0.528839 | 3.1:+80738727 | None:intergenic |
| TCTTTAGACCCTGTTGGCTG+CGG | 0.528936 | 3.1:+80737326 | None:intergenic |
| GAGTACACCTGTGTTGAATT+GGG | 0.529176 | 3.1:-80739055 | MS.gene48507:CDS |
| GATATCACCAATGATAGTAA+AGG | 0.529897 | 3.1:-80739198 | MS.gene48507:CDS |
| GTAACAGGTGAACCAAGTCC+AGG | 0.531965 | 3.1:+80738892 | None:intergenic |
| CCCATCTTTATCGGTAAACA+CGG | 0.532444 | 3.1:+80738798 | None:intergenic |
| TGATAATAGGCTTTGTAGGT+GGG | 0.532793 | 3.1:-80739133 | MS.gene48507:CDS |
| TGCTTTGCTACAACTGGTGA+TGG | 0.537885 | 3.1:-80738994 | MS.gene48507:CDS |
| ATGATAATAGGCTTTGTAGG+TGG | 0.540329 | 3.1:-80739134 | MS.gene48507:CDS |
| CCACACGACGCTGATGCGCT+AGG | 0.540781 | 3.1:+80739841 | None:intergenic |
| TTCGTCGTCAACGTCGAAGT+TGG | 0.543148 | 3.1:-80739397 | MS.gene48507:CDS |
| GGTGCTCAATTGGATCCATC+GGG | 0.552449 | 3.1:-80739177 | MS.gene48507:CDS |
| CATAAACCGGCTTTCAACAA+TGG | 0.552999 | 3.1:+80737267 | None:intergenic |
| TGCAGTCACTGATTCTCCTG+AGG | 0.556545 | 3.1:-80737233 | MS.gene48507:CDS |
| GAGAGCGAGTCAGGATTTGA+GGG | 0.557131 | 3.1:-80739574 | MS.gene48507:CDS |
| GAATTTGAGGAAGCTGCAAA+TGG | 0.557267 | 3.1:-80739549 | MS.gene48507:CDS |
| GTAACTCAGGTGACAGAGAA+CGG | 0.558922 | 3.1:-80737439 | MS.gene48507:intron |
| TGGGATATGCGTGACCGTCA+TGG | 0.562375 | 3.1:-80739114 | MS.gene48507:CDS |
| AAGCTTTATCTTCACATCGG+TGG | 0.566382 | 3.1:-80740065 | MS.gene48507:CDS |
| ACAGGGTCATCAGTTCTCTA+GGG | 0.567805 | 3.1:-80739031 | MS.gene48507:CDS |
| CCGTGTTTACCGATAAAGAT+GGG | 0.570042 | 3.1:-80738798 | MS.gene48507:CDS |
| GATAGCTTCTCAAAGAGTCC+TGG | 0.573812 | 3.1:-80739612 | MS.gene48507:CDS |
| TGGACTCATCAAAAGCATGC+TGG | 0.574141 | 3.1:+80739332 | None:intergenic |
| TTGAGGAAGCTGCAAATGGT+GGG | 0.574795 | 3.1:-80739545 | MS.gene48507:CDS |
| AAAATTAGGTCAAAAGTTGG+TGG | 0.576478 | 3.1:-80739882 | MS.gene48507:CDS |
| TGTATTCTATCAACTCTATG+AGG | 0.576757 | 3.1:-80738933 | MS.gene48507:CDS |
| TGGTGATGATGATGCTGATG+AGG | 0.577578 | 3.1:-80739931 | MS.gene48507:CDS |
| CACACGACGCTGATGCGCTA+GGG | 0.578608 | 3.1:+80739842 | None:intergenic |
| ATTGGGGTAGCTATAACCAA+TGG | 0.579247 | 3.1:+80737208 | None:intergenic |
| TTTGAGGAAGCTGCAAATGG+TGG | 0.581584 | 3.1:-80739546 | MS.gene48507:CDS |
| CACGAATTATCATCGCCTGT+TGG | 0.582299 | 3.1:+80737162 | None:intergenic |
| GAATGGAGATTTGGTAAGGA+TGG | 0.582473 | 3.1:-80739240 | MS.gene48507:CDS |
| CCTGTGTTGAATTGGGCACA+GGG | 0.583531 | 3.1:-80739048 | MS.gene48507:CDS |
| GACTGAATGGAGATTTGGTA+AGG | 0.586216 | 3.1:-80739244 | MS.gene48507:CDS |
| AGGTGAACCAAGTCCAGGAA+AGG | 0.590450 | 3.1:+80738897 | None:intergenic |
| GAAATAATATTGCTGCTCCA+AGG | 0.591970 | 3.1:-80738744 | MS.gene48507:CDS |
| TGGTTCACCTGTTACTAATG+TGG | 0.593720 | 3.1:-80738884 | MS.gene48507:CDS |
| CCAAGAAAAGTTGAACCCGA+TGG | 0.594621 | 3.1:+80739162 | None:intergenic |
| CTGCTACAAGATAGTTCTCA+GGG | 0.595736 | 3.1:-80737296 | MS.gene48507:CDS |
| AACTGGGATTCATGGAAAAG+GGG | 0.604100 | 3.1:-80739442 | MS.gene48507:CDS |
| GGTGATGATGATGCTGATGA+GGG | 0.605562 | 3.1:-80739930 | MS.gene48507:CDS |
| ACCGTGTTTACCGATAAAGA+TGG | 0.608326 | 3.1:-80738799 | MS.gene48507:CDS |
| GCGACATATAGTGGCTACTG+TGG | 0.614582 | 3.1:-80737407 | MS.gene48507:CDS |
| GATTGTTACCGCAGCCAACA+GGG | 0.615563 | 3.1:-80737334 | MS.gene48507:CDS |
| CTGACTCGCTCTCACTGGCG+TGG | 0.617306 | 3.1:+80739584 | None:intergenic |
| GTTTGATATTGAGACAGGGA+AGG | 0.620382 | 3.1:-80739271 | MS.gene48507:CDS |
| GTTAAGCTTTATCTTCACAT+CGG | 0.621435 | 3.1:-80740068 | MS.gene48507:CDS |
| AACAACCAAGTAAGTATCCG+TGG | 0.622146 | 3.1:+80738828 | None:intergenic |
| ACTCTTTGAGAAGCTATCAT+CGG | 0.623036 | 3.1:+80739617 | None:intergenic |
| TCAACTTCATCTACAGATGA+CGG | 0.624942 | 3.1:+80740149 | None:intergenic |
| CCAGCAAGATGCGAATCAAG+AGG | 0.625035 | 3.1:+80738706 | None:intergenic |
| GGTGGCGCTCACAGCCGCGA+CGG | 0.625976 | 3.1:-80740275 | MS.gene48507:CDS |
| CCCTGTGCCCAATTCAACAC+AGG | 0.635628 | 3.1:+80739048 | None:intergenic |
| CAGCAAGATGCGAATCAAGA+GGG | 0.636555 | 3.1:+80738707 | None:intergenic |
| GACGAAGTTGAAGAAGAAGA+TGG | 0.637984 | 3.1:-80739951 | MS.gene48507:CDS |
| CGACATATAGTGGCTACTGT+GGG | 0.641076 | 3.1:-80737406 | MS.gene48507:CDS |
| AGCGAGTCAGGATTTGAGGG+AGG | 0.649465 | 3.1:-80739571 | MS.gene48507:CDS |
| ACCAGTTTGATATTGAGACA+GGG | 0.654795 | 3.1:-80739275 | MS.gene48507:CDS |
| CCTAGCGCATCAGCGTCGTG+TGG | 0.655097 | 3.1:-80739841 | MS.gene48507:CDS |
| AAAGTGGATTGTGGGAACCA+CGG | 0.666086 | 3.1:-80738845 | MS.gene48507:CDS |
| AACTACGAAGATGCAAACGA+AGG | 0.673113 | 3.1:-80740200 | MS.gene48507:CDS |
| AAAATAAACTTCATTCAACA+GGG | 0.674447 | 3.1:-80739302 | MS.gene48507:CDS |
| AGTTGCTGATGAGTCGATGT+GGG | 0.683396 | 3.1:-80739646 | MS.gene48507:CDS |
| GATCCTGAACTATTCCATGA+CGG | 0.683919 | 3.1:+80739100 | None:intergenic |
| AACTTTCGAGTAAACCGTCG+CGG | 0.697236 | 3.1:+80740261 | None:intergenic |
| GAATGAGCTAACTTTCATTG+GGG | 0.698456 | 3.1:+80737192 | None:intergenic |
| AAGTTGCTGATGAGTCGATG+TGG | 0.703498 | 3.1:-80739647 | MS.gene48507:CDS |
| CAGGGTCATCAGTTCTCTAG+GGG | 0.709385 | 3.1:-80739030 | MS.gene48507:CDS |
| AGGGTCATCAGTTCTCTAGG+GGG | 0.723930 | 3.1:-80739029 | MS.gene48507:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGAGGTAAAATTATT+AGG | + | chr3.1:80739208-80739227 | None:intergenic | 15.0% |
| !!! | ACATTTACTATTGATAATAT+TGG | - | chr3.1:80739131-80739150 | MS.gene48507:CDS | 15.0% |
| !!! | CATTTACTATTGATAATATT+GGG | - | chr3.1:80739132-80739151 | MS.gene48507:CDS | 15.0% |
| !!! | TTATAATGAATTTAACTTCT+TGG | - | chr3.1:80739988-80740007 | MS.gene48507:CDS | 15.0% |
| !!! | TTTTTCAAAAAAAAAGCATA+TGG | + | chr3.1:80739731-80739750 | None:intergenic | 15.0% |
| !! | AAAATAAACTTCATTCAACA+GGG | - | chr3.1:80738147-80738166 | MS.gene48507:intron | 20.0% |
| !! | AAATTATTAGGTGAAAACAT+AGG | + | chr3.1:80739196-80739215 | None:intergenic | 20.0% |
| !! | AAGATACTTTCTTTAGATAA+TGG | + | chr3.1:80738935-80738954 | None:intergenic | 20.0% |
| !! | AGATACTTTCTTTAGATAAT+GGG | + | chr3.1:80738934-80738953 | None:intergenic | 20.0% |
| !!! | AAAACAGAGATTTTATAGTT+TGG | - | chr3.1:80739856-80739875 | MS.gene48507:CDS | 20.0% |
| !!! | TGAAAATTGGTTCAAAAATT+AGG | - | chr3.1:80737553-80737572 | MS.gene48507:intron | 20.0% |
| !!! | TTTGAAATTATGTTCTGTAT+TGG | - | chr3.1:80739345-80739364 | MS.gene48507:CDS | 20.0% |
| ! | AAAGATGGGAAAACTAAAAA+TGG | - | chr3.1:80738665-80738684 | MS.gene48507:intron | 25.0% |
| ! | AAGAACAATACAGAAAGTTA+TGG | + | chr3.1:80739232-80739251 | None:intergenic | 25.0% |
| ! | AATACAGTTTAGTCATCTTA+AGG | - | chr3.1:80739632-80739651 | MS.gene48507:CDS | 25.0% |
| ! | AGAAAGTTATGGAAAATAAG+AGG | + | chr3.1:80739221-80739240 | None:intergenic | 25.0% |
| ! | CTATAAAACCGATAAGATTA+CGG | + | chr3.1:80739812-80739831 | None:intergenic | 25.0% |
| ! | GAAAATAAACTTCATTCAAC+AGG | - | chr3.1:80738146-80738165 | MS.gene48507:intron | 25.0% |
| ! | GTCTTGTAAATTAAGAATGA+TGG | - | chr3.1:80738850-80738869 | MS.gene48507:CDS | 25.0% |
| ! | TCAAAAATTAGGTCAAAAGT+TGG | - | chr3.1:80737564-80737583 | MS.gene48507:intron | 25.0% |
| !! | AGATGACTAAACTGTATTTT+AGG | + | chr3.1:80739630-80739649 | None:intergenic | 25.0% |
| !! | ATTTTCTTCGTATTCTTCAT+CGG | + | chr3.1:80737214-80737233 | None:intergenic | 25.0% |
| !! | CTATTGACATCTTATTTGAA+TGG | - | chr3.1:80739690-80739709 | MS.gene48507:CDS | 25.0% |
| !! | TAATTTCATTTTGCGAATTG+AGG | - | chr3.1:80739251-80739270 | MS.gene48507:CDS | 25.0% |
| !! | TATGATGTAACATGTGTTTT+CGG | - | chr3.1:80738954-80738973 | MS.gene48507:CDS | 25.0% |
| !!! | AAAACTAAAAATGGTTTTGC+TGG | - | chr3.1:80738674-80738693 | MS.gene48507:CDS | 25.0% |
| !!! | AACTGTATTTTAGGAAAAGA+AGG | + | chr3.1:80739621-80739640 | None:intergenic | 25.0% |
| !!! | ACTGTATTTTAGGAAAAGAA+GGG | + | chr3.1:80739620-80739639 | None:intergenic | 25.0% |
| !!! | TAATCTTATCGGTTTTATAG+TGG | - | chr3.1:80739812-80739831 | MS.gene48507:CDS | 25.0% |
| !!! | TTTAGTTTTCCCATCTTTAT+CGG | + | chr3.1:80738663-80738682 | None:intergenic | 25.0% |
| AAAATTAGGTCAAAAGTTGG+TGG | - | chr3.1:80737567-80737586 | MS.gene48507:intron | 30.0% | |
| AAGAAAAACAAAAGAGAAGC+AGG | + | chr3.1:80739501-80739520 | None:intergenic | 30.0% | |
| ATAATGCAATGCTATTGATG+TGG | + | chr3.1:80739105-80739124 | None:intergenic | 30.0% | |
| CTGACAACTGTGTAATATTA+CGG | + | chr3.1:80739030-80739049 | None:intergenic | 30.0% | |
| CTTAATTTACAAGACAACAG+TGG | + | chr3.1:80738845-80738864 | None:intergenic | 30.0% | |
| GATATCACCAATGATAGTAA+AGG | - | chr3.1:80738251-80738270 | MS.gene48507:intron | 30.0% | |
| GATGTGAAGATAAAGCTTAA+CGG | + | chr3.1:80737382-80737401 | None:intergenic | 30.0% | |
| TAGTGAGTGAAGAAATTGAT+GGG | + | chr3.1:80739474-80739493 | None:intergenic | 30.0% | |
| TCAATGCATGATAGCATATT+TGG | + | chr3.1:80739298-80739317 | None:intergenic | 30.0% | |
| TGAATGAGCTAACTTTCATT+GGG | + | chr3.1:80740261-80740280 | None:intergenic | 30.0% | |
| TGTATTCTATCAACTCTATG+AGG | - | chr3.1:80738516-80738535 | MS.gene48507:intron | 30.0% | |
| TTAGTGAGTGAAGAAATTGA+TGG | + | chr3.1:80739475-80739494 | None:intergenic | 30.0% | |
| TTCAAACATCATGCAATTTC+TGG | + | chr3.1:80739331-80739350 | None:intergenic | 30.0% | |
| TTTGTTAAAACTCGTTGTGT+TGG | - | chr3.1:80737459-80737478 | MS.gene48507:intron | 30.0% | |
| ! | AATGTGGATGTAACTTTTGA+TGG | - | chr3.1:80738581-80738600 | MS.gene48507:intron | 30.0% |
| ! | ATGATGTAACATGTGTTTTC+GGG | - | chr3.1:80738955-80738974 | MS.gene48507:CDS | 30.0% |
| ! | ATGTAACTTTTGATGGAAAG+TGG | - | chr3.1:80738588-80738607 | MS.gene48507:intron | 30.0% |
| ! | ATTTAACTTCTTGGTAACTC+AGG | - | chr3.1:80739997-80740016 | MS.gene48507:CDS | 30.0% |
| ! | GTTAAGCTTTATCTTCACAT+CGG | - | chr3.1:80737381-80737400 | MS.gene48507:CDS | 30.0% |
| ! | TTCTTGGATTGGATGATAAT+AGG | - | chr3.1:80738303-80738322 | MS.gene48507:intron | 30.0% |
| ! | TTGTGAAGAATTTTGCAACT+GGG | - | chr3.1:80737991-80738010 | MS.gene48507:intron | 30.0% |
| ! | TTTACGGTAAGGATTTTCTT+GGG | - | chr3.1:80737766-80737785 | MS.gene48507:intron | 30.0% |
| !! | CTGTATTTTAGGAAAAGAAG+GGG | + | chr3.1:80739619-80739638 | None:intergenic | 30.0% |
| !! | TGAAGTTTATTTTCACCCAA+TGG | + | chr3.1:80738140-80738159 | None:intergenic | 30.0% |
| !! | TGTATTTTAGGAAAAGAAGG+GGG | + | chr3.1:80739618-80739637 | None:intergenic | 30.0% |
| !!! | GGTTTTTGGGTTTTGAAAAT+TGG | - | chr3.1:80737540-80737559 | MS.gene48507:intron | 30.0% |
| AAACCGATAAGATTACGGAT+TGG | + | chr3.1:80739807-80739826 | None:intergenic | 35.0% | |
| AACAGACACAATCAAATTGC+AGG | + | chr3.1:80739901-80739920 | None:intergenic | 35.0% | |
| AACTTTCAACAGGTCAAAGA+TGG | - | chr3.1:80740085-80740104 | MS.gene48507:CDS | 35.0% | |
| ACCAGTTTGATATTGAGACA+GGG | - | chr3.1:80738174-80738193 | MS.gene48507:intron | 35.0% | |
| AGTCCAATCCGTAATCTTAT+CGG | - | chr3.1:80739801-80739820 | MS.gene48507:CDS | 35.0% | |
| AGTGAGTGAAGAAATTGATG+GGG | + | chr3.1:80739473-80739492 | None:intergenic | 35.0% | |
| ATAGAAATATCCCAGAGTCT+TGG | - | chr3.1:80739433-80739452 | MS.gene48507:CDS | 35.0% | |
| CAATGCATGTGTTAGGTTTA+GGG | + | chr3.1:80739662-80739681 | None:intergenic | 35.0% | |
| CTGAATGAGCTAACTTTCAT+TGG | + | chr3.1:80740262-80740281 | None:intergenic | 35.0% | |
| GAAAGTTCAATGCATGTGTT+AGG | + | chr3.1:80739669-80739688 | None:intergenic | 35.0% | |
| GAAATAATATTGCTGCTCCA+AGG | - | chr3.1:80738705-80738724 | MS.gene48507:CDS | 35.0% | |
| GAATGAGCTAACTTTCATTG+GGG | + | chr3.1:80740260-80740279 | None:intergenic | 35.0% | |
| GAGAACAAGCTTAAGGTTTA+CGG | - | chr3.1:80737750-80737769 | MS.gene48507:intron | 35.0% | |
| GATGAAATTCTTTACGGAAC+AGG | - | chr3.1:80737656-80737675 | MS.gene48507:intron | 35.0% | |
| GGTGTAAAATAAGGTTGGAA+GGG | + | chr3.1:80739581-80739600 | None:intergenic | 35.0% | |
| GTTACATCCACATTAGTAAC+AGG | + | chr3.1:80738575-80738594 | None:intergenic | 35.0% | |
| GTTCTTTGGATGGAAAGATT+CGG | - | chr3.1:80738492-80738511 | MS.gene48507:intron | 35.0% | |
| TACTGATGAGAACAAGCTTA+AGG | - | chr3.1:80737743-80737762 | MS.gene48507:intron | 35.0% | |
| TCAACTTCATCTACAGATGA+CGG | + | chr3.1:80737303-80737322 | None:intergenic | 35.0% | |
| TCAATGCATGTGTTAGGTTT+AGG | + | chr3.1:80739663-80739682 | None:intergenic | 35.0% | |
| TGATAGCATATTTGGCTAAC+AGG | + | chr3.1:80739290-80739309 | None:intergenic | 35.0% | |
| TTGAGCACCTTTACTATCAT+TGG | + | chr3.1:80738261-80738280 | None:intergenic | 35.0% | |
| TTGCATCTTCTGTATTCTTG+TGG | - | chr3.1:80739956-80739975 | MS.gene48507:CDS | 35.0% | |
| TTGGGCGATGAAATTCTTTA+CGG | - | chr3.1:80737650-80737669 | MS.gene48507:intron | 35.0% | |
| ! | AAAGGGGCTTTTGTTAACTT+TGG | - | chr3.1:80738023-80738042 | MS.gene48507:intron | 35.0% |
| ! | AAATTACCCATTTTGCGTTG+GGG | + | chr3.1:80737416-80737435 | None:intergenic | 35.0% |
| ! | AATTTTGCAACTGGGATTCA+TGG | - | chr3.1:80737999-80738018 | MS.gene48507:intron | 35.0% |
| ! | ACTCTTTGAGAAGCTATCAT+CGG | + | chr3.1:80737835-80737854 | None:intergenic | 35.0% |
| ! | AGAAATTACCCATTTTGCGT+TGG | + | chr3.1:80737418-80737437 | None:intergenic | 35.0% |
| ! | ATGATAATAGGCTTTGTAGG+TGG | - | chr3.1:80738315-80738334 | MS.gene48507:intron | 35.0% |
| ! | ATGCTTTTGATGAGTCCATT+GGG | - | chr3.1:80738122-80738141 | MS.gene48507:intron | 35.0% |
| ! | GAAATTACCCATTTTGCGTT+GGG | + | chr3.1:80737417-80737436 | None:intergenic | 35.0% |
| ! | GTTGTGAAGAATTTTGCAAC+TGG | - | chr3.1:80737990-80738009 | MS.gene48507:intron | 35.0% |
| ! | GTTTACGGTAAGGATTTTCT+TGG | - | chr3.1:80737765-80737784 | MS.gene48507:intron | 35.0% |
| ! | TAGAGTAGGGGTGTAAAATA+AGG | + | chr3.1:80739590-80739609 | None:intergenic | 35.0% |
| ! | TGATAATAGGCTTTGTAGGT+GGG | - | chr3.1:80738316-80738335 | MS.gene48507:intron | 35.0% |
| ! | TGGATGATAATAGGCTTTGT+AGG | - | chr3.1:80738312-80738331 | MS.gene48507:intron | 35.0% |
| ! | TTCATGAGAAGGGTTTTCTT+AGG | + | chr3.1:80738089-80738108 | None:intergenic | 35.0% |
| !! | AAATGGTTTTGCTGGTAGAA+TGG | - | chr3.1:80738682-80738701 | MS.gene48507:CDS | 35.0% |
| !! | AACACATTTTTCAGCAGATG+TGG | + | chr3.1:80739930-80739949 | None:intergenic | 35.0% |
| !! | AAGCTTAAGAGCTTTGAGTT+TGG | + | chr3.1:80737328-80737347 | None:intergenic | 35.0% |
| !! | AATGGTTTTGCTGGTAGAAT+GGG | - | chr3.1:80738683-80738702 | MS.gene48507:CDS | 35.0% |
| !! | ACATCATGCAATTTCTGGTA+CGG | + | chr3.1:80739326-80739345 | None:intergenic | 35.0% |
| !! | AGTTTCTTGGTTGGTGAAAA+TGG | - | chr3.1:80737960-80737979 | MS.gene48507:intron | 35.0% |
| !! | GTACTTTTGAGAATACGCAT+GGG | - | chr3.1:80737712-80737731 | MS.gene48507:intron | 35.0% |
| !! | GTTTCTTGGTTGGTGAAAAT+GGG | - | chr3.1:80737961-80737980 | MS.gene48507:intron | 35.0% |
| !! | TCTTGTATCGATTCAGTAGA+TGG | - | chr3.1:80739163-80739182 | MS.gene48507:CDS | 35.0% |
| !! | TGATAGTAAAGGTGCTCAAT+TGG | - | chr3.1:80738262-80738281 | MS.gene48507:intron | 35.0% |
| !! | TGTACTTTTGAGAATACGCA+TGG | - | chr3.1:80737711-80737730 | MS.gene48507:intron | 35.0% |
| !! | TTCTGTTGTTGTTGGTTCTT+TGG | - | chr3.1:80738478-80738497 | MS.gene48507:intron | 35.0% |
| !! | TTTGATGGAAAGTGGATTGT+GGG | - | chr3.1:80738596-80738615 | MS.gene48507:intron | 35.0% |
| !!! | ATTTTATCGCGAAAGGTGTT+TGG | - | chr3.1:80737631-80737650 | MS.gene48507:intron | 35.0% |
| !!! | TTTTATCGCGAAAGGTGTTT+GGG | - | chr3.1:80737632-80737651 | MS.gene48507:intron | 35.0% |
| !!! | TTTTGATGGAAAGTGGATTG+TGG | - | chr3.1:80738595-80738614 | MS.gene48507:intron | 35.0% |
| AACAACCAAGTAAGTATCCG+TGG | + | chr3.1:80738624-80738643 | None:intergenic | 40.0% | |
| AACTACGAAGATGCAAACGA+AGG | - | chr3.1:80737249-80737268 | MS.gene48507:CDS | 40.0% | |
| AACTGGGATTCATGGAAAAG+GGG | - | chr3.1:80738007-80738026 | MS.gene48507:intron | 40.0% | |
| AATAGTAGAAGCTGTCTGCT+TGG | - | chr3.1:80739392-80739411 | MS.gene48507:CDS | 40.0% | |
| ACCGTGTTTACCGATAAAGA+TGG | - | chr3.1:80738650-80738669 | MS.gene48507:intron | 40.0% | |
| ACTGCTACAAGATAGTTCTC+AGG | - | chr3.1:80740152-80740171 | MS.gene48507:CDS | 40.0% | |
| AGATAAAGCTTAACGGCGTT+AGG | + | chr3.1:80737375-80737394 | None:intergenic | 40.0% | |
| ATGACTCCATTGTTGAAAGC+CGG | - | chr3.1:80740176-80740195 | MS.gene48507:CDS | 40.0% | |
| ATTGGGGTAGCTATAACCAA+TGG | + | chr3.1:80740244-80740263 | None:intergenic | 40.0% | |
| CAAACTTGTCGTGCATAAAC+CGG | + | chr3.1:80740198-80740217 | None:intergenic | 40.0% | |
| CAACACAGGTGTACTCATAT+TGG | + | chr3.1:80738390-80738409 | None:intergenic | 40.0% | |
| CAACTGGGATTCATGGAAAA+GGG | - | chr3.1:80738006-80738025 | MS.gene48507:intron | 40.0% | |
| CAAGCTTAAGGTTTACGGTA+AGG | - | chr3.1:80737755-80737774 | MS.gene48507:intron | 40.0% | |
| CACCAGTTTGATATTGAGAC+AGG | - | chr3.1:80738173-80738192 | MS.gene48507:intron | 40.0% | |
| CCCATCTTTATCGGTAAACA+CGG | + | chr3.1:80738654-80738673 | None:intergenic | 40.0% | |
| CCGTGTTTACCGATAAAGAT+GGG | - | chr3.1:80738651-80738670 | MS.gene48507:intron | 40.0% | |
| CGTGATATGGAACTTTCAAC+AGG | - | chr3.1:80740075-80740094 | MS.gene48507:CDS | 40.0% | |
| CTGCTACAAGATAGTTCTCA+GGG | - | chr3.1:80740153-80740172 | MS.gene48507:CDS | 40.0% | |
| CTGGATAACAGTTTCTTGGT+TGG | - | chr3.1:80737951-80737970 | MS.gene48507:intron | 40.0% | |
| GAATTTGAGGAAGCTGCAAA+TGG | - | chr3.1:80737900-80737919 | MS.gene48507:intron | 40.0% | |
| GACGAAGTTGAAGAAGAAGA+TGG | - | chr3.1:80737498-80737517 | MS.gene48507:intron | 40.0% | |
| GAGTACACCTGTGTTGAATT+GGG | - | chr3.1:80738394-80738413 | MS.gene48507:intron | 40.0% | |
| GATAAAGCTTAACGGCGTTA+GGG | + | chr3.1:80737374-80737393 | None:intergenic | 40.0% | |
| GATCCTGAACTATTCCATGA+CGG | + | chr3.1:80738352-80738371 | None:intergenic | 40.0% | |
| GGGTGTAAAATAAGGTTGGA+AGG | + | chr3.1:80739582-80739601 | None:intergenic | 40.0% | |
| GTGAGTGAAGAAATTGATGG+GGG | + | chr3.1:80739472-80739491 | None:intergenic | 40.0% | |
| GTTAAAACTCGTTGTGTTGG+TGG | - | chr3.1:80737462-80737481 | MS.gene48507:intron | 40.0% | |
| GTTGTGACTGAATGGAGATT+TGG | - | chr3.1:80738200-80738219 | MS.gene48507:intron | 40.0% | |
| GTTTGATATTGAGACAGGGA+AGG | - | chr3.1:80738178-80738197 | MS.gene48507:intron | 40.0% | |
| TAATTCCCCCAACGCAAAAT+GGG | - | chr3.1:80737407-80737426 | MS.gene48507:CDS | 40.0% | |
| TCCCTGTCTCAATATCAAAC+TGG | + | chr3.1:80738178-80738197 | None:intergenic | 40.0% | |
| TGAGTACACCTGTGTTGAAT+TGG | - | chr3.1:80738393-80738412 | MS.gene48507:intron | 40.0% | |
| TGGTTCACCTGTTACTAATG+TGG | - | chr3.1:80738565-80738584 | MS.gene48507:intron | 40.0% | |
| TTCTATCAACTCTATGAGGC+AGG | - | chr3.1:80738520-80738539 | MS.gene48507:intron | 40.0% | |
| TTTCAGTGCTTTGCTACAAC+TGG | - | chr3.1:80738449-80738468 | MS.gene48507:intron | 40.0% | |
| ! | AAGCTTTATCTTCACATCGG+TGG | - | chr3.1:80737384-80737403 | MS.gene48507:CDS | 40.0% |
| ! | AATTACCCATTTTGCGTTGG+GGG | + | chr3.1:80737415-80737434 | None:intergenic | 40.0% |
| ! | ATGATGCTGATGAGGGTTTT+TGG | - | chr3.1:80737526-80737545 | MS.gene48507:intron | 40.0% |
| ! | CATAAACCGGCTTTCAACAA+TGG | + | chr3.1:80740185-80740204 | None:intergenic | 40.0% |
| ! | CATGCTTTTGATGAGTCCAT+TGG | - | chr3.1:80738121-80738140 | MS.gene48507:intron | 40.0% |
| ! | CCAAAAAGCTCAGTTTTCGT+GGG | - | chr3.1:80738781-80738800 | MS.gene48507:CDS | 40.0% |
| ! | GAATGGAGATTTGGTAAGGA+TGG | - | chr3.1:80738209-80738228 | MS.gene48507:intron | 40.0% |
| ! | GACTGAATGGAGATTTGGTA+AGG | - | chr3.1:80738205-80738224 | MS.gene48507:intron | 40.0% |
| ! | GCTTTTGTTAACTTTGGTGG+TGG | - | chr3.1:80738029-80738048 | MS.gene48507:intron | 40.0% |
| ! | GGGTTCAACTTTTCTTGGAT+TGG | - | chr3.1:80738292-80738311 | MS.gene48507:intron | 40.0% |
| ! | GTAGGGGTGTAAAATAAGGT+TGG | + | chr3.1:80739586-80739605 | None:intergenic | 40.0% |
| ! | TCCAAAAAGCTCAGTTTTCG+TGG | - | chr3.1:80738780-80738799 | MS.gene48507:CDS | 40.0% |
| ! | TGATGCTGATGAGGGTTTTT+GGG | - | chr3.1:80737527-80737546 | MS.gene48507:intron | 40.0% |
| ! | TGCTCTGGATAACAGTTTCT+TGG | - | chr3.1:80737947-80737966 | MS.gene48507:intron | 40.0% |
| !! | ACGGATTGGACTCTTAGTAA+GGG | + | chr3.1:80739793-80739812 | None:intergenic | 40.0% |
| !! | GTTGTTGTTGGTTCTTTGGA+TGG | - | chr3.1:80738482-80738501 | MS.gene48507:intron | 40.0% |
| !! | TACGGATTGGACTCTTAGTA+AGG | + | chr3.1:80739794-80739813 | None:intergenic | 40.0% |
| AAAACTGCCTTTCCTGGACT+TGG | - | chr3.1:80738545-80738564 | MS.gene48507:intron | 45.0% | |
| AAGTTGCTGATGAGTCGATG+TGG | - | chr3.1:80737802-80737821 | MS.gene48507:intron | 45.0% | |
| AATATCCCAGAGTCTTGGAG+AGG | - | chr3.1:80739438-80739457 | MS.gene48507:CDS | 45.0% | |
| ACAGCCTAAAGGTGGTAGAA+AGG | + | chr3.1:80739546-80739565 | None:intergenic | 45.0% | |
| ACAGGGTCATCAGTTCTCTA+GGG | - | chr3.1:80738418-80738437 | MS.gene48507:intron | 45.0% | |
| AGCCTAAAGGTGGTAGAAAG+GGG | + | chr3.1:80739544-80739563 | None:intergenic | 45.0% | |
| AGGTGCTCAATTGGATCCAT+CGG | - | chr3.1:80738271-80738290 | MS.gene48507:intron | 45.0% | |
| AGTTGCTGATGAGTCGATGT+GGG | - | chr3.1:80737803-80737822 | MS.gene48507:intron | 45.0% | |
| CAGCAAGATGCGAATCAAGA+GGG | + | chr3.1:80738745-80738764 | None:intergenic | 45.0% | |
| CAGCCTAAAGGTGGTAGAAA+GGG | + | chr3.1:80739545-80739564 | None:intergenic | 45.0% | |
| CCAAGAAAAGTTGAACCCGA+TGG | + | chr3.1:80738290-80738309 | None:intergenic | 45.0% | |
| CGACATATAGTGGCTACTGT+GGG | - | chr3.1:80740043-80740062 | MS.gene48507:CDS | 45.0% | |
| CTTCTCAAAGAGTCCTGGTT+CGG | - | chr3.1:80737842-80737861 | MS.gene48507:intron | 45.0% | |
| GAAACAGGAGCGACATATAG+TGG | - | chr3.1:80740033-80740052 | MS.gene48507:CDS | 45.0% | |
| GACTTCGAGTAACAGCCTAA+AGG | + | chr3.1:80739557-80739576 | None:intergenic | 45.0% | |
| GATAGCTTCTCAAAGAGTCC+TGG | - | chr3.1:80737837-80737856 | MS.gene48507:intron | 45.0% | |
| GCAACTGGGATTCATGGAAA+AGG | - | chr3.1:80738005-80738024 | MS.gene48507:intron | 45.0% | |
| GGATTTGAGGGAGGAATTTG+AGG | - | chr3.1:80737887-80737906 | MS.gene48507:intron | 45.0% | |
| GGTCTCAGCTTTCATGAGAA+GGG | + | chr3.1:80738099-80738118 | None:intergenic | 45.0% | |
| GTAACTCAGGTGACAGAGAA+CGG | - | chr3.1:80740010-80740029 | MS.gene48507:CDS | 45.0% | |
| GTAATTCCCCCAACGCAAAA+TGG | - | chr3.1:80737406-80737425 | MS.gene48507:CDS | 45.0% | |
| TAACTCAGGTGACAGAGAAC+GGG | - | chr3.1:80740011-80740030 | MS.gene48507:CDS | 45.0% | |
| TGACCGTCATGGAATAGTTC+AGG | - | chr3.1:80738346-80738365 | MS.gene48507:intron | 45.0% | |
| TGCTTTGCTACAACTGGTGA+TGG | - | chr3.1:80738455-80738474 | MS.gene48507:intron | 45.0% | |
| TGGGAAAGTTCAGCGTGATA+TGG | - | chr3.1:80740062-80740081 | MS.gene48507:CDS | 45.0% | |
| TGGTCTCAGCTTTCATGAGA+AGG | + | chr3.1:80738100-80738119 | None:intergenic | 45.0% | |
| TGTCTGCTTGGCAACAGAAT+AGG | - | chr3.1:80739404-80739423 | MS.gene48507:CDS | 45.0% | |
| TTCGAGTAACAGCCTAAAGG+TGG | + | chr3.1:80739554-80739573 | None:intergenic | 45.0% | |
| TTGAGGAAGCTGCAAATGGT+GGG | - | chr3.1:80737904-80737923 | MS.gene48507:intron | 45.0% | |
| TTTGAGGAAGCTGCAAATGG+TGG | - | chr3.1:80737903-80737922 | MS.gene48507:intron | 45.0% | |
| ! | AAATGGTGGGATTCAGAGCT+TGG | - | chr3.1:80737917-80737936 | MS.gene48507:intron | 45.0% |
| ! | AACTTTCGAGTAAACCGTCG+CGG | + | chr3.1:80737191-80737210 | None:intergenic | 45.0% |
| ! | ACGGTAAGGATTTTCTTGGG+TGG | - | chr3.1:80737769-80737788 | MS.gene48507:intron | 45.0% |
| ! | ATCGACTCATCAGCAACTTC+CGG | + | chr3.1:80737801-80737820 | None:intergenic | 45.0% |
| ! | CCATCGGGTTCAACTTTTCT+TGG | - | chr3.1:80738287-80738306 | MS.gene48507:intron | 45.0% |
| ! | CCCACGAAAACTGAGCTTTT+TGG | + | chr3.1:80738784-80738803 | None:intergenic | 45.0% |
| ! | CGGTAAGGATTTTCTTGGGT+GGG | - | chr3.1:80737770-80737789 | MS.gene48507:intron | 45.0% |
| ! | CGTGTGGATTTTATCGCGAA+AGG | - | chr3.1:80737624-80737643 | MS.gene48507:intron | 45.0% |
| ! | GGGGCTTTTGTTAACTTTGG+TGG | - | chr3.1:80738026-80738045 | MS.gene48507:intron | 45.0% |
| ! | GGTGATGATGATGCTGATGA+GGG | - | chr3.1:80737519-80737538 | MS.gene48507:intron | 45.0% |
| ! | GGTGATGGTTCTGTTGTTGT+TGG | - | chr3.1:80738470-80738489 | MS.gene48507:intron | 45.0% |
| ! | TGGACTCATCAAAAGCATGC+TGG | + | chr3.1:80738120-80738139 | None:intergenic | 45.0% |
| ! | TGGTGATGATGATGCTGATG+AGG | - | chr3.1:80737518-80737537 | MS.gene48507:intron | 45.0% |
| ! | TTTTCTTGGGTGGGCAAAAC+CGG | - | chr3.1:80737779-80737798 | MS.gene48507:intron | 45.0% |
| !! | AAAGTGGATTGTGGGAACCA+CGG | - | chr3.1:80738604-80738623 | MS.gene48507:intron | 45.0% |
| !! | GGTTGGTGAAAATGGGATTC+AGG | - | chr3.1:80737968-80737987 | MS.gene48507:intron | 45.0% |
| ACCCCCTTTCTACCACCTTT+AGG | - | chr3.1:80739539-80739558 | MS.gene48507:CDS | 50.0% | |
| ACCTGTGTTGAATTGGGCAC+AGG | - | chr3.1:80738400-80738419 | MS.gene48507:intron | 50.0% | |
| AGCAGCTCTTTAGACCCTGT+TGG | + | chr3.1:80740132-80740151 | None:intergenic | 50.0% | |
| AGGGTCATCAGTTCTCTAGG+GGG | - | chr3.1:80738420-80738439 | MS.gene48507:intron | 50.0% | |
| AGGTGAACCAAGTCCAGGAA+AGG | + | chr3.1:80738555-80738574 | None:intergenic | 50.0% | |
| CACAGGGTCATCAGTTCTCT+AGG | - | chr3.1:80738417-80738436 | MS.gene48507:intron | 50.0% | |
| CAGGGAAGGTTGTGACTGAA+TGG | - | chr3.1:80738192-80738211 | MS.gene48507:intron | 50.0% | |
| CAGGGTCATCAGTTCTCTAG+GGG | - | chr3.1:80738419-80738438 | MS.gene48507:intron | 50.0% | |
| CCAGCAAGATGCGAATCAAG+AGG | + | chr3.1:80738746-80738765 | None:intergenic | 50.0% | |
| CCTGTGTTGAATTGGGCACA+GGG | - | chr3.1:80738401-80738420 | MS.gene48507:intron | 50.0% | |
| GAGAGCGAGTCAGGATTTGA+GGG | - | chr3.1:80737875-80737894 | MS.gene48507:intron | 50.0% | |
| GATTGTTACCGCAGCCAACA+GGG | - | chr3.1:80740115-80740134 | MS.gene48507:CDS | 50.0% | |
| GCCTAAAGGTGGTAGAAAGG+GGG | + | chr3.1:80739543-80739562 | None:intergenic | 50.0% | |
| GCGACATATAGTGGCTACTG+TGG | - | chr3.1:80740042-80740061 | MS.gene48507:CDS | 50.0% | |
| GCTATAACCAATGGAGCCTC+AGG | + | chr3.1:80740235-80740254 | None:intergenic | 50.0% | |
| GCTCATTCAGCATGTCCAAC+AGG | - | chr3.1:80740272-80740291 | MS.gene48507:CDS | 50.0% | |
| GGGAACCACGGATACTTACT+TGG | - | chr3.1:80738616-80738635 | MS.gene48507:intron | 50.0% | |
| GGTGCTCAATTGGATCCATC+GGG | - | chr3.1:80738272-80738291 | MS.gene48507:intron | 50.0% | |
| GTAACAGGTGAACCAAGTCC+AGG | + | chr3.1:80738560-80738579 | None:intergenic | 50.0% | |
| TGAGAGCGAGTCAGGATTTG+AGG | - | chr3.1:80737874-80737893 | MS.gene48507:intron | 50.0% | |
| TGATTCTCCTGAGGCTCCAT+TGG | - | chr3.1:80740225-80740244 | MS.gene48507:CDS | 50.0% | |
| TGATTGTTACCGCAGCCAAC+AGG | - | chr3.1:80740114-80740133 | MS.gene48507:CDS | 50.0% | |
| TTCGTCGTCAACGTCGAAGT+TGG | - | chr3.1:80738052-80738071 | MS.gene48507:intron | 50.0% | |
| ! | AAATCCTGACTCGCTCTCAC+TGG | + | chr3.1:80737873-80737892 | None:intergenic | 50.0% |
| ! | AAGGGGGTGTAGTAGAGTAG+GGG | + | chr3.1:80739602-80739621 | None:intergenic | 50.0% |
| ! | AGAAGGGGGTGTAGTAGAGT+AGG | + | chr3.1:80739604-80739623 | None:intergenic | 50.0% |
| ! | CCTCTTGATTCGCATCTTGC+TGG | - | chr3.1:80738743-80738762 | MS.gene48507:CDS | 50.0% |
| ! | GAAGGGGGTGTAGTAGAGTA+GGG | + | chr3.1:80739603-80739622 | None:intergenic | 50.0% |
| ! | TCTTTAGACCCTGTTGGCTG+CGG | + | chr3.1:80740126-80740145 | None:intergenic | 50.0% |
| !! | AAAGGGGGTGTTGGAAGCAA+GGG | + | chr3.1:80739528-80739547 | None:intergenic | 50.0% |
| !! | TGCAGTCACTGATTCTCCTG+AGG | - | chr3.1:80740216-80740235 | MS.gene48507:CDS | 50.0% |
| AGCGAGTCAGGATTTGAGGG+AGG | - | chr3.1:80737878-80737897 | MS.gene48507:intron | 55.0% | |
| CAGGCGAAAACTGCCTTTCC+TGG | - | chr3.1:80738539-80738558 | MS.gene48507:intron | 55.0% | |
| CCATGCCTCTCCAAGACTCT+GGG | + | chr3.1:80739446-80739465 | None:intergenic | 55.0% | |
| CCCTGTGCCCAATTCAACAC+AGG | + | chr3.1:80738404-80738423 | None:intergenic | 55.0% | |
| GGGTTGAGCTTGAGCAACCT+TGG | + | chr3.1:80738725-80738744 | None:intergenic | 55.0% | |
| GGTGACAGAGAACGGGAAAC+AGG | - | chr3.1:80740018-80740037 | MS.gene48507:CDS | 55.0% | |
| GTCGTCAACGTCGAAGTTGG+TGG | - | chr3.1:80738055-80738074 | MS.gene48507:intron | 55.0% | |
| TCCATGCCTCTCCAAGACTC+TGG | + | chr3.1:80739447-80739466 | None:intergenic | 55.0% | |
| TGGGATATGCGTGACCGTCA+TGG | - | chr3.1:80738335-80738354 | MS.gene48507:intron | 55.0% | |
| ! | AGGTGGTAGAAAGGGGGTGT+TGG | + | chr3.1:80739537-80739556 | None:intergenic | 55.0% |
| !! | GAAAGGGGGTGTTGGAAGCA+AGG | + | chr3.1:80739529-80739548 | None:intergenic | 55.0% |
| CACACGACGCTGATGCGCTA+GGG | + | chr3.1:80737610-80737629 | None:intergenic | 60.0% | |
| CCCAGAGTCTTGGAGAGGCA+TGG | - | chr3.1:80739443-80739462 | MS.gene48507:CDS | 60.0% | |
| GGGATTCAGAGCTTGGCGCT+TGG | - | chr3.1:80737924-80737943 | MS.gene48507:intron | 60.0% | |
| !! | GGGGTGTTGGAAGCAAGGGA+AGG | + | chr3.1:80739524-80739543 | None:intergenic | 60.0% |
| CACGCCAGTGAGAGCGAGTC+AGG | - | chr3.1:80737866-80737885 | MS.gene48507:intron | 65.0% | |
| CCACACGACGCTGATGCGCT+AGG | + | chr3.1:80737611-80737630 | None:intergenic | 65.0% | |
| CCTAGCGCATCAGCGTCGTG+TGG | - | chr3.1:80737608-80737627 | MS.gene48507:intron | 65.0% | |
| ! | CTGACTCGCTCTCACTGGCG+TGG | + | chr3.1:80737868-80737887 | None:intergenic | 65.0% |
| !! | GAGCTTGGCGCTTGGTGCTC+TGG | - | chr3.1:80737932-80737951 | MS.gene48507:intron | 65.0% |
| CTCACTGGCGTGGCCGAACC+AGG | + | chr3.1:80737858-80737877 | None:intergenic | 70.0% | |
| GGTGGCGCTCACAGCCGCGA+CGG | - | chr3.1:80737174-80737193 | MS.gene48507:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 80737171 | 80740300 | 80737171 | ID=MS.gene48507 |
| chr3.1 | mRNA | 80737171 | 80740300 | 80737171 | ID=MS.gene48507.t1;Parent=MS.gene48507 |
| chr3.1 | exon | 80738669 | 80740300 | 80738669 | ID=MS.gene48507.t1.exon1;Parent=MS.gene48507.t1 |
| chr3.1 | CDS | 80738669 | 80740300 | 80738669 | ID=cds.MS.gene48507.t1;Parent=MS.gene48507.t1 |
| chr3.1 | exon | 80737171 | 80737452 | 80737171 | ID=MS.gene48507.t1.exon2;Parent=MS.gene48507.t1 |
| chr3.1 | CDS | 80737171 | 80737452 | 80737171 | ID=cds.MS.gene48507.t1;Parent=MS.gene48507.t1 |
| Gene Sequence |
| Protein sequence |
