AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49262

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49262.t1 MTR_4g103540 97.791 679 13 1 1 677 15 693 0.0 1362
MS.gene49262.t1 MTR_8g021330 40.510 627 322 15 82 676 9 616 1.71e-140 424
MS.gene49262.t1 MTR_7g013770 44.404 545 270 11 146 674 150 677 2.27e-139 423
MS.gene49262.t1 MTR_5g073450 33.886 664 391 11 17 665 4 634 8.80e-121 374
MS.gene49262.t1 MTR_3g025900 38.732 568 313 12 116 675 79 619 5.60e-120 371
MS.gene49262.t1 MTR_1g090620 32.738 672 392 12 17 664 6 641 9.34e-119 369
MS.gene49262.t1 MTR_1g057560 34.574 645 371 13 32 664 20 625 1.82e-116 363
MS.gene49262.t1 MTR_3g031130 34.545 660 378 14 17 665 4 620 2.70e-115 359
MS.gene49262.t1 MTR_6g033310 35.636 550 317 9 139 676 213 737 7.38e-106 338
MS.gene49262.t1 MTR_7g026630 36.531 542 306 13 144 671 137 654 7.66e-105 333
MS.gene49262.t1 MTR_5g073460 38.914 442 262 4 229 665 255 693 6.97e-98 316
MS.gene49262.t1 MTR_1g117090 33.110 598 331 12 111 665 98 669 3.81e-96 311
MS.gene49262.t1 MTR_2g096230 34.667 450 270 6 227 668 152 585 2.70e-86 282
MS.gene49262.t1 MTR_4g062330 33.034 557 325 13 116 658 76 598 1.12e-82 274
MS.gene49262.t1 MTR_1g067480 29.883 599 364 16 81 662 41 600 1.70e-76 257
MS.gene49262.t1 MTR_1g067460 30.033 606 355 16 81 662 39 599 1.12e-69 238
MS.gene49262.t1 MTR_5g073480 30.645 434 233 8 229 658 256 625 2.89e-54 197
MS.gene49262.t1 MTR_5g073620 31.176 340 207 4 220 554 275 592 6.66e-51 191
MS.gene49262.t1 MTR_5g073620 35.429 175 112 1 491 665 896 1069 2.57e-20 96.7
MS.gene49262.t1 MTR_5g074130 29.954 434 281 10 237 662 255 673 8.93e-48 180
MS.gene49262.t1 MTR_5g073920 27.540 443 291 8 229 665 242 660 2.67e-41 160
MS.gene49262.t1 MTR_1g009620 28.256 453 281 14 237 667 226 656 2.02e-37 149
MS.gene49262.t1 MTR_3g464010 28.009 432 277 11 242 662 258 666 5.33e-37 147
MS.gene49262.t1 MTR_5g073900 26.276 392 230 11 250 632 1 342 3.57e-34 134
MS.gene49262.t1 MTR_1g017910 26.485 404 271 11 259 641 267 665 7.03e-33 135
MS.gene49262.t1 MTR_5g073770 32.653 196 126 3 220 410 188 382 6.69e-30 122
MS.gene49262.t1 MTR_5g093530 26.462 359 228 7 306 662 246 570 1.20e-26 115
MS.gene49262.t1 MTR_4g008260 24.945 453 304 14 233 671 216 646 1.80e-25 112
MS.gene49262.t1 MTR_0229s0040 33.684 190 119 3 483 667 24 211 1.22e-24 103
MS.gene49262.t1 MTR_5g073490 33.951 162 89 4 504 663 8 153 4.49e-21 90.9
MS.gene49262.t1 MTR_5g073780 34.286 175 114 1 491 665 51 224 5.93e-21 92.8
MS.gene49262.t1 MTR_5g073960 28.415 183 117 4 229 408 247 418 2.23e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49262.t1 AT5G50380 57.625 682 242 10 20 676 24 683 0.0 735
MS.gene49262.t1 AT1G72470 40.510 627 324 12 82 676 23 632 8.58e-148 444
MS.gene49262.t1 AT3G14090 39.903 619 349 11 76 675 9 623 7.19e-140 423
MS.gene49262.t1 AT1G54090 45.275 455 233 8 232 674 170 620 5.50e-131 400
MS.gene49262.t1 AT3G29400 38.487 595 300 10 115 675 96 658 8.10e-120 372
MS.gene49262.t1 AT5G58430 34.071 678 354 15 18 665 5 619 6.88e-116 361
MS.gene49262.t1 AT5G52340 33.591 646 376 14 31 664 19 623 1.20e-115 360
MS.gene49262.t1 AT5G03540 33.487 651 375 13 32 664 20 630 6.89e-113 353
MS.gene49262.t1 AT5G03540 32.887 672 377 16 32 664 20 656 2.89e-108 342
MS.gene49262.t1 AT5G13150 36.891 534 308 10 147 669 134 649 1.36e-107 340
MS.gene49262.t1 AT5G03540 35.714 546 300 10 137 664 3 515 5.67e-107 335
MS.gene49262.t1 AT5G61010 32.030 665 393 14 16 667 11 629 2.10e-98 316
MS.gene49262.t1 AT5G61010 32.030 665 393 14 16 667 11 629 2.10e-98 316
MS.gene49262.t1 AT1G07000 31.071 663 374 16 17 665 4 597 5.81e-93 300
MS.gene49262.t1 AT5G13990 35.150 532 311 11 146 667 177 684 4.13e-90 295
MS.gene49262.t1 AT2G28640 32.892 529 302 10 147 665 94 579 3.04e-87 285
MS.gene49262.t1 AT5G52350 33.830 470 282 8 203 664 129 577 1.55e-84 278
MS.gene49262.t1 AT5G59730 35.647 533 308 12 147 665 88 599 4.23e-81 270
MS.gene49262.t1 AT5G59730 35.660 530 306 12 150 665 91 599 5.33e-81 270
MS.gene49262.t1 AT1G07725 31.132 530 319 9 147 664 96 591 3.54e-79 264
MS.gene49262.t1 AT2G39380 30.490 551 340 12 129 666 92 612 1.39e-73 250
MS.gene49262.t1 AT3G09520 29.834 543 315 15 147 662 101 604 3.29e-70 240
MS.gene49262.t1 AT3G09530 31.481 540 315 14 147 664 96 602 3.68e-69 238
MS.gene49262.t1 AT3G55150 29.268 533 340 10 147 666 104 612 3.19e-64 224
MS.gene49262.t1 AT2G28650 33.882 425 254 8 243 662 152 554 6.10e-63 219
MS.gene49262.t1 AT4G31540 26.477 457 307 14 225 666 216 658 2.28e-35 142
MS.gene49262.t1 AT1G51640 26.126 444 289 14 243 663 199 626 1.59e-26 115

Find 185 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGTTATAACCGGCTTTC+TGG 0.087033 8.2:+20708286 None:intergenic
GGTTGAGTGTTTGGCAATTC+TGG 0.129191 8.2:-20708738 MS.gene49262:CDS
GGAGAAGCTGTTTAGGATTT+TGG 0.131734 8.2:-20708465 MS.gene49262:CDS
CTCAGATCTTATAGAGGTTT+TGG 0.163380 8.2:-20707967 MS.gene49262:CDS
CATGTCTTCACGATCTTCTT+TGG 0.189109 8.2:+20709444 None:intergenic
TTCAAATTCAAAATTGATTC+AGG 0.215721 8.2:+20708842 None:intergenic
ACCTGCATACCGCTCGTTTA+TGG 0.216171 8.2:-20707679 MS.gene49262:CDS
CGATGCTATGGATTCGCTTT+TGG 0.220306 8.2:-20708204 MS.gene49262:CDS
TATAATCCGCAAGCAGTTTC+AGG 0.258964 8.2:+20708228 None:intergenic
GTTATGATGTTGTTGAATTT+TGG 0.284340 8.2:-20708518 MS.gene49262:CDS
TGATGATTTGTTTGTTGATT+TGG 0.285215 8.2:-20708870 MS.gene49262:CDS
GGTGGGTTTGATGATAATTC+TGG 0.285342 8.2:-20708956 MS.gene49262:CDS
GAGAGATGCTTTGCCTGAAT+TGG 0.303022 8.2:-20708426 MS.gene49262:CDS
TCCAGAAAGCCGGTTATAAC+TGG 0.303990 8.2:-20708287 MS.gene49262:CDS
GATGATAATTCTGGGAGTTT+TGG 0.322543 8.2:-20708947 MS.gene49262:CDS
TTTGCCTGAATTGGAGGATA+TGG 0.324739 8.2:-20708417 MS.gene49262:CDS
GTCGTCGGATTTGGAAGATT+TGG 0.333151 8.2:+20709354 None:intergenic
AAGCTGTTAAGGTCGTTGTT+AGG 0.336199 8.2:-20708637 MS.gene49262:CDS
CCTGCATACCGCTCGTTTAT+GGG 0.339799 8.2:-20707678 MS.gene49262:CDS
ATGTCTTCACGATCTTCTTT+GGG 0.340161 8.2:+20709445 None:intergenic
CCTTGCTCCAACAGGCTCTA+AGG 0.347147 8.2:+20707889 None:intergenic
GAGGGGACAAAGCTTCTAAC+TGG 0.348022 8.2:+20708126 None:intergenic
CACGGCGGCGGCGGAGCCAC+CGG 0.355930 8.2:-20709529 MS.gene49262:CDS
GAAGTTTGAGTGGAAGAGTT+TGG 0.356231 8.2:-20708684 MS.gene49262:CDS
TTGGCTTGTTTGAGGGATGA+AGG 0.360266 8.2:-20707864 MS.gene49262:CDS
AGCCTGTTGGAGCAAGGCCT+TGG 0.361426 8.2:-20707883 MS.gene49262:CDS
GGCGGCGGAGCCACCGGTGC+CGG 0.362966 8.2:-20709523 MS.gene49262:CDS
GTTGAGTGTTTGGCAATTCT+GGG 0.364660 8.2:-20708737 MS.gene49262:CDS
GGTCGCCGGAGAAGCTGTTT+AGG 0.371076 8.2:-20708472 MS.gene49262:CDS
TTTGGTGATGTGGGTGATCC+TGG 0.375875 8.2:-20708929 MS.gene49262:CDS
TGACGCGTTGGTTGAGTGTT+TGG 0.383090 8.2:-20708747 MS.gene49262:CDS
ATATGAGAGGGAGTGTTTGC+AGG 0.388456 8.2:-20708789 MS.gene49262:CDS
GCAAGGCCTTGGCTTGTTTG+AGG 0.389482 8.2:-20707872 MS.gene49262:CDS
AAGGGTGTGCTTAGAGGACT+TGG 0.391145 8.2:-20708365 MS.gene49262:CDS
TATTTATTAGATTTATTTGA+AGG 0.391983 8.2:-20707582 MS.gene49262:CDS
CAAGGCCTTGGCTTGTTTGA+GGG 0.393731 8.2:-20707871 MS.gene49262:CDS
ACGATCCAATATAATCTTAC+CGG 0.397560 8.2:+20709126 None:intergenic
TGGATGAGAGGATGAAGAAT+TGG 0.402092 8.2:-20708664 MS.gene49262:CDS
AGCCAAGGCCTTGCTCCAAC+AGG 0.402360 8.2:+20707881 None:intergenic
CTGAGTTTGAGAGTTGTATT+CGG 0.403325 8.2:-20708319 MS.gene49262:CDS
GAGGCGAAGGGTGTGCTTAG+AGG 0.408805 8.2:-20708371 MS.gene49262:CDS
GCCGCCGTGGTTGGTGGTGG+TGG 0.410894 8.2:+20709543 None:intergenic
GGGGAGGTTTAGCGGTCAGC+TGG 0.411054 8.2:-20707658 MS.gene49262:CDS
TTGGTGGTGGTGGCGGCCAT+AGG 0.411564 8.2:+20709553 None:intergenic
TTAGCCGGTGTAGTACTAAT+AGG 0.412771 8.2:-20709015 MS.gene49262:CDS
TGTTTGAGGGATGAAGGGGT+TGG 0.413469 8.2:-20707858 MS.gene49262:CDS
GGTTCGTAAGCGCCGCGGTC+AGG 0.413882 8.2:-20707934 MS.gene49262:CDS
TGGAATCGTCGCCGTTGATA+AGG 0.413973 8.2:+20709374 None:intergenic
GTAACCATATCCTCCAATTC+AGG 0.417224 8.2:+20708413 None:intergenic
TGGGTGATCCTGGTTCTCAT+AGG 0.419887 8.2:-20708919 MS.gene49262:CDS
GAATTGGGTGCAAGCTGTTA+AGG 0.422274 8.2:-20708648 MS.gene49262:CDS
TGCATCAAGGATGGCTTTGA+AGG 0.425408 8.2:-20707820 MS.gene49262:CDS
CGGTGGCTCCGCCGCCGCCG+TGG 0.434893 8.2:+20709530 None:intergenic
AGCTGTTAAGGTCGTTGTTA+GGG 0.435827 8.2:-20708636 MS.gene49262:CDS
TTCGCATCTCTTCACGAAGC+TGG 0.437799 8.2:+20707724 None:intergenic
GTTGATAAGGTCGGTGATAC+CGG 0.445597 8.2:+20709387 None:intergenic
GGCTCCGCCGCCGCCGTGGT+TGG 0.450387 8.2:+20709534 None:intergenic
ATATTATTGATCGGATGGTT+AGG 0.455899 8.2:-20708817 MS.gene49262:CDS
ACCTTCGACAACCGTCTCTC+CGG 0.457479 8.2:-20709406 MS.gene49262:CDS
TTCAGTTCGCAGGACGGTGC+CGG 0.459367 8.2:-20708977 MS.gene49262:CDS
CTTTCTCCGCAGCTTCGAAT+CGG 0.459685 8.2:+20709311 None:intergenic
CCCATAAACGAGCGGTATGC+AGG 0.460205 8.2:+20707678 None:intergenic
ACAGCGTTGAAATAGACTTC+AGG 0.460769 8.2:+20709214 None:intergenic
AAGCAGTTGCCATTTGTAAG+AGG 0.461420 8.2:-20708493 MS.gene49262:CDS
TGGCTTGTTTGAGGGATGAA+GGG 0.462221 8.2:-20707863 MS.gene49262:CDS
CGAGCCTCGACATGGCAACT+TGG 0.462336 8.2:+20709089 None:intergenic
ACCACCACCAACCACGGCGG+CGG 0.465623 8.2:-20709541 MS.gene49262:CDS
AAATAGACTTCAGGATCATT+CGG 0.468898 8.2:+20709223 None:intergenic
GTGGGTTTGATGATAATTCT+GGG 0.470117 8.2:-20708955 MS.gene49262:CDS
CAGCTGGAGGGAAGACATGC+AGG 0.472085 8.2:-20707642 MS.gene49262:CDS
TTGAGGGATGAAGGGGTTGG+AGG 0.475164 8.2:-20707855 MS.gene49262:CDS
ACCACCAACCACGGCGGCGG+CGG 0.479449 8.2:-20709538 MS.gene49262:CDS
TTCGATGTCTTTCAGTTCGC+AGG 0.481567 8.2:-20708987 MS.gene49262:CDS
TCTTCACGAAGCTGGTCATC+GGG 0.481866 8.2:+20707732 None:intergenic
CTGCTGTATTACATCACATA+AGG 0.483360 8.2:-20707554 MS.gene49262:CDS
AACAATATCTGTCGTCCTAG+AGG 0.484161 8.2:+20708107 None:intergenic
GAAAGATATTATTGATCGGA+TGG 0.484306 8.2:-20708822 MS.gene49262:CDS
CATGAACGTGGTGTTAGTCT+TGG 0.484870 8.2:-20708893 MS.gene49262:CDS
CTCTTCACGAAGCTGGTCAT+CGG 0.485803 8.2:+20707731 None:intergenic
AGTGGAAGAGTTTGGATGAG+AGG 0.486737 8.2:-20708676 MS.gene49262:CDS
AAGAGGTGCAGAAGTTTGAG+TGG 0.490479 8.2:-20708694 MS.gene49262:CDS
TGAACATCCCCAGTTATAAC+CGG 0.491360 8.2:+20708278 None:intergenic
GGATGAGAGGATGAAGAATT+GGG 0.498960 8.2:-20708663 MS.gene49262:CDS
CTCCGGCGACCTCTTACAAA+TGG 0.499086 8.2:+20708484 None:intergenic
ATTGATCGGATGGTTAGGTC+TGG 0.500159 8.2:-20708812 MS.gene49262:CDS
CCAGAAAGCCGGTTATAACT+GGG 0.500675 8.2:-20708286 MS.gene49262:CDS
AAAATCCTAAACAGCTTCTC+CGG 0.501012 8.2:+20708467 None:intergenic
CGAAGACCATGCATTGCAGC+AGG 0.503483 8.2:-20708036 MS.gene49262:CDS
GGACTTGGGGAGGCTGTGAA+AGG 0.503815 8.2:-20708350 MS.gene49262:CDS
TCGTTTATGGGGAGGTTTAG+CGG 0.504852 8.2:-20707666 MS.gene49262:CDS
TGAGAAATTGAGTATTGAAG+AGG 0.506438 8.2:-20708711 MS.gene49262:CDS
AGTTCGCAGGACGGTGCCGG+TGG 0.508132 8.2:-20708974 MS.gene49262:CDS
GCCGTGGTTGGTGGTGGTGG+CGG 0.509112 8.2:+20709546 None:intergenic
AAATAAGTCTCTAGATCCTC+CGG 0.509666 8.2:+20707600 None:intergenic
GTAAGCGCCGCGGTCAGGTA+CGG 0.511980 8.2:-20707929 MS.gene49262:CDS
GAGGTTTAGCGGTCAGCTGG+AGG 0.513245 8.2:-20707655 MS.gene49262:CDS
TGCGGATTATAGCGATGCTA+TGG 0.514545 8.2:-20708216 MS.gene49262:CDS
TTCCGCCGGATGCTGTTAGC+CGG 0.518041 8.2:-20709030 MS.gene49262:CDS
TATACAGGGTTCAGACAGCT+TGG 0.522120 8.2:-20707761 MS.gene49262:CDS
CAGGTACGGCAGTATGCTAC+GGG 0.525123 8.2:-20707915 MS.gene49262:CDS
TGTTTCAATGAAACAGCTAA+AGG 0.529199 8.2:-20708545 MS.gene49262:CDS
GGCTTGTTTGAGGGATGAAG+GGG 0.529766 8.2:-20707862 MS.gene49262:CDS
TCCGCCGCCGCCGTGGTTGG+TGG 0.530179 8.2:+20709537 None:intergenic
TGAGGGATGAAGGGGTTGGA+GGG 0.530800 8.2:-20707854 MS.gene49262:CDS
TCGCCGCCGATTAATTCCGC+TGG 0.530990 8.2:-20709154 MS.gene49262:CDS
CAGGGTTCAGACAGCTTGGA+AGG 0.532910 8.2:-20707757 MS.gene49262:CDS
GAAGGACTCAGATCTTATAG+AGG 0.537090 8.2:-20707973 MS.gene49262:CDS
AGATGCTTTGCCTGAATTGG+AGG 0.537441 8.2:-20708423 MS.gene49262:CDS
GAATGAGACTTCCAGAAAGC+CGG 0.539455 8.2:-20708297 MS.gene49262:CDS
CTTATGTGATGTAATACAGC+AGG 0.540840 8.2:+20707555 None:intergenic
GACTTGGGGAGGCTGTGAAA+GGG 0.541087 8.2:-20708349 MS.gene49262:CDS
CCGCAGCTTCGAATCGGTCA+AGG 0.541154 8.2:+20709317 None:intergenic
TCAGGTACGGCAGTATGCTA+CGG 0.542639 8.2:-20707916 MS.gene49262:CDS
TCGATCGTCTCCACCGGCAC+CGG 0.543468 8.2:+20709510 None:intergenic
GCCGCCGCCGTGGTTGGTGG+TGG 0.544351 8.2:+20709540 None:intergenic
TTAGAAGCTTTGTCCCCTCT+AGG 0.547956 8.2:-20708122 MS.gene49262:CDS
ATCGTCTCCACCGGCACCGG+TGG 0.548174 8.2:+20709513 None:intergenic
TGAATTGGAGGATATGGTTA+CGG 0.548359 8.2:-20708411 MS.gene49262:CDS
CGGGGTACCTTAGAGCCTGT+TGG 0.554700 8.2:-20707896 MS.gene49262:CDS
TTCATCCCTCAAACAAGCCA+AGG 0.558253 8.2:+20707866 None:intergenic
CTGCATACCGCTCGTTTATG+GGG 0.560603 8.2:-20707677 MS.gene49262:CDS
TAGCGTTCGTCGTGACGCGT+TGG 0.560625 8.2:-20708759 MS.gene49262:CDS
ATTTGAAAGATATTATTGAT+CGG 0.563345 8.2:-20708826 MS.gene49262:CDS
GCGAATAAATATATCAGAGA+AGG 0.564463 8.2:-20707706 MS.gene49262:CDS
GGAGAGACGGTTGTCGAAGG+TGG 0.566049 8.2:+20709408 None:intergenic
TTCATCACATAACGAGGCAA+AGG 0.566666 8.2:+20708254 None:intergenic
TGCCATTTGTAAGAGGTCGC+CGG 0.568876 8.2:-20708486 MS.gene49262:CDS
CTACACCGGCTAACAGCATC+CGG 0.569586 8.2:+20709025 None:intergenic
AGGGTGTGCTTAGAGGACTT+GGG 0.570928 8.2:-20708364 MS.gene49262:CDS
AAAACACCTGCTGCAATGCA+TGG 0.571711 8.2:+20708030 None:intergenic
CAAATACATCAAGTATGTAC+CGG 0.572141 8.2:-20707619 MS.gene49262:CDS
GCCGCCACCACCACCAACCA+CGG 0.572840 8.2:-20709547 MS.gene49262:CDS
GATGAACAATCTGCATTACC+TGG 0.578458 8.2:-20708006 MS.gene49262:CDS
CATACCGCTCGTTTATGGGG+AGG 0.579620 8.2:-20707674 MS.gene49262:CDS
CTCATCCTCGAGCCTCGACA+TGG 0.579888 8.2:+20709081 None:intergenic
ACAATATCTGTCGTCCTAGA+GGG 0.580122 8.2:+20708108 None:intergenic
AGGTTTAGCGGTCAGCTGGA+GGG 0.584483 8.2:-20707654 MS.gene49262:CDS
CTCTAATAATGCATCAAGGA+TGG 0.585042 8.2:-20707829 MS.gene49262:CDS
AGTCCTTCACTTTACGCACC+AGG 0.585464 8.2:+20707988 None:intergenic
TGATGAGATTATTCAGTGGA+TGG 0.587474 8.2:-20709191 MS.gene49262:CDS
GTTCGCAGGACGGTGCCGGT+GGG 0.588023 8.2:-20708973 MS.gene49262:CDS
AGTTGATTGACGAGAAGACT+CGG 0.589836 8.2:+20709261 None:intergenic
GGCGGAGCCACCGGTGCCGG+TGG 0.594474 8.2:-20709520 MS.gene49262:CDS
CCTTAGAGCCTGTTGGAGCA+AGG 0.595856 8.2:-20707889 MS.gene49262:CDS
TTACCTGGTGCGTAAAGTGA+AGG 0.597081 8.2:-20707991 MS.gene49262:CDS
TGAACTTGAGCACAATCTTG+AGG 0.601252 8.2:-20708075 MS.gene49262:CDS
CGATCCAAGTTGCCATGTCG+AGG 0.603013 8.2:-20709093 MS.gene49262:CDS
TGTGCTTAGAGGACTTGGGG+AGG 0.604725 8.2:-20708360 MS.gene49262:CDS
GGTTAGGTCTGGATATGAGA+GGG 0.609758 8.2:-20708801 MS.gene49262:CDS
AGTTGCCATGTCGAGGCTCG+AGG 0.615415 8.2:-20709086 MS.gene49262:CDS
GAGAACTCGATCGTCTCCAC+CGG 0.615520 8.2:+20709504 None:intergenic
GTTTGTGATTACTGAGGCGA+AGG 0.619367 8.2:-20708384 MS.gene49262:CDS
ATGTCTTTCAGTTCGCAGGA+CGG 0.623036 8.2:-20708983 MS.gene49262:CDS
ACCGGAGAGACGGTTGTCGA+AGG 0.623770 8.2:+20709405 None:intergenic
GCCGGTGTAGTACTAATAGG+AGG 0.627601 8.2:-20709012 MS.gene49262:CDS
GGTCGGTGATACCGGAGAGA+CGG 0.630028 8.2:+20709395 None:intergenic
TCTCATAGGTTTCATGAACG+TGG 0.632602 8.2:-20708905 MS.gene49262:CDS
GGGTGTGCTTAGAGGACTTG+GGG 0.635936 8.2:-20708363 MS.gene49262:CDS
TCCTCCTATTAGTACTACAC+CGG 0.639220 8.2:+20709011 None:intergenic
TCATGAAACCTATGAGAACC+AGG 0.642446 8.2:+20708911 None:intergenic
AGAATTATCATCAAACCCAC+CGG 0.644146 8.2:+20708958 None:intergenic
GCCACCACCACCAACCACGG+CGG 0.645487 8.2:-20709544 MS.gene49262:CDS
GATTTGTAATACTGTTCCGC+CGG 0.645631 8.2:-20709044 MS.gene49262:CDS
GGAGCTCTAATAATGCATCA+AGG 0.649173 8.2:-20707833 MS.gene49262:CDS
CCTTGACCGATTCGAAGCTG+CGG 0.650783 8.2:-20709317 MS.gene49262:CDS
TGGTTAGGTCTGGATATGAG+AGG 0.651249 8.2:-20708802 MS.gene49262:CDS
GAATTACCTGAAACTGCTTG+CGG 0.651276 8.2:-20708234 MS.gene49262:CDS
CAATATCTGTCGTCCTAGAG+GGG 0.655074 8.2:+20708109 None:intergenic
ATCGTCGCCGTTGATAAGGT+CGG 0.656137 8.2:+20709378 None:intergenic
AGGTAATTCATCACATAACG+AGG 0.663103 8.2:+20708248 None:intergenic
AGGGGACAAAGCTTCTAACT+GGG 0.663155 8.2:+20708127 None:intergenic
GGATGAGTTTGTGATTACTG+AGG 0.669005 8.2:-20708390 MS.gene49262:CDS
CAGAAAGCCGGTTATAACTG+GGG 0.674324 8.2:-20708285 MS.gene49262:CDS
ATACATCAAGTATGTACCGG+AGG 0.675429 8.2:-20707616 MS.gene49262:CDS
GGTATCACCGACCTTATCAA+CGG 0.676562 8.2:-20709385 MS.gene49262:CDS
TAGACTTCAGGATCATTCGG+AGG 0.689209 8.2:+20709226 None:intergenic
TTTCCAGCGGAATTAATCGG+CGG 0.697053 8.2:+20709151 None:intergenic
TTTGTGATTACTGAGGCGAA+GGG 0.701534 8.2:-20708383 MS.gene49262:CDS
CATACTGCCGTACCTGACCG+CGG 0.704323 8.2:+20707922 None:intergenic
CACCGGCTAACAGCATCCGG+CGG 0.709949 8.2:+20709028 None:intergenic
AATTGGGTTCGTAAGCGCCG+CGG 0.718269 8.2:-20707939 MS.gene49262:CDS
TGATTGACGAGAAGACTCGG+TGG 0.724015 8.2:+20709264 None:intergenic
CTGTTGATGAGATTATTCAG+TGG 0.751504 8.2:-20709195 MS.gene49262:CDS
TAAACCTCCCCATAAACGAG+CGG 0.756814 8.2:+20707670 None:intergenic
AGGTACGGCAGTATGCTACG+GGG 0.821280 8.2:-20707914 MS.gene49262:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATTAGATTTATTTGA+AGG - chr8.2:20709507-20709526 MS.gene49262:CDS 10.0%
!! ATTTGAAAGATATTATTGAT+CGG - chr8.2:20708263-20708282 MS.gene49262:CDS 15.0%
!!! TATCACTTTAAAAATGATTT+GGG - chr8.2:20708928-20708947 MS.gene49262:CDS 15.0%
!!! TTATCACTTTAAAAATGATT+TGG - chr8.2:20708927-20708946 MS.gene49262:CDS 15.0%
!!! TTCAAATTCAAAATTGATTC+AGG + chr8.2:20708250-20708269 None:intergenic 20.0%
! AAAAACCGGTAAGATTATAT+TGG - chr8.2:20707958-20707977 MS.gene49262:CDS 25.0%
!! GTTATGATGTTGTTGAATTT+TGG - chr8.2:20708571-20708590 MS.gene49262:CDS 25.0%
!!! GTGTTTTGAAGATATATACA+GGG - chr8.2:20709314-20709333 MS.gene49262:CDS 25.0%
!!! TGATGATTTGTTTGTTGATT+TGG - chr8.2:20708219-20708238 MS.gene49262:CDS 25.0%
AAATAGACTTCAGGATCATT+CGG + chr8.2:20707869-20707888 None:intergenic 30.0%
ACGATCCAATATAATCTTAC+CGG + chr8.2:20707966-20707985 None:intergenic 30.0%
ATATTATTGATCGGATGGTT+AGG - chr8.2:20708272-20708291 MS.gene49262:CDS 30.0%
CAAATACATCAAGTATGTAC+CGG - chr8.2:20709470-20709489 MS.gene49262:CDS 30.0%
GAAAGATATTATTGATCGGA+TGG - chr8.2:20708267-20708286 MS.gene49262:CDS 30.0%
GCGAATAAATATATCAGAGA+AGG - chr8.2:20709383-20709402 MS.gene49262:CDS 30.0%
TGTTTCAATGAAACAGCTAA+AGG - chr8.2:20708544-20708563 MS.gene49262:CDS 30.0%
! CACTTTAAAAATGATTTGGG+TGG - chr8.2:20708931-20708950 MS.gene49262:CDS 30.0%
! TAGGATTTTGGATATGTATG+AGG - chr8.2:20708636-20708655 MS.gene49262:CDS 30.0%
! TCAGATCTTATAGAGGTTTT+GGG - chr8.2:20709123-20709142 MS.gene49262:CDS 30.0%
!! TGAGAAATTGAGTATTGAAG+AGG - chr8.2:20708378-20708397 MS.gene49262:CDS 30.0%
!!! CGTGTTTTGAAGATATATAC+AGG - chr8.2:20709313-20709332 MS.gene49262:CDS 30.0%
AAAATCCTAAACAGCTTCTC+CGG + chr8.2:20708625-20708644 None:intergenic 35.0%
AAATAAGTCTCTAGATCCTC+CGG + chr8.2:20709492-20709511 None:intergenic 35.0%
AGAATTATCATCAAACCCAC+CGG + chr8.2:20708134-20708153 None:intergenic 35.0%
AGGTAATTCATCACATAACG+AGG + chr8.2:20708844-20708863 None:intergenic 35.0%
ATGTCTTCACGATCTTCTTT+GGG + chr8.2:20707647-20707666 None:intergenic 35.0%
ATTAATTCCGCTGGAAAAAC+CGG - chr8.2:20707944-20707963 MS.gene49262:CDS 35.0%
CTCTAATAATGCATCAAGGA+TGG - chr8.2:20709260-20709279 MS.gene49262:CDS 35.0%
CTGAGTTTGAGAGTTGTATT+CGG - chr8.2:20708770-20708789 MS.gene49262:CDS 35.0%
CTGCTGTATTACATCACATA+AGG - chr8.2:20709535-20709554 MS.gene49262:CDS 35.0%
CTTATGTGATGTAATACAGC+AGG + chr8.2:20709537-20709556 None:intergenic 35.0%
TGAATTGGAGGATATGGTTA+CGG - chr8.2:20708678-20708697 MS.gene49262:CDS 35.0%
TGATGAGATTATTCAGTGGA+TGG - chr8.2:20707898-20707917 MS.gene49262:CDS 35.0%
! AGGCTATGTGATAGTCTTTT+CGG - chr8.2:20708496-20708515 MS.gene49262:CDS 35.0%
! CAGATCTTATAGAGGTTTTG+GGG - chr8.2:20709124-20709143 MS.gene49262:CDS 35.0%
! CTCAGATCTTATAGAGGTTT+TGG - chr8.2:20709122-20709141 MS.gene49262:CDS 35.0%
! CTGTTGATGAGATTATTCAG+TGG - chr8.2:20707894-20707913 MS.gene49262:CDS 35.0%
! GTGGGTTTGATGATAATTCT+GGG - chr8.2:20708134-20708153 MS.gene49262:CDS 35.0%
! GTTTTTCCAGCGGAATTAAT+CGG + chr8.2:20707944-20707963 None:intergenic 35.0%
!! AGATCTTATAGAGGTTTTGG+GGG - chr8.2:20709125-20709144 MS.gene49262:CDS 35.0%
!! GATGATAATTCTGGGAGTTT+TGG - chr8.2:20708142-20708161 MS.gene49262:CDS 35.0%
!!! TTGTTAGGGTTTTGTTGAGT+GGG - chr8.2:20708467-20708486 MS.gene49262:CDS 35.0%
AACAATATCTGTCGTCCTAG+AGG + chr8.2:20708985-20709004 None:intergenic 40.0%
AAGCTGTTAAGGTCGTTGTT+AGG - chr8.2:20708452-20708471 MS.gene49262:CDS 40.0%
ACAATATCTGTCGTCCTAGA+GGG + chr8.2:20708984-20709003 None:intergenic 40.0%
AGCTGTTAAGGTCGTTGTTA+GGG - chr8.2:20708453-20708472 MS.gene49262:CDS 40.0%
AGTTGATTGACGAGAAGACT+CGG + chr8.2:20707831-20707850 None:intergenic 40.0%
ATACATCAAGTATGTACCGG+AGG - chr8.2:20709473-20709492 MS.gene49262:CDS 40.0%
CATGTCTTCACGATCTTCTT+TGG + chr8.2:20707648-20707667 None:intergenic 40.0%
GAAGGACTCAGATCTTATAG+AGG - chr8.2:20709116-20709135 MS.gene49262:CDS 40.0%
GAAGTTTGAGTGGAAGAGTT+TGG - chr8.2:20708405-20708424 MS.gene49262:CDS 40.0%
GAATTACCTGAAACTGCTTG+CGG - chr8.2:20708855-20708874 MS.gene49262:CDS 40.0%
GATGAACAATCTGCATTACC+TGG - chr8.2:20709083-20709102 MS.gene49262:CDS 40.0%
GATTTGTAATACTGTTCCGC+CGG - chr8.2:20708045-20708064 MS.gene49262:CDS 40.0%
GGATGAGAGGATGAAGAATT+GGG - chr8.2:20708426-20708445 MS.gene49262:CDS 40.0%
GGATGAGTTTGTGATTACTG+AGG - chr8.2:20708699-20708718 MS.gene49262:CDS 40.0%
GTAACCATATCCTCCAATTC+AGG + chr8.2:20708679-20708698 None:intergenic 40.0%
GTTGAGTGTTTGGCAATTCT+GGG - chr8.2:20708352-20708371 MS.gene49262:CDS 40.0%
TATAATCCGCAAGCAGTTTC+AGG + chr8.2:20708864-20708883 None:intergenic 40.0%
TCATGAAACCTATGAGAACC+AGG + chr8.2:20708181-20708200 None:intergenic 40.0%
TCCTCCTATTAGTACTACAC+CGG + chr8.2:20708081-20708100 None:intergenic 40.0%
TCTCATAGGTTTCATGAACG+TGG - chr8.2:20708184-20708203 MS.gene49262:CDS 40.0%
TGAACATCCCCAGTTATAAC+CGG + chr8.2:20708814-20708833 None:intergenic 40.0%
TGAACTTGAGCACAATCTTG+AGG - chr8.2:20709014-20709033 MS.gene49262:CDS 40.0%
TGGATGAGAGGATGAAGAAT+TGG - chr8.2:20708425-20708444 MS.gene49262:CDS 40.0%
TTAGCCGGTGTAGTACTAAT+AGG - chr8.2:20708074-20708093 MS.gene49262:CDS 40.0%
TTCATCACATAACGAGGCAA+AGG + chr8.2:20708838-20708857 None:intergenic 40.0%
TTTGCCTGAATTGGAGGATA+TGG - chr8.2:20708672-20708691 MS.gene49262:CDS 40.0%
TTTGTGATTACTGAGGCGAA+GGG - chr8.2:20708706-20708725 MS.gene49262:CDS 40.0%
! AAGCAGTTGCCATTTGTAAG+AGG - chr8.2:20708596-20708615 MS.gene49262:CDS 40.0%
! ACAGCGTTGAAATAGACTTC+AGG + chr8.2:20707878-20707897 None:intergenic 40.0%
! GGAGCTCTAATAATGCATCA+AGG - chr8.2:20709256-20709275 MS.gene49262:CDS 40.0%
! GGTGGGTTTGATGATAATTC+TGG - chr8.2:20708133-20708152 MS.gene49262:CDS 40.0%
! TGATAGTCTTTTCGGTGATC+TGG - chr8.2:20708504-20708523 MS.gene49262:CDS 40.0%
!! GATCTTCTTTGGGAGCTTTT+AGG + chr8.2:20707637-20707656 None:intergenic 40.0%
!! GCTTTTGGAAATCAGTGAAG+AGG - chr8.2:20708900-20708919 MS.gene49262:CDS 40.0%
!! GGAGAAGCTGTTTAGGATTT+TGG - chr8.2:20708624-20708643 MS.gene49262:CDS 40.0%
!!! AATCTTACCGGTTTTTCCAG+CGG + chr8.2:20707954-20707973 None:intergenic 40.0%
!!! AGAGGTTTTGGGGGATAATT+GGG - chr8.2:20709134-20709153 MS.gene49262:CDS 40.0%
!!! GTTGTTAGGGTTTTGTTGAG+TGG - chr8.2:20708466-20708485 MS.gene49262:CDS 40.0%
!!! TAGAGGTTTTGGGGGATAAT+TGG - chr8.2:20709133-20709152 MS.gene49262:CDS 40.0%
!!! TGTTAGGGTTTTGTTGAGTG+GGG - chr8.2:20708468-20708487 MS.gene49262:CDS 40.0%
AAAACACCTGCTGCAATGCA+TGG + chr8.2:20709062-20709081 None:intergenic 45.0%
AGATGCTTTGCCTGAATTGG+AGG - chr8.2:20708666-20708685 MS.gene49262:CDS 45.0%
AGGGGACAAAGCTTCTAACT+GGG + chr8.2:20708965-20708984 None:intergenic 45.0%
AGTGGAAGAGTTTGGATGAG+AGG - chr8.2:20708413-20708432 MS.gene49262:CDS 45.0%
ATGTCTTTCAGTTCGCAGGA+CGG - chr8.2:20708106-20708125 MS.gene49262:CDS 45.0%
ATTGATCGGATGGTTAGGTC+TGG - chr8.2:20708277-20708296 MS.gene49262:CDS 45.0%
CAATATCTGTCGTCCTAGAG+GGG + chr8.2:20708983-20709002 None:intergenic 45.0%
CAGAAAGCCGGTTATAACTG+GGG - chr8.2:20708804-20708823 MS.gene49262:CDS 45.0%
CCAGAAAGCCGGTTATAACT+GGG - chr8.2:20708803-20708822 MS.gene49262:CDS 45.0%
GAATGAGACTTCCAGAAAGC+CGG - chr8.2:20708792-20708811 MS.gene49262:CDS 45.0%
GAATTGGGTGCAAGCTGTTA+AGG - chr8.2:20708441-20708460 MS.gene49262:CDS 45.0%
GAGAGATGCTTTGCCTGAAT+TGG - chr8.2:20708663-20708682 MS.gene49262:CDS 45.0%
GGTATCACCGACCTTATCAA+CGG - chr8.2:20707704-20707723 MS.gene49262:CDS 45.0%
GGTTAGGTCTGGATATGAGA+GGG - chr8.2:20708288-20708307 MS.gene49262:CDS 45.0%
GGTTGAGTGTTTGGCAATTC+TGG - chr8.2:20708351-20708370 MS.gene49262:CDS 45.0%
GTCGTCGGATTTGGAAGATT+TGG + chr8.2:20707738-20707757 None:intergenic 45.0%
GTTTGTGATTACTGAGGCGA+AGG - chr8.2:20708705-20708724 MS.gene49262:CDS 45.0%
TAAACCTCCCCATAAACGAG+CGG + chr8.2:20709422-20709441 None:intergenic 45.0%
TAGACTTCAGGATCATTCGG+AGG + chr8.2:20707866-20707885 None:intergenic 45.0%
TATACAGGGTTCAGACAGCT+TGG - chr8.2:20709328-20709347 MS.gene49262:CDS 45.0%
TCCAGAAAGCCGGTTATAAC+TGG - chr8.2:20708802-20708821 MS.gene49262:CDS 45.0%
TCGTTTATGGGGAGGTTTAG+CGG - chr8.2:20709423-20709442 MS.gene49262:CDS 45.0%
TGGTTAGGTCTGGATATGAG+AGG - chr8.2:20708287-20708306 MS.gene49262:CDS 45.0%
TTACCTGGTGCGTAAAGTGA+AGG - chr8.2:20709098-20709117 MS.gene49262:CDS 45.0%
TTCATCCCTCAAACAAGCCA+AGG + chr8.2:20709226-20709245 None:intergenic 45.0%
TTCGATGTCTTTCAGTTCGC+AGG - chr8.2:20708102-20708121 MS.gene49262:CDS 45.0%
TTTCCAGCGGAATTAATCGG+CGG + chr8.2:20707941-20707960 None:intergenic 45.0%
! AAGAGGTGCAGAAGTTTGAG+TGG - chr8.2:20708395-20708414 MS.gene49262:CDS 45.0%
! CATGAACGTGGTGTTAGTCT+TGG - chr8.2:20708196-20708215 MS.gene49262:CDS 45.0%
! CGATGCTATGGATTCGCTTT+TGG - chr8.2:20708885-20708904 MS.gene49262:CDS 45.0%
! GTTGATAAGGTCGGTGATAC+CGG + chr8.2:20707705-20707724 None:intergenic 45.0%
! TAGTCTTTTCGGTGATCTGG+AGG - chr8.2:20708507-20708526 MS.gene49262:CDS 45.0%
! TGCGGATTATAGCGATGCTA+TGG - chr8.2:20708873-20708892 MS.gene49262:CDS 45.0%
! TGGGAGCTTTTAGGCTTTTG+AGG + chr8.2:20707628-20707647 None:intergenic 45.0%
! TTAGAAGCTTTGTCCCCTCT+AGG - chr8.2:20708967-20708986 MS.gene49262:CDS 45.0%
! TTTTGTTGAGTGGGGAGAAG+AGG - chr8.2:20708476-20708495 MS.gene49262:CDS 45.0%
!! ATATGAGAGGGAGTGTTTGC+AGG - chr8.2:20708300-20708319 MS.gene49262:CDS 45.0%
!! TGCATCAAGGATGGCTTTGA+AGG - chr8.2:20709269-20709288 MS.gene49262:CDS 45.0%
!! TGGCTTGTTTGAGGGATGAA+GGG - chr8.2:20709226-20709245 MS.gene49262:CDS 45.0%
!! TTGGCTTGTTTGAGGGATGA+AGG - chr8.2:20709225-20709244 MS.gene49262:CDS 45.0%
!!! TCTGGGAGTTTTGGTGATGT+GGG - chr8.2:20708151-20708170 MS.gene49262:CDS 45.0%
!!! TTCTGGGAGTTTTGGTGATG+TGG - chr8.2:20708150-20708169 MS.gene49262:CDS 45.0%
ACCTGCATACCGCTCGTTTA+TGG - chr8.2:20709410-20709429 MS.gene49262:CDS 50.0%
AGGGTGTGCTTAGAGGACTT+GGG - chr8.2:20708725-20708744 MS.gene49262:CDS 50.0%
AGTCCTTCACTTTACGCACC+AGG + chr8.2:20709104-20709123 None:intergenic 50.0%
CCTGCATACCGCTCGTTTAT+GGG - chr8.2:20709411-20709430 MS.gene49262:CDS 50.0%
CTCTTCACGAAGCTGGTCAT+CGG + chr8.2:20709361-20709380 None:intergenic 50.0%
CTGCATACCGCTCGTTTATG+GGG - chr8.2:20709412-20709431 MS.gene49262:CDS 50.0%
CTTTCTCCGCAGCTTCGAAT+CGG + chr8.2:20707781-20707800 None:intergenic 50.0%
GAGGGGACAAAGCTTCTAAC+TGG + chr8.2:20708966-20708985 None:intergenic 50.0%
GCCGGTGTAGTACTAATAGG+AGG - chr8.2:20708077-20708096 MS.gene49262:CDS 50.0%
TCAGGTACGGCAGTATGCTA+CGG - chr8.2:20709173-20709192 MS.gene49262:CDS 50.0%
TCTTCACGAAGCTGGTCATC+GGG + chr8.2:20709360-20709379 None:intergenic 50.0%
TGATTGACGAGAAGACTCGG+TGG + chr8.2:20707828-20707847 None:intergenic 50.0%
TGGAATCGTCGCCGTTGATA+AGG + chr8.2:20707718-20707737 None:intergenic 50.0%
TGTTTGAGGGATGAAGGGGT+TGG - chr8.2:20709231-20709250 MS.gene49262:CDS 50.0%
TTCGCATCTCTTCACGAAGC+TGG + chr8.2:20709368-20709387 None:intergenic 50.0%
! AAGGGTGTGCTTAGAGGACT+TGG - chr8.2:20708724-20708743 MS.gene49262:CDS 50.0%
! ATCGTCGCCGTTGATAAGGT+CGG + chr8.2:20707714-20707733 None:intergenic 50.0%
! CCCAGTTATAACCGGCTTTC+TGG + chr8.2:20708806-20708825 None:intergenic 50.0%
! GGCTTGTTTGAGGGATGAAG+GGG - chr8.2:20709227-20709246 MS.gene49262:CDS 50.0%
! TGCCATTTGTAAGAGGTCGC+CGG - chr8.2:20708603-20708622 MS.gene49262:CDS 50.0%
! TGGGTGATCCTGGTTCTCAT+AGG - chr8.2:20708170-20708189 MS.gene49262:CDS 50.0%
!! CAAGGCCTTGGCTTGTTTGA+GGG - chr8.2:20709218-20709237 MS.gene49262:CDS 50.0%
!! TGACGCGTTGGTTGAGTGTT+TGG - chr8.2:20708342-20708361 MS.gene49262:CDS 50.0%
!! TTTGGTGATGTGGGTGATCC+TGG - chr8.2:20708160-20708179 MS.gene49262:CDS 50.0%
ACCTTCGACAACCGTCTCTC+CGG - chr8.2:20707683-20707702 MS.gene49262:CDS 55.0%
AGGTACGGCAGTATGCTACG+GGG - chr8.2:20709175-20709194 MS.gene49262:CDS 55.0%
AGGTTTAGCGGTCAGCTGGA+GGG - chr8.2:20709435-20709454 MS.gene49262:CDS 55.0%
CAGGGTTCAGACAGCTTGGA+AGG - chr8.2:20709332-20709351 MS.gene49262:CDS 55.0%
CAGGTACGGCAGTATGCTAC+GGG - chr8.2:20709174-20709193 MS.gene49262:CDS 55.0%
CATACCGCTCGTTTATGGGG+AGG - chr8.2:20709415-20709434 MS.gene49262:CDS 55.0%
CCCATAAACGAGCGGTATGC+AGG + chr8.2:20709414-20709433 None:intergenic 55.0%
CCTTAGAGCCTGTTGGAGCA+AGG - chr8.2:20709200-20709219 MS.gene49262:CDS 55.0%
CCTTGCTCCAACAGGCTCTA+AGG + chr8.2:20709203-20709222 None:intergenic 55.0%
CGAAGACCATGCATTGCAGC+AGG - chr8.2:20709053-20709072 MS.gene49262:CDS 55.0%
CGATCCAAGTTGCCATGTCG+AGG - chr8.2:20707996-20708015 MS.gene49262:CDS 55.0%
CTCCGGCGACCTCTTACAAA+TGG + chr8.2:20708608-20708627 None:intergenic 55.0%
GACTTGGGGAGGCTGTGAAA+GGG - chr8.2:20708740-20708759 MS.gene49262:CDS 55.0%
GAGAACTCGATCGTCTCCAC+CGG + chr8.2:20707588-20707607 None:intergenic 55.0%
GGGTGTGCTTAGAGGACTTG+GGG - chr8.2:20708726-20708745 MS.gene49262:CDS 55.0%
TGAGGGATGAAGGGGTTGGA+GGG - chr8.2:20709235-20709254 MS.gene49262:CDS 55.0%
TGTGCTTAGAGGACTTGGGG+AGG - chr8.2:20708729-20708748 MS.gene49262:CDS 55.0%
TTGAGGGATGAAGGGGTTGG+AGG - chr8.2:20709234-20709253 MS.gene49262:CDS 55.0%
! AATTGGGTTCGTAAGCGCCG+CGG - chr8.2:20709150-20709169 MS.gene49262:CDS 55.0%
! CTACACCGGCTAACAGCATC+CGG + chr8.2:20708067-20708086 None:intergenic 55.0%
!! CCTTGACCGATTCGAAGCTG+CGG - chr8.2:20707772-20707791 MS.gene49262:CDS 55.0%
!! GCAAGGCCTTGGCTTGTTTG+AGG - chr8.2:20709217-20709236 MS.gene49262:CDS 55.0%
ACCGGAGAGACGGTTGTCGA+AGG + chr8.2:20707687-20707706 None:intergenic 60.0%
AGCCAAGGCCTTGCTCCAAC+AGG + chr8.2:20709211-20709230 None:intergenic 60.0%
AGCCTGTTGGAGCAAGGCCT+TGG - chr8.2:20709206-20709225 MS.gene49262:CDS 60.0%
AGTTGCCATGTCGAGGCTCG+AGG - chr8.2:20708003-20708022 MS.gene49262:CDS 60.0%
CAGCTGGAGGGAAGACATGC+AGG - chr8.2:20709447-20709466 MS.gene49262:CDS 60.0%
CATACTGCCGTACCTGACCG+CGG + chr8.2:20709170-20709189 None:intergenic 60.0%
CCGCAGCTTCGAATCGGTCA+AGG + chr8.2:20707775-20707794 None:intergenic 60.0%
CGAGCCTCGACATGGCAACT+TGG + chr8.2:20708003-20708022 None:intergenic 60.0%
CTCATCCTCGAGCCTCGACA+TGG + chr8.2:20708011-20708030 None:intergenic 60.0%
GAGGTTTAGCGGTCAGCTGG+AGG - chr8.2:20709434-20709453 MS.gene49262:CDS 60.0%
GGACTTGGGGAGGCTGTGAA+AGG - chr8.2:20708739-20708758 MS.gene49262:CDS 60.0%
GGAGAGACGGTTGTCGAAGG+TGG + chr8.2:20707684-20707703 None:intergenic 60.0%
GGTCGCCGGAGAAGCTGTTT+AGG - chr8.2:20708617-20708636 MS.gene49262:CDS 60.0%
GGTCGGTGATACCGGAGAGA+CGG + chr8.2:20707697-20707716 None:intergenic 60.0%
GTCGTCGTCGTCGTCGGATT+TGG + chr8.2:20707747-20707766 None:intergenic 60.0%
GTCTTCGTCGTCGTCGTCGT+CGG + chr8.2:20707753-20707772 None:intergenic 60.0%
TAGCGTTCGTCGTGACGCGT+TGG - chr8.2:20708330-20708349 MS.gene49262:CDS 60.0%
TTCAGTTCGCAGGACGGTGC+CGG - chr8.2:20708112-20708131 MS.gene49262:CDS 60.0%
TTCCGCCGGATGCTGTTAGC+CGG - chr8.2:20708059-20708078 MS.gene49262:CDS 60.0%
! CGGGGTACCTTAGAGCCTGT+TGG - chr8.2:20709193-20709212 MS.gene49262:CDS 60.0%
! GAGGCGAAGGGTGTGCTTAG+AGG - chr8.2:20708718-20708737 MS.gene49262:CDS 60.0%
! TCGCCGCCGATTAATTCCGC+TGG - chr8.2:20707935-20707954 MS.gene49262:CDS 60.0%
GGGGAGGTTTAGCGGTCAGC+TGG - chr8.2:20709431-20709450 MS.gene49262:CDS 65.0%
TCGATCGTCTCCACCGGCAC+CGG + chr8.2:20707582-20707601 None:intergenic 65.0%
! CACCGGCTAACAGCATCCGG+CGG + chr8.2:20708064-20708083 None:intergenic 65.0%
! GTAAGCGCCGCGGTCAGGTA+CGG - chr8.2:20709160-20709179 MS.gene49262:CDS 65.0%
ACCACCACCAACCACGGCGG+CGG - chr8.2:20707548-20707567 MS.gene49262:CDS 70.0%
GCCACCACCACCAACCACGG+CGG - chr8.2:20707545-20707564 MS.gene49262:CDS 70.0%
GCCGCCACCACCACCAACCA+CGG - chr8.2:20707542-20707561 MS.gene49262:CDS 70.0%
! AGTTCGCAGGACGGTGCCGG+TGG - chr8.2:20708115-20708134 MS.gene49262:CDS 70.0%
! ATCGTCTCCACCGGCACCGG+TGG + chr8.2:20707579-20707598 None:intergenic 70.0%
! GGTTCGTAAGCGCCGCGGTC+AGG - chr8.2:20709155-20709174 MS.gene49262:CDS 70.0%
!! GCCGTGGTTGGTGGTGGTGG+CGG + chr8.2:20707546-20707565 None:intergenic 70.0%
!! GTTCGCAGGACGGTGCCGGT+GGG - chr8.2:20708116-20708135 MS.gene49262:CDS 70.0%
ACCACCAACCACGGCGGCGG+CGG - chr8.2:20707551-20707570 MS.gene49262:CDS 75.0%
!! GCCGCCGTGGTTGGTGGTGG+TGG + chr8.2:20707549-20707568 None:intergenic 75.0%
! TCCGCCGCCGCCGTGGTTGG+TGG + chr8.2:20707555-20707574 None:intergenic 80.0%
!!! GCCGCCGCCGTGGTTGGTGG+TGG + chr8.2:20707552-20707571 None:intergenic 80.0%
! CACGGCGGCGGCGGAGCCAC+CGG - chr8.2:20707560-20707579 MS.gene49262:CDS 85.0%
! GGCGGCGGAGCCACCGGTGC+CGG - chr8.2:20707566-20707585 MS.gene49262:CDS 85.0%
! GGCTCCGCCGCCGCCGTGGT+TGG + chr8.2:20707558-20707577 None:intergenic 85.0%
!! GGCGGAGCCACCGGTGCCGG+TGG - chr8.2:20707569-20707588 MS.gene49262:CDS 85.0%
! CGGTGGCTCCGCCGCCGCCG+TGG + chr8.2:20707562-20707581 None:intergenic 90.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 20707539 20709572 20707539 ID=MS.gene49262
chr8.2 mRNA 20707539 20709572 20707539 ID=MS.gene49262.t1;Parent=MS.gene49262
chr8.2 exon 20707539 20709572 20707539 ID=MS.gene49262.t1.exon1;Parent=MS.gene49262.t1
chr8.2 CDS 20707539 20709572 20707539 ID=cds.MS.gene49262.t1;Parent=MS.gene49262.t1
Gene Sequence

>MS.gene49262

ATGGCCGCCACCACCACCAACCACGGCGGCGGCGGAGCCACCGGTGCCGGTGGAGACGATCGAGTTCTCGCTACAGCACAACAGATCCTCAAAAGCCTAAAAGCTCCCAAAGAAGATCGTGAAGACATGCTCTTAATCTTCTCCACCTTCGACAACCGTCTCTCCGGTATCACCGACCTTATCAACGGCGACGATTCCAAATCTTCCAAATCCGACGACGACGACGACGAAGACCTTGACCGATTCGAAGCTGCGGAGAAAGTCATACTCAATGATTCTTCGTTATCCACCGAGTCTTCTCGTCAATCAACTTCGCTTTTCGATCCTCCGAATGATCCTGAAGTCTATTTCAACGCTGTTGATGAGATTATTCAGTGGATGGAACACTTCACGATCTCGCCGCCGATTAATTCCGCTGGAAAAACCGGTAAGATTATATTGGATCGTGCTGATAACGCGATCCAAGTTGCCATGTCGAGGCTCGAGGATGAGCTTCGACATGTGTTGATTTGTAATACTGTTCCGCCGGATGCTGTTAGCCGGTGTAGTACTAATAGGAGGAGTTCGATGTCTTTCAGTTCGCAGGACGGTGCCGGTGGGTTTGATGATAATTCTGGGAGTTTTGGTGATGTGGGTGATCCTGGTTCTCATAGGTTTCATGAACGTGGTGTTAGTCTTGGTGATGATTTGTTTGTTGATTTGGTTCGTCCTGAATCAATTTTGAATTTGAAAGATATTATTGATCGGATGGTTAGGTCTGGATATGAGAGGGAGTGTTTGCAGGTTTATAGTAGCGTTCGTCGTGACGCGTTGGTTGAGTGTTTGGCAATTCTGGGAGTTGAGAAATTGAGTATTGAAGAGGTGCAGAAGTTTGAGTGGAAGAGTTTGGATGAGAGGATGAAGAATTGGGTGCAAGCTGTTAAGGTCGTTGTTAGGGTTTTGTTGAGTGGGGAGAAGAGGCTATGTGATAGTCTTTTCGGTGATCTGGAGGATGTGAAAGAGATGTGTTTCAATGAAACAGCTAAAGGTTGTGTTATGATGTTGTTGAATTTTGGCGAAGCAGTTGCCATTTGTAAGAGGTCGCCGGAGAAGCTGTTTAGGATTTTGGATATGTATGAGGTTCTGAGAGATGCTTTGCCTGAATTGGAGGATATGGTTACGGATGAGTTTGTGATTACTGAGGCGAAGGGTGTGCTTAGAGGACTTGGGGAGGCTGTGAAAGGGACGTTTGCTGAGTTTGAGAGTTGTATTCGGAATGAGACTTCCAGAAAGCCGGTTATAACTGGGGATGTTCATCCTTTGCCTCGTTATGTGATGAATTACCTGAAACTGCTTGCGGATTATAGCGATGCTATGGATTCGCTTTTGGAAATCAGTGAAGAGGCTCTTTATCACTTTAAAAATGATTTGGGTGGTGATGAGTCCCAGTTAGAAGCTTTGTCCCCTCTAGGACGACAGATATTGTTGTTGATGTCTGAACTTGAGCACAATCTTGAGGAAAAATCAAAACTTTACGAAGACCATGCATTGCAGCAGGTGTTTTTGATGAACAATCTGCATTACCTGGTGCGTAAAGTGAAGGACTCAGATCTTATAGAGGTTTTGGGGGATAATTGGGTTCGTAAGCGCCGCGGTCAGGTACGGCAGTATGCTACGGGGTACCTTAGAGCCTGTTGGAGCAAGGCCTTGGCTTGTTTGAGGGATGAAGGGGTTGGAGGGAGCTCTAATAATGCATCAAGGATGGCTTTGAAGGAGAGATTCAAGAATTTCAACGCGTGTTTTGAAGATATATACAGGGTTCAGACAGCTTGGAAGGTACCCGATGACCAGCTTCGTGAAGAGATGCGAATAAATATATCAGAGAAGGTGATACCTGCATACCGCTCGTTTATGGGGAGGTTTAGCGGTCAGCTGGAGGGAAGACATGCAGGCAAATACATCAAGTATGTACCGGAGGATCTAGAGACTTATTTATTAGATTTATTTGAAGGATCACCTGCTGTATTACATCACATAAGGAGAAAGAGTACATAG
Protein sequence

>MS.gene49262.t1

MAATTTNHGGGGATGAGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSKSDDDDDEDLDRFEAAEKVILNDSSLSTESSRQSTSLFDPPNDPEVYFNAVDEIIQWMEHFTISPPINSAGKTGKIILDRADNAIQVAMSRLEDELRHVLICNTVPPDAVSRCSTNRRSSMSFSSQDGAGGFDDNSGSFGDVGDPGSHRFHERGVSLGDDLFVDLVRPESILNLKDIIDRMVRSGYERECLQVYSSVRRDALVECLAILGVEKLSIEEVQKFEWKSLDERMKNWVQAVKVVVRVLLSGEKRLCDSLFGDLEDVKEMCFNETAKGCVMMLLNFGEAVAICKRSPEKLFRILDMYEVLRDALPELEDMVTDEFVITEAKGVLRGLGEAVKGTFAEFESCIRNETSRKPVITGDVHPLPRYVMNYLKLLADYSDAMDSLLEISEEALYHFKNDLGGDESQLEALSPLGRQILLLMSELEHNLEEKSKLYEDHALQQVFLMNNLHYLVRKVKDSDLIEVLGDNWVRKRRGQVRQYATGYLRACWSKALACLRDEGVGGSSNNASRMALKERFKNFNACFEDIYRVQTAWKVPDDQLREEMRINISEKVIPAYRSFMGRFSGQLEGRHAGKYIKYVPEDLETYLLDLFEGSPAVLHHIRRKST