Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49476.t1 | XP_003610733.1 | 97.4 | 270 | 7 | 0 | 1 | 270 | 1 | 270 | 1.50E-119 | 439.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49476.t1 | G7K3N8 | 97.4 | 270 | 7 | 0 | 1 | 270 | 1 | 270 | 1.1e-119 | 439.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050228 | MS.gene49476 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene050330 | MS.gene49476 | -0.819912 | 9.05E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene49476 | 0.818621 | 1.78E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene49476 | 0.824066 | 9.87E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene49476 | 0.803904 | 2.79E-49 | -1.69E-46 |
| MS.gene050987 | MS.gene49476 | 0.804079 | 2.57E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene49476 | 0.860472 | 2.02E-63 | -1.69E-46 |
| MS.gene052302 | MS.gene49476 | 0.856848 | 2.44E-62 | -1.69E-46 |
| MS.gene052309 | MS.gene49476 | -0.805185 | 1.51E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene49476 | -0.836055 | 1.17E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene49476 | 0.847206 | 1.34E-59 | -1.69E-46 |
| MS.gene053630 | MS.gene49476 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene49476 | 0.80951 | 1.83E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene49476 | -0.829691 | 4.47E-55 | -1.69E-46 |
| MS.gene056760 | MS.gene49476 | 0.820195 | 7.80E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene49476 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene49476 | 0.830123 | 3.51E-55 | -1.69E-46 |
| MS.gene058906 | MS.gene49476 | 0.833951 | 3.97E-56 | -1.69E-46 |
| MS.gene060619 | MS.gene49476 | 0.815629 | 8.38E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene49476 | -0.827738 | 1.33E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49476.t1 | MTR_5g006410 | 98.519 | 270 | 4 | 0 | 1 | 270 | 1 | 270 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49476.t1 | AT1G05430 | 31.387 | 274 | 164 | 8 | 4 | 265 | 2 | 263 | 3.19e-29 | 112 |
Find 48 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTATCGCCATCTTAATTT+AGG | 0.173715 | 5.1:+1202111 | None:intergenic |
| GAGGGTTTGTTTGGGGTATT+AGG | 0.225102 | 5.1:+1200844 | None:intergenic |
| TGATGAATTTAGTACCCTTT+TGG | 0.283432 | 5.1:+1205920 | None:intergenic |
| TCTTAATTTAGGAGTATTAG+AGG | 0.336101 | 5.1:+1202122 | None:intergenic |
| TGAAGAATGTTTACCTCATC+AGG | 0.361386 | 5.1:+1205506 | None:intergenic |
| TGCGTCCCTGAGGGTTTGTT+TGG | 0.366836 | 5.1:+1200835 | None:intergenic |
| GCCTGCGGCGATGTCTTCTA+TGG | 0.378327 | 5.1:+1200803 | None:intergenic |
| AATACTTACAAAACTTTGCT+TGG | 0.388586 | 5.1:+1201921 | None:intergenic |
| GCGTCCCTGAGGGTTTGTTT+GGG | 0.396216 | 5.1:+1200836 | None:intergenic |
| TTTAGCGATAATGTAATCAA+TGG | 0.410793 | 5.1:-1202081 | MS.gene49476:CDS |
| AACAACTTCTCATTTCCAAA+AGG | 0.412565 | 5.1:-1205935 | MS.gene49476:CDS |
| TGCAGATCACATTCTTTCAC+TGG | 0.418252 | 5.1:-1204434 | MS.gene49476:CDS |
| AAAATATCACTGACAGCAAA+AGG | 0.445126 | 5.1:-1201957 | MS.gene49476:CDS |
| ATAATGTAATCAATGGAAAC+AGG | 0.449619 | 5.1:-1202074 | MS.gene49476:CDS |
| AATTTCTCTCACCTGCTGTA+AGG | 0.454722 | 5.1:+1204586 | None:intergenic |
| TCGGGTGCTGCTGCATGGAC+AGG | 0.461240 | 5.1:-1205434 | MS.gene49476:intron |
| GGATGAAAATTCTCCTCCAT+TGG | 0.471764 | 5.1:+1200865 | None:intergenic |
| ACAACTTCTCATTTCCAAAA+GGG | 0.495370 | 5.1:-1205934 | MS.gene49476:intron |
| CTAATACTCCTAAATTAAGA+TGG | 0.499414 | 5.1:-1202119 | MS.gene49476:CDS |
| AAATATCCTCAGTCCACAAA+AGG | 0.500662 | 5.1:+1204477 | None:intergenic |
| TTGTTTCGGGTGCTGCTGCA+TGG | 0.518260 | 5.1:-1205439 | MS.gene49476:CDS |
| TTTCAAGTTAACCTTACAGC+AGG | 0.521889 | 5.1:-1204597 | MS.gene49476:intron |
| TTCTAAGGAATCAGAAGCAT+AGG | 0.525547 | 5.1:+1201999 | None:intergenic |
| AATACCCCAAACAAACCCTC+AGG | 0.526762 | 5.1:-1200841 | MS.gene49476:CDS |
| GAAGACATCGCCGCAGGCAT+CGG | 0.526824 | 5.1:-1200798 | MS.gene49476:CDS |
| GCCATAGAAGACATCGCCGC+AGG | 0.530887 | 5.1:-1200804 | MS.gene49476:CDS |
| CTGCATGCTCTGAGTTTGAA+AGG | 0.533189 | 5.1:+1200758 | None:intergenic |
| CGTCCCTGAGGGTTTGTTTG+GGG | 0.534007 | 5.1:+1200837 | None:intergenic |
| ACGGCAGTAACTGGGAGACT+TGG | 0.544989 | 5.1:-1204627 | MS.gene49476:intron |
| GATATAAGCTTCATTAGCGA+AGG | 0.548786 | 5.1:+1202183 | None:intergenic |
| GCAGATAAATCCTGGTTCTG+AGG | 0.555456 | 5.1:-1200935 | MS.gene49476:intron |
| GTTCCTTTACGGCAGTAACT+GGG | 0.559706 | 5.1:-1204635 | MS.gene49476:intron |
| CCTCGATGATGCGTCCCTGA+GGG | 0.567429 | 5.1:+1200826 | None:intergenic |
| GTGATCTGCAGAAGAATACA+AGG | 0.587623 | 5.1:+1204447 | None:intergenic |
| TGGTTATGGTGCTCCAATGG+AGG | 0.595398 | 5.1:-1200878 | MS.gene49476:CDS |
| TCTGACAAAACCTCAGAACC+AGG | 0.596645 | 5.1:+1200925 | None:intergenic |
| GGCAAAATTGACACCTGATG+AGG | 0.610013 | 5.1:-1205519 | MS.gene49476:CDS |
| GACAGCAAAAGGACAACTCG+TGG | 0.611480 | 5.1:-1201946 | MS.gene49476:CDS |
| TCATTAGCGAAGGATCATGT+TGG | 0.611969 | 5.1:+1202193 | None:intergenic |
| GCCTCGATGATGCGTCCCTG+AGG | 0.614960 | 5.1:+1200825 | None:intergenic |
| GATCACATTCTTTCACTGGA+CGG | 0.618350 | 5.1:-1204430 | MS.gene49476:CDS |
| GACTCATATAATAAATCACA+AGG | 0.621123 | 5.1:-1202039 | MS.gene49476:CDS |
| GGACGGCAGTACATTACAGA+AGG | 0.634546 | 5.1:-1204413 | MS.gene49476:CDS |
| ATACCCCAAACAAACCCTCA+GGG | 0.654193 | 5.1:-1200840 | MS.gene49476:CDS |
| ACAGCAAAAGGACAACTCGT+GGG | 0.685849 | 5.1:-1201945 | MS.gene49476:CDS |
| CCCTCAGGGACGCATCATCG+AGG | 0.697140 | 5.1:-1200826 | MS.gene49476:CDS |
| GATCACGCATCCGATGCCTG+CGG | 0.699911 | 5.1:+1200788 | None:intergenic |
| AATCAATGGAAACAGGACAC+AGG | 0.700672 | 5.1:-1202067 | MS.gene49476:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTGTATATTAAAATAAAA+TGG | + | chr5.1:1203590-1203609 | None:intergenic | 10.0% |
| !! | ATTATAATATAAGTCATAAA+AGG | - | chr5.1:1204171-1204190 | MS.gene49476:intron | 10.0% |
| !! | ATTTAAGTAACAATATATAT+AGG | + | chr5.1:1203524-1203543 | None:intergenic | 10.0% |
| !! | AATAATTATTCTTTGTTAGT+AGG | - | chr5.1:1202849-1202868 | MS.gene49476:intron | 15.0% |
| !! | ATTAAAATGATGAATTACAA+TGG | - | chr5.1:1205696-1205715 | MS.gene49476:intron | 15.0% |
| !! | CAAATAGAATAAAGTTAAAT+TGG | + | chr5.1:1201049-1201068 | None:intergenic | 15.0% |
| !! | GAAATAAGATTAATTGTAAA+AGG | + | chr5.1:1201331-1201350 | None:intergenic | 15.0% |
| !! | TTAAAATGATGAATTACAAT+GGG | - | chr5.1:1205697-1205716 | MS.gene49476:intron | 15.0% |
| !!! | AAAAACAGCTTATATTTTAT+AGG | - | chr5.1:1201020-1201039 | MS.gene49476:intron | 15.0% |
| !!! | GTACTTTATTTTTATACAAT+TGG | + | chr5.1:1205250-1205269 | None:intergenic | 15.0% |
| !!! | TAAAGTTTTATATTTTACGT+AGG | - | chr5.1:1203625-1203644 | MS.gene49476:intron | 15.0% |
| !!! | TATATCTAAGCATTTTTATT+CGG | - | chr5.1:1204547-1204566 | MS.gene49476:intron | 15.0% |
| !! | AAGTTTAGTAAGAAATGAAA+TGG | - | chr5.1:1205175-1205194 | MS.gene49476:intron | 20.0% |
| !! | AATTATGTAGATACTTTAGA+TGG | - | chr5.1:1204863-1204882 | MS.gene49476:intron | 20.0% |
| !! | AATTATTGAAAATCTTGTCA+AGG | + | chr5.1:1205581-1205600 | None:intergenic | 20.0% |
| !! | ACTAATTTAAGAGTAAGTAT+AGG | + | chr5.1:1204828-1204847 | None:intergenic | 20.0% |
| !! | AGAATTAGAATGTTAATCTT+GGG | - | chr5.1:1205503-1205522 | MS.gene49476:CDS | 20.0% |
| !! | ATTATAATTGCGAAATAGTT+AGG | + | chr5.1:1205121-1205140 | None:intergenic | 20.0% |
| !! | ATTATGTAGATACTTTAGAT+GGG | - | chr5.1:1204864-1204883 | MS.gene49476:intron | 20.0% |
| !! | CATTATCGCTAAAAAAATTA+CGG | + | chr5.1:1204625-1204644 | None:intergenic | 20.0% |
| !! | CTAATTTAAGAGTAAGTATA+GGG | + | chr5.1:1204827-1204846 | None:intergenic | 20.0% |
| !! | GATTTAGTGTATAACTAATA+AGG | - | chr5.1:1203900-1203919 | MS.gene49476:intron | 20.0% |
| !! | TAACAATTAGAATATAACAG+TGG | + | chr5.1:1204015-1204034 | None:intergenic | 20.0% |
| !! | TCATTTCTTACTAAACTTAA+TGG | + | chr5.1:1205173-1205192 | None:intergenic | 20.0% |
| !! | TGAATTTAAGAGATAAGTAT+TGG | + | chr5.1:1201673-1201692 | None:intergenic | 20.0% |
| !!! | AAATTTGGTTAATGTCATTT+TGG | - | chr5.1:1204080-1204099 | MS.gene49476:intron | 20.0% |
| !!! | ATGCTATCAGATTTTATATT+GGG | + | chr5.1:1203107-1203126 | None:intergenic | 20.0% |
| !!! | TAATAAGGATTTGATAATAG+TGG | - | chr5.1:1203915-1203934 | MS.gene49476:intron | 20.0% |
| !!! | TACAATTAATCTTATTTCCA+TGG | - | chr5.1:1201333-1201352 | MS.gene49476:intron | 20.0% |
| !!! | TTCTTTTGTATGATGTTTTT+TGG | - | chr5.1:1205722-1205741 | MS.gene49476:intron | 20.0% |
| !!! | TTGACAAGATTTTCAATAAT+TGG | - | chr5.1:1205580-1205599 | MS.gene49476:intron | 20.0% |
| !!! | TTTGAAATCTAAGTTCAATT+TGG | - | chr5.1:1204146-1204165 | MS.gene49476:intron | 20.0% |
| ! | AAAACAACAAACATGAAGAA+TGG | + | chr5.1:1202195-1202214 | None:intergenic | 25.0% |
| ! | AAATTCTTGTGTGAAAAACT+AGG | - | chr5.1:1205632-1205651 | MS.gene49476:intron | 25.0% |
| ! | AAGATACAAAATGCAATAAC+CGG | + | chr5.1:1201471-1201490 | None:intergenic | 25.0% |
| ! | AATACTTACAAAACTTTGCT+TGG | + | chr5.1:1204795-1204814 | None:intergenic | 25.0% |
| ! | ACAAAAGATAGGAATGTAAT+TGG | + | chr5.1:1204042-1204061 | None:intergenic | 25.0% |
| ! | AGAAATTAGAAACAAAACAG+TGG | + | chr5.1:1200833-1200852 | None:intergenic | 25.0% |
| ! | AGGAAAAGAAATCAACTATA+TGG | + | chr5.1:1202016-1202035 | None:intergenic | 25.0% |
| ! | ATAATGTAATCAATGGAAAC+AGG | - | chr5.1:1204639-1204658 | MS.gene49476:intron | 25.0% |
| ! | CAATATAAAATCTGATAGCA+TGG | - | chr5.1:1203106-1203125 | MS.gene49476:intron | 25.0% |
| ! | CACAAAACTAAACAAAAGAT+AGG | + | chr5.1:1204053-1204072 | None:intergenic | 25.0% |
| ! | CATACTCAAATATGATAAGA+AGG | + | chr5.1:1200907-1200926 | None:intergenic | 25.0% |
| ! | CCACAAAAATAAAACTACAA+TGG | - | chr5.1:1202647-1202666 | MS.gene49476:intron | 25.0% |
| ! | CTAATACTCCTAAATTAAGA+TGG | - | chr5.1:1204594-1204613 | MS.gene49476:intron | 25.0% |
| ! | GAAAATGAATTCATTTCCTA+TGG | - | chr5.1:1204393-1204412 | MS.gene49476:intron | 25.0% |
| ! | GACATTAACCAAATTTCAAA+AGG | + | chr5.1:1204076-1204095 | None:intergenic | 25.0% |
| ! | GACTCATATAATAAATCACA+AGG | - | chr5.1:1204674-1204693 | MS.gene49476:intron | 25.0% |
| ! | GAGAATTAGAATGTTAATCT+TGG | - | chr5.1:1205502-1205521 | MS.gene49476:CDS | 25.0% |
| ! | GTAGTTTATGTAAATCTAAC+TGG | - | chr5.1:1201401-1201420 | MS.gene49476:intron | 25.0% |
| ! | TAAAACAATATGCAGAAAGT+AGG | + | chr5.1:1204424-1204443 | None:intergenic | 25.0% |
| ! | TAAATTCATCCACTTTAAGT+TGG | - | chr5.1:1201685-1201704 | MS.gene49476:intron | 25.0% |
| ! | TCAGAGAAAATGATAGTAAT+TGG | + | chr5.1:1202400-1202419 | None:intergenic | 25.0% |
| ! | TCTTGAATGTCAATGATAAT+AGG | - | chr5.1:1201716-1201735 | MS.gene49476:intron | 25.0% |
| ! | TGATAATCATTGTTCCTTTA+CGG | - | chr5.1:1202067-1202086 | MS.gene49476:CDS | 25.0% |
| ! | TTGAGTATGAATTTGATCAT+GGG | - | chr5.1:1200918-1200937 | MS.gene49476:CDS | 25.0% |
| ! | TTGATAGGCAGATATAATTT+GGG | - | chr5.1:1204122-1204141 | MS.gene49476:intron | 25.0% |
| ! | TTTAGCGATAATGTAATCAA+TGG | - | chr5.1:1204632-1204651 | MS.gene49476:intron | 25.0% |
| ! | TTTGAGTATGAATTTGATCA+TGG | - | chr5.1:1200917-1200936 | MS.gene49476:CDS | 25.0% |
| !! | ACAAGATTTTCAATAATTGG+TGG | - | chr5.1:1205583-1205602 | MS.gene49476:intron | 25.0% |
| !! | CAAGATTTTCAATAATTGGT+GGG | - | chr5.1:1205584-1205603 | MS.gene49476:intron | 25.0% |
| !! | CATGCTATCAGATTTTATAT+TGG | + | chr5.1:1203108-1203127 | None:intergenic | 25.0% |
| !! | GTCAAATTTTGCAATTCAAA+TGG | + | chr5.1:1203141-1203160 | None:intergenic | 25.0% |
| !! | TTTTTAACATAAGCTCTGTT+TGG | + | chr5.1:1201122-1201141 | None:intergenic | 25.0% |
| !!! | AATGATGAGTTTTATGAATG+AGG | - | chr5.1:1202825-1202844 | MS.gene49476:intron | 25.0% |
| !!! | ACTAATGTTTTTATGCACAA+AGG | - | chr5.1:1205309-1205328 | MS.gene49476:intron | 25.0% |
| !!! | ATATTTTACGTAGGATTAGT+AGG | - | chr5.1:1203634-1203653 | MS.gene49476:intron | 25.0% |
| !!! | ATTTGTTATAATACGTACTC+AGG | + | chr5.1:1202427-1202446 | None:intergenic | 25.0% |
| !!! | CAGTTTGTTAAGAATGAATT+AGG | - | chr5.1:1203192-1203211 | MS.gene49476:intron | 25.0% |
| !!! | CCATTGTAGTTTTATTTTTG+TGG | + | chr5.1:1202650-1202669 | None:intergenic | 25.0% |
| !!! | TCCAAAGTTTTAAAAGTGAA+GGG | + | chr5.1:1205221-1205240 | None:intergenic | 25.0% |
| !!! | TCTTAATTTAGGAGTATTAG+AGG | + | chr5.1:1204594-1204613 | None:intergenic | 25.0% |
| !!! | TTCCAAAGTTTTAAAAGTGA+AGG | + | chr5.1:1205222-1205241 | None:intergenic | 25.0% |
| !!! | TTGTGTATAAGCTTTTTCTA+TGG | + | chr5.1:1201075-1201094 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTTATCATTTTGC+AGG | - | chr5.1:1202205-1202224 | MS.gene49476:CDS | 25.0% |
| AAAATATCACTGACAGCAAA+AGG | - | chr5.1:1204756-1204775 | MS.gene49476:intron | 30.0% | |
| AAACTGCATCTTTAACAAAC+TGG | + | chr5.1:1203178-1203197 | None:intergenic | 30.0% | |
| AAATATTGTCAAAGCGTACA+CGG | + | chr5.1:1205079-1205098 | None:intergenic | 30.0% | |
| AACAACTTCTCATTTCCAAA+AGG | - | chr5.1:1200778-1200797 | MS.gene49476:CDS | 30.0% | |
| AACCAAAAAGACAATCAAGA+GGG | + | chr5.1:1205820-1205839 | None:intergenic | 30.0% | |
| AAGCAAGCTACACAATTTAA+AGG | + | chr5.1:1204318-1204337 | None:intergenic | 30.0% | |
| AAGTAAGATAAGGAAACCTT+AGG | - | chr5.1:1202777-1202796 | MS.gene49476:intron | 30.0% | |
| AATCTCAATGAGAAGATACT+TGG | + | chr5.1:1201819-1201838 | None:intergenic | 30.0% | |
| ACAACTTCTCATTTCCAAAA+GGG | - | chr5.1:1200779-1200798 | MS.gene49476:CDS | 30.0% | |
| ACACAGTAAGCAGTAAAAAA+AGG | + | chr5.1:1202611-1202630 | None:intergenic | 30.0% | |
| ACGATAACATCATGATGTTA+AGG | + | chr5.1:1201896-1201915 | None:intergenic | 30.0% | |
| ACTAATATAAACTTCCCTTG+AGG | - | chr5.1:1204894-1204913 | MS.gene49476:intron | 30.0% | |
| ACTGTTAAACTTAAAATGCC+GGG | - | chr5.1:1204959-1204978 | MS.gene49476:intron | 30.0% | |
| AGAATACACATTACACTAGA+AGG | + | chr5.1:1205002-1205021 | None:intergenic | 30.0% | |
| AGAATCAAACCAACTTAAAG+TGG | + | chr5.1:1201697-1201716 | None:intergenic | 30.0% | |
| AGATAACATGTTCCAAAATC+AGG | + | chr5.1:1201371-1201390 | None:intergenic | 30.0% | |
| ATAATCACGATTTACTCGTT+GGG | - | chr5.1:1203354-1203373 | MS.gene49476:intron | 30.0% | |
| ATACAATACGAAGAAGAGAA+AGG | - | chr5.1:1201644-1201663 | MS.gene49476:intron | 30.0% | |
| ATCACTCCAATCCATTTAAT+AGG | + | chr5.1:1202734-1202753 | None:intergenic | 30.0% | |
| ATGTAAATCTAACTGGTAAC+TGG | - | chr5.1:1201408-1201427 | MS.gene49476:intron | 30.0% | |
| ATTACAATTGAGCTTGCAAT+AGG | + | chr5.1:1205678-1205697 | None:intergenic | 30.0% | |
| ATTCTTTCCCAATTCTAGAT+GGG | - | chr5.1:1201755-1201774 | MS.gene49476:intron | 30.0% | |
| CTTGATAGGCAGATATAATT+TGG | - | chr5.1:1204121-1204140 | MS.gene49476:intron | 30.0% | |
| GAATACACATTACACTAGAA+GGG | + | chr5.1:1205001-1205020 | None:intergenic | 30.0% | |
| GACTGTTAAACTTAAAATGC+CGG | - | chr5.1:1204958-1204977 | MS.gene49476:intron | 30.0% | |
| GATCATAGTTGCATGAATTT+AGG | - | chr5.1:1201616-1201635 | MS.gene49476:intron | 30.0% | |
| GCTCATAATTCATTAATCGA+AGG | + | chr5.1:1205372-1205391 | None:intergenic | 30.0% | |
| GCTCATTCACAAATTTGAAA+TGG | - | chr5.1:1202447-1202466 | MS.gene49476:intron | 30.0% | |
| GGTAATACTAATGTGAATGA+TGG | - | chr5.1:1205549-1205568 | MS.gene49476:intron | 30.0% | |
| TAACCAAAAAGACAATCAAG+AGG | + | chr5.1:1205821-1205840 | None:intergenic | 30.0% | |
| TACACAATTTAAAGGATGCA+CGG | + | chr5.1:1204310-1204329 | None:intergenic | 30.0% | |
| TCATGATGTTAAGGTAATAC+AGG | + | chr5.1:1201887-1201906 | None:intergenic | 30.0% | |
| TTACAATTGAGCTTGCAATA+GGG | + | chr5.1:1205677-1205696 | None:intergenic | 30.0% | |
| TTCACTTCAAATAAACGTCT+AGG | + | chr5.1:1202877-1202896 | None:intergenic | 30.0% | |
| TTTATCTGCAACAAAACAAG+TGG | + | chr5.1:1205767-1205786 | None:intergenic | 30.0% | |
| ! | AACTAGCCTATTAAATGGAT+TGG | - | chr5.1:1202725-1202744 | MS.gene49476:intron | 30.0% |
| ! | ATTCACTTGATGAACACTTT+TGG | - | chr5.1:1202359-1202378 | MS.gene49476:intron | 30.0% |
| ! | ATTGTTGTTGAATGACAGAT+TGG | - | chr5.1:1204487-1204506 | MS.gene49476:CDS | 30.0% |
| ! | ATTTTCGTTACACTTCTTAC+TGG | - | chr5.1:1205095-1205114 | MS.gene49476:intron | 30.0% |
| ! | GAAGAATGTCATAAGCTTTT+TGG | + | chr5.1:1200951-1200970 | None:intergenic | 30.0% |
| ! | GTAGAAACTAGCCTATTAAA+TGG | - | chr5.1:1202720-1202739 | MS.gene49476:intron | 30.0% |
| ! | GTCATGTTTTGCAATTCAAA+TGG | + | chr5.1:1203252-1203271 | None:intergenic | 30.0% |
| ! | TGATGAATTTAGTACCCTTT+TGG | + | chr5.1:1200796-1200815 | None:intergenic | 30.0% |
| ! | TGCATACAATTTCCTGATTT+TGG | - | chr5.1:1201356-1201375 | MS.gene49476:intron | 30.0% |
| !!! | ACCCTTCACTTTTAAAACTT+TGG | - | chr5.1:1205217-1205236 | MS.gene49476:intron | 30.0% |
| !!! | ACTCTTTTTTCACTTGTTTC+GGG | - | chr5.1:1201261-1201280 | MS.gene49476:intron | 30.0% |
| !!! | CACTCTTTTTTCACTTGTTT+CGG | - | chr5.1:1201260-1201279 | MS.gene49476:intron | 30.0% |
| !!! | CTTGATTGTCTTTTTGGTTA+TGG | - | chr5.1:1205821-1205840 | MS.gene49476:intron | 30.0% |
| !!! | GTTCTGACTCTTTATTTTCT+AGG | - | chr5.1:1201173-1201192 | MS.gene49476:intron | 30.0% |
| !!! | GTTTTGTGCCTTTTGAAATT+TGG | - | chr5.1:1204065-1204084 | MS.gene49476:intron | 30.0% |
| AAATATCCTCAGTCCACAAA+AGG | + | chr5.1:1202239-1202258 | None:intergenic | 35.0% | |
| AACAAACTGGAAACTGTAGA+TGG | + | chr5.1:1203165-1203184 | None:intergenic | 35.0% | |
| AATTCATGCAACTATGATCC+AGG | + | chr5.1:1201615-1201634 | None:intergenic | 35.0% | |
| ACAAACTGGAAACTGTAGAT+GGG | + | chr5.1:1203164-1203183 | None:intergenic | 35.0% | |
| AGAGTATGGAATGAATGTAG+AGG | - | chr5.1:1202544-1202563 | MS.gene49476:intron | 35.0% | |
| AGCAATATAGAGACTGTAGA+TGG | - | chr5.1:1202513-1202532 | MS.gene49476:intron | 35.0% | |
| ATCTCATACGTGTTTGGAAA+AGG | - | chr5.1:1204935-1204954 | MS.gene49476:intron | 35.0% | |
| ATGATGAAAAATGGCCTCAA+GGG | + | chr5.1:1204911-1204930 | None:intergenic | 35.0% | |
| ATGTCACAAGCAATTAATCC+TGG | - | chr5.1:1201594-1201613 | MS.gene49476:intron | 35.0% | |
| CAAACATGAAGAATGGAATG+AGG | + | chr5.1:1202188-1202207 | None:intergenic | 35.0% | |
| CAAGTTTCTGTTAGCAATGT+GGG | + | chr5.1:1203038-1203057 | None:intergenic | 35.0% | |
| CATAATCACGATTTACTCGT+TGG | - | chr5.1:1203353-1203372 | MS.gene49476:intron | 35.0% | |
| CATTCTTTCCCAATTCTAGA+TGG | - | chr5.1:1201754-1201773 | MS.gene49476:intron | 35.0% | |
| CCTAGTCTAGAAAAGAAAAG+CGG | - | chr5.1:1204354-1204373 | MS.gene49476:intron | 35.0% | |
| CTAGTCTAGAAAAGAAAAGC+GGG | - | chr5.1:1204355-1204374 | MS.gene49476:intron | 35.0% | |
| GAATTGAGAACAACATGTGT+TGG | - | chr5.1:1202894-1202913 | MS.gene49476:intron | 35.0% | |
| GAGTTTGACAACATTGGATT+TGG | - | chr5.1:1203712-1203731 | MS.gene49476:intron | 35.0% | |
| GATATAAGCTTCATTAGCGA+AGG | + | chr5.1:1204533-1204552 | None:intergenic | 35.0% | |
| GATTCCTTAGAAAAATCCCA+AGG | - | chr5.1:1204725-1204744 | MS.gene49476:intron | 35.0% | |
| TAAAAAAAGGTCTAGCTGAC+TGG | + | chr5.1:1202598-1202617 | None:intergenic | 35.0% | |
| TACAATTGAGCTTGCAATAG+GGG | + | chr5.1:1205676-1205695 | None:intergenic | 35.0% | |
| TAGAATTGGGAAAGAATGAG+TGG | + | chr5.1:1201752-1201771 | None:intergenic | 35.0% | |
| TAGTCTAGAAAAGAAAAGCG+GGG | - | chr5.1:1204356-1204375 | MS.gene49476:intron | 35.0% | |
| TCAAGTTTCTGTTAGCAATG+TGG | + | chr5.1:1203039-1203058 | None:intergenic | 35.0% | |
| TCCTTATCTTACTTGCAACA+GGG | + | chr5.1:1202771-1202790 | None:intergenic | 35.0% | |
| TCTCATACGTGTTTGGAAAA+GGG | - | chr5.1:1204936-1204955 | MS.gene49476:intron | 35.0% | |
| TCTCTTTCTCTTAAACTTGC+TGG | + | chr5.1:1202480-1202499 | None:intergenic | 35.0% | |
| TGAAGAATGTTTACCTCATC+AGG | + | chr5.1:1201210-1201229 | None:intergenic | 35.0% | |
| TTCAAAGGCAACACAATGAA+GGG | + | chr5.1:1203001-1203020 | None:intergenic | 35.0% | |
| TTCATTGTGTTGCCTTTGAA+GGG | - | chr5.1:1203001-1203020 | MS.gene49476:intron | 35.0% | |
| TTCCTTATCTTACTTGCAAC+AGG | + | chr5.1:1202772-1202791 | None:intergenic | 35.0% | |
| TTCTAGACTAGGAATGTAGT+CGG | + | chr5.1:1204346-1204365 | None:intergenic | 35.0% | |
| TTCTTTCCCAATTCTAGATG+GGG | - | chr5.1:1201756-1201775 | MS.gene49476:intron | 35.0% | |
| ! | AGTTCAAACTGAAGTGCTAT+GGG | - | chr5.1:1203314-1203333 | MS.gene49476:intron | 35.0% |
| ! | GATATTTTCAGACTTGCCTT+GGG | + | chr5.1:1204744-1204763 | None:intergenic | 35.0% |
| ! | TAGTTCAAACTGAAGTGCTA+TGG | - | chr5.1:1203313-1203332 | MS.gene49476:intron | 35.0% |
| ! | TATATTCTGCGCTGTGATTT+TGG | + | chr5.1:1204207-1204226 | None:intergenic | 35.0% |
| ! | TGATATTTTCAGACTTGCCT+TGG | + | chr5.1:1204745-1204764 | None:intergenic | 35.0% |
| ! | TTCTAAGGAATCAGAAGCAT+AGG | + | chr5.1:1204717-1204736 | None:intergenic | 35.0% |
| ! | TTTTCCAAACACGTATGAGA+TGG | + | chr5.1:1204936-1204955 | None:intergenic | 35.0% |
| !! | AGGATCGTGTTTTAGATTCT+AGG | - | chr5.1:1203453-1203472 | MS.gene49476:intron | 35.0% |
| !! | GACATTGATTTGTCACACAA+AGG | + | chr5.1:1202674-1202693 | None:intergenic | 35.0% |
| !! | GTTTTGTTGCAGATAAATCC+TGG | - | chr5.1:1205770-1205789 | MS.gene49476:intron | 35.0% |
| !! | TTTCAAGTTAACCTTACAGC+AGG | - | chr5.1:1202116-1202135 | MS.gene49476:CDS | 35.0% |
| !!! | TTTATTTTTGTGGCCACCTA+TGG | + | chr5.1:1202640-1202659 | None:intergenic | 35.0% |
| AATCAATGGAAACAGGACAC+AGG | - | chr5.1:1204646-1204665 | MS.gene49476:intron | 40.0% | |
| AATCGTGATTATGACGACGA+TGG | + | chr5.1:1203346-1203365 | None:intergenic | 40.0% | |
| AATTAACCTACCCAAAGAGC+AGG | - | chr5.1:1204236-1204255 | MS.gene49476:intron | 40.0% | |
| AATTTCTCTCACCTGCTGTA+AGG | + | chr5.1:1202130-1202149 | None:intergenic | 40.0% | |
| ACCCTGTTGCAAGTAAGATA+AGG | - | chr5.1:1202767-1202786 | MS.gene49476:intron | 40.0% | |
| AGATGGAGATGTAGAGAGTA+TGG | - | chr5.1:1202530-1202549 | MS.gene49476:intron | 40.0% | |
| AGTCTAGAAAAGAAAAGCGG+GGG | - | chr5.1:1204357-1204376 | MS.gene49476:intron | 40.0% | |
| ATCGAACCTTAAACCTTGAG+AGG | + | chr5.1:1205396-1205415 | None:intergenic | 40.0% | |
| ATGCACGGACAAAATGTTAG+TGG | + | chr5.1:1204295-1204314 | None:intergenic | 40.0% | |
| CAAACTGGAAACTGTAGATG+GGG | + | chr5.1:1203163-1203182 | None:intergenic | 40.0% | |
| CAACACAATGAAGGGTTTGA+AGG | + | chr5.1:1202993-1203012 | None:intergenic | 40.0% | |
| CAGCTGCATCTTTAACAAAC+TGG | + | chr5.1:1203289-1203308 | None:intergenic | 40.0% | |
| CATGATGAAAAATGGCCTCA+AGG | + | chr5.1:1204912-1204931 | None:intergenic | 40.0% | |
| CGGTATCGCCATCTTAATTT+AGG | + | chr5.1:1204605-1204624 | None:intergenic | 40.0% | |
| CTGACTCATCCTTACAAAAC+CGG | + | chr5.1:1203083-1203102 | None:intergenic | 40.0% | |
| CTTACTGTGTTCTGTACCAT+AGG | - | chr5.1:1202621-1202640 | MS.gene49476:intron | 40.0% | |
| CTTCAAAGGCAACACAATGA+AGG | + | chr5.1:1203002-1203021 | None:intergenic | 40.0% | |
| CTTCATTGTGTTGCCTTTGA+AGG | - | chr5.1:1203000-1203019 | MS.gene49476:intron | 40.0% | |
| GAAATCAACTATATGGCGTC+AGG | + | chr5.1:1202009-1202028 | None:intergenic | 40.0% | |
| GAGATGGCCATGATGAAAAA+TGG | + | chr5.1:1204920-1204939 | None:intergenic | 40.0% | |
| GATCACATTCTTTCACTGGA+CGG | - | chr5.1:1202283-1202302 | MS.gene49476:intron | 40.0% | |
| GATCTCGAGTTTGACAACAT+TGG | - | chr5.1:1203706-1203725 | MS.gene49476:intron | 40.0% | |
| GCTCTATTTAACCTACGAAG+GGG | + | chr5.1:1202576-1202595 | None:intergenic | 40.0% | |
| GGATGAAAATTCTCCTCCAT+TGG | + | chr5.1:1205851-1205870 | None:intergenic | 40.0% | |
| GGCTCTATTTAACCTACGAA+GGG | + | chr5.1:1202577-1202596 | None:intergenic | 40.0% | |
| GTGATCTGCAGAAGAATACA+AGG | + | chr5.1:1202269-1202288 | None:intergenic | 40.0% | |
| TATCTGTACATCGTCTACCA+AGG | - | chr5.1:1202162-1202181 | MS.gene49476:CDS | 40.0% | |
| TATTTAACCTACGAAGGGGT+TGG | + | chr5.1:1202572-1202591 | None:intergenic | 40.0% | |
| TCAGGAAATTGTATGCACCA+TGG | + | chr5.1:1201353-1201372 | None:intergenic | 40.0% | |
| TCATTAGCGAAGGATCATGT+TGG | + | chr5.1:1204523-1204542 | None:intergenic | 40.0% | |
| TGAATTATGAGCTCCTCTCA+AGG | - | chr5.1:1205380-1205399 | MS.gene49476:intron | 40.0% | |
| TGCAGATCACATTCTTTCAC+TGG | - | chr5.1:1202279-1202298 | MS.gene49476:intron | 40.0% | |
| TGGAAATTCTGCCTTCATTG+TGG | - | chr5.1:1202914-1202933 | MS.gene49476:intron | 40.0% | |
| TGGTAGACGATGTACAGATA+AGG | + | chr5.1:1202162-1202181 | None:intergenic | 40.0% | |
| ! | ATCTAACTGGTAACTGGTCT+AGG | - | chr5.1:1201414-1201433 | MS.gene49476:intron | 40.0% |
| ! | ATTCTCCCCAATGCCAATTT+TGG | - | chr5.1:1205414-1205433 | MS.gene49476:intron | 40.0% |
| ! | CATCAACCCCATCTAGAATT+GGG | + | chr5.1:1201765-1201784 | None:intergenic | 40.0% |
| ! | CTTGCCTTGGGATTTTTCTA+AGG | + | chr5.1:1204732-1204751 | None:intergenic | 40.0% |
| ! | GACAAAATGTTAGTGGATGC+TGG | + | chr5.1:1204288-1204307 | None:intergenic | 40.0% |
| ! | GACCCTCTTGATTGTCTTTT+TGG | - | chr5.1:1205815-1205834 | MS.gene49476:intron | 40.0% |
| ! | TCATTGTGTTGCCTTTGAAG+GGG | - | chr5.1:1203002-1203021 | MS.gene49476:intron | 40.0% |
| ! | TGGCTCTATTTAACCTACGA+AGG | + | chr5.1:1202578-1202597 | None:intergenic | 40.0% |
| !! | CATGGACAGGTTTGTCATTT+TGG | - | chr5.1:1201292-1201311 | MS.gene49476:intron | 40.0% |
| !! | CCGCTTTTCTTTTCTAGACT+AGG | + | chr5.1:1204357-1204376 | None:intergenic | 40.0% |
| !! | TTCTCTTAAACTTGCTGGAG+AGG | + | chr5.1:1202475-1202494 | None:intergenic | 40.0% |
| !! | TTTTGGTTATGGTGCTCCAA+TGG | - | chr5.1:1205832-1205851 | MS.gene49476:intron | 40.0% |
| !!! | CTTGAGGCCATTTTTCATCA+TGG | - | chr5.1:1204910-1204929 | MS.gene49476:intron | 40.0% |
| AAGTCGCAAGTTCGCAACAA+AGG | + | chr5.1:1202036-1202055 | None:intergenic | 45.0% | |
| AATACCCCAAACAAACCCTC+AGG | - | chr5.1:1205872-1205891 | MS.gene49476:intron | 45.0% | |
| ACAGCAAAAGGACAACTCGT+GGG | - | chr5.1:1204768-1204787 | MS.gene49476:intron | 45.0% | |
| ACTGTGTTCTGTACCATAGG+TGG | - | chr5.1:1202624-1202643 | MS.gene49476:intron | 45.0% | |
| AGATCCTACCTTGGATTACG+AGG | + | chr5.1:1203691-1203710 | None:intergenic | 45.0% | |
| AGCCCACCAAAATTGGCATT+GGG | + | chr5.1:1205423-1205442 | None:intergenic | 45.0% | |
| ATACCCCAAACAAACCCTCA+GGG | - | chr5.1:1205873-1205892 | MS.gene49476:intron | 45.0% | |
| ATCCTACCTTGGATTACGAG+GGG | + | chr5.1:1203689-1203708 | None:intergenic | 45.0% | |
| ATCCTATCAGGGATGCAACA+TGG | + | chr5.1:1203412-1203431 | None:intergenic | 45.0% | |
| ATGGCCATCTCATACGTGTT+TGG | - | chr5.1:1204929-1204948 | MS.gene49476:intron | 45.0% | |
| CAAAGAGCAGGAGTGAAAGT+GGG | - | chr5.1:1204248-1204267 | MS.gene49476:intron | 45.0% | |
| CACTTTCACTCCTGCTCTTT+GGG | + | chr5.1:1204249-1204268 | None:intergenic | 45.0% | |
| CAGAAAGTAGGAGAGACCAT+AGG | + | chr5.1:1204412-1204431 | None:intergenic | 45.0% | |
| CCAAACTAGCCCACCAAAAT+TGG | + | chr5.1:1205430-1205449 | None:intergenic | 45.0% | |
| GACTAAATCCACCCCTTCAA+AGG | + | chr5.1:1203016-1203035 | None:intergenic | 45.0% | |
| GATCCTACCTTGGATTACGA+GGG | + | chr5.1:1203690-1203709 | None:intergenic | 45.0% | |
| GGCAAAATTGACACCTGATG+AGG | - | chr5.1:1201194-1201213 | MS.gene49476:intron | 45.0% | |
| GTTCCTTTACGGCAGTAACT+GGG | - | chr5.1:1202078-1202097 | MS.gene49476:CDS | 45.0% | |
| TAGCCCACCAAAATTGGCAT+TGG | + | chr5.1:1205424-1205443 | None:intergenic | 45.0% | |
| TCAAACTCGAGATCCTACCT+TGG | + | chr5.1:1203700-1203719 | None:intergenic | 45.0% | |
| TCTGACAAAACCTCAGAACC+AGG | + | chr5.1:1205791-1205810 | None:intergenic | 45.0% | |
| TGAAGAATGGAATGAGGCCT+TGG | + | chr5.1:1202182-1202201 | None:intergenic | 45.0% | |
| TGAGCTCCTCTCAAGGTTTA+AGG | - | chr5.1:1205387-1205406 | MS.gene49476:intron | 45.0% | |
| TGTTCCTTTACGGCAGTAAC+TGG | - | chr5.1:1202077-1202096 | MS.gene49476:CDS | 45.0% | |
| TGTTGCATCCCTGATAGGAT+CGG | - | chr5.1:1203412-1203431 | MS.gene49476:intron | 45.0% | |
| ! | AGCAGACTCTTCTTTTGCAG+TGG | - | chr5.1:1205528-1205547 | MS.gene49476:intron | 45.0% |
| ! | CTGCATGCTCTGAGTTTGAA+AGG | + | chr5.1:1205958-1205977 | None:intergenic | 45.0% |
| ! | GAGGGTTTGTTTGGGGTATT+AGG | + | chr5.1:1205872-1205891 | None:intergenic | 45.0% |
| ! | GCATCAACCCCATCTAGAAT+TGG | + | chr5.1:1201766-1201785 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr5.1:1203074-1203093 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr5.1:1203071-1203090 | MS.gene49476:intron | 45.0% |
| !! | CGACGCAATAGTTGTTTTGC+CGG | - | chr5.1:1201449-1201468 | MS.gene49476:intron | 45.0% |
| !! | CGGTTTTGTAAGGATGAGTC+AGG | - | chr5.1:1203081-1203100 | MS.gene49476:intron | 45.0% |
| !! | GCAGATAAATCCTGGTTCTG+AGG | - | chr5.1:1205778-1205797 | MS.gene49476:intron | 45.0% |
| !! | TCCCCAATGCCAATTTTGGT+GGG | - | chr5.1:1205418-1205437 | MS.gene49476:intron | 45.0% |
| !!! | ATTTTGGCTGTTTGCTCGCT+GGG | - | chr5.1:1204096-1204115 | MS.gene49476:intron | 45.0% |
| !!! | CCAATTTTGGTGGGCTAGTT+TGG | - | chr5.1:1205427-1205446 | MS.gene49476:intron | 45.0% |
| !!! | TGGTTCTGAGGTTTTGTCAG+AGG | - | chr5.1:1205790-1205809 | MS.gene49476:intron | 45.0% |
| !! | AAAAAAAAAAATAAAAGTAA+TGG | - | chr5.1:1203961-1203980 | MS.gene49476:intron | 5.0% |
| !!! | TTAATTATTTTTTCAATTTA+AGG | - | chr5.1:1203556-1203575 | MS.gene49476:intron | 5.0% |
| AATGCCGCGATTAAGCGAGT+AGG | + | chr5.1:1202946-1202965 | None:intergenic | 50.0% | |
| ACTCTACCAAGTGCGTCCTA+AGG | + | chr5.1:1202796-1202815 | None:intergenic | 50.0% | |
| AGGAAACCTTAGGACGCACT+TGG | - | chr5.1:1202787-1202806 | MS.gene49476:intron | 50.0% | |
| AGGGATGCAACATGGAGATG+GGG | + | chr5.1:1203404-1203423 | None:intergenic | 50.0% | |
| ATGCCGCGATTAAGCGAGTA+GGG | + | chr5.1:1202945-1202964 | None:intergenic | 50.0% | |
| CAGGGATGCAACATGGAGAT+GGG | + | chr5.1:1203405-1203424 | None:intergenic | 50.0% | |
| CCAAAGAGCAGGAGTGAAAG+TGG | - | chr5.1:1204247-1204266 | MS.gene49476:intron | 50.0% | |
| CCACTTTCACTCCTGCTCTT+TGG | + | chr5.1:1204250-1204269 | None:intergenic | 50.0% | |
| CTCCATGTTGCATCCCTGAT+AGG | - | chr5.1:1203407-1203426 | MS.gene49476:intron | 50.0% | |
| CTGTATCCCCGATCCTATCA+GGG | + | chr5.1:1203423-1203442 | None:intergenic | 50.0% | |
| GACAGCAAAAGGACAACTCG+TGG | - | chr5.1:1204767-1204786 | MS.gene49476:intron | 50.0% | |
| GCCCACCAAAATTGGCATTG+GGG | + | chr5.1:1205422-1205441 | None:intergenic | 50.0% | |
| GGACGGCAGTACATTACAGA+AGG | - | chr5.1:1202300-1202319 | MS.gene49476:intron | 50.0% | |
| GGGTTTGAAGGCTGCAATGA+AGG | + | chr5.1:1202981-1203000 | None:intergenic | 50.0% | |
| GTTGCATCCCTGATAGGATC+GGG | - | chr5.1:1203413-1203432 | MS.gene49476:intron | 50.0% | |
| TCAGGGATGCAACATGGAGA+TGG | + | chr5.1:1203406-1203425 | None:intergenic | 50.0% | |
| TCCTACCTTGGATTACGAGG+GGG | + | chr5.1:1203688-1203707 | None:intergenic | 50.0% | |
| TCTCCCAGTTACTGCCGTAA+AGG | + | chr5.1:1202084-1202103 | None:intergenic | 50.0% | |
| TCTGTATCCCCGATCCTATC+AGG | + | chr5.1:1203424-1203443 | None:intergenic | 50.0% | |
| TGGTTATGGTGCTCCAATGG+AGG | - | chr5.1:1205835-1205854 | MS.gene49476:intron | 50.0% | |
| TTCACTCCTGCTCTTTGGGT+AGG | + | chr5.1:1204245-1204264 | None:intergenic | 50.0% | |
| TTGCATCCCTGATAGGATCG+GGG | - | chr5.1:1203414-1203433 | MS.gene49476:intron | 50.0% | |
| TTTCACCCCCTCGTAATCCA+AGG | - | chr5.1:1203680-1203699 | MS.gene49476:intron | 50.0% | |
| ! | CTCCCCAATGCCAATTTTGG+TGG | - | chr5.1:1205417-1205436 | MS.gene49476:intron | 50.0% |
| ! | TTGTGTTGCCTTTGAAGGGG+TGG | - | chr5.1:1203005-1203024 | MS.gene49476:intron | 50.0% |
| !! | AAACCGGCTTGTAAGGTGAG+AGG | + | chr5.1:1203067-1203086 | None:intergenic | 50.0% |
| !! | AACCGGCTTGTAAGGTGAGA+GGG | + | chr5.1:1203066-1203085 | None:intergenic | 50.0% |
| !!! | CATTTTGGCTGTTTGCTCGC+TGG | - | chr5.1:1204095-1204114 | MS.gene49476:intron | 50.0% |
| ACCCCCTCGTAATCCAAGGT+AGG | - | chr5.1:1203684-1203703 | MS.gene49476:intron | 55.0% | |
| ACGGCAGTAACTGGGAGACT+TGG | - | chr5.1:1202086-1202105 | MS.gene49476:CDS | 55.0% | |
| AGAGGATCCAACCCCTTCGT+AGG | - | chr5.1:1202562-1202581 | MS.gene49476:intron | 55.0% | |
| AGCCCTCTCACCTTACAAGC+CGG | - | chr5.1:1203061-1203080 | MS.gene49476:intron | 55.0% | |
| GAGATGGGGGGACAGATCAT+AGG | + | chr5.1:1203390-1203409 | None:intergenic | 55.0% | |
| GATCCATGCATCGCACGAGT+CGG | - | chr5.1:1203876-1203895 | MS.gene49476:intron | 55.0% | |
| GGATGCAACATGGAGATGGG+GGG | + | chr5.1:1203402-1203421 | None:intergenic | 55.0% | |
| GGGATGCAACATGGAGATGG+GGG | + | chr5.1:1203403-1203422 | None:intergenic | 55.0% | |
| GGGGATACAGACATCTCTGC+AGG | - | chr5.1:1203433-1203452 | MS.gene49476:intron | 55.0% | |
| TGCCGCGATTAAGCGAGTAG+GGG | + | chr5.1:1202944-1202963 | None:intergenic | 55.0% | |
| TTGCTCGCTGGGAGCTTGAT+AGG | - | chr5.1:1204107-1204126 | MS.gene49476:intron | 55.0% | |
| ! | CGTCCCTGAGGGTTTGTTTG+GGG | + | chr5.1:1205879-1205898 | None:intergenic | 55.0% |
| ! | GCGTCCCTGAGGGTTTGTTT+GGG | + | chr5.1:1205880-1205899 | None:intergenic | 55.0% |
| ! | TGCGTCCCTGAGGGTTTGTT+TGG | + | chr5.1:1205881-1205900 | None:intergenic | 55.0% |
| !! | CTGCTGCCTTTTGTGGACTG+AGG | - | chr5.1:1202230-1202249 | MS.gene49476:intron | 55.0% |
| !! | TTGTTTCGGGTGCTGCTGCA+TGG | - | chr5.1:1201274-1201293 | MS.gene49476:intron | 55.0% |
| CCTCGATGATGCGTCCCTGA+GGG | + | chr5.1:1205890-1205909 | None:intergenic | 60.0% | |
| CGCCCCTACTCGCTTAATCG+CGG | - | chr5.1:1202939-1202958 | MS.gene49476:intron | 60.0% | |
| CGCGATTAAGCGAGTAGGGG+CGG | + | chr5.1:1202941-1202960 | None:intergenic | 60.0% | |
| GAAGACATCGCCGCAGGCAT+CGG | - | chr5.1:1205915-1205934 | MS.gene49476:intron | 60.0% | |
| GATCACGCATCCGATGCCTG+CGG | + | chr5.1:1205928-1205947 | None:intergenic | 60.0% | |
| GCCATAGAAGACATCGCCGC+AGG | - | chr5.1:1205909-1205928 | MS.gene49476:intron | 60.0% | |
| GCCTGCGGCGATGTCTTCTA+TGG | + | chr5.1:1205913-1205932 | None:intergenic | 60.0% | |
| GGCGTGCAACTTTCTCAGCC+CGG | + | chr5.1:1204980-1204999 | None:intergenic | 60.0% | |
| GTAGGGGCGGACCACAATGA+AGG | + | chr5.1:1202928-1202947 | None:intergenic | 60.0% | |
| ! | GCAGGAGCTGCTGCCTTTTG+TGG | - | chr5.1:1202223-1202242 | MS.gene49476:intron | 60.0% |
| !! | TCACCGACTCGTGCGATGCA+TGG | + | chr5.1:1203882-1203901 | None:intergenic | 60.0% |
| CCCTCAGGGACGCATCATCG+AGG | - | chr5.1:1205887-1205906 | MS.gene49476:intron | 65.0% | |
| GCCTCGATGATGCGTCCCTG+AGG | + | chr5.1:1205891-1205910 | None:intergenic | 65.0% | |
| !! | TCGGGTGCTGCTGCATGGAC+AGG | - | chr5.1:1201279-1201298 | MS.gene49476:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 1200753 | 1205982 | 1200753 | ID=MS.gene49476 |
| chr5.1 | mRNA | 1200753 | 1205982 | 1200753 | ID=MS.gene49476.t1;Parent=MS.gene49476 |
| chr5.1 | exon | 1205935 | 1205982 | 1205935 | ID=MS.gene49476.t1.exon1;Parent=MS.gene49476.t1 |
| chr5.1 | CDS | 1205935 | 1205982 | 1205935 | ID=cds.MS.gene49476.t1;Parent=MS.gene49476.t1 |
| chr5.1 | exon | 1205435 | 1205540 | 1205435 | ID=MS.gene49476.t1.exon2;Parent=MS.gene49476.t1 |
| chr5.1 | CDS | 1205435 | 1205540 | 1205435 | ID=cds.MS.gene49476.t1;Parent=MS.gene49476.t1 |
| chr5.1 | exon | 1204598 | 1204642 | 1204598 | ID=MS.gene49476.t1.exon3;Parent=MS.gene49476.t1 |
| chr5.1 | CDS | 1204598 | 1204642 | 1204598 | ID=cds.MS.gene49476.t1;Parent=MS.gene49476.t1 |
| chr5.1 | exon | 1204400 | 1204508 | 1204400 | ID=MS.gene49476.t1.exon4;Parent=MS.gene49476.t1 |
| chr5.1 | CDS | 1204400 | 1204508 | 1204400 | ID=cds.MS.gene49476.t1;Parent=MS.gene49476.t1 |
| chr5.1 | exon | 1201930 | 1202230 | 1201930 | ID=MS.gene49476.t1.exon5;Parent=MS.gene49476.t1 |
| chr5.1 | CDS | 1201930 | 1202230 | 1201930 | ID=cds.MS.gene49476.t1;Parent=MS.gene49476.t1 |
| chr5.1 | exon | 1200753 | 1200953 | 1200753 | ID=MS.gene49476.t1.exon6;Parent=MS.gene49476.t1 |
| chr5.1 | CDS | 1200753 | 1200953 | 1200753 | ID=cds.MS.gene49476.t1;Parent=MS.gene49476.t1 |
| Gene Sequence |
| Protein sequence |
